Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:49:11 (230484): wrapper (7.7.26015): starting
02:49:11 (230484): wrapper: running run_atlas (--nthreads 6)
[2025-10-14 02:49:11] Arguments: --nthreads 6
[2025-10-14 02:49:11] Threads: 6
[2025-10-14 02:49:11] Checking for CVMFS
[2025-10-14 02:49:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 02:49:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 02:49:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 02:49:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 02:49:12] 2.12.7.0 249871 7632 94912 151668 0 57 14093003 20971521 929 130560 0 12976679 99.996 262181 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2025-10-14 02:49:12] CVMFS is ok
[2025-10-14 02:49:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 02:49:12] Checking for apptainer binary...
[2025-10-14 02:49:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 02:49:12] Running /usr/bin/apptainer --version
[2025-10-14 02:49:12] apptainer version 1.4.0-1.el9
[2025-10-14 02:49:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 02:49:12] testio005
[2025-10-14 02:49:12] apptainer works
[2025-10-14 02:49:12] Set ATHENA_PROC_NUMBER=6
[2025-10-14 02:49:12] Set ATHENA_CORE_NUMBER=6
[2025-10-14 02:49:12] Starting ATLAS job with PandaID=6843137971
[2025-10-14 02:49:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 04:03:03]  *** The last 200 lines of the pilot log: ***
[2025-10-14 04:03:03] 2025-10-13 19:02:19,682 | INFO     | 4381s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-14 04:03:03] 2025-10-13 19:02:21,039 | INFO     | monitor loop #340: job 0:6843137971 is in state 'finished'
[2025-10-14 04:03:03] 2025-10-13 19:02:21,040 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 04:03:03] 2025-10-13 19:02:21,687 | INFO     | time since job start (4360s) is within the limit (172800.0s)
[2025-10-14 04:03:03] 2025-10-13 19:02:23,540 | INFO     | monitor loop #341: job 0:6843137971 is in state 'finished'
[2025-10-14 04:03:03] 2025-10-13 19:02:23,540 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 04:03:03] 2025-10-13 19:02:23,692 | INFO     | time since job start (4362s) is within the limit (172800.0s)
[2025-10-14 04:03:03] 2025-10-13 19:02:25,697 | INFO     | time since job start (4364s) is within the limit (172800.0s)
[2025-10-14 04:03:03] 2025-10-13 19:02:26,043 | INFO     | monitor loop #342: job 0:6843137971 is in state 'finished'
[2025-10-14 04:03:03] 2025-10-13 19:02:26,043 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 04:03:03] 2025-10-13 19:02:27,703 | INFO     | time since job start (4366s) is within the limit (172800.0s)
[2025-10-14 04:03:03] 2025-10-13 19:02:28,546 | INFO     | monitor loop #343: job 0:6843137971 is in state 'finished'
[2025-10-14 04:03:03] 2025-10-13 19:02:28,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 04:03:03] 2025-10-13 19:02:29,708 | INFO     | time since job start (4368s) is within the limit (172800.0s)
[2025-10-14 04:03:03] 2025-10-13 19:02:31,049 | INFO     | monitor loop #344: job 0:6843137971 is in state 'finished'
[2025-10-14 04:03:03] 2025-10-13 19:02:31,049 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 04:03:03] 2025-10-13 19:02:31,713 | INFO     | time since job start (4370s) is within the limit (172800.0s)
[2025-10-14 04:03:03] 2025-10-13 19:02:32,799 | INFO     | PID=234284 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-14 04:03:03] 2025-10-13 19:02:33,552 | INFO     | monitor loop #345: job 0:6843137971 is in state 'finished'
[2025-10-14 04:03:03] 2025-10-13 19:02:33,552 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 04:03:03] 2025-10-13 19:02:33,800 | INFO     | time since job start (4372s) is within the limit (172800.0s)
[2025-10-14 04:03:03] 2025-10-13 19:02:35,805 | INFO     | time since job start (4374s) is within the limit (172800.0s)
[2025-10-14 04:03:03] 2025-10-13 19:02:36,055 | INFO     | monitor loop #346: job 0:6843137971 is in state 'finished'
