Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:50:10 (5665): wrapper (7.7.26015): starting
14:50:10 (5665): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 14:50:10] Arguments: --nthreads 8
[2025-10-13 14:50:10] Threads: 8
[2025-10-13 14:50:10] Checking for CVMFS
[2025-10-13 14:50:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 14:50:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 14:50:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 14:50:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 14:50:10] 2.11.2.0 14729 54689 120632 151670 0 1 14699421 18432000 1 130560 0 51100145 99.977 2325243 37524 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 14:50:10] CVMFS is ok
[2025-10-13 14:50:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 14:50:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 14:50:10] Further information can be found at the LHC@home message board.
[2025-10-13 14:50:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 14:50:10] Checking for apptainer binary...
[2025-10-13 14:50:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 14:50:10] Running /usr/bin/apptainer --version
[2025-10-13 14:50:10] apptainer version 1.3.2-1.el7
[2025-10-13 14:50:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 14:50:12] c-206-30.aglt2.org
[2025-10-13 14:50:12] apptainer works
[2025-10-13 14:50:12] Set ATHENA_PROC_NUMBER=8
[2025-10-13 14:50:12] Set ATHENA_CORE_NUMBER=8
[2025-10-13 14:50:12] Starting ATLAS job with PandaID=6838364753
[2025-10-13 14:50:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 16:35:50]  *** The last 200 lines of the pilot log: ***
[2025-10-13 16:35:50] 2025-10-13 20:35:17,764 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1657.0
[2025-10-13 16:35:50] 2025-10-13 20:35:17,768 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838364753/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 16:35:50] 2025-10-13 20:35:17,769 | INFO     | extracted standard info from prmon json
[2025-10-13 16:35:50] 2025-10-13 20:35:17,771 | INFO     | monitor loop #484: job 0:6838364753 is in state 'finished'
[2025-10-13 16:35:50] 2025-10-13 20:35:17,773 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 16:35:50] 2025-10-13 20:35:17,774 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 16:35:50] 2025-10-13 20:35:17,774 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 16:35:50] 2025-10-13 20:35:17,775 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 16:35:50] 2025-10-13 20:35:17,775 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 16:35:50] 2025-10-13 20:35:17,778 | INFO     | fitting pss+swap vs Time
[2025-10-13 16:35:50] 2025-10-13 20:35:17,778 | INFO     | sum of square deviations: 338804492.0
[2025-10-13 16:35:50] 2025-10-13 20:35:17,779 | INFO     | sum of deviations: 2571087597.000001
[2025-10-13 16:35:50] 2025-10-13 20:35:17,779 | INFO     | mean x: 1760384567.0
[2025-10-13 16:35:50] 2025-10-13 20:35:17,779 | INFO     | mean y: 2509327.1844660193
[2025-10-13 16:35:50] 2025-10-13 20:35:17,780 | INFO     | -- intersect: -13356531160.873518
[2025-10-13 16:35:50] 2025-10-13 20:35:17,780 | INFO     | intersect: -13356531160.873518
[2025-10-13 16:35:50] 2025-10-13 20:35:17,780 | INFO     | chi2: 1.4334787480859366
[2025-10-13 16:35:50] 2025-10-13 20:35:17,781 | INFO     | sum of square deviations: 291817564.5
[2025-10-13 16:35:50] 2025-10-13 20:35:17,781 | INFO     | sum of deviations: 2501834571.5000014
[2025-10-13 16:35:50] 2025-10-13 20:35:17,781 | INFO     | mean x: 1760384414.5
[2025-10-13 16:35:50] 2025-10-13 20:35:17,781 | INFO     | mean y: 2509108.4795918367
[2025-10-13 16:35:50] 2025-10-13 20:35:17,781 | INFO     | -- intersect: -15089764706.059383
