Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:46:21 (8828): wrapper (7.7.26015): starting
11:46:21 (8828): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 11:46:21] Arguments: --nthreads 8
[2025-10-13 11:46:21] Threads: 8
[2025-10-13 11:46:21] Checking for CVMFS
[2025-10-13 11:46:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 11:46:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 11:46:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 11:46:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 11:46:21] 2.11.2.0 2934 113662 81852 151666 3 1 16188518 20275201 1 130560 1 51249689 99.986 3912076 21428 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 11:46:21] CVMFS is ok
[2025-10-13 11:46:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 11:46:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 11:46:21] Further information can be found at the LHC@home message board.
[2025-10-13 11:46:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 11:46:21] Checking for apptainer binary...
[2025-10-13 11:46:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 11:46:21] Running /usr/bin/apptainer --version
[2025-10-13 11:46:22] apptainer version 1.3.2-1.el7
[2025-10-13 11:46:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 11:46:23] c-204-33.aglt2.org
[2025-10-13 11:46:23] apptainer works
[2025-10-13 11:46:23] Set ATHENA_PROC_NUMBER=8
[2025-10-13 11:46:23] Set ATHENA_CORE_NUMBER=8
[2025-10-13 11:46:23] Starting ATLAS job with PandaID=6843118094
[2025-10-13 11:46:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:51:00]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:51:00] 2025-10-13 17:50:02,520 | INFO     | monitor loop #546: job 0:6843118094 is in state 'finished'
[2025-10-13 13:51:00] 2025-10-13 17:50:02,520 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:51:00] 2025-10-13 17:50:02,551 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 13:51:00] 2025-10-13 17:50:02,556 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-10-13 13:51:00] 2025-10-13 17:50:02,558 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6843118094/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 13:51:00] 2025-10-13 17:50:02,559 | INFO     | extracted standard info from prmon json
[2025-10-13 13:51:00] 2025-10-13 17:50:02,559 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 13:51:00] 2025-10-13 17:50:02,559 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 13:51:00] 2025-10-13 17:50:02,560 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 13:51:00] 2025-10-13 17:50:02,560 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 13:51:00] 2025-10-13 17:50:02,564 | INFO     | fitting pss+swap vs Time
[2025-10-13 13:51:00] 2025-10-13 17:50:02,564 | INFO     | sum of square deviations: 549294020.0
[2025-10-13 13:51:00] 2025-10-13 17:50:02,565 | INFO     | sum of deviations: 3456548408.0000014
[2025-10-13 13:51:00] 2025-10-13 17:50:02,565 | INFO     | mean x: 1760374093.0
[2025-10-13 13:51:00] 2025-10-13 17:50:02,565 | INFO     | mean y: 2507449.5950413225
[2025-10-13 13:51:00] 2025-10-13 17:50:02,565 | INFO     | -- intersect: -11075017604.55282
[2025-10-13 13:51:00] 2025-10-13 17:50:02,565 | INFO     | intersect: -11075017604.55282
[2025-10-13 13:51:00] 2025-10-13 17:50:02,566 | INFO     | chi2: 1.5922534944837625
[2025-10-13 13:51:00] 2025-10-13 17:50:02,566 | INFO     | sum of square deviations: 483971865.0
[2025-10-13 13:51:00] 2025-10-13 17:50:02,566 | INFO     | sum of deviations: 3440710825.5000024
[2025-10-13 13:51:00] 2025-10-13 17:50:02,567 | INFO     | mean x: 1760373940.5
[2025-10-13 13:51:00] 2025-10-13 17:50:02,567 | INFO     | mean y: 2507412.853448276
[2025-10-13 13:51:00] 2025-10-13 17:50:02,567 | INFO     | -- intersect: -12512554126.945868