[2025-10-14 04:03:03] 2025-10-13 19:02:36,055 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 04:03:03] 2025-10-13 19:02:37,810 | INFO     | time since job start (4376s) is within the limit (172800.0s)
[2025-10-14 04:03:03] 2025-10-13 19:02:38,558 | INFO     | monitor loop #347: job 0:6843137971 is in state 'finished'
[2025-10-14 04:03:03] 2025-10-13 19:02:38,558 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 04:03:03] 2025-10-13 19:02:39,816 | INFO     | time since job start (4378s) is within the limit (172800.0s)
[2025-10-14 04:03:03] 2025-10-13 19:02:41,060 | INFO     | monitor loop #348: job 0:6843137971 is in state 'finished'
[2025-10-14 04:03:03] 2025-10-13 19:02:41,060 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 04:03:03] 2025-10-13 19:02:41,821 | INFO     | time since job start (4380s) is within the limit (172800.0s)
[2025-10-14 04:03:03] 2025-10-13 19:02:43,562 | INFO     | monitor loop #349: job 0:6843137971 is in state 'finished'
[2025-10-14 04:03:03] 2025-10-13 19:02:43,562 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 04:03:03] 2025-10-13 19:02:43,826 | INFO     | time since job start (4382s) is within the limit (172800.0s)
[2025-10-14 04:03:03] 2025-10-13 19:02:44,072 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 04:03:03] 2025-10-13 19:02:44,074 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3312.318125
[2025-10-14 04:03:03] 2025-10-13 19:02:44,076 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6843137971/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 04:03:03] 2025-10-13 19:02:44,077 | INFO     | extracted standard info from prmon json
[2025-10-14 04:03:03] 2025-10-13 19:02:44,077 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 04:03:03] 2025-10-13 19:02:44,077 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 04:03:03] 2025-10-13 19:02:44,077 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 04:03:03] 2025-10-13 19:02:44,077 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 04:03:03] 2025-10-13 19:02:44,078 | INFO     | fitting pss+swap vs Time
[2025-10-14 04:03:03] 2025-10-13 19:02:44,078 | INFO     | sum of square deviations: 81266640.0
[2025-10-14 04:03:03] 2025-10-13 19:02:44,078 | INFO     | sum of deviations: -6879170324.0
[2025-10-14 04:03:03] 2025-10-13 19:02:44,078 | INFO     | mean x: 1760380030.5
[2025-10-14 04:03:03] 2025-10-13 19:02:44,078 | INFO     | mean y: 2565569.65625
[2025-10-14 04:03:03] 2025-10-13 19:02:44,078 | INFO     | -- intersect: 149017635772.85175
[2025-10-14 04:03:03] 2025-10-13 19:02:44,078 | INFO     | intersect: 149017635772.85175
[2025-10-14 04:03:03] 2025-10-13 19:02:44,079 | INFO     | chi2: 0.12447990038072669
[2025-10-14 04:03:03] 2025-10-13 19:02:44,079 | INFO     | -- intersect: 149017635772.85175
[2025-10-14 04:03:03] 2025-10-13 19:02:44,079 | INFO     | current memory leak: -84.65 B/s (using 64 data points, chi2=0.12)
[2025-10-14 04:03:03] 2025-10-13 19:02:44,079 | INFO     | could have reported an average CPU frequency of 3321 MHz (6 samples)
[2025-10-14 04:03:03] 2025-10-13 19:02:44,079 | INFO     | ..............................
[2025-10-14 04:03:03] 2025-10-13 19:02:44,079 | INFO     | . Timing measurements:
[2025-10-14 04:03:03] 2025-10-13 19:02:44,079 | INFO     | . get job = 0 s
[2025-10-14 04:03:03] 2025-10-13 19:02:44,079 | INFO     | . initial setup = 22 s
[2025-10-14 04:03:03] 2025-10-13 19:02:44,079 | INFO     | . payload setup = 4 s
[2025-10-14 04:03:03] 2025-10-13 19:02:44,079 | INFO     | . stage-in = 0 s
[2025-10-14 04:03:03] 2025-10-13 19:02:44,079 | INFO     | . payload execution = 4283 s
[2025-10-14 04:03:03] 2025-10-13 19:02:44,079 | INFO     | . stage-out = 0 s
[2025-10-14 04:03:03] 2025-10-13 19:02:44,079 | INFO     | . log creation = 0 s
[2025-10-14 04:03:03] 2025-10-13 19:02:44,079 | INFO     | ..............................