[2025-10-13 16:35:50] 2025-10-13 20:35:17,782 | INFO     | intersect: -15089764706.059383
[2025-10-13 16:35:50] 2025-10-13 20:35:17,782 | INFO     | chi2: 1.4351912806492444
[2025-10-13 16:35:50] 2025-10-13 20:35:17,782 | INFO     | current chi2=1.4351912806492444 (change=-0.11946689587093676 %)
[2025-10-13 16:35:50] 2025-10-13 20:35:17,782 | INFO     | right removable region: 97
[2025-10-13 16:35:50] 2025-10-13 20:35:17,782 | INFO     | sum of square deviations: 291817564.5
[2025-10-13 16:35:50] 2025-10-13 20:35:17,783 | INFO     | sum of deviations: -11190033370.0
[2025-10-13 16:35:50] 2025-10-13 20:35:17,783 | INFO     | mean x: 1760384719.5
[2025-10-13 16:35:50] 2025-10-13 20:35:17,783 | INFO     | mean y: 2552887.9795918367
[2025-10-13 16:35:50] 2025-10-13 20:35:17,783 | INFO     | -- intersect: 67506247495.92733
[2025-10-13 16:35:50] 2025-10-13 20:35:17,783 | INFO     | intersect: 67506247495.92733
[2025-10-13 16:35:50] 2025-10-13 20:35:17,783 | INFO     | chi2: 0.09081524469519399
[2025-10-13 16:35:50] 2025-10-13 20:35:17,784 | INFO     | current chi2=0.09081524469519399 (change=93.66469542597295 %)
[2025-10-13 16:35:50] 2025-10-13 20:35:17,784 | INFO     | sum of square deviations: 249388862.0
[2025-10-13 16:35:50] 2025-10-13 20:35:17,784 | INFO     | sum of deviations: -8742801332.000002
[2025-10-13 16:35:50] 2025-10-13 20:35:17,784 | INFO     | mean x: 1760384872.0
[2025-10-13 16:35:50] 2025-10-13 20:35:17,784 | INFO     | mean y: 2544038.11827957
[2025-10-13 16:35:50] 2025-10-13 20:35:17,785 | INFO     | -- intersect: 61716187062.61811
[2025-10-13 16:35:50] 2025-10-13 20:35:17,785 | INFO     | intersect: 61716187062.61811
[2025-10-13 16:35:50] 2025-10-13 20:35:17,785 | INFO     | chi2: 0.08739082295087605
[2025-10-13 16:35:50] 2025-10-13 20:35:17,785 | INFO     | current chi2=0.08739082295087605 (change=3.7707565021835596 %)
[2025-10-13 16:35:50] 2025-10-13 20:35:17,785 | INFO     | left removable region: 20
[2025-10-13 16:35:50] 2025-10-13 20:35:17,785 | INFO     | sum of square deviations: 141539398.0
[2025-10-13 16:35:50] 2025-10-13 20:35:17,786 | INFO     | sum of deviations: -2276243060.0
[2025-10-13 16:35:50] 2025-10-13 20:35:17,786 | INFO     | mean x: 1760384994.0
[2025-10-13 16:35:50] 2025-10-13 20:35:17,786 | INFO     | mean y: 2516985.311688312
[2025-10-13 16:35:50] 2025-10-13 20:35:17,786 | INFO     | -- intersect: 28313108821.52002
[2025-10-13 16:35:50] 2025-10-13 20:35:17,786 | INFO     | intersect: 28313108821.52002
[2025-10-13 16:35:50] 2025-10-13 20:35:17,786 | INFO     | chi2: 0.043228072617460964
[2025-10-13 16:35:50] 2025-10-13 20:35:17,786 | INFO     | -- intersect: 28313108821.52002
[2025-10-13 16:35:50] 2025-10-13 20:35:17,787 | INFO     | current memory leak: -16.08 B/s (using 77 data points, chi2=0.04)
[2025-10-13 16:35:50] 2025-10-13 20:35:17,787 | INFO     | could have reported an average CPU frequency of 1838 MHz (7 samples)
[2025-10-13 16:35:50] 2025-10-13 20:35:17,787 | INFO     | ..............................
[2025-10-13 16:35:50] 2025-10-13 20:35:17,787 | INFO     | . Timing measurements:
[2025-10-13 16:35:50] 2025-10-13 20:35:17,787 | INFO     | . get job = 0 s
[2025-10-13 16:35:50] 2025-10-13 20:35:17,787 | INFO     | . initial setup = 2 s
[2025-10-13 16:35:50] 2025-10-13 20:35:17,788 | INFO     | . payload setup = 7 s
[2025-10-13 16:35:50] 2025-10-13 20:35:17,788 | INFO     | . stage-in = 0 s
[2025-10-13 16:35:50] 2025-10-13 20:35:17,788 | INFO     | . payload execution = 6252 s
[2025-10-13 16:35:50] 2025-10-13 20:35:17,788 | INFO     | . stage-out = 0 s
[2025-10-13 16:35:50] 2025-10-13 20:35:17,788 | INFO     | . log creation = 0 s
[2025-10-13 16:35:50] 2025-10-13 20:35:17,788 | INFO     | ..............................
