Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:46:24 (3003532): wrapper (7.7.26015): starting
14:46:24 (3003532): wrapper: running run_atlas (--nthreads 10)
[2025-10-13 14:46:24] Arguments: --nthreads 10
[2025-10-13 14:46:24] Threads: 10
[2025-10-13 14:46:24] Checking for CVMFS
[2025-10-13 14:46:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 14:46:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 14:46:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 14:46:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 14:46:25] 2.13.2.0 6179 7498 113556 151670 2 25 29033754 40960000 17210 16776704 0 18785330 99.929 3745971 38275 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 14:46:25] CVMFS is ok
[2025-10-13 14:46:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 14:46:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 14:46:25] Further information can be found at the LHC@home message board.
[2025-10-13 14:46:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 14:46:25] Checking for apptainer binary...
[2025-10-13 14:46:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 14:46:25] Running /usr/bin/apptainer --version
[2025-10-13 14:46:25] apptainer version 1.4.3-1.el9
[2025-10-13 14:46:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 14:46:25] c-211-33-2.aglt2.org
[2025-10-13 14:46:25] apptainer works
[2025-10-13 14:46:25] Set ATHENA_PROC_NUMBER=10
[2025-10-13 14:46:25] Set ATHENA_CORE_NUMBER=10
[2025-10-13 14:46:25] Starting ATLAS job with PandaID=6840225594
[2025-10-13 14:46:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 16:20:58]  *** The last 200 lines of the pilot log: ***
[2025-10-13 16:20:58] ]
[2025-10-13 16:20:58] 2025-10-13 20:20:14,827 | INFO     | transferring file log.46676269._082661.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6840225594/log.46676269._082661.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 16:20:58] 2025-10-13 20:20:14,827 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6840225594/log.46676269._082661.job.log.tgz.1 /tmp/boinchome/slots/1/log.46676269._082661.job
[2025-10-13 16:20:58] 2025-10-13 20:20:14,856 | INFO     | adding to output.list: log.46676269._082661.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/e3/log.46676269._082661.job.log.tg
[2025-10-13 16:20:58] 2025-10-13 20:20:14,857 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 16:20:58] 2025-10-13 20:20:14,857 | INFO     | summary of transferred files:
[2025-10-13 16:20:58] 2025-10-13 20:20:14,858 | INFO     |  -- lfn=log.46676269._082661.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 16:20:58] 2025-10-13 20:20:14,858 | INFO     | stage-out finished correctly
[2025-10-13 16:20:58] 2025-10-13 20:20:15,449 | WARNING  | process 3027012 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 16:20:58] 2025-10-13 20:20:15,449 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840225594/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 16:20:58] 2025-10-13 20:20:15,535 | INFO     | time since job start (5615s) is within the limit (172800.0s)
[2025-10-13 16:20:58] 2025-10-13 20:20:15,584 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 16:20:58] 2025-10-13 20:20:15,922 | INFO     | number of running child processes to parent process 3027012: 1
[2025-10-13 16:20:58] 2025-10-13 20:20:15,923 | INFO     | maximum number of monitored processes: 6
[2025-10-13 16:20:58] 2025-10-13 20:20:16,413 | INFO     | job 6840225594 has state=finished
[2025-10-13 16:20:58] 2025-10-13 20:20:16,413 | INFO     | preparing for final server update for job 6840225594 in state='finished'
[2025-10-13 16:20:58] 2025-10-13 20:20:16,414 | INFO     | this job has now completed (state=finished)
[2025-10-13 16:20:58] 2025-10-13 20:20:16,414 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 16:20:58] 2025-10-13 20:20:16,414 | INFO     | log transfer has been attempted: DONE
[2025-10-13 16:20:58] 2025-10-13 20:20:16,414 | INFO     | job 6840225594 has finished - writing final server update
[2025-10-13 16:20:58] 2025-10-13 20:20:16,415 | INFO     | total number of processed events: 400 (read)
