Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:45:59 (4095519): wrapper (7.7.26015): starting
14:45:59 (4095519): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 14:45:59] Arguments: --nthreads 8
[2025-10-13 14:45:59] Threads: 8
[2025-10-13 14:45:59] Checking for CVMFS
[2025-10-13 14:45:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 14:46:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 14:46:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 14:46:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 14:46:00] 2.13.2.0 189278 124681 201804 151670 1 328 20941092 40960001 11162 16776704 0 105599563 99.783 69371526 41417 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 14:46:00] CVMFS is ok
[2025-10-13 14:46:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 14:46:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 14:46:00] Further information can be found at the LHC@home message board.
[2025-10-13 14:46:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 14:46:00] Checking for apptainer binary...
[2025-10-13 14:46:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 14:46:00] Running /usr/bin/apptainer --version
[2025-10-13 14:46:00] apptainer version 1.4.3-1.el9
[2025-10-13 14:46:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 14:46:00] c-210-31-1.aglt2.org
[2025-10-13 14:46:00] apptainer works
[2025-10-13 14:46:00] Set ATHENA_PROC_NUMBER=8
[2025-10-13 14:46:00] Set ATHENA_CORE_NUMBER=8
[2025-10-13 14:46:00] Starting ATLAS job with PandaID=6839867442
[2025-10-13 14:46:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:48:46 (214631): wrapper (7.7.26015): starting
17:48:46 (214631): wrapper: running run_atlas (--nthreads 11)
[2025-10-13 17:48:46] Arguments: --nthreads 11
[2025-10-13 17:48:46] Threads: 11
[2025-10-13 17:48:46] This job has been restarted, cleaning up previous attempt
[2025-10-13 17:48:46] Checking for CVMFS
[2025-10-13 17:48:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 17:48:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 17:48:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 17:48:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 17:48:47] 2.13.2.0 189278 124864 200128 151674 3 64 25534037 40960000 9677 16776704 0 105907955 99.783 69403717 41416 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 17:48:47] CVMFS is ok
[2025-10-13 17:48:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 17:48:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 17:48:47] Further information can be found at the LHC@home message board.
[2025-10-13 17:48:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 17:48:47] Checking for apptainer binary...
[2025-10-13 17:48:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 17:48:47] Running /usr/bin/apptainer --version
[2025-10-13 17:48:47] apptainer version 1.4.3-1.el9
[2025-10-13 17:48:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 17:48:47] c-210-31-1.aglt2.org
[2025-10-13 17:48:47] apptainer works
[2025-10-13 17:48:47] Set ATHENA_PROC_NUMBER=11
[2025-10-13 17:48:47] Set ATHENA_CORE_NUMBER=11
