Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:52:58 (17107): wrapper (7.7.26015): starting
12:52:58 (17107): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 12:52:58] Arguments: --nthreads 8
[2025-10-13 12:52:58] Threads: 8
[2025-10-13 12:52:58] Checking for CVMFS
[2025-10-13 12:52:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 12:52:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 12:52:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 12:52:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 12:52:58] 2.11.2.0 2908 106765 93904 151667 0 1 15577598 20275200 1 130560 2 52301334 99.988 3397271 19835 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 12:52:58] CVMFS is ok
[2025-10-13 12:52:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 12:52:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 12:52:58] Further information can be found at the LHC@home message board.
[2025-10-13 12:52:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 12:52:58] Checking for apptainer binary...
[2025-10-13 12:52:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 12:52:58] Running /usr/bin/apptainer --version
[2025-10-13 12:52:58] apptainer version 1.3.2-1.el7
[2025-10-13 12:52:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 12:53:00] c-115-5.aglt2.org
[2025-10-13 12:53:00] apptainer works
[2025-10-13 12:53:00] Set ATHENA_PROC_NUMBER=8
[2025-10-13 12:53:00] Set ATHENA_CORE_NUMBER=8
[2025-10-13 12:53:00] Starting ATLAS job with PandaID=6838634818
[2025-10-13 12:53:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 14:43:35]  *** The last 200 lines of the pilot log: ***
[2025-10-13 14:43:35] 2025-10-13 18:42:39,304 | INFO     | monitor loop #490: job 0:6838634818 is in state 'finished'
[2025-10-13 14:43:35] 2025-10-13 18:42:39,304 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:43:35] 2025-10-13 18:42:40,444 | INFO     | time since job start (6561s) is within the limit (172800.0s)
[2025-10-13 14:43:35] 2025-10-13 18:42:41,430 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 14:43:35] 2025-10-13 18:42:41,433 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.625
[2025-10-13 14:43:35] 2025-10-13 18:42:41,434 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838634818/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 14:43:35] 2025-10-13 18:42:41,435 | INFO     | extracted standard info from prmon json
[2025-10-13 14:43:35] 2025-10-13 18:42:41,435 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 14:43:35] 2025-10-13 18:42:41,435 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 14:43:35] 2025-10-13 18:42:41,436 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 14:43:35] 2025-10-13 18:42:41,436 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 14:43:35] 2025-10-13 18:42:41,438 | INFO     | fitting pss+swap vs Time
[2025-10-13 14:43:35] 2025-10-13 18:42:41,438 | INFO     | sum of square deviations: 379832238.0
[2025-10-13 14:43:35] 2025-10-13 18:42:41,439 | INFO     | sum of deviations: 5397839309.000003
[2025-10-13 14:43:35] 2025-10-13 18:42:41,439 | INFO     | mean x: 1760377663.0
[2025-10-13 14:43:35] 2025-10-13 18:42:41,439 | INFO     | mean y: 2520115.971962617
[2025-10-13 14:43:35] 2025-10-13 18:42:41,439 | INFO     | -- intersect: -25014407878.5048
[2025-10-13 14:43:35] 2025-10-13 18:42:41,439 | INFO     | intersect: -25014407878.5048
[2025-10-13 14:43:35] 2025-10-13 18:42:41,439 | INFO     | chi2: 1.5125903317628178
[2025-10-13 14:43:35] 2025-10-13 18:42:41,440 | INFO     | sum of square deviations: 329031285.5
[2025-10-13 14:43:35] 2025-10-13 18:42:41,440 | INFO     | sum of deviations: 5250967321.500004
[2025-10-13 14:43:35] 2025-10-13 18:42:41,440 | INFO     | mean x: 1760377510.5
[2025-10-13 14:43:35] 2025-10-13 18:42:41,440 | INFO     | mean y: 2519674.6764705884