[2025-10-13 16:20:58] 2025-10-13 20:20:16,416 | INFO     | executing command: lscpu
[2025-10-13 16:20:58] 2025-10-13 20:20:16,493 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 16:20:58] 2025-10-13 20:20:17,067 | INFO     | PID=3009550 has CPU usage=14.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 16:20:58] 2025-10-13 20:20:17,068 | INFO     | .. there are 14 such processes running
[2025-10-13 16:20:58] 2025-10-13 20:20:18,068 | INFO     | time since job start (5618s) is within the limit (172800.0s)
[2025-10-13 16:20:58] 2025-10-13 20:20:18,431 | INFO     | monitor loop #391: job 0:6840225594 is in state 'finished'
[2025-10-13 16:20:58] 2025-10-13 20:20:18,431 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 16:20:58] 2025-10-13 20:20:20,075 | INFO     | time since job start (5620s) is within the limit (172800.0s)
[2025-10-13 16:20:58] 2025-10-13 20:20:20,952 | INFO     | monitor loop #392: job 0:6840225594 is in state 'finished'
[2025-10-13 16:20:58] 2025-10-13 20:20:20,952 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 16:20:58] 2025-10-13 20:20:22,081 | INFO     | time since job start (5622s) is within the limit (172800.0s)
[2025-10-13 16:20:58] 2025-10-13 20:20:23,462 | INFO     | monitor loop #393: job 0:6840225594 is in state 'finished'
[2025-10-13 16:20:58] 2025-10-13 20:20:23,462 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 16:20:58] 2025-10-13 20:20:24,087 | INFO     | time since job start (5624s) is within the limit (172800.0s)
[2025-10-13 16:20:58] 2025-10-13 20:20:24,356 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 16:20:58] 2025-10-13 20:20:24,370 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2542.844572916666
[2025-10-13 16:20:58] 2025-10-13 20:20:24,389 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840225594/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 16:20:58] 2025-10-13 20:20:24,390 | INFO     | extracted standard info from prmon json
[2025-10-13 16:20:58] 2025-10-13 20:20:24,390 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 16:20:58] 2025-10-13 20:20:24,390 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 16:20:58] 2025-10-13 20:20:24,391 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 16:20:58] 2025-10-13 20:20:24,391 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 16:20:58] 2025-10-13 20:20:24,393 | INFO     | fitting pss+swap vs Time
[2025-10-13 16:20:58] 2025-10-13 20:20:24,394 | INFO     | sum of square deviations: 190386495.8117648
[2025-10-13 16:20:58] 2025-10-13 20:20:24,394 | INFO     | sum of deviations: -5739838265.023532
[2025-10-13 16:20:58] 2025-10-13 20:20:24,395 | INFO     | mean x: 1760384099.0470588
[2025-10-13 16:20:58] 2025-10-13 20:20:24,395 | INFO     | mean y: 2676656.505882353
[2025-10-13 16:20:58] 2025-10-13 20:20:24,395 | INFO     | -- intersect: 53075348485.28637
[2025-10-13 16:20:58] 2025-10-13 20:20:24,395 | INFO     | intersect: 53075348485.28637
[2025-10-13 16:20:58] 2025-10-13 20:20:24,395 | INFO     | chi2: 0.0565314562522009
[2025-10-13 16:20:58] 2025-10-13 20:20:24,396 | INFO     | -- intersect: 53075348485.28637
[2025-10-13 16:20:58] 2025-10-13 20:20:24,396 | INFO     | current memory leak: -30.15 B/s (using 85 data points, chi2=0.06)
[2025-10-13 16:20:58] 2025-10-13 20:20:24,396 | INFO     | could have reported an average CPU frequency of 2555 MHz (7 samples)
[2025-10-13 16:20:58] 2025-10-13 20:20:24,396 | INFO     | ..............................
[2025-10-13 16:20:58] 2025-10-13 20:20:24,396 | INFO     | . Timing measurements:
[2025-10-13 16:20:58] 2025-10-13 20:20:24,397 | INFO     | . get job = 0 s
[2025-10-13 16:20:58] 2025-10-13 20:20:24,397 | INFO     | . initial setup = 2 s
[2025-10-13 16:20:58] 2025-10-13 20:20:24,397 | INFO     | . payload setup = 7 s
[2025-10-13 16:20:58] 2025-10-13 20:20:24,397 | INFO     | . stage-in = 0 s
[2025-10-13 16:20:58] 2025-10-13 20:20:24,397 | INFO     | . payload execution = 5584 s
[2025-10-13 16:20:58] 2025-10-13 20:20:24,397 | INFO     | . stage-out = 0 s
[2025-10-13 16:20:58] 2025-10-13 20:20:24,397 | INFO     | . log creation = 0 s
[2025-10-13 16:20:58] 2025-10-13 20:20:24,397 | INFO     | ..............................