[2025-10-14 04:03:03] 2025-10-13 19:02:44,138 | INFO     | 
[2025-10-14 04:03:03] 2025-10-13 19:02:44,138 | INFO     | job summary report
[2025-10-14 04:03:03] 2025-10-13 19:02:44,138 | INFO     | --------------------------------------------------
[2025-10-14 04:03:03] 2025-10-13 19:02:44,138 | INFO     | PanDA job id: 6843137971
[2025-10-14 04:03:03] 2025-10-13 19:02:44,139 | INFO     | task id: 46676269
[2025-10-14 04:03:03] 2025-10-13 19:02:44,139 | INFO     | errors: (none)
[2025-10-14 04:03:03] 2025-10-13 19:02:44,139 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 04:03:03] 2025-10-13 19:02:44,139 | INFO     | pilot state: finished 
[2025-10-14 04:03:03] 2025-10-13 19:02:44,139 | INFO     | transexitcode: 0
[2025-10-14 04:03:03] 2025-10-13 19:02:44,139 | INFO     | exeerrorcode: 0
[2025-10-14 04:03:03] 2025-10-13 19:02:44,139 | INFO     | exeerrordiag: 
[2025-10-14 04:03:03] 2025-10-13 19:02:44,139 | INFO     | exitcode: 0
[2025-10-14 04:03:03] 2025-10-13 19:02:44,139 | INFO     | exitmsg: OK
[2025-10-14 04:03:03] 2025-10-13 19:02:44,139 | INFO     | cpuconsumptiontime: 23260 s
[2025-10-14 04:03:03] 2025-10-13 19:02:44,139 | INFO     | nevents: 400
[2025-10-14 04:03:03] 2025-10-13 19:02:44,139 | INFO     | neventsw: 0
[2025-10-14 04:03:03] 2025-10-13 19:02:44,139 | INFO     | pid: 241052
[2025-10-14 04:03:03] 2025-10-13 19:02:44,139 | INFO     | pgrp: 241052
[2025-10-14 04:03:03] 2025-10-13 19:02:44,139 | INFO     | corecount: 6
[2025-10-14 04:03:03] 2025-10-13 19:02:44,139 | INFO     | event service: False
[2025-10-14 04:03:03] 2025-10-13 19:02:44,139 | INFO     | sizes: {0: 2348756, 5: 2349018, 11: 2349074, 4292: 2384058, 4369: 2384196}
[2025-10-14 04:03:03] 2025-10-13 19:02:44,139 | INFO     | --------------------------------------------------
[2025-10-14 04:03:03] 2025-10-13 19:02:44,139 | INFO     | 
[2025-10-14 04:03:03] 2025-10-13 19:02:44,140 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-14 04:03:03] 2025-10-13 19:02:44,151 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 04:03:03] 2025-10-13 19:02:44,151 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 04:03:03] 2025-10-13 19:02:44,152 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 04:03:03] 2025-10-13 19:02:44,152 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 04:03:03] 2025-10-13 19:02:44,152 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 04:03:03] 2025-10-13 19:02:44,152 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 04:03:03] 2025-10-13 19:02:44,152 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 04:03:03] 2025-10-13 19:02:44,152 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 04:03:03] 2025-10-13 19:02:44,152 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 04:03:03] 2025-10-13 19:02:44,152 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 04:03:03] 2025-10-13 19:02:44,152 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 04:03:03] 2025-10-13 19:02:44,152 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 04:03:03] 2025-10-13 19:02:44,152 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 04:03:03] 2025-10-13 19:02:44,152 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 04:03:03] 2025-10-13 19:02:44,152 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 04:03:03] 2025-10-13 19:02:44,152 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 04:03:03] 2025-10-13 19:02:44,152 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 04:03:03] 2025-10-13 19:02:44,152 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 04:03:03] 2025-10-13 19:02:44,153 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 04:03:03] 2025-10-13 19:02:44,153 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 04:03:03] 2025-10-13 19:02:44,153 | INFO     | job 6843137971 has completed (purged errors)
[2025-10-14 04:03:03] 2025-10-13 19:02:44,153 | INFO     | overall cleanup function is called
