Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:28:59 (19889): wrapper (7.7.26015): starting
14:28:59 (19889): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 14:28:59] Arguments: --nthreads 8
[2025-10-13 14:28:59] Threads: 8
[2025-10-13 14:28:59] Checking for CVMFS
[2025-10-13 14:28:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 14:28:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 14:28:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 14:28:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 14:28:59] 2.11.2.0 4697 54665 119700 151670 0 1 13672680 18432001 1 130560 0 50754275 99.976 2456062 39559 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 14:28:59] CVMFS is ok
[2025-10-13 14:28:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 14:28:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 14:28:59] Further information can be found at the LHC@home message board.
[2025-10-13 14:28:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 14:28:59] Checking for apptainer binary...
[2025-10-13 14:28:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 14:28:59] Running /usr/bin/apptainer --version
[2025-10-13 14:28:59] apptainer version 1.3.2-1.el7
[2025-10-13 14:28:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 14:29:01] c-206-21.aglt2.org
[2025-10-13 14:29:01] apptainer works
[2025-10-13 14:29:01] Set ATHENA_PROC_NUMBER=8
[2025-10-13 14:29:01] Set ATHENA_CORE_NUMBER=8
[2025-10-13 14:29:01] Starting ATLAS job with PandaID=6839316739
[2025-10-13 14:29:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 16:12:29]  *** The last 200 lines of the pilot log: ***
[2025-10-13 16:12:29] 2025-10-13 20:11:31,038 | INFO     | monitor loop #471: job 0:6839316739 is in state 'finished'
[2025-10-13 16:12:29] 2025-10-13 20:11:31,038 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 16:12:29] 2025-10-13 20:11:31,597 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 16:12:29] 2025-10-13 20:11:31,603 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1645.9166666666667
[2025-10-13 16:12:29] 2025-10-13 20:11:31,606 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839316739/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 16:12:29] 2025-10-13 20:11:31,607 | INFO     | extracted standard info from prmon json
[2025-10-13 16:12:29] 2025-10-13 20:11:31,607 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 16:12:29] 2025-10-13 20:11:31,607 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 16:12:29] 2025-10-13 20:11:31,608 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 16:12:29] 2025-10-13 20:11:31,608 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 16:12:29] 2025-10-13 20:11:31,610 | INFO     | fitting pss+swap vs Time
[2025-10-13 16:12:29] 2025-10-13 20:11:31,610 | INFO     | sum of square deviations: 310052325.0
[2025-10-13 16:12:29] 2025-10-13 20:11:31,611 | INFO     | sum of deviations: -2762386616.500001
[2025-10-13 16:12:29] 2025-10-13 20:11:31,611 | INFO     | mean x: 1760383204.5
[2025-10-13 16:12:29] 2025-10-13 20:11:31,611 | INFO     | mean y: 2571695.07
[2025-10-13 16:12:29] 2025-10-13 20:11:31,611 | INFO     | -- intersect: 15686566337.013693
[2025-10-13 16:12:29] 2025-10-13 20:11:31,611 | INFO     | intersect: 15686566337.013693
[2025-10-13 16:12:29] 2025-10-13 20:11:31,611 | INFO     | chi2: 1.541545341677122
[2025-10-13 16:12:29] 2025-10-13 20:11:31,612 | INFO     | sum of square deviations: 265828240.0
[2025-10-13 16:12:29] 2025-10-13 20:11:31,612 | INFO     | sum of deviations: -1750623200.9999998
[2025-10-13 16:12:29] 2025-10-13 20:11:31,612 | INFO     | mean x: 1760383052.0
[2025-10-13 16:12:29] 2025-10-13 20:11:31,612 | INFO     | mean y: 2575186.9263157896
[2025-10-13 16:12:29] 2025-10-13 20:11:31,613 | INFO     | -- intersect: 11595652782.73927