[2025-10-13 17:48:47] Starting ATLAS job with PandaID=6839867442
[2025-10-13 17:48:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:54:34]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:54:35] 2025-10-14 01:53:37,394 | INFO     | intersect: -18690399891.246376
[2025-10-13 21:54:35] 2025-10-14 01:53:37,394 | INFO     | chi2: 1.465362751156072
[2025-10-13 21:54:35] 2025-10-14 01:53:37,394 | INFO     | current chi2=1.465362751156072 (change=-0.03809392716717222 %)
[2025-10-13 21:54:35] 2025-10-14 01:53:37,395 | INFO     | right removable region: 234
[2025-10-13 21:54:35] 2025-10-14 01:53:37,395 | INFO     | sum of square deviations: 4024154585.642559
[2025-10-13 21:54:35] 2025-10-14 01:53:37,397 | INFO     | sum of deviations: 4037137343.2085104
[2025-10-13 21:54:35] 2025-10-14 01:53:37,398 | INFO     | mean x: 1760399613.7361703
[2025-10-13 21:54:35] 2025-10-14 01:53:37,398 | INFO     | mean y: 2656228.9872340425
[2025-10-13 21:54:35] 2025-10-14 01:53:37,398 | INFO     | -- intersect: -1763422799.124784
[2025-10-13 21:54:35] 2025-10-14 01:53:37,398 | INFO     | intersect: -1763422799.124784
[2025-10-13 21:54:35] 2025-10-14 01:53:37,399 | INFO     | chi2: 0.04504273204363291
[2025-10-13 21:54:35] 2025-10-14 01:53:37,399 | INFO     | current chi2=0.04504273204363291 (change=96.92500095600066 %)
[2025-10-13 21:54:35] 2025-10-14 01:53:37,399 | INFO     | sum of square deviations: 3772721643.321727
[2025-10-13 21:54:35] 2025-10-14 01:53:37,401 | INFO     | sum of deviations: 4013990244.8086967
[2025-10-13 21:54:35] 2025-10-14 01:53:37,402 | INFO     | mean x: 1760399766.2347827
[2025-10-13 21:54:35] 2025-10-14 01:53:37,402 | INFO     | mean y: 2656209.8739130436
[2025-10-13 21:54:35] 2025-10-14 01:53:37,402 | INFO     | -- intersect: -1870322545.698524
[2025-10-13 21:54:35] 2025-10-14 01:53:37,402 | INFO     | intersect: -1870322545.698524
[2025-10-13 21:54:35] 2025-10-14 01:53:37,402 | INFO     | chi2: 0.028411083175642445
[2025-10-13 21:54:35] 2025-10-14 01:53:37,403 | INFO     | current chi2=0.028411083175642445 (change=36.924156491838424 %)
[2025-10-13 21:54:35] 2025-10-14 01:53:37,403 | INFO     | sum of square deviations: 3531958881.04889
[2025-10-13 21:54:35] 2025-10-14 01:53:37,405 | INFO     | sum of deviations: 8437415427.240002
[2025-10-13 21:54:35] 2025-10-14 01:53:37,405 | INFO     | mean x: 1760399918.7422223
[2025-10-13 21:54:35] 2025-10-14 01:53:37,406 | INFO     | mean y: 2653405.28
[2025-10-13 21:54:35] 2025-10-14 01:53:37,406 | INFO     | -- intersect: -4202725516.9391313
[2025-10-13 21:54:35] 2025-10-14 01:53:37,406 | INFO     | intersect: -4202725516.9391313
[2025-10-13 21:54:35] 2025-10-14 01:53:37,406 | INFO     | chi2: 0.01462053889706467
[2025-10-13 21:54:35] 2025-10-14 01:53:37,407 | INFO     | current chi2=0.01462053889706467 (change=48.53931190628017 %)
[2025-10-13 21:54:35] 2025-10-14 01:53:37,407 | INFO     | sum of square deviations: 3301675642.745447
[2025-10-13 21:54:35] 2025-10-14 01:53:37,409 | INFO     | sum of deviations: 10915829112.036371
[2025-10-13 21:54:35] 2025-10-14 01:53:37,409 | INFO     | mean x: 1760400071.2454545
