Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:14:17 (1704319): wrapper (7.7.26015): starting
14:14:17 (1704319): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 14:14:17] Arguments: --nthreads 12
[2025-10-13 14:14:17] Threads: 12
[2025-10-13 14:14:17] Checking for CVMFS
[2025-10-13 14:14:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 14:14:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 14:14:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 14:14:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 14:14:18] 2.12.6.0 3376676 86704 295700 151669 0 14 16614294 18491393 15392 16776704 0 104773378 99.426 156889767 31971 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 14:14:18] CVMFS is ok
[2025-10-13 14:14:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 14:14:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 14:14:18] Further information can be found at the LHC@home message board.
[2025-10-13 14:14:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 14:14:18] Checking for apptainer binary...
[2025-10-13 14:14:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 14:14:18] Running /usr/bin/apptainer --version
[2025-10-13 14:14:18] apptainer version 1.4.1-1.el9
[2025-10-13 14:14:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 14:14:19] c-8-38.aglt2.org
[2025-10-13 14:14:19] apptainer works
[2025-10-13 14:14:19] Set ATHENA_PROC_NUMBER=12
[2025-10-13 14:14:19] Set ATHENA_CORE_NUMBER=12
[2025-10-13 14:14:19] Starting ATLAS job with PandaID=6843280446
[2025-10-13 14:14:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 15:46:09]  *** The last 200 lines of the pilot log: ***
[2025-10-13 15:46:09]  protocol_id=None
[2025-10-13 15:46:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 15:46:09]  replicas=None
[2025-10-13 15:46:09]  scope=mc23_13p6TeV
[2025-10-13 15:46:09]  status=None
[2025-10-13 15:46:09]  status_code=0
[2025-10-13 15:46:09]  storage_token=
[2025-10-13 15:46:09]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6843280446/log.46676269._096949.job.log.tgz.1
[2025-10-13 15:46:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2e/c1/log.46676269._096949.job.log.tgz.1
[2025-10-13 15:46:09]  workdir=None
[2025-10-13 15:46:09] ]
[2025-10-13 15:46:09] 2025-10-13 19:45:15,698 | INFO     | transferring file log.46676269._096949.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6843280446/log.46676269._096949.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 15:46:09] 2025-10-13 19:45:15,698 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6843280446/log.46676269._096949.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._096949.job
[2025-10-13 15:46:09] 2025-10-13 19:45:15,718 | INFO     | adding to output.list: log.46676269._096949.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2e/c1/log.46676269._096949.job.log.tg
[2025-10-13 15:46:09] 2025-10-13 19:45:15,719 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 15:46:09] 2025-10-13 19:45:15,720 | INFO     | summary of transferred files:
[2025-10-13 15:46:09] 2025-10-13 19:45:15,720 | INFO     |  -- lfn=log.46676269._096949.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 15:46:09] 2025-10-13 19:45:15,720 | INFO     | stage-out finished correctly
[2025-10-13 15:46:09] 2025-10-13 19:45:15,833 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 15:46:09] 2025-10-13 19:45:15,872 | INFO     | time since job start (5421s) is within the limit (172800.0s)
[2025-10-13 15:46:09] 2025-10-13 19:45:15,946 | INFO     | job 6843280446 has state=finished
[2025-10-13 15:46:09] 2025-10-13 19:45:15,946 | INFO     | preparing for final server update for job 6843280446 in state='finished'
[2025-10-13 15:46:09] 2025-10-13 19:45:15,947 | INFO     | this job has now completed (state=finished)