[2025-10-13 14:43:35] 2025-10-13 18:42:41,440 | INFO     | -- intersect: -28091115151.240498
[2025-10-13 14:43:35] 2025-10-13 18:42:41,441 | INFO     | intersect: -28091115151.240498
[2025-10-13 14:43:35] 2025-10-13 18:42:41,441 | INFO     | chi2: 1.5154320154233434
[2025-10-13 14:43:35] 2025-10-13 18:42:41,441 | INFO     | current chi2=1.5154320154233434 (change=-0.18786869126776945 %)
[2025-10-13 14:43:35] 2025-10-13 18:42:41,441 | INFO     | right removable region: 101
[2025-10-13 14:43:35] 2025-10-13 18:42:41,441 | INFO     | sum of square deviations: 329031285.5
[2025-10-13 14:43:35] 2025-10-13 18:42:41,442 | INFO     | sum of deviations: -9891695583.999998
[2025-10-13 14:43:35] 2025-10-13 18:42:41,442 | INFO     | mean x: 1760377815.5
[2025-10-13 14:43:35] 2025-10-13 18:42:41,442 | INFO     | mean y: 2564974.470588235
[2025-10-13 14:43:35] 2025-10-13 18:42:41,442 | INFO     | -- intersect: 52924953303.8713
[2025-10-13 14:43:35] 2025-10-13 18:42:41,442 | INFO     | intersect: 52924953303.8713
[2025-10-13 14:43:35] 2025-10-13 18:42:41,442 | INFO     | chi2: 0.09518612278663262
[2025-10-13 14:43:35] 2025-10-13 18:42:41,443 | INFO     | current chi2=0.09518612278663262 (change=93.70707846084802 %)
[2025-10-13 14:43:35] 2025-10-13 18:42:41,443 | INFO     | sum of square deviations: 282974608.0
[2025-10-13 14:43:35] 2025-10-13 18:42:41,443 | INFO     | sum of deviations: -8204998065.0
[2025-10-13 14:43:35] 2025-10-13 18:42:41,443 | INFO     | mean x: 1760377968.0
[2025-10-13 14:43:35] 2025-10-13 18:42:41,443 | INFO     | mean y: 2559249.9896907215
[2025-10-13 14:43:35] 2025-10-13 18:42:41,443 | INFO     | -- intersect: 51045647261.295044
[2025-10-13 14:43:35] 2025-10-13 18:42:41,444 | INFO     | intersect: 51045647261.295044
[2025-10-13 14:43:35] 2025-10-13 18:42:41,444 | INFO     | chi2: 0.08456448067284962
[2025-10-13 14:43:35] 2025-10-13 18:42:41,444 | INFO     | current chi2=0.08456448067284962 (change=11.158813703960046 %)
[2025-10-13 14:43:35] 2025-10-13 18:42:41,444 | INFO     | left removable region: 20
[2025-10-13 14:43:35] 2025-10-13 18:42:41,444 | INFO     | sum of square deviations: 164765880.0
[2025-10-13 14:43:35] 2025-10-13 18:42:41,445 | INFO     | sum of deviations: -1385911094.0
[2025-10-13 14:43:35] 2025-10-13 18:42:41,445 | INFO     | mean x: 1760378090.0
[2025-10-13 14:43:35] 2025-10-13 18:42:41,445 | INFO     | mean y: 2533199.0
[2025-10-13 14:43:35] 2025-10-13 18:42:41,445 | INFO     | -- intersect: 14809770744.573942
[2025-10-13 14:43:35] 2025-10-13 18:42:41,445 | INFO     | intersect: 14809770744.573942
[2025-10-13 14:43:35] 2025-10-13 18:42:41,445 | INFO     | chi2: 0.033245947784558014
[2025-10-13 14:43:35] 2025-10-13 18:42:41,445 | INFO     | -- intersect: 14809770744.573942
[2025-10-13 14:43:35] 2025-10-13 18:42:41,446 | INFO     | current memory leak: -8.41 B/s (using 81 data points, chi2=0.03)
[2025-10-13 14:43:35] 2025-10-13 18:42:41,446 | INFO     | could have reported an average CPU frequency of 2114 MHz (7 samples)
[2025-10-13 14:43:35] 2025-10-13 18:42:41,446 | INFO     | ..............................
[2025-10-13 14:43:35] 2025-10-13 18:42:41,446 | INFO     | . Timing measurements:
[2025-10-13 14:43:35] 2025-10-13 18:42:41,446 | INFO     | . get job = 0 s
[2025-10-13 14:43:35] 2025-10-13 18:42:41,447 | INFO     | . initial setup = 3 s
[2025-10-13 14:43:35] 2025-10-13 18:42:41,447 | INFO     | . payload setup = 8 s
[2025-10-13 14:43:35] 2025-10-13 18:42:41,447 | INFO     | . stage-in = 0 s
[2025-10-13 14:43:35] 2025-10-13 18:42:41,447 | INFO     | . payload execution = 6522 s
[2025-10-13 14:43:35] 2025-10-13 18:42:41,447 | INFO     | . stage-out = 0 s
[2025-10-13 14:43:35] 2025-10-13 18:42:41,447 | INFO     | . log creation = 0 s
[2025-10-13 14:43:35] 2025-10-13 18:42:41,447 | INFO     | ..............................
