Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:37:12 (415050): wrapper (7.7.26015): starting
14:37:12 (415050): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 14:37:12] Arguments: --nthreads 9
[2025-10-13 14:37:12] Threads: 9
[2025-10-13 14:37:12] Checking for CVMFS
[2025-10-13 14:37:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 14:37:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 14:37:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 14:37:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 14:37:13] 2.13.1.0 5004 7488 94536 151670 1 135 32056816 40960000 21122 16776704 0 26645357 99.830 11637884 32115 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 14:37:13] CVMFS is ok
[2025-10-13 14:37:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 14:37:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 14:37:13] Further information can be found at the LHC@home message board.
[2025-10-13 14:37:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 14:37:13] Checking for apptainer binary...
[2025-10-13 14:37:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 14:37:13] Running /usr/bin/apptainer --version
[2025-10-13 14:37:13] apptainer version 1.4.3-1.el9
[2025-10-13 14:37:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 14:37:13] c-212-12.aglt2.org
[2025-10-13 14:37:13] apptainer works
[2025-10-13 14:37:13] Set ATHENA_PROC_NUMBER=9
[2025-10-13 14:37:13] Set ATHENA_CORE_NUMBER=9
[2025-10-13 14:37:13] Starting ATLAS job with PandaID=6843298513
[2025-10-13 14:37:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 17:18:51]  *** The last 200 lines of the pilot log: ***
[2025-10-13 17:18:51] 2025-10-13 21:17:57,595 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 17:18:51] 2025-10-13 21:17:57,597 | INFO     | fitting pss+swap vs Time
[2025-10-13 17:18:51] 2025-10-13 21:17:57,598 | INFO     | sum of square deviations: 1223017952.9873388
[2025-10-13 17:18:51] 2025-10-13 21:17:57,598 | INFO     | sum of deviations: -30393917273.1139
[2025-10-13 17:18:51] 2025-10-13 21:17:57,598 | INFO     | mean x: 1760385471.556962
[2025-10-13 17:18:51] 2025-10-13 21:17:57,598 | INFO     | mean y: 2614114.5126582277
[2025-10-13 17:18:51] 2025-10-13 21:17:57,599 | INFO     | -- intersect: 43750958331.86677
[2025-10-13 17:18:51] 2025-10-13 21:17:57,599 | INFO     | intersect: 43750958331.86677
[2025-10-13 17:18:51] 2025-10-13 21:17:57,599 | INFO     | chi2: 2.2328938621438557
[2025-10-13 17:18:51] 2025-10-13 21:17:57,599 | INFO     | sum of square deviations: 1110544170.4705844
[2025-10-13 17:18:51] 2025-10-13 21:17:57,600 | INFO     | sum of deviations: -19561805360.117653
[2025-10-13 17:18:51] 2025-10-13 21:17:57,600 | INFO     | mean x: 1760385319.0588236
[2025-10-13 17:18:51] 2025-10-13 21:17:57,600 | INFO     | mean y: 2628445.2352941176
[2025-10-13 17:18:51] 2025-10-13 21:17:57,600 | INFO     | -- intersect: 31011133902.19988
[2025-10-13 17:18:51] 2025-10-13 21:17:57,600 | INFO     | intersect: 31011133902.19988
[2025-10-13 17:18:51] 2025-10-13 21:17:57,600 | INFO     | chi2: 1.5542557226813478
[2025-10-13 17:18:51] 2025-10-13 21:17:57,600 | INFO     | current chi2=1.5542557226813478 (change=30.392762995502654 %)
[2025-10-13 17:18:51] 2025-10-13 21:17:57,601 | INFO     | sum of square deviations: 1005186800.4527025