[2025-10-14 04:03:03] 2025-10-13 19:02:45,160 | INFO     | --- collectZombieJob: --- 10, [241052]
[2025-10-14 04:03:03] 2025-10-13 19:02:45,160 | INFO     | zombie collector waiting for pid 241052
[2025-10-14 04:03:03] 2025-10-13 19:02:45,160 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 04:03:03] 2025-10-13 19:02:45,160 | INFO     | collected zombie processes
[2025-10-14 04:03:03] 2025-10-13 19:02:45,160 | INFO     | will attempt to kill all subprocesses of pid=241052
[2025-10-14 04:03:03] 2025-10-13 19:02:45,219 | INFO     | process IDs to be killed: [241052] (in reverse order)
[2025-10-14 04:03:03] 2025-10-13 19:02:45,248 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 04:03:03] 2025-10-13 19:02:45,248 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 04:03:03] 2025-10-13 19:02:45,251 | INFO     | did not find any defunct processes belonging to 241052
[2025-10-14 04:03:03] 2025-10-13 19:02:45,253 | INFO     | did not find any defunct processes belonging to 241052
[2025-10-14 04:03:03] 2025-10-13 19:02:45,253 | INFO     | ready for new job
[2025-10-14 04:03:03] 2025-10-13 19:02:45,253 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 04:03:03] 2025-10-13 19:02:45,254 | INFO     | ***************************************
[2025-10-14 04:03:03] 2025-10-13 19:02:45,254 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 04:03:03] 2025-10-13 19:02:45,254 | INFO     | ***************************************
[2025-10-14 04:03:03] 2025-10-13 19:02:45,254 | INFO     | 
[2025-10-14 04:03:03] 2025-10-13 19:02:45,255 | INFO     | architecture information:
[2025-10-14 04:03:03] 2025-10-13 19:02:45,255 | INFO     | executing command: cat /etc/os-release
[2025-10-14 04:03:03] 2025-10-13 19:02:45,265 | INFO     | cat /etc/os-release:
[2025-10-14 04:03:03] NAME="CentOS Linux"
[2025-10-14 04:03:03] VERSION="7 (Core)"
[2025-10-14 04:03:03] ID="centos"
[2025-10-14 04:03:03] ID_LIKE="rhel fedora"
[2025-10-14 04:03:03] VERSION_ID="7"
[2025-10-14 04:03:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 04:03:03] ANSI_COLOR="0;31"
[2025-10-14 04:03:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 04:03:03] HOME_URL="https://www.centos.org/"
[2025-10-14 04:03:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 04:03:03] 
[2025-10-14 04:03:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 04:03:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 04:03:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 04:03:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 04:03:03] 
[2025-10-14 04:03:03] 2025-10-13 19:02:45,265 | INFO     | ***************************************
[2025-10-14 04:03:03] 2025-10-13 19:02:45,768 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-14 04:03:03] 2025-10-13 19:02:45,779 | INFO     | sufficient remaining disk space (99212066816 B)
[2025-10-14 04:03:03] 2025-10-13 19:02:45,779 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 04:03:03] 2025-10-13 19:02:45,779 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 04:03:03] 2025-10-13 19:02:45,779 | INFO     | update_server=False
[2025-10-14 04:03:03] 2025-10-13 19:02:45,779 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 04:03:03] 2025-10-13 19:02:45,780 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 04:03:03] 2025-10-13 19:02:45,780 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-14 04:03:03] 2025-10-13 19:02:45,780 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 04:03:03] 2025-10-13 19:02:45,780 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 04:03:03] 2025-10-13 19:02:45,780 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 04:03:03] 2025-10-13 19:02:45,780 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 04:03:03] 2025-10-13 19:02:45,821 | INFO     | all data control threads have been joined