[2025-10-13 14:43:35] 2025-10-13 18:42:41,530 | INFO     | 
[2025-10-13 14:43:35] 2025-10-13 18:42:41,531 | INFO     | job summary report
[2025-10-13 14:43:35] 2025-10-13 18:42:41,531 | INFO     | --------------------------------------------------
[2025-10-13 14:43:35] 2025-10-13 18:42:41,531 | INFO     | PanDA job id: 6838634818
[2025-10-13 14:43:35] 2025-10-13 18:42:41,531 | INFO     | task id: 46676269
[2025-10-13 14:43:35] 2025-10-13 18:42:41,531 | INFO     | errors: (none)
[2025-10-13 14:43:35] 2025-10-13 18:42:41,532 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 14:43:35] 2025-10-13 18:42:41,532 | INFO     | pilot state: finished 
[2025-10-13 14:43:35] 2025-10-13 18:42:41,532 | INFO     | transexitcode: 0
[2025-10-13 14:43:35] 2025-10-13 18:42:41,532 | INFO     | exeerrorcode: 0
[2025-10-13 14:43:35] 2025-10-13 18:42:41,532 | INFO     | exeerrordiag: 
[2025-10-13 14:43:35] 2025-10-13 18:42:41,532 | INFO     | exitcode: 0
[2025-10-13 14:43:35] 2025-10-13 18:42:41,533 | INFO     | exitmsg: OK
[2025-10-13 14:43:35] 2025-10-13 18:42:41,533 | INFO     | cpuconsumptiontime: 48329 s
[2025-10-13 14:43:35] 2025-10-13 18:42:41,533 | INFO     | nevents: 400
[2025-10-13 14:43:35] 2025-10-13 18:42:41,533 | INFO     | neventsw: 0
[2025-10-13 14:43:35] 2025-10-13 18:42:41,533 | INFO     | pid: 27282
[2025-10-13 14:43:35] 2025-10-13 18:42:41,533 | INFO     | pgrp: 27282
[2025-10-13 14:43:35] 2025-10-13 18:42:41,534 | INFO     | corecount: 8
[2025-10-13 14:43:35] 2025-10-13 18:42:41,534 | INFO     | event service: False
[2025-10-13 14:43:35] 2025-10-13 18:42:41,534 | INFO     | sizes: {0: 2348685, 1: 2348884, 7: 2349146, 12: 2349174, 6535: 2376177, 6536: 2385175, 6539: 2385359, 6546: 2385553}
[2025-10-13 14:43:35] 2025-10-13 18:42:41,534 | INFO     | --------------------------------------------------
[2025-10-13 14:43:35] 2025-10-13 18:42:41,534 | INFO     | 
[2025-10-13 14:43:35] 2025-10-13 18:42:41,535 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 14:43:35] 2025-10-13 18:42:41,566 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 14:43:35] 2025-10-13 18:42:41,566 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 14:43:35] 2025-10-13 18:42:41,567 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 14:43:35] 2025-10-13 18:42:41,567 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 14:43:35] 2025-10-13 18:42:41,567 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 14:43:35] 2025-10-13 18:42:41,567 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 14:43:35] 2025-10-13 18:42:41,567 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 14:43:35] 2025-10-13 18:42:41,567 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 14:43:35] 2025-10-13 18:42:41,568 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 14:43:35] 2025-10-13 18:42:41,568 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 14:43:35] 2025-10-13 18:42:41,568 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 14:43:35] 2025-10-13 18:42:41,568 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 14:43:35] 2025-10-13 18:42:41,568 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 14:43:35] 2025-10-13 18:42:41,569 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 14:43:35] 2025-10-13 18:42:41,569 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 14:43:35] 2025-10-13 18:42:41,569 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 14:43:35] 2025-10-13 18:42:41,569 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 14:43:35] 2025-10-13 18:42:41,569 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 14:43:35] 2025-10-13 18:42:41,570 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 14:43:35] 2025-10-13 18:42:41,570 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 14:43:35] 2025-10-13 18:42:41,570 | INFO     | job 6838634818 has completed (purged errors)
[2025-10-13 14:43:35] 2025-10-13 18:42:41,570 | INFO     | overall cleanup function is called