[2025-10-13 21:54:35] 2025-10-14 01:53:37,410 | INFO     | mean y: 2651787.036363636
[2025-10-13 21:54:35] 2025-10-14 01:53:37,410 | INFO     | -- intersect: -5817491808.460237
[2025-10-13 21:54:35] 2025-10-14 01:53:37,410 | INFO     | intersect: -5817491808.460237
[2025-10-13 21:54:35] 2025-10-14 01:53:37,410 | INFO     | chi2: 0.0023707413496881807
[2025-10-13 21:54:35] 2025-10-14 01:53:37,411 | INFO     | current chi2=0.0023707413496881807 (change=83.78485658853417 %)
[2025-10-13 21:54:35] 2025-10-14 01:53:37,411 | INFO     | sum of square deviations: 3081610635.934903
[2025-10-13 21:54:35] 2025-10-14 01:53:37,412 | INFO     | sum of deviations: 9314365268.762793
[2025-10-13 21:54:35] 2025-10-14 01:53:37,413 | INFO     | mean x: 1760400223.7534883
[2025-10-13 21:54:35] 2025-10-14 01:53:37,413 | INFO     | mean y: 2652895.31627907
[2025-10-13 21:54:35] 2025-10-14 01:53:37,413 | INFO     | -- intersect: -5318269388.649421
[2025-10-13 21:54:35] 2025-10-14 01:53:37,413 | INFO     | intersect: -5318269388.649421
[2025-10-13 21:54:35] 2025-10-14 01:53:37,414 | INFO     | chi2: 0.0018115373010222184
[2025-10-13 21:54:35] 2025-10-14 01:53:37,414 | INFO     | current chi2=0.0018115373010222184 (change=23.587729160733346 %)
[2025-10-13 21:54:35] 2025-10-14 01:53:37,414 | INFO     | left removable region: 50
[2025-10-13 21:54:35] 2025-10-14 01:53:37,414 | INFO     | sum of square deviations: 1931749193.8641236
[2025-10-13 21:54:35] 2025-10-14 01:53:37,416 | INFO     | sum of deviations: 4697562578.46196
[2025-10-13 21:54:35] 2025-10-14 01:53:37,416 | INFO     | mean x: 1760400803.222826
[2025-10-13 21:54:35] 2025-10-14 01:53:37,416 | INFO     | mean y: 2655510.842391304
[2025-10-13 21:54:35] 2025-10-14 01:53:37,416 | INFO     | -- intersect: -4278227826.6948495
[2025-10-13 21:54:35] 2025-10-14 01:53:37,416 | INFO     | intersect: -4278227826.6948495
[2025-10-13 21:54:35] 2025-10-14 01:53:37,417 | INFO     | chi2: 0.0012629199817517577
[2025-10-13 21:54:35] 2025-10-14 01:53:37,417 | INFO     | -- intersect: -4278227826.6948495
[2025-10-13 21:54:35] 2025-10-14 01:53:37,417 | INFO     | current memory leak: 2.43 B/s (using 184 data points, chi2=0.00)
[2025-10-13 21:54:35] 2025-10-14 01:53:37,418 | INFO     | could have reported an average CPU frequency of 2503 MHz (11 samples)
[2025-10-13 21:54:35] 2025-10-14 01:53:37,418 | INFO     | ..............................
[2025-10-13 21:54:35] 2025-10-14 01:53:37,419 | INFO     | . Timing measurements:
[2025-10-13 21:54:35] 2025-10-14 01:53:37,419 | INFO     | . get job = 0 s
[2025-10-13 21:54:35] 2025-10-14 01:53:37,419 | INFO     | . initial setup = 2 s
[2025-10-13 21:54:35] 2025-10-14 01:53:37,419 | INFO     | . payload setup = 6 s
[2025-10-13 21:54:35] 2025-10-14 01:53:37,419 | INFO     | . stage-in = 0 s
[2025-10-13 21:54:35] 2025-10-14 01:53:37,419 | INFO     | . payload execution = 14633 s
[2025-10-13 21:54:35] 2025-10-14 01:53:37,419 | INFO     | . stage-out = 4 s
[2025-10-13 21:54:35] 2025-10-14 01:53:37,419 | INFO     | . log creation = 0 s
[2025-10-13 21:54:35] 2025-10-14 01:53:37,419 | INFO     | ..............................