[2025-10-13 16:20:58] 2025-10-13 20:20:24,830 | INFO     | 
[2025-10-13 16:20:58] 2025-10-13 20:20:24,830 | INFO     | job summary report
[2025-10-13 16:20:58] 2025-10-13 20:20:24,830 | INFO     | --------------------------------------------------
[2025-10-13 16:20:58] 2025-10-13 20:20:24,831 | INFO     | PanDA job id: 6840225594
[2025-10-13 16:20:58] 2025-10-13 20:20:24,831 | INFO     | task id: 46676269
[2025-10-13 16:20:58] 2025-10-13 20:20:24,831 | INFO     | errors: (none)
[2025-10-13 16:20:58] 2025-10-13 20:20:24,831 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 16:20:58] 2025-10-13 20:20:24,831 | INFO     | pilot state: finished 
[2025-10-13 16:20:58] 2025-10-13 20:20:24,831 | INFO     | transexitcode: 0
[2025-10-13 16:20:58] 2025-10-13 20:20:24,831 | INFO     | exeerrorcode: 0
[2025-10-13 16:20:58] 2025-10-13 20:20:24,831 | INFO     | exeerrordiag: 
[2025-10-13 16:20:58] 2025-10-13 20:20:24,831 | INFO     | exitcode: 0
[2025-10-13 16:20:58] 2025-10-13 20:20:24,831 | INFO     | exitmsg: OK
[2025-10-13 16:20:58] 2025-10-13 20:20:24,831 | INFO     | cpuconsumptiontime: 46356 s
[2025-10-13 16:20:58] 2025-10-13 20:20:24,831 | INFO     | nevents: 400
[2025-10-13 16:20:58] 2025-10-13 20:20:24,832 | INFO     | neventsw: 0
[2025-10-13 16:20:58] 2025-10-13 20:20:24,832 | INFO     | pid: 3027012
[2025-10-13 16:20:58] 2025-10-13 20:20:24,832 | INFO     | pgrp: 3027012
[2025-10-13 16:20:58] 2025-10-13 20:20:24,832 | INFO     | corecount: 10
[2025-10-13 16:20:58] 2025-10-13 20:20:24,832 | INFO     | event service: False
[2025-10-13 16:20:58] 2025-10-13 20:20:24,832 | INFO     | sizes: {0: 2348857, 1: 2348857, 7: 2349147, 11: 2349175, 5596: 2375767, 5597: 2384949, 5606: 2385087}
[2025-10-13 16:20:58] 2025-10-13 20:20:24,832 | INFO     | --------------------------------------------------
[2025-10-13 16:20:58] 2025-10-13 20:20:24,832 | INFO     | 
[2025-10-13 16:20:58] 2025-10-13 20:20:24,832 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 16:20:58] 2025-10-13 20:20:24,858 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 16:20:58] 2025-10-13 20:20:24,858 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 16:20:58] 2025-10-13 20:20:24,859 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 16:20:58] 2025-10-13 20:20:24,859 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 16:20:58] 2025-10-13 20:20:24,859 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 16:20:58] 2025-10-13 20:20:24,859 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 16:20:58] 2025-10-13 20:20:24,859 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 16:20:58] 2025-10-13 20:20:24,859 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 16:20:58] 2025-10-13 20:20:24,859 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 16:20:58] 2025-10-13 20:20:24,859 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 16:20:58] 2025-10-13 20:20:24,859 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 16:20:58] 2025-10-13 20:20:24,859 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 16:20:58] 2025-10-13 20:20:24,860 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 16:20:58] 2025-10-13 20:20:24,860 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 16:20:58] 2025-10-13 20:20:24,860 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 16:20:58] 2025-10-13 20:20:24,860 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 16:20:58] 2025-10-13 20:20:24,860 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 16:20:58] 2025-10-13 20:20:24,860 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 16:20:58] 2025-10-13 20:20:24,860 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 16:20:58] 2025-10-13 20:20:24,860 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 16:20:58] 2025-10-13 20:20:24,860 | INFO     | job 6840225594 has completed (purged errors)
[2025-10-13 16:20:58] 2025-10-13 20:20:24,861 | INFO     | overall cleanup function is called