[2025-10-13 17:18:51] 2025-10-13 21:17:57,601 | INFO     | sum of deviations: -18908736867.398643
[2025-10-13 17:18:51] 2025-10-13 21:17:57,601 | INFO     | mean x: 1760385166.5608108
[2025-10-13 17:18:51] 2025-10-13 21:17:57,601 | INFO     | mean y: 2629391.6554054054
[2025-10-13 17:18:51] 2025-10-13 21:17:57,601 | INFO     | -- intersect: 33117528915.583603
[2025-10-13 17:18:51] 2025-10-13 21:17:57,601 | INFO     | intersect: 33117528915.583603
[2025-10-13 17:18:51] 2025-10-13 21:17:57,602 | INFO     | chi2: 1.5482303744515091
[2025-10-13 17:18:51] 2025-10-13 21:17:57,602 | INFO     | current chi2=1.5482303744515091 (change=0.38766775260405467 %)
[2025-10-13 17:18:51] 2025-10-13 21:17:57,602 | INFO     | right removable region: 147
[2025-10-13 17:18:51] 2025-10-13 21:17:57,602 | INFO     | sum of square deviations: 1110538680.4705844
[2025-10-13 17:18:51] 2025-10-13 21:17:57,603 | INFO     | sum of deviations: -50914803356.82352
[2025-10-13 17:18:51] 2025-10-13 21:17:57,603 | INFO     | mean x: 1760385624.0588236
[2025-10-13 17:18:51] 2025-10-13 21:17:57,603 | INFO     | mean y: 2641422.7581699346
[2025-10-13 17:18:51] 2025-10-13 21:17:57,603 | INFO     | -- intersect: 80710940428.74504
[2025-10-13 17:18:51] 2025-10-13 21:17:57,603 | INFO     | intersect: 80710940428.74504
[2025-10-13 17:18:51] 2025-10-13 21:17:57,603 | INFO     | chi2: 0.9279047107577214
[2025-10-13 17:18:51] 2025-10-13 21:17:57,603 | INFO     | current chi2=0.9279047107577214 (change=58.4438505345338 %)
[2025-10-13 17:18:51] 2025-10-13 21:17:57,603 | INFO     | sum of square deviations: 1005175820.4527025
[2025-10-13 17:18:51] 2025-10-13 21:17:57,604 | INFO     | sum of deviations: -43951080182.97974
[2025-10-13 17:18:51] 2025-10-13 21:17:57,604 | INFO     | mean x: 1760385776.5608108
[2025-10-13 17:18:51] 2025-10-13 21:17:57,604 | INFO     | mean y: 2631338.831081081
[2025-10-13 17:18:51] 2025-10-13 21:17:57,604 | INFO     | -- intersect: 76975092120.6231
[2025-10-13 17:18:51] 2025-10-13 21:17:57,604 | INFO     | intersect: 76975092120.6231
[2025-10-13 17:18:51] 2025-10-13 21:17:57,605 | INFO     | chi2: 0.917907089159535
[2025-10-13 17:18:51] 2025-10-13 21:17:57,605 | INFO     | current chi2=0.917907089159535 (change=1.0774405477500382 %)
[2025-10-13 17:18:51] 2025-10-13 21:17:57,608 | INFO     | left removable region: 20
[2025-10-13 17:18:51] 2025-10-13 21:17:57,608 | INFO     | sum of square deviations: 635126640.3622038
[2025-10-13 17:18:51] 2025-10-13 21:17:57,609 | INFO     | sum of deviations: -20922325278.20472
[2025-10-13 17:18:51] 2025-10-13 21:17:57,609 | INFO     | mean x: 1760385746.070866
[2025-10-13 17:18:51] 2025-10-13 21:17:57,609 | INFO     | mean y: 2628128.1338582677
[2025-10-13 17:18:51] 2025-10-13 21:17:57,609 | INFO     | -- intersect: 57993209618.15818
[2025-10-13 17:18:51] 2025-10-13 21:17:57,609 | INFO     | intersect: 57993209618.15818
[2025-10-13 17:18:51] 2025-10-13 21:17:57,609 | INFO     | chi2: 0.17743425421330905
[2025-10-13 17:18:51] 2025-10-13 21:17:57,609 | INFO     | -- intersect: 57993209618.15818
[2025-10-13 17:18:51] 2025-10-13 21:17:57,609 | INFO     | current memory leak: -32.94 B/s (using 127 data points, chi2=0.18)
[2025-10-13 17:18:51] 2025-10-13 21:17:57,610 | INFO     | could have reported an average CPU frequency of 3006 MHz (9 samples)
[2025-10-13 17:18:51] 2025-10-13 21:17:57,610 | INFO     | ..............................