[2025-10-13 13:51:00] 2025-10-13 17:50:02,567 | INFO     | intersect: -12512554126.945868
[2025-10-13 13:51:00] 2025-10-13 17:50:02,567 | INFO     | chi2: 1.5940859433977674
[2025-10-13 13:51:00] 2025-10-13 17:50:02,567 | INFO     | current chi2=1.5940859433977674 (change=-0.11508524995255401 %)
[2025-10-13 13:51:00] 2025-10-13 17:50:02,567 | INFO     | right removable region: 115
[2025-10-13 13:51:00] 2025-10-13 17:50:02,568 | INFO     | sum of square deviations: 483971865.0
[2025-10-13 13:51:00] 2025-10-13 17:50:02,568 | INFO     | sum of deviations: -14579484492.500002
[2025-10-13 13:51:00] 2025-10-13 17:50:02,568 | INFO     | mean x: 1760374245.5
[2025-10-13 13:51:00] 2025-10-13 17:50:02,568 | INFO     | mean y: 2548748.870689655
[2025-10-13 13:51:00] 2025-10-13 17:50:02,569 | INFO     | -- intersect: 53033212036.00958
[2025-10-13 13:51:00] 2025-10-13 17:50:02,569 | INFO     | intersect: 53033212036.00958
[2025-10-13 13:51:00] 2025-10-13 17:50:02,569 | INFO     | chi2: 0.11276165782164412
[2025-10-13 13:51:00] 2025-10-13 17:50:02,569 | INFO     | current chi2=0.11276165782164412 (change=92.91810894356344 %)
[2025-10-13 13:51:00] 2025-10-13 17:50:02,569 | INFO     | sum of square deviations: 424045160.0
[2025-10-13 13:51:00] 2025-10-13 17:50:02,570 | INFO     | sum of deviations: -12654398698.999998
[2025-10-13 13:51:00] 2025-10-13 17:50:02,570 | INFO     | mean x: 1760374398.0
[2025-10-13 13:51:00] 2025-10-13 17:50:02,570 | INFO     | mean y: 2543738.8018018017
[2025-10-13 13:51:00] 2025-10-13 17:50:02,570 | INFO     | -- intersect: 52535815175.74995
[2025-10-13 13:51:00] 2025-10-13 17:50:02,571 | INFO     | intersect: 52535815175.74995
[2025-10-13 13:51:00] 2025-10-13 17:50:02,571 | INFO     | chi2: 0.10175103098298763
[2025-10-13 13:51:00] 2025-10-13 17:50:02,571 | INFO     | current chi2=0.10175103098298763 (change=9.764513090142813 %)
[2025-10-13 13:51:00] 2025-10-13 17:50:02,571 | INFO     | left removable region: 20
[2025-10-13 13:51:00] 2025-10-13 17:50:02,572 | INFO     | sum of square deviations: 265828240.0
[2025-10-13 13:51:00] 2025-10-13 17:50:02,572 | INFO     | sum of deviations: -4763788717.0
[2025-10-13 13:51:00] 2025-10-13 17:50:02,572 | INFO     | mean x: 1760374520.0
[2025-10-13 13:51:00] 2025-10-13 17:50:02,572 | INFO     | mean y: 2522258.263157895
[2025-10-13 13:51:00] 2025-10-13 17:50:02,572 | INFO     | -- intersect: 31549404847.07423
[2025-10-13 13:51:00] 2025-10-13 17:50:02,572 | INFO     | intersect: 31549404847.07423
[2025-10-13 13:51:00] 2025-10-13 17:50:02,573 | INFO     | chi2: 0.06360716579093052
[2025-10-13 13:51:00] 2025-10-13 17:50:02,573 | INFO     | -- intersect: 31549404847.07423
[2025-10-13 13:51:00] 2025-10-13 17:50:02,573 | INFO     | current memory leak: -17.92 B/s (using 95 data points, chi2=0.06)
[2025-10-13 13:51:00] 2025-10-13 17:50:02,573 | INFO     | could have reported an average CPU frequency of 1928 MHz (8 samples)
[2025-10-13 13:51:00] 2025-10-13 17:50:02,574 | INFO     | ..............................
[2025-10-13 13:51:00] 2025-10-13 17:50:02,574 | INFO     | . Timing measurements:
[2025-10-13 13:51:00] 2025-10-13 17:50:02,574 | INFO     | . get job = 0 s
[2025-10-13 13:51:00] 2025-10-13 17:50:02,574 | INFO     | . initial setup = 2 s
[2025-10-13 13:51:00] 2025-10-13 17:50:02,574 | INFO     | . payload setup = 8 s
[2025-10-13 13:51:00] 2025-10-13 17:50:02,574 | INFO     | . stage-in = 0 s
[2025-10-13 13:51:00] 2025-10-13 17:50:02,574 | INFO     | . payload execution = 7362 s
[2025-10-13 13:51:00] 2025-10-13 17:50:02,574 | INFO     | . stage-out = 0 s
[2025-10-13 13:51:00] 2025-10-13 17:50:02,574 | INFO     | . log creation = 0 s
[2025-10-13 13:51:00] 2025-10-13 17:50:02,575 | INFO     | ..............................