[2025-10-13 14:43:35] 2025-10-13 18:42:42,578 | INFO     | --- collectZombieJob: --- 10, [27282]
[2025-10-13 14:43:35] 2025-10-13 18:42:42,578 | INFO     | zombie collector waiting for pid 27282
[2025-10-13 14:43:35] 2025-10-13 18:42:42,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 14:43:35] 2025-10-13 18:42:42,579 | INFO     | collected zombie processes
[2025-10-13 14:43:35] 2025-10-13 18:42:42,579 | INFO     | will attempt to kill all subprocesses of pid=27282
[2025-10-13 14:43:35] 2025-10-13 18:42:42,661 | INFO     | process IDs to be killed: [27282] (in reverse order)
[2025-10-13 14:43:35] 2025-10-13 18:42:42,718 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 14:43:35] 2025-10-13 18:42:42,719 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 14:43:35] 2025-10-13 18:42:42,722 | INFO     | did not find any defunct processes belonging to 27282
[2025-10-13 14:43:35] 2025-10-13 18:42:42,725 | INFO     | did not find any defunct processes belonging to 27282
[2025-10-13 14:43:35] 2025-10-13 18:42:42,725 | INFO     | ready for new job
[2025-10-13 14:43:35] 2025-10-13 18:42:42,725 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 14:43:35] 2025-10-13 18:42:42,727 | INFO     | ***************************************
[2025-10-13 14:43:35] 2025-10-13 18:42:42,727 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 14:43:35] 2025-10-13 18:42:42,727 | INFO     | ***************************************
[2025-10-13 14:43:35] 2025-10-13 18:42:42,727 | INFO     | 
[2025-10-13 14:43:35] 2025-10-13 18:42:42,727 | INFO     | architecture information:
[2025-10-13 14:43:35] 2025-10-13 18:42:42,728 | INFO     | executing command: cat /etc/os-release
[2025-10-13 14:43:35] 2025-10-13 18:42:42,747 | INFO     | cat /etc/os-release:
[2025-10-13 14:43:35] NAME="CentOS Linux"
[2025-10-13 14:43:35] VERSION="7 (Core)"
[2025-10-13 14:43:35] ID="centos"
[2025-10-13 14:43:35] ID_LIKE="rhel fedora"
[2025-10-13 14:43:35] VERSION_ID="7"
[2025-10-13 14:43:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 14:43:35] ANSI_COLOR="0;31"
[2025-10-13 14:43:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 14:43:35] HOME_URL="https://www.centos.org/"
[2025-10-13 14:43:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 14:43:35] 
[2025-10-13 14:43:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 14:43:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 14:43:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 14:43:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 14:43:35] 
[2025-10-13 14:43:35] 2025-10-13 18:42:42,748 | INFO     | ***************************************
[2025-10-13 14:43:35] 2025-10-13 18:42:43,251 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 14:43:35] 2025-10-13 18:42:43,272 | INFO     | sufficient remaining disk space (18587058176 B)
[2025-10-13 14:43:35] 2025-10-13 18:42:43,272 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 14:43:35] 2025-10-13 18:42:43,273 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 14:43:35] 2025-10-13 18:42:43,273 | INFO     | update_server=False
[2025-10-13 14:43:35] 2025-10-13 18:42:43,273 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 14:43:35] 2025-10-13 18:42:43,274 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:43:35] 2025-10-13 18:42:43,274 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:43:35] 2025-10-13 18:42:43,274 | INFO     | aborting loop
[2025-10-13 14:43:35] 2025-10-13 18:42:44,150 | INFO     | all data control threads have been joined
[2025-10-13 14:43:35] 2025-10-13 18:42:44,161 | INFO     | all job control threads have been joined
[2025-10-13 14:43:35] 2025-10-13 18:42:44,279 | INFO     | [job] retrieve thread has finished
[2025-10-13 14:43:35] 2025-10-13 18:42:44,280 | INFO     | [job] queue monitor thread has finished
[2025-10-13 14:43:35] 2025-10-13 18:42:44,281 | INFO     | [job] job monitor thread has finished