[2025-10-13 16:12:29] 2025-10-13 20:11:31,613 | INFO     | intersect: 11595652782.73927
[2025-10-13 16:12:29] 2025-10-13 20:11:31,613 | INFO     | chi2: 1.5445198230678496
[2025-10-13 16:12:29] 2025-10-13 20:11:31,613 | INFO     | current chi2=1.5445198230678496 (change=-0.1929545184503916 %)
[2025-10-13 16:12:29] 2025-10-13 20:11:31,613 | INFO     | right removable region: 94
[2025-10-13 16:12:29] 2025-10-13 20:11:31,613 | INFO     | sum of square deviations: 265828240.0
[2025-10-13 16:12:29] 2025-10-13 20:11:31,614 | INFO     | sum of deviations: -17325231468.0
[2025-10-13 16:12:29] 2025-10-13 20:11:31,614 | INFO     | mean x: 1760383357.0
[2025-10-13 16:12:29] 2025-10-13 20:11:31,614 | INFO     | mean y: 2620740.3684210526
[2025-10-13 16:12:29] 2025-10-13 20:11:31,614 | INFO     | -- intersect: 114734784382.72589
[2025-10-13 16:12:29] 2025-10-13 20:11:31,614 | INFO     | intersect: 114734784382.72589
[2025-10-13 16:12:29] 2025-10-13 20:11:31,614 | INFO     | chi2: 0.10019601540277003
[2025-10-13 16:12:29] 2025-10-13 20:11:31,615 | INFO     | current chi2=0.10019601540277003 (change=93.50028749113783 %)
[2025-10-13 16:12:29] 2025-10-13 20:11:31,615 | INFO     | sum of square deviations: 226022842.5
[2025-10-13 16:12:29] 2025-10-13 20:11:31,615 | INFO     | sum of deviations: -16617493242.0
[2025-10-13 16:12:29] 2025-10-13 20:11:31,615 | INFO     | mean x: 1760383509.5
[2025-10-13 16:12:29] 2025-10-13 20:11:31,615 | INFO     | mean y: 2617859.711111111
[2025-10-13 16:12:29] 2025-10-13 20:11:31,616 | INFO     | -- intersect: 129428302223.64656
[2025-10-13 16:12:29] 2025-10-13 20:11:31,616 | INFO     | intersect: 129428302223.64656
[2025-10-13 16:12:29] 2025-10-13 20:11:31,616 | INFO     | chi2: 0.07651280378146319
[2025-10-13 16:12:29] 2025-10-13 20:11:31,616 | INFO     | current chi2=0.07651280378146319 (change=23.636879696367732 %)
[2025-10-13 16:12:29] 2025-10-13 20:11:31,616 | INFO     | left removable region: 20
[2025-10-13 16:12:29] 2025-10-13 20:11:31,616 | INFO     | sum of square deviations: 125630262.5
[2025-10-13 16:12:29] 2025-10-13 20:11:31,617 | INFO     | sum of deviations: -10968313986.000002
[2025-10-13 16:12:29] 2025-10-13 20:11:31,617 | INFO     | mean x: 1760383631.5
[2025-10-13 16:12:29] 2025-10-13 20:11:31,617 | INFO     | mean y: 2605841.4864864866
[2025-10-13 16:12:29] 2025-10-13 20:11:31,617 | INFO     | -- intersect: 153695195683.10147
[2025-10-13 16:12:29] 2025-10-13 20:11:31,617 | INFO     | intersect: 153695195683.10147
[2025-10-13 16:12:29] 2025-10-13 20:11:31,617 | INFO     | chi2: 0.06702203409822803
[2025-10-13 16:12:29] 2025-10-13 20:11:31,617 | INFO     | -- intersect: 153695195683.10147
[2025-10-13 16:12:29] 2025-10-13 20:11:31,618 | INFO     | current memory leak: -87.31 B/s (using 74 data points, chi2=0.07)
[2025-10-13 16:12:29] 2025-10-13 20:11:31,618 | INFO     | could have reported an average CPU frequency of 1828 MHz (7 samples)
[2025-10-13 16:12:29] 2025-10-13 20:11:31,618 | INFO     | ..............................
[2025-10-13 16:12:29] 2025-10-13 20:11:31,618 | INFO     | . Timing measurements:
[2025-10-13 16:12:29] 2025-10-13 20:11:31,618 | INFO     | . get job = 0 s
[2025-10-13 16:12:29] 2025-10-13 20:11:31,618 | INFO     | . initial setup = 2 s
[2025-10-13 16:12:29] 2025-10-13 20:11:31,618 | INFO     | . payload setup = 7 s
[2025-10-13 16:12:29] 2025-10-13 20:11:31,619 | INFO     | . stage-in = 0 s
[2025-10-13 16:12:29] 2025-10-13 20:11:31,619 | INFO     | . payload execution = 6100 s
[2025-10-13 16:12:29] 2025-10-13 20:11:31,619 | INFO     | . stage-out = 0 s
[2025-10-13 16:12:29] 2025-10-13 20:11:31,619 | INFO     | . log creation = 0 s
[2025-10-13 16:12:29] 2025-10-13 20:11:31,619 | INFO     | ..............................