[2025-10-13 16:20:58] 2025-10-13 20:20:25,870 | INFO     | --- collectZombieJob: --- 10, [3027012]
[2025-10-13 16:20:58] 2025-10-13 20:20:25,871 | INFO     | zombie collector waiting for pid 3027012
[2025-10-13 16:20:58] 2025-10-13 20:20:25,871 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 16:20:58] 2025-10-13 20:20:25,871 | INFO     | collected zombie processes
[2025-10-13 16:20:58] 2025-10-13 20:20:25,871 | INFO     | will attempt to kill all subprocesses of pid=3027012
[2025-10-13 16:20:58] 2025-10-13 20:20:26,311 | INFO     | process IDs to be killed: [3027012] (in reverse order)
[2025-10-13 16:20:58] 2025-10-13 20:20:26,452 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 16:20:58] 2025-10-13 20:20:26,453 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 16:20:58] 2025-10-13 20:20:26,467 | INFO     | did not find any defunct processes belonging to 3027012
[2025-10-13 16:20:58] 2025-10-13 20:20:26,484 | INFO     | did not find any defunct processes belonging to 3027012
[2025-10-13 16:20:58] 2025-10-13 20:20:26,485 | INFO     | ready for new job
[2025-10-13 16:20:58] 2025-10-13 20:20:26,485 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 16:20:58] 2025-10-13 20:20:26,488 | INFO     | ***************************************
[2025-10-13 16:20:58] 2025-10-13 20:20:26,488 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 16:20:58] 2025-10-13 20:20:26,488 | INFO     | ***************************************
[2025-10-13 16:20:58] 2025-10-13 20:20:26,489 | INFO     | 
[2025-10-13 16:20:58] 2025-10-13 20:20:26,496 | INFO     | architecture information:
[2025-10-13 16:20:58] 2025-10-13 20:20:26,497 | INFO     | executing command: cat /etc/os-release
[2025-10-13 16:20:58] 2025-10-13 20:20:26,518 | INFO     | cat /etc/os-release:
[2025-10-13 16:20:58] NAME="CentOS Linux"
[2025-10-13 16:20:58] VERSION="7 (Core)"
[2025-10-13 16:20:58] ID="centos"
[2025-10-13 16:20:58] ID_LIKE="rhel fedora"
[2025-10-13 16:20:58] VERSION_ID="7"
[2025-10-13 16:20:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 16:20:58] ANSI_COLOR="0;31"
[2025-10-13 16:20:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 16:20:58] HOME_URL="https://www.centos.org/"
[2025-10-13 16:20:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 16:20:58] 
[2025-10-13 16:20:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 16:20:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 16:20:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 16:20:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 16:20:58] 
[2025-10-13 16:20:58] 2025-10-13 20:20:26,518 | INFO     | ***************************************
[2025-10-13 16:20:58] 2025-10-13 20:20:27,022 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 16:20:58] 2025-10-13 20:20:27,046 | INFO     | sufficient remaining disk space (129289420800 B)
[2025-10-13 16:20:58] 2025-10-13 20:20:27,047 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 16:20:58] 2025-10-13 20:20:27,047 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 16:20:58] 2025-10-13 20:20:27,047 | INFO     | update_server=False
[2025-10-13 16:20:58] 2025-10-13 20:20:27,047 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 16:20:58] 2025-10-13 20:20:27,048 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 16:20:58] 2025-10-13 20:20:27,048 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:20:58] 2025-10-13 20:20:27,048 | INFO     | aborting loop
[2025-10-13 16:20:58] 2025-10-13 20:20:27,712 | INFO     | all data control threads have been joined
[2025-10-13 16:20:58] 2025-10-13 20:20:27,996 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 16:20:58] 2025-10-13 20:20:28,035 | INFO     | all payload control threads have been joined
[2025-10-13 16:20:58] 2025-10-13 20:20:28,052 | INFO     | [job] retrieve thread has finished
[2025-10-13 16:20:58] 2025-10-13 20:20:28,053 | INFO     | [job] job monitor thread has finished
