Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:56:52 (4176490): wrapper (7.7.26015): starting
22:56:52 (4176490): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 22:56:52] Arguments: --nthreads 3
[2025-10-13 22:56:52] Threads: 3
[2025-10-13 22:56:52] Checking for CVMFS
[2025-10-13 22:56:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 22:56:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 22:56:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 22:56:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 22:56:52] 2.9.2.0 2254445 6368 86904 151672 0 57 30426573 36864000 0 130560 0 5055468 99.991 217276 799 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 22:56:52] CVMFS is ok
[2025-10-13 22:56:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 22:56:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 22:56:52] Further information can be found at the LHC@home message board.
[2025-10-13 22:56:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 22:56:52] Checking for apptainer binary...
[2025-10-13 22:56:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 22:56:52] Running /usr/bin/apptainer --version
[2025-10-13 22:56:52] apptainer version 1.4.1-1.1
[2025-10-13 22:56:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 22:56:52] atlasA230
[2025-10-13 22:56:52] apptainer works
[2025-10-13 22:56:52] Set ATHENA_PROC_NUMBER=3
[2025-10-13 22:56:52] Set ATHENA_CORE_NUMBER=3
[2025-10-13 22:56:52] Starting ATLAS job with PandaID=6840748826
[2025-10-13 22:56:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 00:15:19]  *** The last 200 lines of the pilot log: ***
[2025-10-14 00:15:19] 2025-10-13 22:15:02,060 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-14 00:15:19] 2025-10-13 22:15:02,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 00:15:19] 2025-10-13 22:15:02,060 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 00:15:19] 2025-10-13 22:15:02,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 00:15:19] 2025-10-13 22:15:02,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 00:15:19] 2025-10-13 22:15:02,503 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-14 00:15:19] 2025-10-13 22:15:02,504 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-14 00:15:19] 2025-10-13 22:15:02,504 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 00:15:19] 2025-10-13 22:15:02,504 | INFO     | will abort loop
[2025-10-14 00:15:19] 2025-10-13 22:15:02,643 | INFO     | all data control threads have been joined
[2025-10-14 00:15:19] 2025-10-13 22:15:02,946 | INFO     | all job control threads have been joined
[2025-10-14 00:15:19] 2025-10-13 22:15:02,961 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 00:15:19] 2025-10-13 22:15:03,065 | INFO     | [job] retrieve thread has finished
[2025-10-14 00:15:19] 2025-10-13 22:15:03,066 | INFO     | [job] queue monitor thread has finished
[2025-10-14 00:15:19] 2025-10-13 22:15:03,077 | INFO     | [payload] failed_post thread has finished
[2025-10-14 00:15:19] 2025-10-13 22:15:03,106 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 00:15:19] 2025-10-13 22:15:03,140 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 00:15:19] 2025-10-13 22:15:03,431 | INFO     | [monitor] cgroup control has ended
[2025-10-14 00:15:19] 2025-10-13 22:15:03,508 | INFO     | [job] job monitor thread has finished
[2025-10-14 00:15:19] 2025-10-13 22:15:03,546 | INFO     | all payload control threads have been joined