[2025-10-13 15:46:09] 2025-10-13 19:45:15,947 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 15:46:09] 2025-10-13 19:45:15,947 | INFO     | log transfer has been attempted: DONE
[2025-10-13 15:46:09] 2025-10-13 19:45:15,947 | INFO     | job 6843280446 has finished - writing final server update
[2025-10-13 15:46:09] 2025-10-13 19:45:15,948 | INFO     | total number of processed events: 400 (read)
[2025-10-13 15:46:09] 2025-10-13 19:45:15,949 | INFO     | executing command: lscpu
[2025-10-13 15:46:09] 2025-10-13 19:45:16,004 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 15:46:09] 2025-10-13 19:45:17,879 | INFO     | time since job start (5423s) is within the limit (172800.0s)
[2025-10-13 15:46:09] 2025-10-13 19:45:17,928 | INFO     | monitor loop #376: job 0:6843280446 is in state 'finished'
[2025-10-13 15:46:09] 2025-10-13 19:45:17,929 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 15:46:09] 2025-10-13 19:45:19,885 | INFO     | time since job start (5425s) is within the limit (172800.0s)
[2025-10-13 15:46:09] 2025-10-13 19:45:20,434 | INFO     | monitor loop #377: job 0:6843280446 is in state 'finished'
[2025-10-13 15:46:09] 2025-10-13 19:45:20,435 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 15:46:09] 2025-10-13 19:45:21,425 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 15:46:09] 2025-10-13 19:45:21,431 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1489750000005
[2025-10-13 15:46:09] 2025-10-13 19:45:21,438 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6843280446/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 15:46:09] 2025-10-13 19:45:21,439 | INFO     | extracted standard info from prmon json
[2025-10-13 15:46:09] 2025-10-13 19:45:21,439 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 15:46:09] 2025-10-13 19:45:21,439 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 15:46:09] 2025-10-13 19:45:21,439 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 15:46:09] 2025-10-13 19:45:21,440 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 15:46:09] 2025-10-13 19:45:21,442 | INFO     | fitting pss+swap vs Time
[2025-10-13 15:46:09] 2025-10-13 19:45:21,443 | INFO     | sum of square deviations: 164746246.3950618
[2025-10-13 15:46:09] 2025-10-13 19:45:21,443 | INFO     | sum of deviations: -12883716881.62963
[2025-10-13 15:46:09] 2025-10-13 19:45:21,443 | INFO     | mean x: 1760382114.0864198
[2025-10-13 15:46:09] 2025-10-13 19:45:21,444 | INFO     | mean y: 2658870.5185185187
[2025-10-13 15:46:09] 2025-10-13 19:45:21,444 | INFO     | -- intersect: 137670528443.624
[2025-10-13 15:46:09] 2025-10-13 19:45:21,444 | INFO     | intersect: 137670528443.624
[2025-10-13 15:46:09] 2025-10-13 19:45:21,444 | INFO     | chi2: 0.3189276208414644
[2025-10-13 15:46:09] 2025-10-13 19:45:21,444 | INFO     | -- intersect: 137670528443.624
[2025-10-13 15:46:09] 2025-10-13 19:45:21,444 | INFO     | current memory leak: -78.20 B/s (using 81 data points, chi2=0.32)
[2025-10-13 15:46:09] 2025-10-13 19:45:21,445 | INFO     | could have reported an average CPU frequency of 2600 MHz (6 samples)
[2025-10-13 15:46:09] 2025-10-13 19:45:21,445 | INFO     | ..............................
[2025-10-13 15:46:09] 2025-10-13 19:45:21,445 | INFO     | . Timing measurements:
[2025-10-13 15:46:09] 2025-10-13 19:45:21,445 | INFO     | . get job = 0 s
[2025-10-13 15:46:09] 2025-10-13 19:45:21,445 | INFO     | . initial setup = 3 s
[2025-10-13 15:46:09] 2025-10-13 19:45:21,446 | INFO     | . payload setup = 20 s
[2025-10-13 15:46:09] 2025-10-13 19:45:21,446 | INFO     | . stage-in = 0 s
[2025-10-13 15:46:09] 2025-10-13 19:45:21,446 | INFO     | . payload execution = 5361 s
[2025-10-13 15:46:09] 2025-10-13 19:45:21,446 | INFO     | . stage-out = 1 s
[2025-10-13 15:46:09] 2025-10-13 19:45:21,446 | INFO     | . log creation = 0 s
[2025-10-13 15:46:09] 2025-10-13 19:45:21,446 | INFO     | ..............................
[2025-10-13 15:46:09] 2025-10-13 19:45:21,560 | INFO     | 
[2025-10-13 15:46:09] 2025-10-13 19:45:21,561 | INFO     | job summary report
[2025-10-13 15:46:09] 2025-10-13 19:45:21,561 | INFO     | --------------------------------------------------
[2025-10-13 15:46:09] 2025-10-13 19:45:21,561 | INFO     | PanDA job id: 6843280446
[2025-10-13 15:46:09] 2025-10-13 19:45:21,561 | INFO     | task id: 46676269
[2025-10-13 15:46:09] 2025-10-13 19:45:21,561 | INFO     | errors: (none)
[2025-10-13 15:46:09] 2025-10-13 19:45:21,561 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 15:46:09] 2025-10-13 19:45:21,561 | INFO     | pilot state: finished 
[2025-10-13 15:46:09] 2025-10-13 19:45:21,562 | INFO     | transexitcode: 0
[2025-10-13 15:46:09] 2025-10-13 19:45:21,562 | INFO     | exeerrorcode: 0
[2025-10-13 15:46:09] 2025-10-13 19:45:21,562 | INFO     | exeerrordiag: 
[2025-10-13 15:46:09] 2025-10-13 19:45:21,562 | INFO     | exitcode: 0
[2025-10-13 15:46:09] 2025-10-13 19:45:21,562 | INFO     | exitmsg: OK
[2025-10-13 15:46:09] 2025-10-13 19:45:21,562 | INFO     | cpuconsumptiontime: 47342 s
[2025-10-13 15:46:09] 2025-10-13 19:45:21,562 | INFO     | nevents: 400
[2025-10-13 15:46:09] 2025-10-13 19:45:21,562 | INFO     | neventsw: 0
[2025-10-13 15:46:09] 2025-10-13 19:45:21,562 | INFO     | pid: 1715674
[2025-10-13 15:46:09] 2025-10-13 19:45:21,563 | INFO     | pgrp: 1715674
[2025-10-13 15:46:09] 2025-10-13 19:45:21,563 | INFO     | corecount: 12
[2025-10-13 15:46:09] 2025-10-13 19:45:21,563 | INFO     | event service: False
[2025-10-13 15:46:09] 2025-10-13 19:45:21,563 | INFO     | sizes: {0: 2348635, 1: 2348834, 2: 2348834, 12: 2348862, 17: 2349152, 23: 2349180, 5386: 2375872, 5388: 2384926, 5394: 2385064}
[2025-10-13 15:46:09] 2025-10-13 19:45:21,563 | INFO     | --------------------------------------------------
[2025-10-13 15:46:09] 2025-10-13 19:45:21,563 | INFO     | 
[2025-10-13 15:46:09] 2025-10-13 19:45:21,563 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 15:46:09] 2025-10-13 19:45:21,584 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 15:46:09] 2025-10-13 19:45:21,585 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 15:46:09] 2025-10-13 19:45:21,585 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 15:46:09] 2025-10-13 19:45:21,585 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 15:46:09] 2025-10-13 19:45:21,585 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 15:46:09] 2025-10-13 19:45:21,585 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 15:46:09] 2025-10-13 19:45:21,585 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 15:46:09] 2025-10-13 19:45:21,585 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 15:46:09] 2025-10-13 19:45:21,586 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 15:46:09] 2025-10-13 19:45:21,586 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 15:46:09] 2025-10-13 19:45:21,586 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 15:46:09] 2025-10-13 19:45:21,586 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 15:46:09] 2025-10-13 19:45:21,586 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 15:46:09] 2025-10-13 19:45:21,586 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 15:46:09] 2025-10-13 19:45:21,586 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 15:46:09] 2025-10-13 19:45:21,586 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 15:46:09] 2025-10-13 19:45:21,587 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 15:46:09] 2025-10-13 19:45:21,587 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 15:46:09] 2025-10-13 19:45:21,587 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 15:46:09] 2025-10-13 19:45:21,587 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 15:46:09] 2025-10-13 19:45:21,587 | INFO     | job 6843280446 has completed (purged errors)
[2025-10-13 15:46:09] 2025-10-13 19:45:21,587 | INFO     | overall cleanup function is called
[2025-10-13 15:46:09] 2025-10-13 19:45:22,596 | INFO     | --- collectZombieJob: --- 10, [1715674]
[2025-10-13 15:46:09] 2025-10-13 19:45:22,596 | INFO     | zombie collector waiting for pid 1715674
[2025-10-13 15:46:09] 2025-10-13 19:45:22,597 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 15:46:09] 2025-10-13 19:45:22,597 | INFO     | collected zombie processes
[2025-10-13 15:46:09] 2025-10-13 19:45:22,597 | INFO     | will attempt to kill all subprocesses of pid=1715674
[2025-10-13 15:46:09] 2025-10-13 19:45:22,972 | INFO     | process IDs to be killed: [1715674] (in reverse order)
[2025-10-13 15:46:09] 2025-10-13 19:45:23,094 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 15:46:09] 2025-10-13 19:45:23,095 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 15:46:09] 2025-10-13 19:45:23,107 | INFO     | did not find any defunct processes belonging to 1715674
[2025-10-13 15:46:09] 2025-10-13 19:45:23,123 | INFO     | did not find any defunct processes belonging to 1715674
[2025-10-13 15:46:09] 2025-10-13 19:45:23,123 | INFO     | ready for new job
[2025-10-13 15:46:09] 2025-10-13 19:45:23,123 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 15:46:09] 2025-10-13 19:45:23,125 | INFO     | ***************************************
[2025-10-13 15:46:09] 2025-10-13 19:45:23,125 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 15:46:09] 2025-10-13 19:45:23,126 | INFO     | ***************************************
[2025-10-13 15:46:09] 2025-10-13 19:45:23,126 | INFO     | 
[2025-10-13 15:46:09] 2025-10-13 19:45:23,140 | INFO     | architecture information:
[2025-10-13 15:46:09] 2025-10-13 19:45:23,141 | INFO     | executing command: cat /etc/os-release
[2025-10-13 15:46:09] 2025-10-13 19:45:23,156 | INFO     | cat /etc/os-release:
[2025-10-13 15:46:09] NAME="CentOS Linux"
[2025-10-13 15:46:09] VERSION="7 (Core)"
[2025-10-13 15:46:09] ID="centos"
[2025-10-13 15:46:09] ID_LIKE="rhel fedora"
[2025-10-13 15:46:09] VERSION_ID="7"
[2025-10-13 15:46:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 15:46:09] ANSI_COLOR="0;31"
[2025-10-13 15:46:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 15:46:09] HOME_URL="https://www.centos.org/"
[2025-10-13 15:46:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 15:46:09] 
[2025-10-13 15:46:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 15:46:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 15:46:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 15:46:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 15:46:09] 
[2025-10-13 15:46:09] 2025-10-13 19:45:23,157 | INFO     | ***************************************
[2025-10-13 15:46:09] 2025-10-13 19:45:23,660 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 15:46:09] 2025-10-13 19:45:23,675 | INFO     | sufficient remaining disk space (96597966848 B)
[2025-10-13 15:46:09] 2025-10-13 19:45:23,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 15:46:09] 2025-10-13 19:45:23,676 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 15:46:09] 2025-10-13 19:45:23,676 | INFO     | update_server=False
[2025-10-13 15:46:09] 2025-10-13 19:45:23,676 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 15:46:09] 2025-10-13 19:45:23,705 | INFO     | all job control threads have been joined
[2025-10-13 15:46:09] 2025-10-13 19:45:23,845 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 15:46:09] 2025-10-13 19:45:23,967 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:46:09] 2025-10-13 19:45:23,968 | INFO     | aborting loop
[2025-10-13 15:46:09] 2025-10-13 19:45:24,203 | INFO     | all payload control threads have been joined
[2025-10-13 15:46:09] 2025-10-13 19:45:24,636 | INFO     | all data control threads have been joined
[2025-10-13 15:46:09] 2025-10-13 19:45:24,681 | INFO     | [job] retrieve thread has finished
[2025-10-13 15:46:09] 2025-10-13 19:45:24,710 | INFO     | [job] control thread has finished
[2025-10-13 15:46:09] 2025-10-13 19:45:24,717 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 15:46:09] 2025-10-13 19:45:24,972 | INFO     | [job] job monitor thread has finished
[2025-10-13 15:46:09] 2025-10-13 19:45:24,983 | INFO     | [payload] failed_post thread has finished
[2025-10-13 15:46:09] 2025-10-13 19:45:25,205 | INFO     | [payload] validate_post thread has finished
[2025-10-13 15:46:09] 2025-10-13 19:45:25,209 | INFO     | [payload] control thread has finished
[2025-10-13 15:46:09] 2025-10-13 19:45:25,641 | INFO     | [data] control thread has finished
[2025-10-13 15:46:09] 2025-10-13 19:45:25,748 | INFO     | [data] copytool_in thread has finished
[2025-10-13 15:46:09] 2025-10-13 19:45:25,850 | INFO     | [data] copytool_out thread has finished
[2025-10-13 15:46:09] 2025-10-13 19:45:25,957 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 15:46:09] 2025-10-13 19:45:25,958 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 15:46:09] 2025-10-13 19:45:25,958 | INFO     | [job] validate thread has finished
[2025-10-13 15:46:09] 2025-10-13 19:45:26,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 15:46:09] 2025-10-13 19:45:26,570 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:46:09] 2025-10-13 19:45:27,576 | INFO     | [job] queue monitor thread has finished
[2025-10-13 15:46:09] 2025-10-13 19:45:30,470 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 15:46:09] 2025-10-13 19:45:33,928 | INFO     | job.realtimelogging is not enabled
[2025-10-13 15:46:09] 2025-10-13 19:45:34,933 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 15:46:09] 2025-10-13 19:45:53,461 | INFO     | PID=1708898 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 15:46:09] 2025-10-13 19:45:53,462 | INFO     | .. there are 24 such processes running
[2025-10-13 15:46:09] 2025-10-13 19:45:53,467 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 15:46:09] 2025-10-13 19:45:53,467 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 15:46:09] 2025-10-13 19:45:53,467 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 15:46:09] 2025-10-13 19:46:02,736 | INFO     | [monitor] cgroup control has ended
[2025-10-13 15:46:09] 2025-10-13 19:46:03,434 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140517139691328)>', '<ExcThread(monitor, started 140516565972736)>']
[2025-10-13 15:46:09] 2025-10-13 19:46:03,528 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 15:46:09] 2025-10-13 19:46:03,529 | INFO     | [monitor] control thread has ended
[2025-10-13 15:46:09] 2025-10-13 19:46:08,459 | INFO     | all workflow threads have been joined
[2025-10-13 15:46:09] 2025-10-13 19:46:08,460 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 15:46:09] 2025-10-13 19:46:08,460 | INFO     | traces error code: 0
[2025-10-13 15:46:09] 2025-10-13 19:46:08,460 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 15:46:09] 2025-10-13 19:46:08,635 [wrapper] ==== pilot stdout END ====
[2025-10-13 15:46:09] 2025-10-13 19:46:08,638 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 15:46:09] 2025-10-13 19:46:08,641 [wrapper] pilotpid: 1708898
[2025-10-13 15:46:09] 2025-10-13 19:46:08,644 [wrapper] Pilot exit status: 0
[2025-10-13 15:46:09] 2025-10-13 19:46:08,667 [wrapper] pandaids: 6843280446
[2025-10-13 15:46:09] 2025-10-13 19:46:08,732 [wrapper] cleanup supervisor_pilot 2009482 1708899
[2025-10-13 15:46:09] 2025-10-13 19:46:08,735 [wrapper] Test setup, not cleaning
[2025-10-13 15:46:09] 2025-10-13 19:46:08,747 [wrapper] apfmon messages muted
[2025-10-13 15:46:09] 2025-10-13 19:46:08,750 [wrapper] ==== wrapper stdout END ====
[2025-10-13 15:46:09] 2025-10-13 19:46:08,753 [wrapper] ==== wrapper stderr END ====
[2025-10-13 15:46:09]  *** Error codes and diagnostics ***
[2025-10-13 15:46:09]     "exeErrorCode": 0,
[2025-10-13 15:46:09]     "exeErrorDiag": "",
[2025-10-13 15:46:09]     "pilotErrorCode": 0,
[2025-10-13 15:46:09]     "pilotErrorDiag": "",
[2025-10-13 15:46:09]  *** Listing of results directory ***
[2025-10-13 15:46:09] total 417412
[2025-10-13 15:46:09] -rw-r--r--. 1 boincer umatlas    557409 Oct 13 13:57 pilot3.tar.gz
[2025-10-13 15:46:09] -rw-r--r--. 1 boincer umatlas      5112 Oct 13 14:11 queuedata.json
[2025-10-13 15:46:09] -rwx------. 1 boincer umatlas     36292 Oct 13 14:13 runpilot2-wrapper.sh
[2025-10-13 15:46:09] -rw-r--r--. 1 boincer umatlas       100 Oct 13 14:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 15:46:09] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 14:14 run_atlas
[2025-10-13 15:46:09] -rw-r--r--. 1 boincer umatlas       105 Oct 13 14:14 job.xml
[2025-10-13 15:46:09] -rw-r--r--. 2 boincer umatlas 222763767 Oct 13 14:14 EVNT.46676267._002545.pool.root.1
[2025-10-13 15:46:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 14:14 start_atlas.sh
[2025-10-13 15:46:09] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 14:14 shared
[2025-10-13 15:46:09] -rw-r--r--. 2 boincer umatlas    569688 Oct 13 14:14 input.tar.gz
[2025-10-13 15:46:09] -rw-r--r--. 1 boincer umatlas         0 Oct 13 14:14 boinc_lockfile
[2025-10-13 15:46:09] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 14:14 pandaJob.out
[2025-10-13 15:46:09] -rw-------. 1 boincer umatlas    972799 Oct 13 14:14 agis_schedconf.cvmfs.json
[2025-10-13 15:46:09] -rw-------. 1 boincer umatlas   1560580 Oct 13 14:14 agis_ddmendpoints.agis.ALL.json
[2025-10-13 15:46:09] drwx------. 5 boincer umatlas      4096 Oct 13 14:14 pilot3
[2025-10-13 15:46:09] -rw-r--r--. 1 boincer umatlas       530 Oct 13 15:44 boinc_task_state.xml
[2025-10-13 15:46:09] -rw-------. 1 boincer umatlas 198426396 Oct 13 15:44 HITS.46676269._096949.pool.root.1
[2025-10-13 15:46:09] -rw-------. 1 boincer umatlas      1036 Oct 13 15:45 memory_monitor_summary.json
[2025-10-13 15:46:09] -rw-------. 1 boincer umatlas    409571 Oct 13 15:45 log.46676269._096949.job.log.tgz.1
[2025-10-13 15:46:09] -rw-------. 1 boincer umatlas      7818 Oct 13 15:45 heartbeat.json
[2025-10-13 15:46:09] -rw-r--r--. 1 boincer umatlas      6659 Oct 13 15:45 init_data.xml
[2025-10-13 15:46:09] -rw-------. 1 boincer umatlas        95 Oct 13 15:45 pilot_heartbeat.json
[2025-10-13 15:46:09] -rw-r--r--. 1 boincer umatlas        27 Oct 13 15:46 wrapper_checkpoint.txt
[2025-10-13 15:46:09] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 15:46 boinc_mmap_file
[2025-10-13 15:46:09] -rw-------. 1 boincer umatlas      4896 Oct 13 15:46 pilotlog.txt
[2025-10-13 15:46:09] -rw-------. 1 boincer umatlas    764044 Oct 13 15:46 log.46676269._096949.job.log.1
[2025-10-13 15:46:09] -rw-------. 1 boincer umatlas       357 Oct 13 15:46 output.list
[2025-10-13 15:46:09] -rw-r--r--. 1 boincer umatlas       620 Oct 13 15:46 runtime_log
[2025-10-13 15:46:09] -rw-------. 1 boincer umatlas   1187840 Oct 13 15:46 result.tar.gz
[2025-10-13 15:46:09] -rw-r--r--. 1 boincer umatlas      8695 Oct 13 15:46 runtime_log.err
[2025-10-13 15:46:09] -rw-------. 1 boincer umatlas       651 Oct 13 15:46 8XlKDmUEcS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm9kVMDmruUhZn.diag
[2025-10-13 15:46:09] -rw-r--r--. 1 boincer umatlas     21801 Oct 13 15:46 stderr.txt
[2025-10-13 15:46:09] HITS file was successfully produced:
[2025-10-13 15:46:09] -rw-------. 1 boincer umatlas 198426396 Oct 13 15:44 shared/HITS.pool.root.1
[2025-10-13 15:46:09]  *** Contents of shared directory: ***
[2025-10-13 15:46:09] total 413064
[2025-10-13 15:46:09] -rw-r--r--. 2 boincer umatlas 222763767 Oct 13 14:14 ATLAS.root_0
[2025-10-13 15:46:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 14:14 start_atlas.sh
[2025-10-13 15:46:09] -rw-r--r--. 2 boincer umatlas    569688 Oct 13 14:14 input.tar.gz
[2025-10-13 15:46:09] -rw-------. 1 boincer umatlas 198426396 Oct 13 15:44 HITS.pool.root.1
[2025-10-13 15:46:09] -rw-------. 1 boincer umatlas   1187840 Oct 13 15:46 result.tar.gz
15:46:10 (1704319): run_atlas exited; CPU time 47521.081241
15:46:10 (1704319): called boinc_finish(0)

</stderr_txt>
]]>

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