[2025-10-13 16:12:29] 2025-10-13 20:11:31,702 | INFO     | 
[2025-10-13 16:12:29] 2025-10-13 20:11:31,702 | INFO     | job summary report
[2025-10-13 16:12:29] 2025-10-13 20:11:31,702 | INFO     | --------------------------------------------------
[2025-10-13 16:12:29] 2025-10-13 20:11:31,703 | INFO     | PanDA job id: 6839316739
[2025-10-13 16:12:29] 2025-10-13 20:11:31,703 | INFO     | task id: 46676269
[2025-10-13 16:12:29] 2025-10-13 20:11:31,703 | INFO     | errors: (none)
[2025-10-13 16:12:29] 2025-10-13 20:11:31,703 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 16:12:29] 2025-10-13 20:11:31,703 | INFO     | pilot state: finished 
[2025-10-13 16:12:29] 2025-10-13 20:11:31,703 | INFO     | transexitcode: 0
[2025-10-13 16:12:29] 2025-10-13 20:11:31,704 | INFO     | exeerrorcode: 0
[2025-10-13 16:12:29] 2025-10-13 20:11:31,704 | INFO     | exeerrordiag: 
[2025-10-13 16:12:29] 2025-10-13 20:11:31,704 | INFO     | exitcode: 0
[2025-10-13 16:12:29] 2025-10-13 20:11:31,704 | INFO     | exitmsg: OK
[2025-10-13 16:12:29] 2025-10-13 20:11:31,704 | INFO     | cpuconsumptiontime: 44769 s
[2025-10-13 16:12:29] 2025-10-13 20:11:31,704 | INFO     | nevents: 400
[2025-10-13 16:12:29] 2025-10-13 20:11:31,704 | INFO     | neventsw: 0
[2025-10-13 16:12:29] 2025-10-13 20:11:31,705 | INFO     | pid: 30046
[2025-10-13 16:12:29] 2025-10-13 20:11:31,705 | INFO     | pgrp: 30046
[2025-10-13 16:12:29] 2025-10-13 20:11:31,705 | INFO     | corecount: 8
[2025-10-13 16:12:29] 2025-10-13 20:11:31,705 | INFO     | event service: False
[2025-10-13 16:12:29] 2025-10-13 20:11:31,705 | INFO     | sizes: {0: 2348855, 5: 2349117, 11: 2349173, 6111: 2376142, 6112: 2385140, 6114: 2385196, 6119: 2385518}
[2025-10-13 16:12:29] 2025-10-13 20:11:31,705 | INFO     | --------------------------------------------------
[2025-10-13 16:12:29] 2025-10-13 20:11:31,706 | INFO     | 
[2025-10-13 16:12:29] 2025-10-13 20:11:31,706 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 16:12:29] 2025-10-13 20:11:31,729 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 16:12:29] 2025-10-13 20:11:31,730 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 16:12:29] 2025-10-13 20:11:31,730 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 16:12:29] 2025-10-13 20:11:31,730 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 16:12:29] 2025-10-13 20:11:31,730 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 16:12:29] 2025-10-13 20:11:31,731 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 16:12:29] 2025-10-13 20:11:31,731 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 16:12:29] 2025-10-13 20:11:31,731 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 16:12:29] 2025-10-13 20:11:31,731 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 16:12:29] 2025-10-13 20:11:31,731 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 16:12:29] 2025-10-13 20:11:31,731 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 16:12:29] 2025-10-13 20:11:31,732 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 16:12:29] 2025-10-13 20:11:31,732 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 16:12:29] 2025-10-13 20:11:31,732 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 16:12:29] 2025-10-13 20:11:31,732 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 16:12:29] 2025-10-13 20:11:31,732 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 16:12:29] 2025-10-13 20:11:31,732 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 16:12:29] 2025-10-13 20:11:31,733 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 16:12:29] 2025-10-13 20:11:31,733 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 16:12:29] 2025-10-13 20:11:31,733 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 16:12:29] 2025-10-13 20:11:31,733 | INFO     | job 6839316739 has completed (purged errors)
[2025-10-13 16:12:29] 2025-10-13 20:11:31,733 | INFO     | overall cleanup function is called