[2025-10-14 00:15:19] 2025-10-13 22:15:03,649 | INFO     | [data] control thread has finished
[2025-10-14 00:15:19] 2025-10-13 22:15:03,671 | INFO     | [payload] validate_post thread has finished
[2025-10-14 00:15:19] 2025-10-13 22:15:03,946 | INFO     | [data] copytool_in thread has finished
[2025-10-14 00:15:19] 2025-10-13 22:15:03,951 | INFO     | [job] control thread has finished
[2025-10-14 00:15:19] 2025-10-13 22:15:04,516 | INFO     | [job] validate thread has finished
[2025-10-14 00:15:19] 2025-10-13 22:15:04,552 | INFO     | [payload] control thread has finished
[2025-10-14 00:15:19] 2025-10-13 22:15:04,561 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 00:15:19] 2025-10-13 22:15:04,967 | INFO     | [data] copytool_out thread has finished
[2025-10-14 00:15:19] 2025-10-13 22:15:05,488 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 00:15:19] 2025-10-13 22:15:09,495 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 00:15:19] 2025-10-13 22:15:12,383 | INFO     | job.realtimelogging is not enabled
[2025-10-14 00:15:19] 2025-10-13 22:15:13,387 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 00:15:19] 2025-10-13 22:15:14,102 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140360416474944)>', '<ExcThread(monitor, started 140359782881024)>']
[2025-10-14 00:15:19] 2025-10-13 22:15:14,121 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 00:15:19] 2025-10-13 22:15:14,121 | INFO     | [monitor] control thread has ended
[2025-10-14 00:15:19] 2025-10-13 22:15:19,127 | INFO     | all workflow threads have been joined
[2025-10-14 00:15:19] 2025-10-13 22:15:19,127 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 00:15:19] 2025-10-13 22:15:19,128 | INFO     | traces error code: 0
[2025-10-14 00:15:19] 2025-10-13 22:15:19,128 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 00:15:19] 2025-10-13 22:15:19,178 [wrapper] ==== pilot stdout END ====
[2025-10-14 00:15:19] 2025-10-13 22:15:19,181 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 00:15:19] 2025-10-13 22:15:19,183 [wrapper] pilotpid: 4180203
[2025-10-14 00:15:19] 2025-10-13 22:15:19,185 [wrapper] Pilot exit status: 0
[2025-10-14 00:15:19] 2025-10-13 22:15:19,192 [wrapper] pandaids: 6840748826
[2025-10-14 00:15:19] 2025-10-13 22:15:19,208 [wrapper] cleanup supervisor_pilot    5112 4180204
[2025-10-14 00:15:19] 2025-10-13 22:15:19,211 [wrapper] Test setup, not cleaning
[2025-10-14 00:15:19] 2025-10-13 22:15:19,213 [wrapper] apfmon messages muted
[2025-10-14 00:15:19] 2025-10-13 22:15:19,215 [wrapper] ==== wrapper stdout END ====
[2025-10-14 00:15:19] 2025-10-13 22:15:19,218 [wrapper] ==== wrapper stderr END ====
[2025-10-14 00:15:19]  *** Error codes and diagnostics ***
[2025-10-14 00:15:19]     "exeErrorCode": 0,
[2025-10-14 00:15:19]     "exeErrorDiag": "",
[2025-10-14 00:15:19]     "pilotErrorCode": 0,
[2025-10-14 00:15:19]     "pilotErrorDiag": "",
[2025-10-14 00:15:19]  *** Listing of results directory ***
[2025-10-14 00:15:19] total 404040
[2025-10-14 00:15:19] -rw-r--r-- 1 boinc boinc    557409 Oct 12 22:08 pilot3.tar.gz
[2025-10-14 00:15:19] -rw-r--r-- 1 boinc boinc      5112 Oct 12 22:12 queuedata.json
[2025-10-14 00:15:19] -rwx------ 1 boinc boinc     36292 Oct 12 22:12 runpilot2-wrapper.sh
[2025-10-14 00:15:19] -rw-r--r-- 1 boinc boinc       100 Oct 13 22:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 00:15:19] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 22:56 run_atlas