[2025-10-13 16:35:50] 2025-10-13 20:35:18,290 | INFO     | 
[2025-10-13 16:35:50] 2025-10-13 20:35:18,291 | INFO     | job summary report
[2025-10-13 16:35:50] 2025-10-13 20:35:18,291 | INFO     | --------------------------------------------------
[2025-10-13 16:35:50] 2025-10-13 20:35:18,291 | INFO     | PanDA job id: 6838364753
[2025-10-13 16:35:50] 2025-10-13 20:35:18,291 | INFO     | task id: 46676269
[2025-10-13 16:35:50] 2025-10-13 20:35:18,291 | INFO     | errors: (none)
[2025-10-13 16:35:50] 2025-10-13 20:35:18,291 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 16:35:50] 2025-10-13 20:35:18,292 | INFO     | pilot state: finished 
[2025-10-13 16:35:50] 2025-10-13 20:35:18,292 | INFO     | transexitcode: 0
[2025-10-13 16:35:50] 2025-10-13 20:35:18,292 | INFO     | exeerrorcode: 0
[2025-10-13 16:35:50] 2025-10-13 20:35:18,292 | INFO     | exeerrordiag: 
[2025-10-13 16:35:50] 2025-10-13 20:35:18,292 | INFO     | exitcode: 0
[2025-10-13 16:35:50] 2025-10-13 20:35:18,292 | INFO     | exitmsg: OK
[2025-10-13 16:35:50] 2025-10-13 20:35:18,292 | INFO     | cpuconsumptiontime: 47017 s
[2025-10-13 16:35:50] 2025-10-13 20:35:18,293 | INFO     | nevents: 400
[2025-10-13 16:35:50] 2025-10-13 20:35:18,293 | INFO     | neventsw: 0
[2025-10-13 16:35:50] 2025-10-13 20:35:18,293 | INFO     | pid: 15838
[2025-10-13 16:35:50] 2025-10-13 20:35:18,293 | INFO     | pgrp: 15838
[2025-10-13 16:35:50] 2025-10-13 20:35:18,293 | INFO     | corecount: 8
[2025-10-13 16:35:50] 2025-10-13 20:35:18,293 | INFO     | event service: False
[2025-10-13 16:35:50] 2025-10-13 20:35:18,294 | INFO     | sizes: {0: 2348627, 1: 2348882, 6: 2349144, 12: 2349172, 6264: 2376147, 6265: 2385145, 6268: 2385329, 6275: 2385523}
[2025-10-13 16:35:50] 2025-10-13 20:35:18,294 | INFO     | --------------------------------------------------
[2025-10-13 16:35:50] 2025-10-13 20:35:18,294 | INFO     | 
[2025-10-13 16:35:50] 2025-10-13 20:35:18,294 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 16:35:50] 2025-10-13 20:35:18,411 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 16:35:50] 2025-10-13 20:35:18,412 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 16:35:50] 2025-10-13 20:35:18,412 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 16:35:50] 2025-10-13 20:35:18,412 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 16:35:50] 2025-10-13 20:35:18,412 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 16:35:50] 2025-10-13 20:35:18,412 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 16:35:50] 2025-10-13 20:35:18,413 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 16:35:50] 2025-10-13 20:35:18,413 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 16:35:50] 2025-10-13 20:35:18,413 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 16:35:50] 2025-10-13 20:35:18,413 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 16:35:50] 2025-10-13 20:35:18,413 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 16:35:50] 2025-10-13 20:35:18,413 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 16:35:50] 2025-10-13 20:35:18,414 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 16:35:50] 2025-10-13 20:35:18,414 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 16:35:50] 2025-10-13 20:35:18,414 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 16:35:50] 2025-10-13 20:35:18,414 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 16:35:50] 2025-10-13 20:35:18,414 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 16:35:50] 2025-10-13 20:35:18,414 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 16:35:50] 2025-10-13 20:35:18,414 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 16:35:50] 2025-10-13 20:35:18,415 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 16:35:50] 2025-10-13 20:35:18,415 | INFO     | job 6838364753 has completed (purged errors)
[2025-10-13 16:35:50] 2025-10-13 20:35:18,415 | INFO     | overall cleanup function is called