[2025-10-14 04:03:03] 2025-10-13 19:02:45,856 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 04:03:03] 2025-10-13 19:02:46,066 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-14 04:03:03] 2025-10-13 19:02:46,066 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-14 04:03:03] 2025-10-13 19:02:46,066 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 04:03:03] 2025-10-13 19:02:46,066 | INFO     | will abort loop
[2025-10-14 04:03:03] 2025-10-13 19:02:46,432 | INFO     | all payload control threads have been joined
[2025-10-14 04:03:03] 2025-10-13 19:02:46,452 | INFO     | [monitor] cgroup control has ended
[2025-10-14 04:03:03] 2025-10-13 19:02:46,785 | INFO     | [job] retrieve thread has finished
[2025-10-14 04:03:03] 2025-10-13 19:02:46,785 | INFO     | [job] queue monitor thread has finished
[2025-10-14 04:03:03] 2025-10-13 19:02:46,819 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 04:03:03] 2025-10-13 19:02:46,826 | INFO     | [data] control thread has finished
[2025-10-14 04:03:03] 2025-10-13 19:02:46,829 | INFO     | all job control threads have been joined
[2025-10-14 04:03:03] 2025-10-13 19:02:46,995 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 04:03:03] 2025-10-13 19:02:47,051 | INFO     | [data] copytool_in thread has finished
[2025-10-14 04:03:03] 2025-10-13 19:02:47,072 | INFO     | [job] job monitor thread has finished
[2025-10-14 04:03:03] 2025-10-13 19:02:47,437 | INFO     | [payload] control thread has finished
[2025-10-14 04:03:03] 2025-10-13 19:02:47,464 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 04:03:03] 2025-10-13 19:02:47,524 | INFO     | [payload] failed_post thread has finished
[2025-10-14 04:03:03] 2025-10-13 19:02:47,786 | INFO     | [data] copytool_out thread has finished
[2025-10-14 04:03:03] 2025-10-13 19:02:47,834 | INFO     | [job] control thread has finished
[2025-10-14 04:03:03] 2025-10-13 19:02:48,036 | INFO     | [payload] validate_post thread has finished
[2025-10-14 04:03:03] 2025-10-13 19:02:48,247 | INFO     | [job] validate thread has finished
[2025-10-14 04:03:03] 2025-10-13 19:02:49,863 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 04:03:03] 2025-10-13 19:02:55,887 | INFO     | job.realtimelogging is not enabled
[2025-10-14 04:03:03] 2025-10-13 19:02:56,893 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 04:03:03] 2025-10-13 19:02:57,999 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140109828589376)>', '<ExcThread(monitor, started 140109189990144)>']
[2025-10-14 04:03:03] 2025-10-13 19:02:58,849 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 04:03:03] 2025-10-13 19:02:58,849 | INFO     | [monitor] control thread has ended
[2025-10-14 04:03:03] 2025-10-13 19:03:03,024 | INFO     | all workflow threads have been joined
[2025-10-14 04:03:03] 2025-10-13 19:03:03,024 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 04:03:03] 2025-10-13 19:03:03,024 | INFO     | traces error code: 0
[2025-10-14 04:03:03] 2025-10-13 19:03:03,025 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 04:03:03] 2025-10-13 19:03:03,088 [wrapper] ==== pilot stdout END ====
[2025-10-14 04:03:03] 2025-10-13 19:03:03,090 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 04:03:03] 2025-10-13 19:03:03,091 [wrapper] pilotpid: 234284
[2025-10-14 04:03:03] 2025-10-13 19:03:03,093 [wrapper] Pilot exit status: 0
[2025-10-14 04:03:03] 2025-10-13 19:03:03,100 [wrapper] pandaids: 6843137971
[2025-10-14 04:03:03] 2025-10-13 19:03:03,121 [wrapper] cleanup supervisor_pilot  253266 234285
[2025-10-14 04:03:03] 2025-10-13 19:03:03,123 [wrapper] Test setup, not cleaning
[2025-10-14 04:03:03] 2025-10-13 19:03:03,124 [wrapper] apfmon messages muted
[2025-10-14 04:03:03] 2025-10-13 19:03:03,126 [wrapper] ==== wrapper stdout END ====
[2025-10-14 04:03:03] 2025-10-13 19:03:03,128 [wrapper] ==== wrapper stderr END ====
[2025-10-14 04:03:03]  *** Error codes and diagnostics ***
[2025-10-14 04:03:03]     "exeErrorCode": 0,
[2025-10-14 04:03:03]     "exeErrorDiag": "",
[2025-10-14 04:03:03]     "pilotErrorCode": 0,