[2025-10-14 00:15:19] -rw-r--r-- 1 boinc boinc       105 Oct 13 22:56 job.xml
[2025-10-14 00:15:19] -rw-r--r-- 2 boinc boinc 217727855 Oct 13 22:56 EVNT.46676267._002136.pool.root.1
[2025-10-14 00:15:19] -rw-r--r-- 2 boinc boinc    569683 Oct 13 22:56 input.tar.gz
[2025-10-14 00:15:19] -rw-r--r-- 2 boinc boinc     15120 Oct 13 22:56 start_atlas.sh
[2025-10-14 00:15:19] drwxrwx--x 2 boinc boinc      4096 Oct 13 22:56 shared
[2025-10-14 00:15:19] -rw-r--r-- 1 boinc boinc         0 Oct 13 22:56 boinc_setup_complete
[2025-10-14 00:15:19] -rw-r--r-- 1 boinc boinc      6442 Oct 13 22:56 init_data.xml
[2025-10-14 00:15:19] -rw-r--r-- 1 boinc boinc         0 Oct 13 22:56 boinc_lockfile
[2025-10-14 00:15:19] -rw-r--r-- 1 boinc boinc      2550 Oct 13 22:56 pandaJob.out
[2025-10-14 00:15:19] -rw------- 1 boinc boinc    972799 Oct 13 22:56 agis_schedconf.cvmfs.json
[2025-10-14 00:15:19] -rw------- 1 boinc boinc   1560580 Oct 13 22:56 agis_ddmendpoints.agis.ALL.json
[2025-10-14 00:15:19] drwx------ 5 boinc boinc      4096 Oct 13 22:56 pilot3
[2025-10-14 00:15:19] -rw------- 1 boinc boinc        95 Oct 14 00:14 pilot_heartbeat.json
[2025-10-14 00:15:19] -rw-r--r-- 1 boinc boinc       529 Oct 14 00:14 boinc_task_state.xml
[2025-10-14 00:15:19] -rw------- 1 boinc boinc 190240698 Oct 14 00:14 HITS.46676269._088392.pool.root.1
[2025-10-14 00:15:19] -rw------- 1 boinc boinc      1033 Oct 14 00:14 memory_monitor_summary.json
[2025-10-14 00:15:19] -rw------- 1 boinc boinc    247554 Oct 14 00:14 log.46676269._088392.job.log.tgz.1
[2025-10-14 00:15:19] -rw------- 1 boinc boinc      7765 Oct 14 00:15 heartbeat.json
[2025-10-14 00:15:19] -rw-r--r-- 1 boinc boinc      8192 Oct 14 00:15 boinc_mmap_file
[2025-10-14 00:15:19] -rw-r--r-- 1 boinc boinc        27 Oct 14 00:15 wrapper_checkpoint.txt
[2025-10-14 00:15:19] -rw------- 1 boinc boinc      4814 Oct 14 00:15 pilotlog.txt
[2025-10-14 00:15:19] -rw------- 1 boinc boinc    690951 Oct 14 00:15 log.46676269._088392.job.log.1
[2025-10-14 00:15:19] -rw------- 1 boinc boinc       357 Oct 14 00:15 output.list
[2025-10-14 00:15:19] -rw-r--r-- 1 boinc boinc       620 Oct 14 00:15 runtime_log
[2025-10-14 00:15:19] -rw------- 1 boinc boinc    962560 Oct 14 00:15 result.tar.gz
[2025-10-14 00:15:19] -rw-r--r-- 1 boinc boinc      8792 Oct 14 00:15 runtime_log.err
[2025-10-14 00:15:19] -rw------- 1 boinc boinc       661 Oct 14 00:15 JQWMDmybHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrOlNDmekvvRo.diag
[2025-10-14 00:15:19] -rw-r--r-- 1 boinc boinc      7443 Oct 14 00:15 stderr.txt
[2025-10-14 00:15:19] HITS file was successfully produced:
[2025-10-14 00:15:19] -rw------- 1 boinc boinc 190240698 Oct 14 00:14 shared/HITS.pool.root.1
[2025-10-14 00:15:19]  *** Contents of shared directory: ***
[2025-10-14 00:15:19] total 399936
[2025-10-14 00:15:19] -rw-r--r-- 2 boinc boinc 217727855 Oct 13 22:56 ATLAS.root_0
[2025-10-14 00:15:19] -rw-r--r-- 2 boinc boinc    569683 Oct 13 22:56 input.tar.gz
[2025-10-14 00:15:19] -rw-r--r-- 2 boinc boinc     15120 Oct 13 22:56 start_atlas.sh
[2025-10-14 00:15:19] -rw------- 1 boinc boinc 190240698 Oct 14 00:14 HITS.pool.root.1
[2025-10-14 00:15:19] -rw------- 1 boinc boinc    962560 Oct 14 00:15 result.tar.gz
00:15:20 (4176490): run_atlas exited; CPU time 13410.463101
00:15:20 (4176490): called boinc_finish(0)

</stderr_txt>
]]>

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