[2025-10-13 16:35:50] 2025-10-13 20:35:19,420 | INFO     | --- collectZombieJob: --- 10, [15838]
[2025-10-13 16:35:50] 2025-10-13 20:35:19,421 | INFO     | zombie collector waiting for pid 15838
[2025-10-13 16:35:50] 2025-10-13 20:35:19,421 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 16:35:50] 2025-10-13 20:35:19,421 | INFO     | collected zombie processes
[2025-10-13 16:35:50] 2025-10-13 20:35:19,421 | INFO     | will attempt to kill all subprocesses of pid=15838
[2025-10-13 16:35:50] 2025-10-13 20:35:19,522 | INFO     | process IDs to be killed: [15838] (in reverse order)
[2025-10-13 16:35:50] 2025-10-13 20:35:19,571 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 16:35:50] 2025-10-13 20:35:19,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 16:35:50] 2025-10-13 20:35:19,575 | INFO     | did not find any defunct processes belonging to 15838
[2025-10-13 16:35:50] 2025-10-13 20:35:19,578 | INFO     | did not find any defunct processes belonging to 15838
[2025-10-13 16:35:50] 2025-10-13 20:35:19,579 | INFO     | ready for new job
[2025-10-13 16:35:50] 2025-10-13 20:35:19,579 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 16:35:50] 2025-10-13 20:35:19,580 | INFO     | ***************************************
[2025-10-13 16:35:50] 2025-10-13 20:35:19,581 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 16:35:50] 2025-10-13 20:35:19,581 | INFO     | ***************************************
[2025-10-13 16:35:50] 2025-10-13 20:35:19,581 | INFO     | 
[2025-10-13 16:35:50] 2025-10-13 20:35:19,582 | INFO     | architecture information:
[2025-10-13 16:35:50] 2025-10-13 20:35:19,582 | INFO     | executing command: cat /etc/os-release
[2025-10-13 16:35:50] 2025-10-13 20:35:19,595 | INFO     | cat /etc/os-release:
[2025-10-13 16:35:50] NAME="CentOS Linux"
[2025-10-13 16:35:50] VERSION="7 (Core)"
[2025-10-13 16:35:50] ID="centos"
[2025-10-13 16:35:50] ID_LIKE="rhel fedora"
[2025-10-13 16:35:50] VERSION_ID="7"
[2025-10-13 16:35:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 16:35:50] ANSI_COLOR="0;31"
[2025-10-13 16:35:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 16:35:50] HOME_URL="https://www.centos.org/"
[2025-10-13 16:35:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 16:35:50] 
[2025-10-13 16:35:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 16:35:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 16:35:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 16:35:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 16:35:50] 
[2025-10-13 16:35:50] 2025-10-13 20:35:19,595 | INFO     | ***************************************
[2025-10-13 16:35:50] 2025-10-13 20:35:20,098 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 16:35:50] 2025-10-13 20:35:20,113 | INFO     | sufficient remaining disk space (29189210112 B)
[2025-10-13 16:35:50] 2025-10-13 20:35:20,114 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 16:35:50] 2025-10-13 20:35:20,114 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 16:35:50] 2025-10-13 20:35:20,114 | INFO     | update_server=False
[2025-10-13 16:35:50] 2025-10-13 20:35:20,114 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 16:35:50] 2025-10-13 20:35:20,276 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 16:35:50] 2025-10-13 20:35:20,277 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 16:35:50] 2025-10-13 20:35:20,277 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:35:50] 2025-10-13 20:35:20,277 | INFO     | will abort loop
[2025-10-13 16:35:50] 2025-10-13 20:35:20,376 | INFO     | all job control threads have been joined
[2025-10-13 16:35:50] 2025-10-13 20:35:20,772 | INFO     | all data control threads have been joined
[2025-10-13 16:35:50] 2025-10-13 20:35:20,954 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 16:35:50] 2025-10-13 20:35:20,994 | INFO     | all payload control threads have been joined
[2025-10-13 16:35:50] 2025-10-13 20:35:21,120 | INFO     | [job] retrieve thread has finished