[2025-10-13 16:20:58] 2025-10-13 20:20:28,402 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 16:20:58] 2025-10-13 20:20:28,522 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 16:20:58] 2025-10-13 20:20:28,564 | INFO     | all job control threads have been joined
[2025-10-13 16:20:58] 2025-10-13 20:20:28,617 | INFO     | [job] validate thread has finished
[2025-10-13 16:20:58] 2025-10-13 20:20:28,718 | INFO     | [data] control thread has finished
[2025-10-13 16:20:58] 2025-10-13 20:20:28,789 | INFO     | [data] copytool_in thread has finished
[2025-10-13 16:20:58] 2025-10-13 20:20:28,849 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 16:20:58] 2025-10-13 20:20:29,041 | INFO     | [payload] control thread has finished
[2025-10-13 16:20:58] 2025-10-13 20:20:29,406 | INFO     | [payload] validate_post thread has finished
[2025-10-13 16:20:58] 2025-10-13 20:20:29,529 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:20:58] 2025-10-13 20:20:29,544 | INFO     | [payload] failed_post thread has finished
[2025-10-13 16:20:58] 2025-10-13 20:20:29,570 | INFO     | [job] control thread has finished
[2025-10-13 16:20:58] 2025-10-13 20:20:30,001 | INFO     | [data] copytool_out thread has finished
[2025-10-13 16:20:58] 2025-10-13 20:20:30,535 | INFO     | [job] queue monitor thread has finished
[2025-10-13 16:20:58] 2025-10-13 20:20:31,054 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 16:20:58] 2025-10-13 20:20:37,202 | INFO     | job.realtimelogging is not enabled
[2025-10-13 16:20:58] 2025-10-13 20:20:38,207 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 16:20:58] 2025-10-13 20:20:48,977 | INFO     | [monitor] cgroup control has ended
[2025-10-13 16:20:58] 2025-10-13 20:20:49,893 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140507438221120)>', '<ExcThread(monitor, started 140506927441664)>']
[2025-10-13 16:20:58] 2025-10-13 20:20:54,918 | INFO     | all workflow threads have been joined
[2025-10-13 16:20:58] 2025-10-13 20:20:54,918 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 16:20:58] 2025-10-13 20:20:54,919 | INFO     | traces error code: 0
[2025-10-13 16:20:58] 2025-10-13 20:20:54,919 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 16:20:58] 2025-10-13 20:20:57,619 | INFO     | PID=3009550 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 16:20:58] 2025-10-13 20:20:57,619 | INFO     | .. there are 14 such processes running
[2025-10-13 16:20:58] 2025-10-13 20:20:57,619 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 16:20:58] 2025-10-13 20:20:57,619 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 16:20:58] 2025-10-13 20:20:57,620 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 16:20:58] 2025-10-13 20:20:57,620 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 16:20:58] 2025-10-13 20:20:57,620 | INFO     | [monitor] control thread has ended
[2025-10-13 16:20:58] 2025-10-13 20:20:57,886 [wrapper] ==== pilot stdout END ====
[2025-10-13 16:20:58] 2025-10-13 20:20:57,889 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 16:20:58] 2025-10-13 20:20:57,892 [wrapper] pilotpid: 3009550
[2025-10-13 16:20:58] 2025-10-13 20:20:57,896 [wrapper] Pilot exit status: 0
[2025-10-13 16:20:58] 2025-10-13 20:20:57,907 [wrapper] pandaids: 6840225594
[2025-10-13 16:20:58] 2025-10-13 20:20:57,982 [wrapper] cleanup supervisor_pilot 3185609 3009551
[2025-10-13 16:20:58] 2025-10-13 20:20:57,987 [wrapper] Test setup, not cleaning
[2025-10-13 16:20:58] 2025-10-13 20:20:57,990 [wrapper] apfmon messages muted
[2025-10-13 16:20:58] 2025-10-13 20:20:57,993 [wrapper] ==== wrapper stdout END ====
[2025-10-13 16:20:58] 2025-10-13 20:20:57,996 [wrapper] ==== wrapper stderr END ====
[2025-10-13 16:20:58]  *** Error codes and diagnostics ***
[2025-10-13 16:20:58]     "exeErrorCode": 0,
[2025-10-13 16:20:58]     "exeErrorDiag": "",
[2025-10-13 16:20:58]     "pilotErrorCode": 0,
[2025-10-13 16:20:58]     "pilotErrorDiag": "",
[2025-10-13 16:20:58]  *** Listing of results directory ***
[2025-10-13 16:20:58] total 415088