[2025-10-13 17:18:51] 2025-10-13 21:17:57,610 | INFO     | . Timing measurements:
[2025-10-13 17:18:51] 2025-10-13 21:17:57,610 | INFO     | . get job = 0 s
[2025-10-13 17:18:51] 2025-10-13 21:17:57,610 | INFO     | . initial setup = 3 s
[2025-10-13 17:18:51] 2025-10-13 21:17:57,610 | INFO     | . payload setup = 8 s
[2025-10-13 17:18:51] 2025-10-13 21:17:57,610 | INFO     | . stage-in = 0 s
[2025-10-13 17:18:51] 2025-10-13 21:17:57,610 | INFO     | . payload execution = 9586 s
[2025-10-13 17:18:51] 2025-10-13 21:17:57,610 | INFO     | . stage-out = 0 s
[2025-10-13 17:18:51] 2025-10-13 21:17:57,610 | INFO     | . log creation = 0 s
[2025-10-13 17:18:51] 2025-10-13 21:17:57,610 | INFO     | ..............................
[2025-10-13 17:18:51] 2025-10-13 21:17:57,687 | INFO     | 
[2025-10-13 17:18:51] 2025-10-13 21:17:57,689 | INFO     | job summary report
[2025-10-13 17:18:51] 2025-10-13 21:17:57,690 | INFO     | --------------------------------------------------
[2025-10-13 17:18:51] 2025-10-13 21:17:57,690 | INFO     | PanDA job id: 6843298513
[2025-10-13 17:18:51] 2025-10-13 21:17:57,690 | INFO     | task id: 46676269
[2025-10-13 17:18:51] 2025-10-13 21:17:57,690 | INFO     | errors: (none)
[2025-10-13 17:18:51] 2025-10-13 21:17:57,690 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 17:18:51] 2025-10-13 21:17:57,690 | INFO     | pilot state: finished 
[2025-10-13 17:18:51] 2025-10-13 21:17:57,690 | INFO     | transexitcode: 0
[2025-10-13 17:18:51] 2025-10-13 21:17:57,690 | INFO     | exeerrorcode: 0
[2025-10-13 17:18:51] 2025-10-13 21:17:57,690 | INFO     | exeerrordiag: 
[2025-10-13 17:18:51] 2025-10-13 21:17:57,690 | INFO     | exitcode: 0
[2025-10-13 17:18:51] 2025-10-13 21:17:57,691 | INFO     | exitmsg: OK
[2025-10-13 17:18:51] 2025-10-13 21:17:57,691 | INFO     | cpuconsumptiontime: 36396 s
[2025-10-13 17:18:51] 2025-10-13 21:17:57,691 | INFO     | nevents: 400
[2025-10-13 17:18:51] 2025-10-13 21:17:57,691 | INFO     | neventsw: 0
[2025-10-13 17:18:51] 2025-10-13 21:17:57,691 | INFO     | pid: 425165
[2025-10-13 17:18:51] 2025-10-13 21:17:57,691 | INFO     | pgrp: 425165
[2025-10-13 17:18:51] 2025-10-13 21:17:57,691 | INFO     | corecount: 9
[2025-10-13 17:18:51] 2025-10-13 21:17:57,691 | INFO     | event service: False
[2025-10-13 17:18:51] 2025-10-13 21:17:57,691 | INFO     | sizes: {0: 2348806, 7: 2349068, 11: 2349096, 9598: 2377527, 9599: 2386525, 9602: 2386581, 9610: 2386967}
[2025-10-13 17:18:51] 2025-10-13 21:17:57,691 | INFO     | --------------------------------------------------
[2025-10-13 17:18:51] 2025-10-13 21:17:57,691 | INFO     | 
[2025-10-13 17:18:51] 2025-10-13 21:17:57,691 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 17:18:51] 2025-10-13 21:17:57,796 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 17:18:51] 2025-10-13 21:17:57,797 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 17:18:51] 2025-10-13 21:17:57,797 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 17:18:51] 2025-10-13 21:17:57,797 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 17:18:51] 2025-10-13 21:17:57,797 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 17:18:51] 2025-10-13 21:17:57,797 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 17:18:51] 2025-10-13 21:17:57,797 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 