[2025-10-13 16:35:50] 2025-10-13 20:35:21,178 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 16:35:50] 2025-10-13 20:35:21,256 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 16:35:50] 2025-10-13 20:35:21,262 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 16:35:50] 2025-10-13 20:35:21,283 | INFO     | [job] job monitor thread has finished
[2025-10-13 16:35:50] 2025-10-13 20:35:21,382 | INFO     | [job] control thread has finished
[2025-10-13 16:35:50] 2025-10-13 20:35:21,401 | INFO     | [data] copytool_in thread has finished
[2025-10-13 16:35:50] 2025-10-13 20:35:21,514 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 16:35:50] 2025-10-13 20:35:21,777 | INFO     | [data] control thread has finished
[2025-10-13 16:35:50] 2025-10-13 20:35:21,999 | INFO     | [payload] control thread has finished
[2025-10-13 16:35:50] 2025-10-13 20:35:22,171 | INFO     | [payload] validate_post thread has finished
[2025-10-13 16:35:50] 2025-10-13 20:35:22,337 | INFO     | [job] validate thread has finished
[2025-10-13 16:35:50] 2025-10-13 20:35:22,558 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 16:35:50] 2025-10-13 20:35:22,646 | INFO     | [payload] failed_post thread has finished
[2025-10-13 16:35:50] 2025-10-13 20:35:22,881 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:35:50] 2025-10-13 20:35:22,959 | INFO     | [data] copytool_out thread has finished
[2025-10-13 16:35:50] 2025-10-13 20:35:23,736 [wrapper] supervise_pilot (15 min periods counter: 8)
[2025-10-13 16:35:50] 2025-10-13 20:35:23,887 | INFO     | [job] queue monitor thread has finished
[2025-10-13 16:35:50] 2025-10-13 20:35:25,268 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 16:35:50] 2025-10-13 20:35:34,913 | INFO     | [monitor] cgroup control has ended
[2025-10-13 16:35:50] 2025-10-13 20:35:35,840 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140045350881088)>', '<ExcThread(monitor, started 140044773873408)>']
[2025-10-13 16:35:50] 2025-10-13 20:35:40,860 | INFO     | all workflow threads have been joined
[2025-10-13 16:35:50] 2025-10-13 20:35:40,861 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 16:35:50] 2025-10-13 20:35:40,861 | INFO     | traces error code: 0
[2025-10-13 16:35:50] 2025-10-13 20:35:40,861 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 16:35:50] 2025-10-13 20:35:50,072 | INFO     | PID=9359 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 16:35:50] 2025-10-13 20:35:50,072 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 16:35:50] 2025-10-13 20:35:50,072 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 16:35:50] 2025-10-13 20:35:50,072 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 16:35:50] 2025-10-13 20:35:50,072 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 16:35:50] 2025-10-13 20:35:50,073 | INFO     | [monitor] control thread has ended
[2025-10-13 16:35:50] 2025-10-13 20:35:50,164 [wrapper] ==== pilot stdout END ====
[2025-10-13 16:35:50] 2025-10-13 20:35:50,168 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 16:35:50] 2025-10-13 20:35:50,171 [wrapper] pilotpid: 9359
[2025-10-13 16:35:50] 2025-10-13 20:35:50,175 [wrapper] Pilot exit status: 0
[2025-10-13 16:35:50] 2025-10-13 20:35:50,190 [wrapper] pandaids: 6838364753
[2025-10-13 16:35:50] 2025-10-13 20:35:50,231 [wrapper] cleanup supervisor_pilot 16204 9360
[2025-10-13 16:35:50] 2025-10-13 20:35:50,235 [wrapper] Test setup, not cleaning
[2025-10-13 16:35:50] 2025-10-13 20:35:50,239 [wrapper] apfmon messages muted
[2025-10-13 16:35:50] 2025-10-13 20:35:50,242 [wrapper] ==== wrapper stdout END ====
[2025-10-13 16:35:50] 2025-10-13 20:35:50,246 [wrapper] ==== wrapper stderr END ====
[2025-10-13 16:35:50]  *** Error codes and diagnostics ***
[2025-10-13 16:35:50]     "exeErrorCode": 0,
[2025-10-13 16:35:50]     "exeErrorDiag": "",
[2025-10-13 16:35:50]     "pilotErrorCode": 0,
[2025-10-13 16:35:50]     "pilotErrorDiag": "",
[2025-10-13 16:35:50]  *** Listing of results directory ***