[2025-10-13 21:54:35] 2025-10-14 01:53:37,547 | INFO     | 
[2025-10-13 21:54:35] 2025-10-14 01:53:37,548 | INFO     | job summary report
[2025-10-13 21:54:35] 2025-10-14 01:53:37,548 | INFO     | --------------------------------------------------
[2025-10-13 21:54:35] 2025-10-14 01:53:37,548 | INFO     | PanDA job id: 6839867442
[2025-10-13 21:54:35] 2025-10-14 01:53:37,548 | INFO     | task id: 46676269
[2025-10-13 21:54:35] 2025-10-14 01:53:37,548 | INFO     | errors: (none)
[2025-10-13 21:54:35] 2025-10-14 01:53:37,548 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 21:54:35] 2025-10-14 01:53:37,548 | INFO     | pilot state: finished 
[2025-10-13 21:54:35] 2025-10-14 01:53:37,549 | INFO     | transexitcode: 0
[2025-10-13 21:54:35] 2025-10-14 01:53:37,549 | INFO     | exeerrorcode: 0
[2025-10-13 21:54:35] 2025-10-14 01:53:37,549 | INFO     | exeerrordiag: 
[2025-10-13 21:54:35] 2025-10-14 01:53:37,549 | INFO     | exitcode: 0
[2025-10-13 21:54:35] 2025-10-14 01:53:37,549 | INFO     | exitmsg: OK
[2025-10-13 21:54:35] 2025-10-14 01:53:37,549 | INFO     | cpuconsumptiontime: 45163 s
[2025-10-13 21:54:35] 2025-10-14 01:53:37,549 | INFO     | nevents: 400
[2025-10-13 21:54:35] 2025-10-14 01:53:37,549 | INFO     | neventsw: 0
[2025-10-13 21:54:35] 2025-10-14 01:53:37,549 | INFO     | pid: 236122
[2025-10-13 21:54:35] 2025-10-14 01:53:37,549 | INFO     | pgrp: 236122
[2025-10-13 21:54:35] 2025-10-14 01:53:37,549 | INFO     | corecount: 11
[2025-10-13 21:54:35] 2025-10-14 01:53:37,550 | INFO     | event service: False
[2025-10-13 21:54:35] 2025-10-14 01:53:37,550 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 14644: 2380025, 14645: 2380024, 14650: 2389078, 14653: 2389262, 14660: 2389456}
[2025-10-13 21:54:35] 2025-10-14 01:53:37,550 | INFO     | --------------------------------------------------
[2025-10-13 21:54:35] 2025-10-14 01:53:37,550 | INFO     | 
[2025-10-13 21:54:35] 2025-10-14 01:53:37,550 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 21:54:35] 2025-10-14 01:53:37,573 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 21:54:35] 2025-10-14 01:53:37,573 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 21:54:35] 2025-10-14 01:53:37,573 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 21:54:35] 2025-10-14 01:53:37,573 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 21:54:35] 2025-10-14 01:53:37,574 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 21:54:35] 2025-10-14 01:53:37,574 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 21:54:35] 2025-10-14 01:53:37,574 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 21:54:35] 2025-10-14 01:53:37,574 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 21:54:35] 2025-10-14 01:53:37,574 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 21:54:35] 2025-10-14 01:53:37,574 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 21:54:35] 2025-10-14 01:53:37,574 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 21:54:35] 2025-10-14 01:53:37,574 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 21:54:35] 2025-10-14 01:53:37,574 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 21:54:35] 2025-10-14 01:53:37,574 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 21:54:35] 2025-10-14 01:53:37,574 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 21:54:35] 2025-10-14 01:53:37,574 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 21:54:35] 2025-10-14 01:53:37,574 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 21:54:35] 2025-10-14 01:53:37,575 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 21:54:35] 2025-10-14 01:53:37,575 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 21:54:35] 2025-10-14 01:53:37,575 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 21:54:35] 2025-10-14 01:53:37,575 | INFO     | job 6839867442 has completed (purged errors)
[2025-10-13 21:54:35] 2025-10-14 01:53:37,575 | INFO     | overall cleanup function is called