[2025-10-13 13:51:00] 2025-10-13 17:50:03,086 | INFO     | 
[2025-10-13 13:51:00] 2025-10-13 17:50:03,086 | INFO     | job summary report
[2025-10-13 13:51:00] 2025-10-13 17:50:03,087 | INFO     | --------------------------------------------------
[2025-10-13 13:51:00] 2025-10-13 17:50:03,087 | INFO     | PanDA job id: 6843118094
[2025-10-13 13:51:00] 2025-10-13 17:50:03,087 | INFO     | task id: 46676269
[2025-10-13 13:51:00] 2025-10-13 17:50:03,087 | INFO     | errors: (none)
[2025-10-13 13:51:00] 2025-10-13 17:50:03,087 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 13:51:00] 2025-10-13 17:50:03,087 | INFO     | pilot state: finished 
[2025-10-13 13:51:00] 2025-10-13 17:50:03,088 | INFO     | transexitcode: 0
[2025-10-13 13:51:00] 2025-10-13 17:50:03,088 | INFO     | exeerrorcode: 0
[2025-10-13 13:51:00] 2025-10-13 17:50:03,088 | INFO     | exeerrordiag: 
[2025-10-13 13:51:00] 2025-10-13 17:50:03,088 | INFO     | exitcode: 0
[2025-10-13 13:51:00] 2025-10-13 17:50:03,088 | INFO     | exitmsg: OK
[2025-10-13 13:51:00] 2025-10-13 17:50:03,088 | INFO     | cpuconsumptiontime: 54850 s
[2025-10-13 13:51:00] 2025-10-13 17:50:03,089 | INFO     | nevents: 400
[2025-10-13 13:51:00] 2025-10-13 17:50:03,089 | INFO     | neventsw: 0
[2025-10-13 13:51:00] 2025-10-13 17:50:03,089 | INFO     | pid: 19003
[2025-10-13 13:51:00] 2025-10-13 17:50:03,089 | INFO     | pgrp: 19003
[2025-10-13 13:51:00] 2025-10-13 17:50:03,089 | INFO     | corecount: 8
[2025-10-13 13:51:00] 2025-10-13 17:50:03,089 | INFO     | event service: False
[2025-10-13 13:51:00] 2025-10-13 17:50:03,090 | INFO     | sizes: {0: 2348856, 6: 2349118, 11: 2349146, 7375: 2376544, 7376: 2385542, 7378: 2385598, 7384: 2385920}
[2025-10-13 13:51:00] 2025-10-13 17:50:03,090 | INFO     | --------------------------------------------------
[2025-10-13 13:51:00] 2025-10-13 17:50:03,090 | INFO     | 
[2025-10-13 13:51:00] 2025-10-13 17:50:03,090 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 13:51:00] 2025-10-13 17:50:03,120 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 13:51:00] 2025-10-13 17:50:03,120 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 13:51:00] 2025-10-13 17:50:03,120 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 13:51:00] 2025-10-13 17:50:03,121 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 13:51:00] 2025-10-13 17:50:03,121 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 13:51:00] 2025-10-13 17:50:03,121 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 13:51:00] 2025-10-13 17:50:03,121 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 13:51:00] 2025-10-13 17:50:03,121 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 13:51:00] 2025-10-13 17:50:03,122 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 13:51:00] 2025-10-13 17:50:03,122 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 13:51:00] 2025-10-13 17:50:03,122 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 13:51:00] 2025-10-13 17:50:03,122 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 13:51:00] 2025-10-13 17:50:03,122 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 13:51:00] 2025-10-13 17:50:03,123 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 13:51:00] 2025-10-13 17:50:03,123 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 13:51:00] 2025-10-13 17:50:03,123 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 13:51:00] 2025-10-13 17:50:03,123 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 13:51:00] 2025-10-13 17:50:03,123 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 13:51:00] 2025-10-13 17:50:03,123 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 13:51:00] 2025-10-13 17:50:03,124 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 13:51:00] 2025-10-13 17:50:03,124 | INFO     | job 6843118094 has completed (purged errors)
[2025-10-13 13:51:00] 2025-10-13 17:50:03,124 | INFO     | overall cleanup function is called
[2025-10-13 13:51:00] 2025-10-13 17:50:04,132 | INFO     | --- collectZombieJob: --- 10, [19003]
[2025-10-13 13:51:00] 2025-10-13 17:50:04,132 | INFO     | zombie collector waiting for pid 19003
[2025-10-13 13:51:00] 2025-10-13 17:50:04,132 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 13:51:00] 2025-10-13 17:50:04,133 | INFO     | collected zombie processes
[2025-10-13 13:51:00] 2025-10-13 17:50:04,133 | INFO     | will attempt to kill all subprocesses of pid=19003