17:18:51] 2025-10-13 21:17:57,797 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 17:18:51] 2025-10-13 21:17:57,797 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 17:18:51] 2025-10-13 21:17:57,797 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 17:18:51] 2025-10-13 21:17:57,797 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 17:18:51] 2025-10-13 21:17:57,797 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 17:18:51] 2025-10-13 21:17:57,798 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 17:18:51] 2025-10-13 21:17:57,798 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 17:18:51] 2025-10-13 21:17:57,798 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 17:18:51] 2025-10-13 21:17:57,798 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 17:18:51] 2025-10-13 21:17:57,798 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 17:18:51] 2025-10-13 21:17:57,798 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 17:18:51] 2025-10-13 21:17:57,798 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 17:18:51] 2025-10-13 21:17:57,798 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 17:18:51] 2025-10-13 21:17:57,798 | INFO     | job 6843298513 has completed (purged errors)
[2025-10-13 17:18:51] 2025-10-13 21:17:57,799 | INFO     | overall cleanup function is called
[2025-10-13 17:18:51] 2025-10-13 21:17:58,808 | INFO     | --- collectZombieJob: --- 10, [425165]
[2025-10-13 17:18:51] 2025-10-13 21:17:58,809 | INFO     | zombie collector waiting for pid 425165
[2025-10-13 17:18:51] 2025-10-13 21:17:58,809 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 17:18:51] 2025-10-13 21:17:58,809 | INFO     | collected zombie processes
[2025-10-13 17:18:51] 2025-10-13 21:17:58,809 | INFO     | will attempt to kill all subprocesses of pid=425165
[2025-10-13 17:18:51] 2025-10-13 21:17:59,229 | INFO     | process IDs to be killed: [425165] (in reverse order)
[2025-10-13 17:18:51] 2025-10-13 21:17:59,355 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 17:18:51] 2025-10-13 21:17:59,355 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 17:18:51] 2025-10-13 21:17:59,373 | INFO     | did not find any defunct processes belonging to 425165
[2025-10-13 17:18:51] 2025-10-13 21:17:59,390 | INFO     | did not find any defunct processes belonging to 425165
[2025-10-13 17:18:51] 2025-10-13 21:17:59,391 | INFO     | ready for new job
[2025-10-13 17:18:51] 2025-10-13 21:17:59,391 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 17:18:51] 2025-10-13 21:17:59,393 | INFO     | ***************************************
[2025-10-13 17:18:51] 2025-10-13 21:17:59,393 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 17:18:51] 2025-10-13 21:17:59,393 | INFO     | ***************************************
[2025-10-13 17:18:51] 2025-10-13 21:17:59,393 | INFO     | 
[2025-10-13 17:18:51] 2025-10-13 21:17:59,399 | INFO     | architecture information:
[2025-10-13 17:18:51] 2025-10-13 21:17:59,399 | INFO     | executing command: cat /etc/os-release
[2025-10-13 17:18:51] 2025-10-13 21:17:59,422 | INFO     | cat /etc/os-release:
[2025-10-13 17:18:51] NAME="CentOS Linux"
[2025-10-13 17:18:51] VERSION="7 (Core)"
[2025-10-13 17:18:51] ID="centos"
[2025-10-13 17:18:51] ID_LIKE="rhel fedora"
[2025-10-13 17:18:51] VERSION_ID="7"