[2025-10-13 16:20:58] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-13 16:20:58] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 11:47 queuedata.json
[2025-10-13 16:20:58] -rwx------. 1 boincer umatlas     36292 Oct 12 11:49 runpilot2-wrapper.sh
[2025-10-13 16:20:58] -rw-r--r--. 1 boincer umatlas       100 Oct 13 14:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 16:20:58] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 14:46 run_atlas
[2025-10-13 16:20:58] -rw-r--r--. 1 boincer umatlas       105 Oct 13 14:46 job.xml
[2025-10-13 16:20:58] -rw-r--r--. 2 boincer umatlas 221153153 Oct 13 14:46 EVNT.46676267._004588.pool.root.1
[2025-10-13 16:20:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 14:46 start_atlas.sh
[2025-10-13 16:20:58] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 14:46 shared
[2025-10-13 16:20:58] -rw-r--r--. 2 boincer umatlas    569677 Oct 13 14:46 input.tar.gz
[2025-10-13 16:20:58] -rw-r--r--. 1 boincer umatlas         0 Oct 13 14:46 boinc_lockfile
[2025-10-13 16:20:58] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 14:46 pandaJob.out
[2025-10-13 16:20:58] -rw-------. 1 boincer umatlas    972799 Oct 13 14:46 agis_schedconf.cvmfs.json
[2025-10-13 16:20:58] -rw-------. 1 boincer umatlas   1560580 Oct 13 14:46 agis_ddmendpoints.agis.ALL.json
[2025-10-13 16:20:58] drwx------. 5 boincer umatlas      4096 Oct 13 14:46 pilot3
[2025-10-13 16:20:58] -rw-------. 1 boincer umatlas 197637265 Oct 13 16:19 HITS.46676269._082661.pool.root.1
[2025-10-13 16:20:58] -rw-r--r--. 1 boincer umatlas       529 Oct 13 16:19 boinc_task_state.xml
[2025-10-13 16:20:58] -rw-------. 1 boincer umatlas      1045 Oct 13 16:20 memory_monitor_summary.json
[2025-10-13 16:20:58] -rw-------. 1 boincer umatlas        95 Oct 13 16:20 pilot_heartbeat.json
[2025-10-13 16:20:58] -rw-------. 1 boincer umatlas    384273 Oct 13 16:20 log.46676269._082661.job.log.tgz.1
[2025-10-13 16:20:58] -rw-------. 1 boincer umatlas      7846 Oct 13 16:20 heartbeat.json
[2025-10-13 16:20:58] -rw-r--r--. 1 boincer umatlas      6859 Oct 13 16:20 init_data.xml
[2025-10-13 16:20:58] -rw-r--r--. 1 boincer umatlas        27 Oct 13 16:20 wrapper_checkpoint.txt
[2025-10-13 16:20:58] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 16:20 boinc_mmap_file
[2025-10-13 16:20:58] -rw-------. 1 boincer umatlas       823 Oct 13 16:20 pilotlog.txt
[2025-10-13 16:20:58] -rw-------. 1 boincer umatlas    796697 Oct 13 16:20 log.46676269._082661.job.log.1
[2025-10-13 16:20:58] -rw-------. 1 boincer umatlas       357 Oct 13 16:20 output.list
[2025-10-13 16:20:58] -rw-r--r--. 1 boincer umatlas       620 Oct 13 16:20 runtime_log
[2025-10-13 16:20:58] -rw-------. 1 boincer umatlas   1198080 Oct 13 16:20 result.tar.gz
[2025-10-13 16:20:58] -rw-r--r--. 1 boincer umatlas      8715 Oct 13 16:20 runtime_log.err
[2025-10-13 16:20:58] -rw-------. 1 boincer umatlas       654 Oct 13 16:20 nCWNDmYVDS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1UkNDmaHeCZm.diag
[2025-10-13 16:20:58] -rw-r--r--. 1 boincer umatlas     22449 Oct 13 16:20 stderr.txt
[2025-10-13 16:20:58] HITS file was successfully produced:
[2025-10-13 16:20:58] -rw-------. 1 boincer umatlas 197637265 Oct 13 16:19 shared/HITS.pool.root.1
[2025-10-13 16:20:58]  *** Contents of shared directory: ***
[2025-10-13 16:20:58] total 410736
[2025-10-13 16:20:58] -rw-r--r--. 2 boincer umatlas 221153153 Oct 13 14:46 ATLAS.root_0
[2025-10-13 16:20:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 14:46 start_atlas.sh
[2025-10-13 16:20:58] -rw-r--r--. 2 boincer umatlas    569677 Oct 13 14:46 input.tar.gz
[2025-10-13 16:20:58] -rw-------. 1 boincer umatlas 197637265 Oct 13 16:19 HITS.pool.root.1
[2025-10-13 16:20:58] -rw-------. 1 boincer umatlas   1198080 Oct 13 16:20 result.tar.gz
16:20:59 (3003532): run_atlas exited; CPU time 46521.187299
16:20:59 (3003532): called boinc_finish(0)

</stderr_txt>
]]>

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