[2025-10-13 16:12:29] 2025-10-13 20:11:32,741 | INFO     | --- collectZombieJob: --- 10, [30046]
[2025-10-13 16:12:29] 2025-10-13 20:11:32,741 | INFO     | zombie collector waiting for pid 30046
[2025-10-13 16:12:29] 2025-10-13 20:11:32,741 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 16:12:29] 2025-10-13 20:11:32,741 | INFO     | collected zombie processes
[2025-10-13 16:12:29] 2025-10-13 20:11:32,741 | INFO     | will attempt to kill all subprocesses of pid=30046
[2025-10-13 16:12:29] 2025-10-13 20:11:32,843 | INFO     | process IDs to be killed: [30046] (in reverse order)
[2025-10-13 16:12:29] 2025-10-13 20:11:32,893 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 16:12:29] 2025-10-13 20:11:32,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 16:12:29] 2025-10-13 20:11:32,898 | INFO     | did not find any defunct processes belonging to 30046
[2025-10-13 16:12:29] 2025-10-13 20:11:32,902 | INFO     | did not find any defunct processes belonging to 30046
[2025-10-13 16:12:29] 2025-10-13 20:11:32,902 | INFO     | ready for new job
[2025-10-13 16:12:29] 2025-10-13 20:11:32,902 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 16:12:29] 2025-10-13 20:11:32,904 | INFO     | ***************************************
[2025-10-13 16:12:29] 2025-10-13 20:11:32,904 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 16:12:29] 2025-10-13 20:11:32,904 | INFO     | ***************************************
[2025-10-13 16:12:29] 2025-10-13 20:11:32,904 | INFO     | 
[2025-10-13 16:12:29] 2025-10-13 20:11:32,905 | INFO     | architecture information:
[2025-10-13 16:12:29] 2025-10-13 20:11:32,905 | INFO     | executing command: cat /etc/os-release
[2025-10-13 16:12:29] 2025-10-13 20:11:32,920 | INFO     | cat /etc/os-release:
[2025-10-13 16:12:29] NAME="CentOS Linux"
[2025-10-13 16:12:29] VERSION="7 (Core)"
[2025-10-13 16:12:29] ID="centos"
[2025-10-13 16:12:29] ID_LIKE="rhel fedora"
[2025-10-13 16:12:29] VERSION_ID="7"
[2025-10-13 16:12:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 16:12:29] ANSI_COLOR="0;31"
[2025-10-13 16:12:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 16:12:29] HOME_URL="https://www.centos.org/"
[2025-10-13 16:12:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 16:12:29] 
[2025-10-13 16:12:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 16:12:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 16:12:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 16:12:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 16:12:29] 
[2025-10-13 16:12:29] 2025-10-13 20:11:32,920 | INFO     | ***************************************
[2025-10-13 16:12:29] 2025-10-13 20:11:33,423 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 16:12:29] 2025-10-13 20:11:33,441 | INFO     | sufficient remaining disk space (29300359168 B)
[2025-10-13 16:12:29] 2025-10-13 20:11:33,441 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 16:12:29] 2025-10-13 20:11:33,442 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 16:12:29] 2025-10-13 20:11:33,442 | INFO     | update_server=False
[2025-10-13 16:12:29] 2025-10-13 20:11:33,442 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 16:12:29] 2025-10-13 20:11:33,442 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:12:29] 2025-10-13 20:11:33,443 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 16:12:29] 2025-10-13 20:11:33,443 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 16:12:29] 2025-10-13 20:11:33,519 | INFO     | all payload control threads have been joined
[2025-10-13 16:12:29] 2025-10-13 20:11:33,541 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 16:12:29] 2025-10-13 20:11:33,542 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 16:12:29] 2025-10-13 20:11:33,542 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:12:29] 2025-10-13 20:11:33,542 | INFO     | will abort loop
[2025-10-13 16:12:29] 2025-10-13 20:11:34,175 | INFO     | all job control threads have been joined