[2025-10-13 17:18:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 17:18:51] ANSI_COLOR="0;31"
[2025-10-13 17:18:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 17:18:51] HOME_URL="https://www.centos.org/"
[2025-10-13 17:18:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 17:18:51] 
[2025-10-13 17:18:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 17:18:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 17:18:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 17:18:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 17:18:51] 
[2025-10-13 17:18:51] 2025-10-13 21:17:59,423 | INFO     | ***************************************
[2025-10-13 17:18:51] 2025-10-13 21:17:59,927 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 17:18:51] 2025-10-13 21:17:59,957 | INFO     | sufficient remaining disk space (129829437440 B)
[2025-10-13 17:18:51] 2025-10-13 21:17:59,958 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 17:18:51] 2025-10-13 21:17:59,958 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 17:18:51] 2025-10-13 21:17:59,958 | INFO     | update_server=False
[2025-10-13 17:18:51] 2025-10-13 21:17:59,958 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 17:18:51] 2025-10-13 21:18:00,094 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 17:18:51] 2025-10-13 21:18:00,094 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 17:18:51] 2025-10-13 21:18:00,095 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:18:51] 2025-10-13 21:18:00,095 | INFO     | will abort loop
[2025-10-13 17:18:51] 2025-10-13 21:18:00,293 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 17:18:51] 2025-10-13 21:18:00,360 | INFO     | all data control threads have been joined
[2025-10-13 17:18:51] 2025-10-13 21:18:00,877 | INFO     | all payload control threads have been joined
[2025-10-13 17:18:51] 2025-10-13 21:18:00,948 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 17:18:51] 2025-10-13 21:18:00,965 | INFO     | [job] retrieve thread has finished
[2025-10-13 17:18:51] 2025-10-13 21:18:01,100 | INFO     | [job] job monitor thread has finished
[2025-10-13 17:18:51] 2025-10-13 21:18:01,186 | INFO     | [payload] validate_post thread has finished
[2025-10-13 17:18:51] 2025-10-13 21:18:01,278 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 17:18:51] 2025-10-13 21:18:01,367 | INFO     | [data] control thread has finished
[2025-10-13 17:18:51] 2025-10-13 21:18:01,386 | INFO     | all job control threads have been joined
[2025-10-13 17:18:51] 2025-10-13 21:18:01,692 | INFO     | [data] copytool_in thread has finished
[2025-10-13 17:18:51] 2025-10-13 21:18:01,708 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 17:18:51] 2025-10-13 21:18:01,842 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 17:18:51] 2025-10-13 21:18:01,886 | INFO     | [payload] control thread has finished
[2025-10-13 17:18:51] 2025-10-13 21:18:01,950 | INFO     | [job] validate thread has finished
[2025-10-13 17:18:51] 2025-10-13 21:18:02,299 | INFO     | [data] copytool_out thread has finished
[2025-10-13 17:18:51] 2025-10-13 21:18:02,377 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 17:18:51] 2025-10-13 21:18:02,393 | INFO     | [job] control thread has finished
[2025-10-13 17:18:51] 2025-10-13 21:18:02,409 | INFO     | [payload] failed_post thread has finished