[2025-10-13 21:54:35] 2025-10-14 01:53:38,584 | INFO     | --- collectZombieJob: --- 10, [236122]
[2025-10-13 21:54:35] 2025-10-14 01:53:38,584 | INFO     | zombie collector waiting for pid 236122
[2025-10-13 21:54:35] 2025-10-14 01:53:38,584 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 21:54:35] 2025-10-14 01:53:38,585 | INFO     | collected zombie processes
[2025-10-13 21:54:35] 2025-10-14 01:53:38,585 | INFO     | will attempt to kill all subprocesses of pid=236122
[2025-10-13 21:54:35] 2025-10-14 01:53:38,812 | INFO     | process IDs to be killed: [236122] (in reverse order)
[2025-10-13 21:54:35] 2025-10-14 01:53:38,895 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 21:54:35] 2025-10-14 01:53:38,896 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 21:54:35] 2025-10-14 01:53:38,907 | INFO     | did not find any defunct processes belonging to 236122
[2025-10-13 21:54:35] 2025-10-14 01:53:38,919 | INFO     | did not find any defunct processes belonging to 236122
[2025-10-13 21:54:35] 2025-10-14 01:53:38,919 | INFO     | ready for new job
[2025-10-13 21:54:35] 2025-10-14 01:53:38,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 21:54:35] 2025-10-14 01:53:38,922 | INFO     | ***************************************
[2025-10-13 21:54:35] 2025-10-14 01:53:38,924 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 21:54:35] 2025-10-14 01:53:38,924 | INFO     | ***************************************
[2025-10-13 21:54:35] 2025-10-14 01:53:38,924 | INFO     | 
[2025-10-13 21:54:35] 2025-10-14 01:53:38,928 | INFO     | architecture information:
[2025-10-13 21:54:35] 2025-10-14 01:53:38,929 | INFO     | executing command: cat /etc/os-release
[2025-10-13 21:54:35] 2025-10-14 01:53:38,948 | INFO     | cat /etc/os-release:
[2025-10-13 21:54:35] NAME="CentOS Linux"
[2025-10-13 21:54:35] VERSION="7 (Core)"
[2025-10-13 21:54:35] ID="centos"
[2025-10-13 21:54:35] ID_LIKE="rhel fedora"
[2025-10-13 21:54:35] VERSION_ID="7"
[2025-10-13 21:54:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 21:54:35] ANSI_COLOR="0;31"
[2025-10-13 21:54:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 21:54:35] HOME_URL="https://www.centos.org/"
[2025-10-13 21:54:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 21:54:35] 
[2025-10-13 21:54:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 21:54:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 21:54:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 21:54:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 21:54:35] 
[2025-10-13 21:54:35] 2025-10-14 01:53:38,948 | INFO     | ***************************************
[2025-10-13 21:54:35] 2025-10-14 01:53:39,451 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 21:54:35] 2025-10-14 01:53:39,471 | INFO     | sufficient remaining disk space (75107401728 B)
[2025-10-13 21:54:35] 2025-10-14 01:53:39,471 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 21:54:35] 2025-10-14 01:53:39,471 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 21:54:35] 2025-10-14 01:53:39,471 | INFO     | update_server=False
[2025-10-13 21:54:35] 2025-10-14 01:53:39,471 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 21:54:35] 2025-10-14 01:53:39,472 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:54:35] 2025-10-14 01:53:39,472 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:54:35] 2025-10-14 01:53:39,472 | INFO     | aborting loop
[2025-10-13 21:54:35] 2025-10-14 01:53:39,549 | INFO     | all job control threads have been joined
[2025-10-13 21:54:35] 2025-10-14 01:53:39,743 | INFO     | all payload control threads have been joined
[2025-10-13 21:54:35] 2025-10-14 01:53:40,140 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:54:35] 2025-10-14 01:53:40,351 | INFO     | all data control threads have been joined