[2025-10-13 13:51:00] 2025-10-13 17:50:04,234 | INFO     | process IDs to be killed: [19003] (in reverse order)
[2025-10-13 13:51:00] 2025-10-13 17:50:04,287 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 13:51:00] 2025-10-13 17:50:04,288 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 13:51:00] 2025-10-13 17:50:04,292 | INFO     | did not find any defunct processes belonging to 19003
[2025-10-13 13:51:00] 2025-10-13 17:50:04,296 | INFO     | did not find any defunct processes belonging to 19003
[2025-10-13 13:51:00] 2025-10-13 17:50:04,296 | INFO     | ready for new job
[2025-10-13 13:51:00] 2025-10-13 17:50:04,296 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 13:51:00] 2025-10-13 17:50:04,298 | INFO     | ***************************************
[2025-10-13 13:51:00] 2025-10-13 17:50:04,298 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 13:51:00] 2025-10-13 17:50:04,299 | INFO     | ***************************************
[2025-10-13 13:51:00] 2025-10-13 17:50:04,299 | INFO     | 
[2025-10-13 13:51:00] 2025-10-13 17:50:04,299 | INFO     | architecture information:
[2025-10-13 13:51:00] 2025-10-13 17:50:04,300 | INFO     | executing command: cat /etc/os-release
[2025-10-13 13:51:00] 2025-10-13 17:50:04,319 | INFO     | cat /etc/os-release:
[2025-10-13 13:51:00] NAME="CentOS Linux"
[2025-10-13 13:51:00] VERSION="7 (Core)"
[2025-10-13 13:51:00] ID="centos"
[2025-10-13 13:51:00] ID_LIKE="rhel fedora"
[2025-10-13 13:51:00] VERSION_ID="7"
[2025-10-13 13:51:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 13:51:00] ANSI_COLOR="0;31"
[2025-10-13 13:51:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 13:51:00] HOME_URL="https://www.centos.org/"
[2025-10-13 13:51:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 13:51:00] 
[2025-10-13 13:51:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 13:51:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 13:51:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:51:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:51:00] 
[2025-10-13 13:51:00] 2025-10-13 17:50:04,319 | INFO     | ***************************************
[2025-10-13 13:51:00] 2025-10-13 17:50:04,822 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 13:51:00] 2025-10-13 17:50:04,847 | INFO     | sufficient remaining disk space (18594398208 B)
[2025-10-13 13:51:00] 2025-10-13 17:50:04,848 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:51:00] 2025-10-13 17:50:04,848 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:51:00] 2025-10-13 17:50:04,848 | INFO     | update_server=False
[2025-10-13 13:51:00] 2025-10-13 17:50:04,848 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:51:00] 2025-10-13 17:50:04,918 | INFO     | all job control threads have been joined
[2025-10-13 13:51:00] 2025-10-13 17:50:05,024 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 13:51:00] 2025-10-13 17:50:05,024 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 13:51:00] 2025-10-13 17:50:05,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:51:00] 2025-10-13 17:50:05,024 | INFO     | will abort loop
[2025-10-13 13:51:00] 2025-10-13 17:50:05,035 | INFO     | all payload control threads have been joined
[2025-10-13 13:51:00] 2025-10-13 17:50:05,429 | INFO     | all data control threads have been joined
[2025-10-13 13:51:00] 2025-10-13 17:50:05,503 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:51:00] 2025-10-13 17:50:05,854 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:51:00] 2025-10-13 17:50:05,887 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:51:00] 2025-10-13 17:50:05,924 | INFO     | [job] control thread has finished
[2025-10-13 13:51:00] 2025-10-13 17:50:06,029 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:51:00] 2025-10-13 17:50:06,038 | INFO     | [payload] control thread has finished
[2025-10-13 13:51:00] 2025-10-13 17:50:06,213 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:51:00] 2025-10-13 17:50:06,428 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:51:00] 2025-10-13 17:50:06,434 | INFO     | [data] control thread has finished
[2025-10-13 13:51:00] 2025-10-13 17:50:06,582 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:51:00] 2025-10-13 17:50:06,582 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:51:00] 2025-10-13 17:50:07,214 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:51:00] 2025-10-13 17:50:07,276 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:51:00] 2025-10-13 17:50:07,278 | INFO     | [job] validate thread has finished