[2025-10-13 14:43:35] 2025-10-13 18:42:44,382 | INFO     | [payload] validate_post thread has finished
[2025-10-13 14:43:35] 2025-10-13 18:42:44,478 | INFO     | all payload control threads have been joined
[2025-10-13 14:43:35] 2025-10-13 18:42:44,490 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 14:43:35] 2025-10-13 18:42:44,554 | INFO     | [job] validate thread has finished
[2025-10-13 14:43:35] 2025-10-13 18:42:44,842 | INFO     | [payload] failed_post thread has finished
[2025-10-13 14:43:35] 2025-10-13 18:42:45,005 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 14:43:35] 2025-10-13 18:42:45,065 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 14:43:35] 2025-10-13 18:42:45,088 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 14:43:35] 2025-10-13 18:42:45,096 | INFO     | [data] copytool_in thread has finished
[2025-10-13 14:43:35] 2025-10-13 18:42:45,098 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 14:43:35] 2025-10-13 18:42:45,156 | INFO     | [data] control thread has finished
[2025-10-13 14:43:35] 2025-10-13 18:42:45,165 | INFO     | [job] control thread has finished
[2025-10-13 14:43:35] 2025-10-13 18:42:45,484 | INFO     | [payload] control thread has finished
[2025-10-13 14:43:35] 2025-10-13 18:42:46,496 | INFO     | [data] copytool_out thread has finished
[2025-10-13 14:43:35] 2025-10-13 18:42:49,071 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 14:43:35] 2025-10-13 18:42:53,729 | INFO     | job.realtimelogging is not enabled
[2025-10-13 14:43:35] 2025-10-13 18:42:54,734 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 14:43:35] 2025-10-13 18:43:13,649 | INFO     | PID=20918 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 14:43:35] 2025-10-13 18:43:13,650 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 14:43:35] 2025-10-13 18:43:13,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 14:43:35] 2025-10-13 18:43:13,650 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 14:43:35] 2025-10-13 18:43:29,376 | INFO     | [monitor] cgroup control has ended
[2025-10-13 14:43:35] 2025-10-13 18:43:29,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140645645592384)>', '<ExcThread(monitor, started 140645062661888)>']
[2025-10-13 14:43:35] 2025-10-13 18:43:30,733 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 14:43:35] 2025-10-13 18:43:30,733 | INFO     | [monitor] control thread has ended
[2025-10-13 14:43:35] 2025-10-13 18:43:34,830 | INFO     | all workflow threads have been joined
[2025-10-13 14:43:35] 2025-10-13 18:43:34,830 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 14:43:35] 2025-10-13 18:43:34,831 | INFO     | traces error code: 0
[2025-10-13 14:43:35] 2025-10-13 18:43:34,832 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 14:43:35] 2025-10-13 18:43:34,964 [wrapper] ==== pilot stdout END ====
[2025-10-13 14:43:35] 2025-10-13 18:43:34,969 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 14:43:35] 2025-10-13 18:43:34,973 [wrapper] pilotpid: 20918
[2025-10-13 14:43:35] 2025-10-13 18:43:34,978 [wrapper] Pilot exit status: 0
[2025-10-13 14:43:35] 2025-10-13 18:43:34,997 [wrapper] pandaids: 6838634818
[2025-10-13 14:43:35] 2025-10-13 18:43:35,054 [wrapper] cleanup supervisor_pilot  1458 20919
[2025-10-13 14:43:35] 2025-10-13 18:43:35,060 [wrapper] Test setup, not cleaning
[2025-10-13 14:43:35] 2025-10-13 18:43:35,065 [wrapper] apfmon messages muted
[2025-10-13 14:43:35] 2025-10-13 18:43:35,070 [wrapper] ==== wrapper stdout END ====
[2025-10-13 14:43:35] 2025-10-13 18:43:35,075 [wrapper] ==== wrapper stderr END ====
[2025-10-13 14:43:35]  *** Error codes and diagnostics ***
[2025-10-13 14:43:35]     "exeErrorCode": 0,
[2025-10-13 14:43:35]     "exeErrorDiag": "",
[2025-10-13 14:43:35]     "pilotErrorCode": 0,
[2025-10-13 14:43:35]     "pilotErrorDiag": "",
[2025-10-13 14:43:35]  *** Listing of results directory ***
[2025-10-13 14:43:35] total 414024