[2025-10-13 16:12:29] 2025-10-13 20:11:34,391 | INFO     | all data control threads have been joined
[2025-10-13 16:12:29] 2025-10-13 20:11:34,443 | INFO     | [job] retrieve thread has finished
[2025-10-13 16:12:29] 2025-10-13 20:11:34,446 | INFO     | [job] queue monitor thread has finished
[2025-10-13 16:12:29] 2025-10-13 20:11:34,456 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 16:12:29] 2025-10-13 20:11:34,459 | INFO     | [payload] validate_post thread has finished
[2025-10-13 16:12:29] 2025-10-13 20:11:34,525 | INFO     | [payload] control thread has finished
[2025-10-13 16:12:29] 2025-10-13 20:11:34,548 | INFO     | [job] job monitor thread has finished
[2025-10-13 16:12:29] 2025-10-13 20:11:34,566 | INFO     | [data] copytool_in thread has finished
[2025-10-13 16:12:29] 2025-10-13 20:11:34,858 | INFO     | [payload] failed_post thread has finished
[2025-10-13 16:12:29] 2025-10-13 20:11:35,181 | INFO     | [job] control thread has finished
[2025-10-13 16:12:29] 2025-10-13 20:11:35,281 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 16:12:29] 2025-10-13 20:11:35,376 | INFO     | [job] validate thread has finished
[2025-10-13 16:12:29] 2025-10-13 20:11:35,397 | INFO     | [data] control thread has finished
[2025-10-13 16:12:29] 2025-10-13 20:11:35,449 | INFO     | [data] copytool_out thread has finished
[2025-10-13 16:12:29] 2025-10-13 20:11:35,565 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 16:12:29] 2025-10-13 20:11:35,811 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 16:12:29] 2025-10-13 20:11:37,449 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 16:12:29] 2025-10-13 20:12:04,079 | INFO     | PID=23660 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 16:12:29] 2025-10-13 20:12:04,080 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 16:12:29] 2025-10-13 20:12:04,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 16:12:29] 2025-10-13 20:12:04,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 16:12:29] 2025-10-13 20:12:24,161 | INFO     | [monitor] cgroup control has ended
[2025-10-13 16:12:29] 2025-10-13 20:12:24,587 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140448391210816)>', '<ExcThread(monitor, started 140447443842816)>']
[2025-10-13 16:12:29] 2025-10-13 20:12:25,182 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 16:12:29] 2025-10-13 20:12:25,182 | INFO     | [monitor] control thread has ended
[2025-10-13 16:12:29] 2025-10-13 20:12:29,597 | INFO     | all workflow threads have been joined
[2025-10-13 16:12:29] 2025-10-13 20:12:29,598 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 16:12:29] 2025-10-13 20:12:29,598 | INFO     | traces error code: 0
[2025-10-13 16:12:29] 2025-10-13 20:12:29,598 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 16:12:29] 2025-10-13 20:12:29,693 [wrapper] ==== pilot stdout END ====
[2025-10-13 16:12:29] 2025-10-13 20:12:29,697 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 16:12:29] 2025-10-13 20:12:29,701 [wrapper] pilotpid: 23660
[2025-10-13 16:12:29] 2025-10-13 20:12:29,705 [wrapper] Pilot exit status: 0
[2025-10-13 16:12:29] 2025-10-13 20:12:29,720 [wrapper] pandaids: 6839316739
[2025-10-13 16:12:29] 2025-10-13 20:12:29,767 [wrapper] cleanup supervisor_pilot  5208 23661
[2025-10-13 16:12:29] 2025-10-13 20:12:29,770 [wrapper] Test setup, not cleaning
[2025-10-13 16:12:29] 2025-10-13 20:12:29,774 [wrapper] apfmon messages muted
[2025-10-13 16:12:29] 2025-10-13 20:12:29,778 [wrapper] ==== wrapper stdout END ====
[2025-10-13 16:12:29] 2025-10-13 20:12:29,781 [wrapper] ==== wrapper stderr END ====
[2025-10-13 16:12:29]  *** Error codes and diagnostics ***
[2025-10-13 16:12:29]     "exeErrorCode": 0,
[2025-10-13 16:12:29]     "exeErrorDiag": "",
[2025-10-13 16:12:29]     "pilotErrorCode": 0,
[2025-10-13 16:12:29]     "pilotErrorDiag": "",
[2025-10-13 16:12:29]  *** Listing of results directory ***
[2025-10-13 16:12:29] total 405428