[2025-10-13 17:18:51] 2025-10-13 21:18:02,700 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:18:51] 2025-10-13 21:18:03,706 | INFO     | [job] queue monitor thread has finished
[2025-10-13 17:18:51] 2025-10-13 21:18:04,956 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 17:18:51] 2025-10-13 21:18:29,613 | INFO     | PID=418766 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 17:18:51] 2025-10-13 21:18:29,617 | INFO     | .. there are 20 such processes running
[2025-10-13 17:18:51] 2025-10-13 21:18:29,618 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 17:18:51] 2025-10-13 21:18:29,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 17:18:51] 2025-10-13 21:18:29,618 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 17:18:51] 2025-10-13 21:18:45,363 | INFO     | [monitor] cgroup control has ended
[2025-10-13 17:18:51] 2025-10-13 21:18:45,999 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140340747904832)>', '<ExcThread(monitor, started 140340111591168)>']
[2025-10-13 17:18:51] 2025-10-13 21:18:46,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 17:18:51] 2025-10-13 21:18:46,712 | INFO     | [monitor] control thread has ended
[2025-10-13 17:18:51] 2025-10-13 21:18:51,025 | INFO     | all workflow threads have been joined
[2025-10-13 17:18:51] 2025-10-13 21:18:51,026 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 17:18:51] 2025-10-13 21:18:51,026 | INFO     | traces error code: 0
[2025-10-13 17:18:51] 2025-10-13 21:18:51,027 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 17:18:51] 2025-10-13 21:18:51,264 [wrapper] ==== pilot stdout END ====
[2025-10-13 17:18:51] 2025-10-13 21:18:51,272 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 17:18:51] 2025-10-13 21:18:51,278 [wrapper] pilotpid: 418766
[2025-10-13 17:18:51] 2025-10-13 21:18:51,283 [wrapper] Pilot exit status: 0
[2025-10-13 17:18:51] 2025-10-13 21:18:51,315 [wrapper] pandaids: 6843298513
[2025-10-13 17:18:51] 2025-10-13 21:18:51,403 [wrapper] cleanup supervisor_pilot  791561 418767
[2025-10-13 17:18:51] 2025-10-13 21:18:51,407 [wrapper] Test setup, not cleaning
[2025-10-13 17:18:51] 2025-10-13 21:18:51,411 [wrapper] apfmon messages muted
[2025-10-13 17:18:51] 2025-10-13 21:18:51,414 [wrapper] ==== wrapper stdout END ====
[2025-10-13 17:18:51] 2025-10-13 21:18:51,417 [wrapper] ==== wrapper stderr END ====
[2025-10-13 17:18:51]  *** Error codes and diagnostics ***
[2025-10-13 17:18:51]     "exeErrorCode": 0,
[2025-10-13 17:18:51]     "exeErrorDiag": "",
[2025-10-13 17:18:51]     "pilotErrorCode": 0,
[2025-10-13 17:18:51]     "pilotErrorDiag": "",
[2025-10-13 17:18:51]  *** Listing of results directory ***
[2025-10-13 17:18:51] total 414300
[2025-10-13 17:18:51] -rw-r--r--. 1 boincer umatlas    557409 Oct 13 14:18 pilot3.tar.gz
[2025-10-13 17:18:51] -rw-r--r--. 1 boincer umatlas      5112 Oct 13 14:33 queuedata.json
[2025-10-13 17:18:51] -rwx------. 1 boincer umatlas     36292 Oct 13 14:36 runpilot2-wrapper.sh
[2025-10-13 17:18:51] -rw-r--r--. 1 boincer umatlas       100 Oct 13 14:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 17:18:51] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 14:37 run_atlas
[2025-10-13 17:18:51] -rw-r--r--. 1 boincer umatlas       105 Oct 13 14:37 job.xml