[2025-10-13 21:54:35] 2025-10-14 01:53:40,473 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:54:35] 2025-10-14 01:53:40,474 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:54:35] 2025-10-14 01:53:40,478 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:54:35] 2025-10-14 01:53:40,553 | INFO     | [job] control thread has finished
[2025-10-13 21:54:35] 2025-10-14 01:53:40,749 | INFO     | [payload] control thread has finished
[2025-10-13 21:54:35] 2025-10-14 01:53:40,759 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:54:35] 2025-10-14 01:53:40,867 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:54:35] 2025-10-14 01:53:41,357 | INFO     | [data] control thread has finished
[2025-10-13 21:54:35] 2025-10-14 01:53:41,397 | INFO     | [job] validate thread has finished
[2025-10-13 21:54:35] 2025-10-14 01:53:41,410 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:54:35] 2025-10-14 01:53:41,515 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:54:35] 2025-10-14 01:53:41,627 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:54:35] 2025-10-14 01:53:41,867 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:54:35] 2025-10-14 01:53:41,922 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:54:35] 2025-10-14 01:53:42,023 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:54:35] 2025-10-14 01:53:42,146 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:54:35] 2025-10-14 01:53:44,873 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:54:35] 2025-10-14 01:54:09,386 | INFO     | PID=222177 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 21:54:35] 2025-10-14 01:54:09,387 | INFO     | .. there are 8 such processes running
[2025-10-13 21:54:35] 2025-10-14 01:54:09,388 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:54:35] 2025-10-14 01:54:09,388 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:54:35] 2025-10-14 01:54:09,388 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:54:35] 2025-10-14 01:54:26,348 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:54:35] 2025-10-14 01:54:27,265 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140530186831680)>', '<ExcThread(monitor, started 140529241155328)>']
[2025-10-13 21:54:35] 2025-10-14 01:54:27,472 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:54:35] 2025-10-14 01:54:27,473 | INFO     | [monitor] control thread has ended
[2025-10-13 21:54:35] 2025-10-14 01:54:32,289 | INFO     | all workflow threads have been joined
[2025-10-13 21:54:35] 2025-10-14 01:54:32,290 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:54:35] 2025-10-14 01:54:32,290 | INFO     | traces error code: 0
[2025-10-13 21:54:35] 2025-10-14 01:54:32,290 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:54:35] 2025-10-14 01:54:32,517 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:54:35] 2025-10-14 01:54:32,522 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:54:35] 2025-10-14 01:54:32,527 [wrapper] pilotpid: 222177
[2025-10-13 21:54:35] 2025-10-14 01:54:32,531 [wrapper] Pilot exit status: 0
[2025-10-13 21:54:35] 2025-10-14 01:54:32,768 [wrapper] pandaids: 6839867442 6839867442
[2025-10-13 21:54:35] 2025-10-14 01:54:32,817 [wrapper] cleanup supervisor_pilot  582436 222178
[2025-10-13 21:54:35] 2025-10-14 01:54:32,820 [wrapper] Test setup, not cleaning
[2025-10-13 21:54:35] 2025-10-14 01:54:32,822 [wrapper] apfmon messages muted
[2025-10-13 21:54:35] 2025-10-14 01:54:32,825 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:54:35] 2025-10-14 01:54:32,828 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:54:35]  *** Error codes and diagnostics ***
[2025-10-13 21:54:35]     "exeErrorCode": 0,
[2025-10-13 21:54:35]     "exeErrorDiag": "",
[2025-10-13 21:54:35]     "pilotErrorCode": 0,
[2025-10-13 21:54:35]     "pilotErrorDiag": "",
[2025-10-13 21:54:35]  *** Listing of results directory ***
[2025-10-13 21:54:35] total 624220
[2025-10-13 21:54:35] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-13 21:54:35] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 06:38 pilot3.tar.gz
[2025-10-13 21:54:35] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 06:53 queuedata.json
[2025-10-13 21:54:35] -rwx------. 1 boincer umatlas     36292 Oct 12 06:55 runpilot2-wrapper.sh
[2025-10-13 21:54:35] -rw-r--r--. 1 boincer umatlas       100 Oct 13 14:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:54:35] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 14:45 run_atlas
[2025-10-13 21:54:35] -rw-r--r--. 1 boincer umatlas       105 Oct 13 14:45 job.xml
[2025-10-13 21:54:35] -rw-r--r--. 3 boincer umatlas 218597079 Oct 13 14:45 EVNT.46676267._003632.pool.root.1
[2025-10-13 21:54:35] -rw-r--r--. 3 boincer umatlas 218597079 Oct 13 14:45 ATLAS.root_0
[2025-10-13 21:54:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 14:45 start_atlas.sh
[2025-10-13 21:54:35] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 14:45 shared
[2025-10-13 21:54:35] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 14:45 input.tar.gz
[2025-10-13 21:54:35] -rw-r--r--. 1 boincer umatlas         0 Oct 13 14:45 boinc_lockfile
[2025-10-13 21:54:35] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 17:48 pandaJob.out
[2025-10-13 21:54:35] -rw-------. 1 boincer umatlas    972791 Oct 13 17:48 agis_schedconf.cvmfs.json
[2025-10-13 21:54:35] -rw-r--r--. 1 boincer umatlas      6842 Oct 13 21:48 init_data.xml
[2025-10-13 21:54:35] -rw-------. 1 boincer umatlas 193323852 Oct 13 21:52 HITS.46676269._076321.pool.root.1
[2025-10-13 21:54:35] -rw-r--r--. 1 boincer umatlas       532 Oct 13 21:52 boinc_task_state.xml
[2025-10-13 21:54:35] -rw-------. 1 boincer umatlas      1054 Oct 13 21:53 memory_monitor_summary.json
[2025-10-13 21:54:35] -rw-------. 1 boincer umatlas   1560580 Oct 13 21:53 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:54:35] -rw-------. 1 boincer umatlas    500394 Oct 13 21:53 log.46676269._076321.job.log.tgz.1
[2025-10-13 21:54:35] -rw-------. 1 boincer umatlas      7850 Oct 13 21:53 heartbeat.json
[2025-10-13 21:54:35] -rw-------. 1 boincer umatlas        96 Oct 13 21:54 pilot_heartbeat.json
[2025-10-13 21:54:35] -rw-r--r--. 1 boincer umatlas        28 Oct 13 21:54 wrapper_checkpoint.txt
[2025-10-13 21:54:35] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 21:54 boinc_mmap_file
[2025-10-13 21:54:35] -rw-------. 1 boincer umatlas      4822 Oct 13 21:54 pilotlog.txt
[2025-10-13 21:54:35] -rw-------. 1 boincer umatlas   1883937 Oct 13 21:54 log.46676269._076321.job.log.1
[2025-10-13 21:54:35] -rw-------. 1 boincer umatlas       357 Oct 13 21:54 output.list
[2025-10-13 21:54:35] -rw-r--r--. 1 boincer umatlas       620 Oct 13 21:54 runtime_log
[2025-10-13 21:54:35] -rw-------. 1 boincer umatlas   2406400 Oct 13 21:54 result.tar.gz
[2025-10-13 21:54:35] -rw-r--r--. 1 boincer umatlas      8801 Oct 13 21:54 runtime_log.err
[2025-10-13 21:54:35] -rw-------. 1 boincer umatlas      1281 Oct 13 21:54 noiNDmru8R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRWjNDmijy9cn.diag
[2025-10-13 21:54:35] -rw-r--r--. 1 boincer umatlas     23199 Oct 13 21:54 stderr.txt
[2025-10-13 21:54:35] HITS file was successfully produced:
[2025-10-13 21:54:35] -rw-------. 1 boincer umatlas 193323852 Oct 13 21:52 shared/HITS.pool.root.1
[2025-10-13 21:54:35]  *** Contents of shared directory: ***
[2025-10-13 21:54:35] total 405208
[2025-10-13 21:54:35] -rw-r--r--. 3 boincer umatlas 218597079 Oct 13 14:45 ATLAS.root_0
[2025-10-13 21:54:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 14:45 start_atlas.sh
[2025-10-13 21:54:35] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 14:45 input.tar.gz
[2025-10-13 21:54:35] -rw-------. 1 boincer umatlas 193323852 Oct 13 21:52 HITS.pool.root.1
[2025-10-13 21:54:35] -rw-------. 1 boincer umatlas   2406400 Oct 13 21:54 result.tar.gz
21:54:36 (214631): run_atlas exited; CPU time 45486.626696
21:54:36 (214631): called boinc_finish(0)

</stderr_txt>
]]>

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