[2025-10-13 16:12:29] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 21:53 pilot3.tar.gz
[2025-10-13 16:12:29] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 22:35 queuedata.json
[2025-10-13 16:12:29] -rwx------ 1 boincer umatlas     36292 Oct 11 22:37 runpilot2-wrapper.sh
[2025-10-13 16:12:29] -rw-r--r-- 1 boincer umatlas       100 Oct 13 14:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 16:12:29] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 14:28 run_atlas
[2025-10-13 16:12:29] -rw-r--r-- 1 boincer umatlas       105 Oct 13 14:28 job.xml
[2025-10-13 16:12:29] -rw-r--r-- 2 boincer umatlas 219486583 Oct 13 14:28 EVNT.46676267._003185.pool.root.1
[2025-10-13 16:12:29] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 14:28 start_atlas.sh
[2025-10-13 16:12:29] drwxrwx--x 2 boincer umatlas      4096 Oct 13 14:28 shared
[2025-10-13 16:12:29] -rw-r--r-- 2 boincer umatlas    569682 Oct 13 14:28 input.tar.gz
[2025-10-13 16:12:29] -rw-r--r-- 1 boincer umatlas         0 Oct 13 14:28 boinc_lockfile
[2025-10-13 16:12:29] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 14:29 pandaJob.out
[2025-10-13 16:12:29] -rw------- 1 boincer umatlas    972799 Oct 13 14:29 agis_schedconf.cvmfs.json
[2025-10-13 16:12:29] -rw------- 1 boincer umatlas   1560580 Oct 13 14:29 agis_ddmendpoints.agis.ALL.json
[2025-10-13 16:12:29] drwx------ 5 boincer umatlas      4096 Oct 13 14:29 pilot3
[2025-10-13 16:12:29] -rw-r--r-- 1 boincer umatlas      5951 Oct 13 16:02 init_data.xml
[2025-10-13 16:12:29] -rw------- 1 boincer umatlas 189335125 Oct 13 16:10 HITS.46676269._069409.pool.root.1
[2025-10-13 16:12:29] -rw-r--r-- 1 boincer umatlas       529 Oct 13 16:11 boinc_task_state.xml
[2025-10-13 16:12:29] -rw------- 1 boincer umatlas      1046 Oct 13 16:11 memory_monitor_summary.json
[2025-10-13 16:12:29] -rw------- 1 boincer umatlas    336419 Oct 13 16:11 log.46676269._069409.job.log.tgz.1
[2025-10-13 16:12:29] -rw------- 1 boincer umatlas      7852 Oct 13 16:11 heartbeat.json
[2025-10-13 16:12:29] -rw------- 1 boincer umatlas        95 Oct 13 16:12 pilot_heartbeat.json
[2025-10-13 16:12:29] -rw-r--r-- 1 boincer umatlas        27 Oct 13 16:12 wrapper_checkpoint.txt
[2025-10-13 16:12:29] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 16:12 boinc_mmap_file
[2025-10-13 16:12:29] -rw------- 1 boincer umatlas      4932 Oct 13 16:12 pilotlog.txt
[2025-10-13 16:12:29] -rw------- 1 boincer umatlas    883081 Oct 13 16:12 log.46676269._069409.job.log.1
[2025-10-13 16:12:29] -rw------- 1 boincer umatlas       357 Oct 13 16:12 output.list
[2025-10-13 16:12:29] -rw-r--r-- 1 boincer umatlas       620 Oct 13 16:12 runtime_log
[2025-10-13 16:12:29] -rw------- 1 boincer umatlas   1239040 Oct 13 16:12 result.tar.gz
[2025-10-13 16:12:29] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 16:12 runtime_log.err
[2025-10-13 16:12:29] -rw------- 1 boincer umatlas       659 Oct 13 16:12 2juKDmv80R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9LiNDmEzlAJm.diag
[2025-10-13 16:12:29] -rw-r--r-- 1 boincer umatlas     21096 Oct 13 16:12 stderr.txt
[2025-10-13 16:12:29] HITS file was successfully produced:
[2025-10-13 16:12:29] -rw------- 1 boincer umatlas 189335125 Oct 13 16:10 shared/HITS.pool.root.1
[2025-10-13 16:12:29]  *** Contents of shared directory: ***
[2025-10-13 16:12:29] total 401032
[2025-10-13 16:12:29] -rw-r--r-- 2 boincer umatlas 219486583 Oct 13 14:28 ATLAS.root_0
[2025-10-13 16:12:29] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 14:28 start_atlas.sh
[2025-10-13 16:12:29] -rw-r--r-- 2 boincer umatlas    569682 Oct 13 14:28 input.tar.gz
[2025-10-13 16:12:29] -rw------- 1 boincer umatlas 189335125 Oct 13 16:10 HITS.pool.root.1
[2025-10-13 16:12:29] -rw------- 1 boincer umatlas   1239040 Oct 13 16:12 result.tar.gz
16:12:31 (19889): run_atlas exited; CPU time 44579.493916
16:12:31 (19889): called boinc_finish(0)

</stderr_txt>
]]>

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