[2025-10-13 14:43:35] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 13:33 pilot3.tar.gz
[2025-10-13 14:43:35] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 13:37 queuedata.json
[2025-10-13 14:43:35] -rwx------ 1 boincer umatlas     36292 Oct 11 13:38 runpilot2-wrapper.sh
[2025-10-13 14:43:35] -rw-r--r-- 1 boincer umatlas       100 Oct 13 12:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 14:43:35] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 12:52 run_atlas
[2025-10-13 14:43:35] -rw-r--r-- 1 boincer umatlas       105 Oct 13 12:52 job.xml
[2025-10-13 14:43:35] -rw-r--r-- 2 boincer umatlas 221201731 Oct 13 12:52 EVNT.46676267._002495.pool.root.1
[2025-10-13 14:43:35] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 12:52 start_atlas.sh
[2025-10-13 14:43:35] drwxrwx--x 2 boincer umatlas      4096 Oct 13 12:52 shared
[2025-10-13 14:43:35] -rw-r--r-- 2 boincer umatlas    569680 Oct 13 12:52 input.tar.gz
[2025-10-13 14:43:35] -rw-r--r-- 1 boincer umatlas         0 Oct 13 12:52 boinc_lockfile
[2025-10-13 14:43:35] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 12:53 pandaJob.out
[2025-10-13 14:43:35] -rw------- 1 boincer umatlas    972783 Oct 13 12:53 agis_schedconf.cvmfs.json
[2025-10-13 14:43:35] -rw------- 1 boincer umatlas   1560580 Oct 13 12:53 agis_ddmendpoints.agis.ALL.json
[2025-10-13 14:43:35] drwx------ 5 boincer umatlas      4096 Oct 13 12:53 pilot3
[2025-10-13 14:43:35] -rw-r--r-- 1 boincer umatlas      5908 Oct 13 14:37 init_data.xml
[2025-10-13 14:43:35] -rw------- 1 boincer umatlas 196282727 Oct 13 14:41 HITS.46676269._062113.pool.root.1
[2025-10-13 14:43:35] -rw-r--r-- 1 boincer umatlas       529 Oct 13 14:42 boinc_task_state.xml
[2025-10-13 14:43:35] -rw------- 1 boincer umatlas      1048 Oct 13 14:42 memory_monitor_summary.json
[2025-10-13 14:43:35] -rw------- 1 boincer umatlas    358884 Oct 13 14:42 log.46676269._062113.job.log.tgz.1
[2025-10-13 14:43:35] -rw------- 1 boincer umatlas      7843 Oct 13 14:42 heartbeat.json
[2025-10-13 14:43:35] -rw------- 1 boincer umatlas        95 Oct 13 14:43 pilot_heartbeat.json
[2025-10-13 14:43:35] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 14:43 boinc_mmap_file
[2025-10-13 14:43:35] -rw-r--r-- 1 boincer umatlas        27 Oct 13 14:43 wrapper_checkpoint.txt
[2025-10-13 14:43:35] -rw------- 1 boincer umatlas      4818 Oct 13 14:43 pilotlog.txt
[2025-10-13 14:43:35] -rw------- 1 boincer umatlas    931891 Oct 13 14:43 log.46676269._062113.job.log.1
[2025-10-13 14:43:35] -rw------- 1 boincer umatlas       357 Oct 13 14:43 output.list
[2025-10-13 14:43:35] -rw-r--r-- 1 boincer umatlas       620 Oct 13 14:43 runtime_log
[2025-10-13 14:43:35] -rw------- 1 boincer umatlas   1310720 Oct 13 14:43 result.tar.gz
[2025-10-13 14:43:35] -rw-r--r-- 1 boincer umatlas      8698 Oct 13 14:43 runtime_log.err
[2025-10-13 14:43:35] -rw------- 1 boincer umatlas       659 Oct 13 14:43 dYMLDm2isR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmxKSMDm4WiHNm.diag
[2025-10-13 14:43:35] -rw-r--r-- 1 boincer umatlas     21071 Oct 13 14:43 stderr.txt
[2025-10-13 14:43:35] HITS file was successfully produced:
[2025-10-13 14:43:35] -rw------- 1 boincer umatlas 196282727 Oct 13 14:41 shared/HITS.pool.root.1
[2025-10-13 14:43:35]  *** Contents of shared directory: ***
[2025-10-13 14:43:35] total 409560
[2025-10-13 14:43:35] -rw-r--r-- 2 boincer umatlas 221201731 Oct 13 12:52 ATLAS.root_0
[2025-10-13 14:43:35] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 12:52 start_atlas.sh
[2025-10-13 14:43:35] -rw-r--r-- 2 boincer umatlas    569680 Oct 13 12:52 input.tar.gz
[2025-10-13 14:43:35] -rw------- 1 boincer umatlas 196282727 Oct 13 14:41 HITS.pool.root.1
[2025-10-13 14:43:35] -rw------- 1 boincer umatlas   1310720 Oct 13 14:43 result.tar.gz
14:43:36 (17107): run_atlas exited; CPU time 48330.286999
14:43:36 (17107): called boinc_finish(0)

</stderr_txt>
]]>

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