[2025-10-14 04:03:03]     "pilotErrorDiag": "",
[2025-10-14 04:03:03]  *** Listing of results directory ***
[2025-10-14 04:03:03] total 416076
[2025-10-14 04:03:03] -rw-r--r--. 1 boinc boinc      5112 Oct 14 00:59 queuedata.json
[2025-10-14 04:03:03] -rwx------. 1 boinc boinc     36292 Oct 14 01:02 runpilot2-wrapper.sh
[2025-10-14 04:03:03] -rw-r--r--. 1 boinc boinc    557409 Oct 14 01:02 pilot3.tar.gz
[2025-10-14 04:03:03] -rw-r--r--. 1 boinc boinc       100 Oct 14 02:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 04:03:03] -rwxr-xr-x. 1 boinc boinc      7986 Oct 14 02:49 run_atlas
[2025-10-14 04:03:03] -rw-r--r--. 1 boinc boinc       105 Oct 14 02:49 job.xml
[2025-10-14 04:03:03] -rw-r--r--. 1 boinc boinc      9362 Oct 14 02:49 init_data.xml
[2025-10-14 04:03:03] -rw-r--r--. 2 boinc boinc 224014903 Oct 14 02:49 EVNT.46676267._004307.pool.root.1
[2025-10-14 04:03:03] -rw-r--r--. 2 boinc boinc     15120 Oct 14 02:49 start_atlas.sh
[2025-10-14 04:03:03] drwxrwx--x. 2 boinc boinc        68 Oct 14 02:49 shared
[2025-10-14 04:03:03] -rw-r--r--. 2 boinc boinc    569686 Oct 14 02:49 input.tar.gz
[2025-10-14 04:03:03] -rw-r--r--. 1 boinc boinc         0 Oct 14 02:49 boinc_lockfile
[2025-10-14 04:03:03] -rw-r--r--. 1 boinc boinc      2549 Oct 14 02:49 pandaJob.out
[2025-10-14 04:03:03] -rw-------. 1 boinc boinc    972791 Oct 14 02:49 agis_schedconf.cvmfs.json
[2025-10-14 04:03:03] -rw-------. 1 boinc boinc   1560580 Oct 14 02:49 agis_ddmendpoints.agis.ALL.json
[2025-10-14 04:03:03] drwx------. 5 boinc boinc      4096 Oct 14 02:49 pilot3
[2025-10-14 04:03:03] -rw-------. 1 boinc boinc 196286824 Oct 14 04:01 HITS.46676269._096912.pool.root.1
[2025-10-14 04:03:03] -rw-r--r--. 1 boinc boinc       529 Oct 14 04:01 boinc_task_state.xml
[2025-10-14 04:03:03] -rw-------. 1 boinc boinc      1015 Oct 14 04:01 memory_monitor_summary.json
[2025-10-14 04:03:03] -rw-------. 1 boinc boinc    296365 Oct 14 04:01 log.46676269._096912.job.log.tgz.1
[2025-10-14 04:03:03] -rw-------. 1 boinc boinc        95 Oct 14 04:01 pilot_heartbeat.json
[2025-10-14 04:03:03] -rw-------. 1 boinc boinc      7747 Oct 14 04:02 heartbeat.json
[2025-10-14 04:03:03] -rw-r--r--. 1 boinc boinc      8192 Oct 14 04:02 boinc_mmap_file
[2025-10-14 04:03:03] -rw-r--r--. 1 boinc boinc        27 Oct 14 04:02 wrapper_checkpoint.txt
[2025-10-14 04:03:03] -rw-------. 1 boinc boinc      4810 Oct 14 04:03 pilotlog.txt
[2025-10-14 04:03:03] -rw-------. 1 boinc boinc    638031 Oct 14 04:03 log.46676269._096912.job.log.1
[2025-10-14 04:03:03] -rw-------. 1 boinc boinc       357 Oct 14 04:03 output.list
[2025-10-14 04:03:03] -rw-r--r--. 1 boinc boinc       620 Oct 14 04:03 runtime_log
[2025-10-14 04:03:03] -rw-------. 1 boinc boinc    952320 Oct 14 04:03 result.tar.gz
[2025-10-14 04:03:03] -rw-r--r--. 1 boinc boinc      8661 Oct 14 04:03 runtime_log.err
[2025-10-14 04:03:03] -rw-------. 1 boinc boinc       641 Oct 14 04:03 5vbLDmHBaS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmykVMDmwG2vam.diag
[2025-10-14 04:03:03] -rw-r--r--. 1 boinc boinc     21858 Oct 14 04:03 stderr.txt
[2025-10-14 04:03:03] HITS file was successfully produced:
[2025-10-14 04:03:03] -rw-------. 1 boinc boinc 196286824 Oct 14 04:01 shared/HITS.pool.root.1
[2025-10-14 04:03:03]  *** Contents of shared directory: ***
[2025-10-14 04:03:03] total 411964
[2025-10-14 04:03:03] -rw-r--r--. 2 boinc boinc 224014903 Oct 14 02:49 ATLAS.root_0
[2025-10-14 04:03:03] -rw-r--r--. 2 boinc boinc     15120 Oct 14 02:49 start_atlas.sh
[2025-10-14 04:03:03] -rw-r--r--. 2 boinc boinc    569686 Oct 14 02:49 input.tar.gz
[2025-10-14 04:03:03] -rw-------. 1 boinc boinc 196286824 Oct 14 04:01 HITS.pool.root.1
[2025-10-14 04:03:03] -rw-------. 1 boinc boinc    952320 Oct 14 04:03 result.tar.gz
04:03:04 (230484): run_atlas exited; CPU time 23290.515052
04:03:04 (230484): called boinc_finish(0)

</stderr_txt>
]]>

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