[2025-10-13 16:35:50] total 409224
[2025-10-13 16:35:50] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 06:52 pilot3.tar.gz
[2025-10-13 16:35:50] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 06:58 queuedata.json
[2025-10-13 16:35:50] -rwx------ 1 boincer umatlas     36292 Oct 11 07:00 runpilot2-wrapper.sh
[2025-10-13 16:35:50] -rw-r--r-- 1 boincer umatlas       100 Oct 13 14:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 16:35:50] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 14:50 run_atlas
[2025-10-13 16:35:50] -rw-r--r-- 1 boincer umatlas       105 Oct 13 14:50 job.xml
[2025-10-13 16:35:50] -rw-r--r-- 2 boincer umatlas 218624368 Oct 13 14:50 EVNT.46676267._002220.pool.root.1
[2025-10-13 16:35:50] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 14:50 start_atlas.sh
[2025-10-13 16:35:50] drwxrwx--x 2 boincer umatlas      4096 Oct 13 14:50 shared
[2025-10-13 16:35:50] -rw-r--r-- 2 boincer umatlas    569674 Oct 13 14:50 input.tar.gz
[2025-10-13 16:35:50] -rw-r--r-- 1 boincer umatlas         0 Oct 13 14:50 boinc_lockfile
[2025-10-13 16:35:50] -rw-r--r-- 1 boincer umatlas      2548 Oct 13 14:50 pandaJob.out
[2025-10-13 16:35:50] -rw------- 1 boincer umatlas    972799 Oct 13 14:50 agis_schedconf.cvmfs.json
[2025-10-13 16:35:50] -rw------- 1 boincer umatlas   1560580 Oct 13 14:50 agis_ddmendpoints.agis.ALL.json
[2025-10-13 16:35:50] drwx------ 5 boincer umatlas      4096 Oct 13 14:50 pilot3
[2025-10-13 16:35:50] -rw-r--r-- 1 boincer umatlas      5951 Oct 13 16:31 init_data.xml
[2025-10-13 16:35:50] -rw------- 1 boincer umatlas 194047359 Oct 13 16:34 HITS.46676269._056334.pool.root.1
[2025-10-13 16:35:50] -rw-r--r-- 1 boincer umatlas       529 Oct 13 16:34 boinc_task_state.xml
[2025-10-13 16:35:50] -rw------- 1 boincer umatlas      1047 Oct 13 16:35 memory_monitor_summary.json
[2025-10-13 16:35:50] -rw------- 1 boincer umatlas    337926 Oct 13 16:35 log.46676269._056334.job.log.tgz.1
[2025-10-13 16:35:50] -rw------- 1 boincer umatlas        95 Oct 13 16:35 pilot_heartbeat.json
[2025-10-13 16:35:50] -rw------- 1 boincer umatlas      7850 Oct 13 16:35 heartbeat.json
[2025-10-13 16:35:50] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 16:35 boinc_mmap_file
[2025-10-13 16:35:50] -rw-r--r-- 1 boincer umatlas        27 Oct 13 16:35 wrapper_checkpoint.txt
[2025-10-13 16:35:50] -rw------- 1 boincer umatlas       744 Oct 13 16:35 pilotlog.txt
[2025-10-13 16:35:50] -rw------- 1 boincer umatlas    904084 Oct 13 16:35 log.46676269._056334.job.log.1
[2025-10-13 16:35:50] -rw------- 1 boincer umatlas       357 Oct 13 16:35 output.list
[2025-10-13 16:35:50] -rw-r--r-- 1 boincer umatlas       620 Oct 13 16:35 runtime_log
[2025-10-13 16:35:50] -rw------- 1 boincer umatlas   1259520 Oct 13 16:35 result.tar.gz
[2025-10-13 16:35:50] -rw------- 1 boincer umatlas       659 Oct 13 16:35 UN7LDmJWmR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmJiRMDmBu4Rwm.diag
[2025-10-13 16:35:50] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 16:35 runtime_log.err
[2025-10-13 16:35:50] -rw-r--r-- 1 boincer umatlas     21102 Oct 13 16:35 stderr.txt
[2025-10-13 16:35:50] HITS file was successfully produced:
[2025-10-13 16:35:50] -rw------- 1 boincer umatlas 194047359 Oct 13 16:34 shared/HITS.pool.root.1
[2025-10-13 16:35:50]  *** Contents of shared directory: ***
[2025-10-13 16:35:50] total 404812
[2025-10-13 16:35:50] -rw-r--r-- 2 boincer umatlas 218624368 Oct 13 14:50 ATLAS.root_0
[2025-10-13 16:35:50] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 14:50 start_atlas.sh
[2025-10-13 16:35:50] -rw-r--r-- 2 boincer umatlas    569674 Oct 13 14:50 input.tar.gz
[2025-10-13 16:35:50] -rw------- 1 boincer umatlas 194047359 Oct 13 16:34 HITS.pool.root.1
[2025-10-13 16:35:50] -rw------- 1 boincer umatlas   1259520 Oct 13 16:35 result.tar.gz
16:35:51 (5665): run_atlas exited; CPU time 46810.627112
16:35:51 (5665): called boinc_finish(0)

</stderr_txt>
]]>

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