[2025-10-13 17:18:51] -rw-r--r--. 2 boincer umatlas 223079508 Oct 13 14:37 EVNT.46676267._004391.pool.root.1
[2025-10-13 17:18:51] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 14:37 start_atlas.sh
[2025-10-13 17:18:51] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 14:37 shared
[2025-10-13 17:18:51] -rw-r--r--. 2 boincer umatlas    569685 Oct 13 14:37 input.tar.gz
[2025-10-13 17:18:51] -rw-r--r--. 1 boincer umatlas         0 Oct 13 14:37 boinc_lockfile
[2025-10-13 17:18:51] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 14:37 pandaJob.out
[2025-10-13 17:18:51] -rw-------. 1 boincer umatlas    972799 Oct 13 14:37 agis_schedconf.cvmfs.json
[2025-10-13 17:18:51] -rw-------. 1 boincer umatlas   1560580 Oct 13 14:37 agis_ddmendpoints.agis.ALL.json
[2025-10-13 17:18:51] drwx------. 5 boincer umatlas      4096 Oct 13 14:37 pilot3
[2025-10-13 17:18:51] -rw-r--r--. 1 boincer umatlas      6946 Oct 13 17:11 init_data.xml
[2025-10-13 17:18:51] -rw-------. 1 boincer umatlas 193720035 Oct 13 17:17 HITS.46676269._096958.pool.root.1
[2025-10-13 17:18:51] -rw-r--r--. 1 boincer umatlas       529 Oct 13 17:17 boinc_task_state.xml
[2025-10-13 17:18:51] -rw-------. 1 boincer umatlas      1052 Oct 13 17:17 memory_monitor_summary.json
[2025-10-13 17:18:51] -rw-------. 1 boincer umatlas    430273 Oct 13 17:17 log.46676269._096958.job.log.tgz.1
[2025-10-13 17:18:51] -rw-------. 1 boincer umatlas      7805 Oct 13 17:17 heartbeat.json
[2025-10-13 17:18:51] -rw-------. 1 boincer umatlas        95 Oct 13 17:18 pilot_heartbeat.json
[2025-10-13 17:18:51] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 17:18 boinc_mmap_file
[2025-10-13 17:18:51] -rw-r--r--. 1 boincer umatlas        27 Oct 13 17:18 wrapper_checkpoint.txt
[2025-10-13 17:18:51] -rw-------. 1 boincer umatlas      5010 Oct 13 17:18 pilotlog.txt
[2025-10-13 17:18:51] -rw-------. 1 boincer umatlas   1343105 Oct 13 17:18 log.46676269._096958.job.log.1
[2025-10-13 17:18:51] -rw-------. 1 boincer umatlas       357 Oct 13 17:18 output.list
[2025-10-13 17:18:51] -rw-r--r--. 1 boincer umatlas       620 Oct 13 17:18 runtime_log
[2025-10-13 17:18:51] -rw-------. 1 boincer umatlas   1792000 Oct 13 17:18 result.tar.gz
[2025-10-13 17:18:51] -rw-r--r--. 1 boincer umatlas      8703 Oct 13 17:18 runtime_log.err
[2025-10-13 17:18:51] -rw-------. 1 boincer umatlas       658 Oct 13 17:18 3BsNDmhacS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbomNDmQvmuXm.diag
[2025-10-13 17:18:51] -rw-r--r--. 1 boincer umatlas     20978 Oct 13 17:18 stderr.txt
[2025-10-13 17:18:51] HITS file was successfully produced:
[2025-10-13 17:18:51] -rw-------. 1 boincer umatlas 193720035 Oct 13 17:17 shared/HITS.pool.root.1
[2025-10-13 17:18:51]  *** Contents of shared directory: ***
[2025-10-13 17:18:51] total 409364
[2025-10-13 17:18:51] -rw-r--r--. 2 boincer umatlas 223079508 Oct 13 14:37 ATLAS.root_0
[2025-10-13 17:18:51] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 14:37 start_atlas.sh
[2025-10-13 17:18:51] -rw-r--r--. 2 boincer umatlas    569685 Oct 13 14:37 input.tar.gz
[2025-10-13 17:18:51] -rw-------. 1 boincer umatlas 193720035 Oct 13 17:17 HITS.pool.root.1
[2025-10-13 17:18:51] -rw-------. 1 boincer umatlas   1792000 Oct 13 17:18 result.tar.gz
17:18:53 (415050): run_atlas exited; CPU time 36629.195619
17:18:53 (415050): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN