Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:04:56 (247904): wrapper (7.7.26015): starting
13:04:56 (247904): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 13:04:56] Arguments: --nthreads 8
[2025-10-13 13:04:56] Threads: 8
[2025-10-13 13:04:56] Checking for CVMFS
[2025-10-13 13:04:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 13:04:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 13:04:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 13:04:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 13:04:56] 2.13.2.0 1395644 130960 471868 151667 3 759 22777612 32935937 15011 16776704 0 172463889 99.561 200998993 27917 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 13:04:56] CVMFS is ok
[2025-10-13 13:04:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 13:04:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 13:04:56] Further information can be found at the LHC@home message board.
[2025-10-13 13:04:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 13:04:56] Checking for apptainer binary...
[2025-10-13 13:04:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 13:04:56] Running /usr/bin/apptainer --version
[2025-10-13 13:04:56] apptainer version 1.4.3-1.el9
[2025-10-13 13:04:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 13:04:57] c6-6-39-2.aglt2.org
[2025-10-13 13:04:57] apptainer works
[2025-10-13 13:04:57] Set ATHENA_PROC_NUMBER=8
[2025-10-13 13:04:57] Set ATHENA_CORE_NUMBER=8
[2025-10-13 13:04:57] Starting ATLAS job with PandaID=6832199199
[2025-10-13 13:04:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 14:32:25]  *** The last 200 lines of the pilot log: ***
[2025-10-13 14:32:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3e/c9/log.46376905._100987.job.log.tgz.1
[2025-10-13 14:32:25]  workdir=None
[2025-10-13 14:32:25] ]
[2025-10-13 14:32:25] 2025-10-13 18:31:14,415 | INFO     | transferring file log.46376905._100987.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6832199199/log.46376905._100987.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 14:32:25] 2025-10-13 18:31:14,416 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6832199199/log.46376905._100987.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._100987.job
[2025-10-13 14:32:25] 2025-10-13 18:31:14,439 | INFO     | adding to output.list: log.46376905._100987.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3e/c9/log.46376905._100987.job.log.tg
[2025-10-13 14:32:25] 2025-10-13 18:31:14,440 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 14:32:25] 2025-10-13 18:31:14,440 | INFO     | summary of transferred files:
[2025-10-13 14:32:25] 2025-10-13 18:31:14,440 | INFO     |  -- lfn=log.46376905._100987.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 14:32:25] 2025-10-13 18:31:14,441 | INFO     | stage-out finished correctly
[2025-10-13 14:32:25] 2025-10-13 18:31:15,685 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 14:32:25] 2025-10-13 18:31:16,316 | INFO     | time since job start (5166s) is within the limit (172800.0s)
[2025-10-13 14:32:25] 2025-10-13 18:31:18,322 | INFO     | time since job start (5168s) is within the limit (172800.0s)
[2025-10-13 14:32:25] 2025-10-13 18:31:18,460 | INFO     | job 6832199199 has state=finished
[2025-10-13 14:32:25] 2025-10-13 18:31:18,460 | INFO     | preparing for final server update for job 6832199199 in state='finished'
[2025-10-13 14:32:25] 2025-10-13 18:31:18,524 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-13 14:32:25] 2025-10-13 18:31:18,525 | INFO     | this job has now completed (state=finished)
[2025-10-13 14:32:25] 2025-10-13 18:31:18,525 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 14:32:25] 2025-10-13 18:31:18,525 | INFO     | log transfer has been attempted: DONE
[2025-10-13 14:32:25] 2025-10-13 18:31:18,525 | INFO     | job 6832199199 has finished - writing final server update
[2025-10-13 14:32:25] 2025-10-13 18:31:18,525 | INFO     | total number of processed events: 400 (read)
[2025-10-13 14:32:25] 2025-10-13 18:31:18,526 | INFO     | executing command: lscpu
[2025-10-13 14:32:25] 2025-10-13 18:31:18,593 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 14:32:25] 2025-10-13 18:31:20,086 | WARNING  | process 260136 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 14:32:25] 2025-10-13 18:31:20,087 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6832199199/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 14:32:25] 2025-10-13 18:31:20,481 | INFO     | PID=251776 has CPU usage=12.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 14:32:25] 2025-10-13 18:31:20,481 | INFO     | .. there are 20 such processes running
[2025-10-13 14:32:25] 2025-10-13 18:31:20,707 | INFO     | number of running child processes to parent process 260136: 1
[2025-10-13 14:32:25] 2025-10-13 18:31:20,708 | INFO     | maximum number of monitored processes: 6
[2025-10-13 14:32:25] 2025-10-13 18:31:21,482 | INFO     | time since job start (5171s) is within the limit (172800.0s)
[2025-10-13 14:32:25] 2025-10-13 18:31:23,210 | INFO     | monitor loop #374: job 0:6832199199 is in state 'finished'
[2025-10-13 14:32:25] 2025-10-13 18:31:23,211 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:32:25] 2025-10-13 18:31:23,487 | INFO     | time since job start (5173s) is within the limit (172800.0s)
[2025-10-13 14:32:25] 2025-10-13 18:31:23,533 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 14:32:25] 2025-10-13 18:31:23,536 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2707.078571428571
[2025-10-13 14:32:25] 2025-10-13 18:31:23,545 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6832199199/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 14:32:25] 2025-10-13 18:31:23,546 | INFO     | extracted standard info from prmon json
[2025-10-13 14:32:25] 2025-10-13 18:31:23,546 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 14:32:25] 2025-10-13 18:31:23,546 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 14:32:25] 2025-10-13 18:31:23,547 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 14:32:25] 2025-10-13 18:31:23,547 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 14:32:25] 2025-10-13 18:31:23,549 | INFO     | fitting pss+swap vs Time
[2025-10-13 14:32:25] 2025-10-13 18:31:23,549 | INFO     | sum of square deviations: 147126479.5
[2025-10-13 14:32:25] 2025-10-13 18:31:23,549 | INFO     | sum of deviations: -2671239105.000001
[2025-10-13 14:32:25] 2025-10-13 18:31:23,550 | INFO     | mean x: 1760377792.5
[2025-10-13 14:32:25] 2025-10-13 18:31:23,550 | INFO     | mean y: 2221705.1025641025
[2025-10-13 14:32:25] 2025-10-13 18:31:23,550 | INFO     | -- intersect: 31963769448.787804
[2025-10-13 14:32:25] 2025-10-13 18:31:23,550 | INFO     | intersect: 31963769448.787804
[2025-10-13 14:32:25] 2025-10-13 18:31:23,550 | INFO     | chi2: 0.13437721664730104
[2025-10-13 14:32:25] 2025-10-13 18:31:23,550 | INFO     | -- intersect: 31963769448.787804
[2025-10-13 14:32:25] 2025-10-13 18:31:23,550 | INFO     | current memory leak: -18.16 B/s (using 78 data points, chi2=0.13)
[2025-10-13 14:32:25] 2025-10-13 18:31:23,551 | INFO     | could have reported an average CPU frequency of 2687 MHz (6 samples)
[2025-10-13 14:32:25] 2025-10-13 18:31:23,551 | INFO     | ..............................
[2025-10-13 14:32:25] 2025-10-13 18:31:23,551 | INFO     | . Timing measurements:
[2025-10-13 14:32:25] 2025-10-13 18:31:23,551 | INFO     | . get job = 0 s
[2025-10-13 14:32:25] 2025-10-13 18:31:23,551 | INFO     | . initial setup = 2 s
[2025-10-13 14:32:25] 2025-10-13 18:31:23,551 | INFO     | . payload setup = 7 s
[2025-10-13 14:32:25] 2025-10-13 18:31:23,551 | INFO     | . stage-in = 0 s
[2025-10-13 14:32:25] 2025-10-13 18:31:23,551 | INFO     | . payload execution = 5136 s
[2025-10-13 14:32:25] 2025-10-13 18:31:23,551 | INFO     | . stage-out = 0 s
[2025-10-13 14:32:25] 2025-10-13 18:31:23,551 | INFO     | . log creation = 0 s
[2025-10-13 14:32:25] 2025-10-13 18:31:23,551 | INFO     | ..............................
[2025-10-13 14:32:25] 2025-10-13 18:31:23,640 | INFO     | 
[2025-10-13 14:32:25] 2025-10-13 18:31:23,640 | INFO     | job summary report
[2025-10-13 14:32:25] 2025-10-13 18:31:23,640 | INFO     | --------------------------------------------------
[2025-10-13 14:32:25] 2025-10-13 18:31:23,640 | INFO     | PanDA job id: 6832199199
[2025-10-13 14:32:25] 2025-10-13 18:31:23,640 | INFO     | task id: 46376905
[2025-10-13 14:32:25] 2025-10-13 18:31:23,640 | INFO     | errors: (none)
[2025-10-13 14:32:25] 2025-10-13 18:31:23,641 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 14:32:25] 2025-10-13 18:31:23,641 | INFO     | pilot state: finished 
[2025-10-13 14:32:25] 2025-10-13 18:31:23,641 | INFO     | transexitcode: 0
[2025-10-13 14:32:25] 2025-10-13 18:31:23,641 | INFO     | exeerrorcode: 0
[2025-10-13 14:32:25] 2025-10-13 18:31:23,641 | INFO     | exeerrordiag: 
[2025-10-13 14:32:25] 2025-10-13 18:31:23,641 | INFO     | exitcode: 0
[2025-10-13 14:32:25] 2025-10-13 18:31:23,641 | INFO     | exitmsg: OK
[2025-10-13 14:32:25] 2025-10-13 18:31:23,641 | INFO     | cpuconsumptiontime: 36331 s
[2025-10-13 14:32:25] 2025-10-13 18:31:23,641 | INFO     | nevents: 400
[2025-10-13 14:32:25] 2025-10-13 18:31:23,641 | INFO     | neventsw: 0
[2025-10-13 14:32:25] 2025-10-13 18:31:23,641 | INFO     | pid: 260136
[2025-10-13 14:32:25] 2025-10-13 18:31:23,641 | INFO     | pgrp: 260136
[2025-10-13 14:32:25] 2025-10-13 18:31:23,642 | INFO     | corecount: 8
[2025-10-13 14:32:25] 2025-10-13 18:31:23,642 | INFO     | event service: False
[2025-10-13 14:32:25] 2025-10-13 18:31:23,642 | INFO     | sizes: {0: 2347988, 1: 2348844, 6: 2349106, 12: 2349134, 5147: 2375399, 5148: 2384397, 5149: 2384581, 5157: 2384775}
[2025-10-13 14:32:25] 2025-10-13 18:31:23,642 | INFO     | --------------------------------------------------
[2025-10-13 14:32:25] 2025-10-13 18:31:23,642 | INFO     | 
[2025-10-13 14:32:25] 2025-10-13 18:31:23,642 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 14:32:25] 2025-10-13 18:31:23,663 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 14:32:25] 2025-10-13 18:31:23,664 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 14:32:25] 2025-10-13 18:31:23,664 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 14:32:25] 2025-10-13 18:31:23,664 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 14:32:25] 2025-10-13 18:31:23,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 14:32:25] 2025-10-13 18:31:23,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 14:32:25] 2025-10-13 18:31:23,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 14:32:25] 2025-10-13 18:31:23,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 14:32:25] 2025-10-13 18:31:23,665 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 14:32:25] 2025-10-13 18:31:23,665 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 14:32:25] 2025-10-13 18:31:23,665 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 14:32:25] 2025-10-13 18:31:23,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 14:32:25] 2025-10-13 18:31:23,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 14:32:25] 2025-10-13 18:31:23,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 14:32:25] 2025-10-13 18:31:23,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 14:32:25] 2025-10-13 18:31:23,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 14:32:25] 2025-10-13 18:31:23,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 14:32:25] 2025-10-13 18:31:23,665 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 14:32:25] 2025-10-13 18:31:23,666 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 14:32:25] 2025-10-13 18:31:23,666 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 14:32:25] 2025-10-13 18:31:23,666 | INFO     | job 6832199199 has completed (purged errors)
[2025-10-13 14:32:25] 2025-10-13 18:31:23,666 | INFO     | overall cleanup function is called
[2025-10-13 14:32:25] 2025-10-13 18:31:24,673 | INFO     | --- collectZombieJob: --- 10, [260136]
[2025-10-13 14:32:25] 2025-10-13 18:31:24,674 | INFO     | zombie collector waiting for pid 260136
[2025-10-13 14:32:25] 2025-10-13 18:31:24,674 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 14:32:25] 2025-10-13 18:31:24,674 | INFO     | collected zombie processes
[2025-10-13 14:32:25] 2025-10-13 18:31:24,674 | INFO     | will attempt to kill all subprocesses of pid=260136
[2025-10-13 14:32:25] 2025-10-13 18:31:24,935 | INFO     | process IDs to be killed: [260136] (in reverse order)
[2025-10-13 14:32:25] 2025-10-13 18:31:25,033 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 14:32:25] 2025-10-13 18:31:25,034 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 14:32:25] 2025-10-13 18:31:25,049 | INFO     | did not find any defunct processes belonging to 260136
[2025-10-13 14:32:25] 2025-10-13 18:31:25,064 | INFO     | did not find any defunct processes belonging to 260136
[2025-10-13 14:32:25] 2025-10-13 18:31:25,064 | INFO     | ready for new job
[2025-10-13 14:32:25] 2025-10-13 18:31:25,064 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 14:32:25] 2025-10-13 18:31:25,067 | INFO     | ***************************************
[2025-10-13 14:32:25] 2025-10-13 18:31:25,068 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 14:32:25] 2025-10-13 18:31:25,068 | INFO     | ***************************************
[2025-10-13 14:32:25] 2025-10-13 18:31:25,069 | INFO     | 
[2025-10-13 14:32:25] 2025-10-13 18:31:25,084 | INFO     | architecture information:
[2025-10-13 14:32:25] 2025-10-13 18:31:25,085 | INFO     | executing command: cat /etc/os-release
[2025-10-13 14:32:25] 2025-10-13 18:31:25,100 | INFO     | cat /etc/os-release:
[2025-10-13 14:32:25] NAME="CentOS Linux"
[2025-10-13 14:32:25] VERSION="7 (Core)"
[2025-10-13 14:32:25] ID="centos"
[2025-10-13 14:32:25] ID_LIKE="rhel fedora"
[2025-10-13 14:32:25] VERSION_ID="7"
[2025-10-13 14:32:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 14:32:25] ANSI_COLOR="0;31"
[2025-10-13 14:32:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 14:32:25] HOME_URL="https://www.centos.org/"
[2025-10-13 14:32:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 14:32:25] 
[2025-10-13 14:32:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 14:32:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 14:32:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 14:32:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 14:32:25] 
[2025-10-13 14:32:25] 2025-10-13 18:31:25,100 | INFO     | ***************************************
[2025-10-13 14:32:25] 2025-10-13 18:31:25,603 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 14:32:25] 2025-10-13 18:31:25,622 | INFO     | sufficient remaining disk space (76560728064 B)
[2025-10-13 14:32:25] 2025-10-13 18:31:25,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 14:32:25] 2025-10-13 18:31:25,623 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 14:32:25] 2025-10-13 18:31:25,623 | INFO     | update_server=False
[2025-10-13 14:32:25] 2025-10-13 18:31:25,623 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 14:32:25] 2025-10-13 18:31:25,623 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:32:25] 2025-10-13 18:31:25,623 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 14:32:25] 2025-10-13 18:31:25,714 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 14:32:25] 2025-10-13 18:31:25,714 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 14:32:25] 2025-10-13 18:31:25,714 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:32:25] 2025-10-13 18:31:25,714 | INFO     | will abort loop
[2025-10-13 14:32:25] 2025-10-13 18:31:26,196 | INFO     | all data control threads have been joined
[2025-10-13 14:32:25] 2025-10-13 18:31:26,278 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 14:32:25] 2025-10-13 18:31:26,289 | INFO     | all payload control threads have been joined
[2025-10-13 14:32:25] 2025-10-13 18:31:26,628 | INFO     | [job] retrieve thread has finished
[2025-10-13 14:32:25] 2025-10-13 18:31:26,629 | INFO     | [job] queue monitor thread has finished
[2025-10-13 14:32:25] 2025-10-13 18:31:26,718 | INFO     | [job] job monitor thread has finished
[2025-10-13 14:32:25] 2025-10-13 18:31:26,797 | INFO     | all job control threads have been joined
[2025-10-13 14:32:25] 2025-10-13 18:31:27,201 | INFO     | [data] control thread has finished
[2025-10-13 14:32:25] 2025-10-13 18:31:27,295 | INFO     | [payload] control thread has finished
[2025-10-13 14:32:25] 2025-10-13 18:31:27,341 | INFO     | [payload] validate_post thread has finished
[2025-10-13 14:32:25] 2025-10-13 18:31:27,553 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 14:32:25] 2025-10-13 18:31:27,630 | INFO     | [job] validate thread has finished
[2025-10-13 14:32:25] 2025-10-13 18:31:27,631 | INFO     | [data] copytool_out thread has finished
[2025-10-13 14:32:25] 2025-10-13 18:31:27,634 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 14:32:25] 2025-10-13 18:31:27,802 | INFO     | [job] control thread has finished
[2025-10-13 14:32:25] 2025-10-13 18:31:27,831 | INFO     | [data] copytool_in thread has finished
[2025-10-13 14:32:25] 2025-10-13 18:31:27,947 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 14:32:25] 2025-10-13 18:31:28,148 | INFO     | [payload] failed_post thread has finished
[2025-10-13 14:32:25] 2025-10-13 18:31:30,285 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 14:32:25] 2025-10-13 18:31:35,983 | INFO     | job.realtimelogging is not enabled
[2025-10-13 14:32:25] 2025-10-13 18:31:36,988 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 14:32:25] 2025-10-13 18:31:57,092 | INFO     | PID=251776 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 14:32:25] 2025-10-13 18:31:57,092 | INFO     | .. there are 20 such processes running
[2025-10-13 14:32:25] 2025-10-13 18:31:57,093 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 14:32:25] 2025-10-13 18:31:57,094 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 14:32:25] 2025-10-13 18:31:57,094 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 14:32:25] 2025-10-13 18:32:18,374 | INFO     | [monitor] cgroup control has ended
[2025-10-13 14:32:25] 2025-10-13 18:32:19,746 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140002635667264)>', '<ExcThread(monitor, started 140002142959360)>']
[2025-10-13 14:32:25] 2025-10-13 18:32:20,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 14:32:25] 2025-10-13 18:32:20,212 | INFO     | [monitor] control thread has ended
[2025-10-13 14:32:25] 2025-10-13 18:32:24,772 | INFO     | all workflow threads have been joined
[2025-10-13 14:32:25] 2025-10-13 18:32:24,773 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 14:32:25] 2025-10-13 18:32:24,773 | INFO     | traces error code: 0
[2025-10-13 14:32:25] 2025-10-13 18:32:24,774 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 14:32:25] 2025-10-13 18:32:25,075 [wrapper] ==== pilot stdout END ====
[2025-10-13 14:32:25] 2025-10-13 18:32:25,079 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 14:32:25] 2025-10-13 18:32:25,084 [wrapper] pilotpid: 251776
[2025-10-13 14:32:25] 2025-10-13 18:32:25,088 [wrapper] Pilot exit status: 0
[2025-10-13 14:32:25] 2025-10-13 18:32:25,102 [wrapper] pandaids: 6832199199
[2025-10-13 14:32:25] 2025-10-13 18:32:25,183 [wrapper] cleanup supervisor_pilot  493410 251777
[2025-10-13 14:32:25] 2025-10-13 18:32:25,186 [wrapper] Test setup, not cleaning
[2025-10-13 14:32:25] 2025-10-13 18:32:25,189 [wrapper] apfmon messages muted
[2025-10-13 14:32:25] 2025-10-13 18:32:25,193 [wrapper] ==== wrapper stdout END ====
[2025-10-13 14:32:25] 2025-10-13 18:32:25,196 [wrapper] ==== wrapper stderr END ====
[2025-10-13 14:32:25]  *** Error codes and diagnostics ***
[2025-10-13 14:32:25]     "exeErrorCode": 0,
[2025-10-13 14:32:25]     "exeErrorDiag": "",
[2025-10-13 14:32:25]     "pilotErrorCode": 0,
[2025-10-13 14:32:25]     "pilotErrorDiag": "",
[2025-10-13 14:32:25]  *** Listing of results directory ***
[2025-10-13 14:32:25] total 387128
[2025-10-13 14:32:25] -rw-r--r--. 1 boincer umatlas    552446 Oct  5 20:25 pilot3.tar.gz
[2025-10-13 14:32:25] -rwx------. 1 boincer umatlas     36292 Oct  5 20:41 runpilot2-wrapper.sh
[2025-10-13 14:32:25] -rw-r--r--. 1 boincer umatlas      5112 Oct  5 20:41 queuedata.json
[2025-10-13 14:32:25] -rw-r--r--. 1 boincer umatlas       100 Oct 13 13:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 14:32:25] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 13:04 run_atlas
[2025-10-13 14:32:25] -rw-r--r--. 1 boincer umatlas       105 Oct 13 13:04 job.xml
[2025-10-13 14:32:25] -rw-r--r--. 2 boincer umatlas 214178911 Oct 13 13:04 EVNT.46376901._003732.pool.root.1
[2025-10-13 14:32:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 13:04 start_atlas.sh
[2025-10-13 14:32:25] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 13:04 shared
[2025-10-13 14:32:25] -rw-r--r--. 2 boincer umatlas    565598 Oct 13 13:04 input.tar.gz
[2025-10-13 14:32:25] -rw-r--r--. 1 boincer umatlas         0 Oct 13 13:04 boinc_lockfile
[2025-10-13 14:32:25] -rw-r--r--. 1 boincer umatlas      2519 Oct 13 13:04 pandaJob.out
[2025-10-13 14:32:25] -rw-------. 1 boincer umatlas    972783 Oct 13 13:05 agis_schedconf.cvmfs.json
[2025-10-13 14:32:25] -rw-------. 1 boincer umatlas   1560580 Oct 13 13:05 agis_ddmendpoints.agis.ALL.json
[2025-10-13 14:32:25] drwx------. 4 boincer umatlas      4096 Oct 13 13:05 pilot3
[2025-10-13 14:32:25] -rw-------. 1 boincer umatlas 176200963 Oct 13 14:30 HITS.46376905._100987.pool.root.1
[2025-10-13 14:32:25] -rw-r--r--. 1 boincer umatlas       529 Oct 13 14:30 boinc_task_state.xml
[2025-10-13 14:32:25] -rw-------. 1 boincer umatlas        95 Oct 13 14:31 pilot_heartbeat.json
[2025-10-13 14:32:25] -rw-r--r--. 1 boincer umatlas      6840 Oct 13 14:31 init_data.xml
[2025-10-13 14:32:25] -rw-------. 1 boincer umatlas      1041 Oct 13 14:31 memory_monitor_summary.json
[2025-10-13 14:32:25] -rw-------. 1 boincer umatlas    326600 Oct 13 14:31 log.46376905._100987.job.log.tgz.1
[2025-10-13 14:32:25] -rw-------. 1 boincer umatlas      7822 Oct 13 14:31 heartbeat.json
[2025-10-13 14:32:25] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 14:32 boinc_mmap_file
[2025-10-13 14:32:25] -rw-r--r--. 1 boincer umatlas        27 Oct 13 14:32 wrapper_checkpoint.txt
[2025-10-13 14:32:25] -rw-------. 1 boincer umatlas      5081 Oct 13 14:32 pilotlog.txt
[2025-10-13 14:32:25] -rw-------. 1 boincer umatlas    747870 Oct 13 14:32 log.46376905._100987.job.log.1
[2025-10-13 14:32:25] -rw-------. 1 boincer umatlas       357 Oct 13 14:32 output.list
[2025-10-13 14:32:25] -rw-r--r--. 1 boincer umatlas       620 Oct 13 14:32 runtime_log
[2025-10-13 14:32:25] -rw-------. 1 boincer umatlas   1095680 Oct 13 14:32 result.tar.gz
[2025-10-13 14:32:25] -rw-r--r--. 1 boincer umatlas      8708 Oct 13 14:32 runtime_log.err
[2025-10-13 14:32:25] -rw-------. 1 boincer umatlas       654 Oct 13 14:32 PaFLDmZToP8n9Rq4apOajLDm4fhM0noT9bVof3QYDm80HMDmvdVFRm.diag
[2025-10-13 14:32:25] -rw-r--r--. 1 boincer umatlas     22334 Oct 13 14:32 stderr.txt
[2025-10-13 14:32:25] HITS file was successfully produced:
[2025-10-13 14:32:25] -rw-------. 1 boincer umatlas 176200963 Oct 13 14:30 shared/HITS.pool.root.1
[2025-10-13 14:32:25]  *** Contents of shared directory: ***
[2025-10-13 14:32:25] total 382884
[2025-10-13 14:32:25] -rw-r--r--. 2 boincer umatlas 214178911 Oct 13 13:04 ATLAS.root_0
[2025-10-13 14:32:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 13:04 start_atlas.sh
[2025-10-13 14:32:25] -rw-r--r--. 2 boincer umatlas    565598 Oct 13 13:04 input.tar.gz
[2025-10-13 14:32:25] -rw-------. 1 boincer umatlas 176200963 Oct 13 14:30 HITS.pool.root.1
[2025-10-13 14:32:25] -rw-------. 1 boincer umatlas   1095680 Oct 13 14:32 result.tar.gz
14:32:26 (247904): run_atlas exited; CPU time 36442.214912
14:32:26 (247904): called boinc_finish(0)

</stderr_txt>
]]>

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