[2025-10-13 13:51:00] 2025-10-13 17:50:07,509 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:51:00] 2025-10-13 17:50:07,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:51:00] 2025-10-13 17:50:07,677 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:51:00] 2025-10-13 17:50:08,682 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:51:00] 2025-10-13 17:50:11,609 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:51:00] 2025-10-13 17:50:34,650 | INFO     | PID=12576 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 13:51:00] 2025-10-13 17:50:34,651 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:51:00] 2025-10-13 17:50:34,651 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:51:00] 2025-10-13 17:50:34,651 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:51:00] 2025-10-13 17:50:53,118 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:51:00] 2025-10-13 17:50:55,145 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139993032992576)>', '<ExcThread(monitor, started 139991900481280)>']
[2025-10-13 13:51:00] 2025-10-13 17:50:55,757 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:51:00] 2025-10-13 17:50:55,757 | INFO     | [monitor] control thread has ended
[2025-10-13 13:51:00] 2025-10-13 17:51:00,169 | INFO     | all workflow threads have been joined
[2025-10-13 13:51:00] 2025-10-13 17:51:00,170 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:51:00] 2025-10-13 17:51:00,170 | INFO     | traces error code: 0
[2025-10-13 13:51:00] 2025-10-13 17:51:00,170 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:51:00] 2025-10-13 17:51:00,285 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:51:00] 2025-10-13 17:51:00,290 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:51:00] 2025-10-13 17:51:00,294 [wrapper] pilotpid: 12576
[2025-10-13 13:51:00] 2025-10-13 17:51:00,299 [wrapper] Pilot exit status: 0
[2025-10-13 13:51:00] 2025-10-13 17:51:00,320 [wrapper] pandaids: 6843118094
[2025-10-13 13:51:00] 2025-10-13 17:51:00,371 [wrapper] cleanup supervisor_pilot 29646 12577
[2025-10-13 13:51:00] 2025-10-13 17:51:00,376 [wrapper] Test setup, not cleaning
[2025-10-13 13:51:00] 2025-10-13 17:51:00,380 [wrapper] apfmon messages muted
[2025-10-13 13:51:00] 2025-10-13 17:51:00,385 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:51:00] 2025-10-13 17:51:00,390 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:51:00]  *** Error codes and diagnostics ***
[2025-10-13 13:51:00]     "exeErrorCode": 0,
[2025-10-13 13:51:00]     "exeErrorDiag": "",
[2025-10-13 13:51:00]     "pilotErrorCode": 0,
[2025-10-13 13:51:00]     "pilotErrorDiag": "",
[2025-10-13 13:51:00]  *** Listing of results directory ***
[2025-10-13 13:51:00] total 407116
[2025-10-13 13:51:00] -rw-r--r-- 1 boincer umatlas    557409 Oct 13 11:15 pilot3.tar.gz
[2025-10-13 13:51:00] -rwx------ 1 boincer umatlas     36292 Oct 13 11:45 runpilot2-wrapper.sh
[2025-10-13 13:51:00] -rw-r--r-- 1 boincer umatlas      5112 Oct 13 11:45 queuedata.json
[2025-10-13 13:51:00] -rw-r--r-- 1 boincer umatlas       100 Oct 13 11:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:51:00] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 11:46 run_atlas
[2025-10-13 13:51:00] -rw-r--r-- 1 boincer umatlas       105 Oct 13 11:46 job.xml
[2025-10-13 13:51:00] -rw-r--r-- 2 boincer umatlas 219666343 Oct 13 11:46 EVNT.46676267._003833.pool.root.1
[2025-10-13 13:51:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 11:46 start_atlas.sh
[2025-10-13 13:51:00] drwxrwx--x 2 boincer umatlas      4096 Oct 13 11:46 shared
[2025-10-13 13:51:00] -rw-r--r-- 2 boincer umatlas    569682 Oct 13 11:46 input.tar.gz
[2025-10-13 13:51:00] -rw-r--r-- 1 boincer umatlas         0 Oct 13 11:46 boinc_lockfile
[2025-10-13 13:51:00] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 11:46 pandaJob.out
[2025-10-13 13:51:00] -rw------- 1 boincer umatlas    972783 Oct 13 11:46 agis_schedconf.cvmfs.json
[2025-10-13 13:51:00] -rw------- 1 boincer umatlas   1560580 Oct 13 11:46 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:51:00] drwx------ 5 boincer umatlas      4096 Oct 13 11:46 pilot3
[2025-10-13 13:51:00] -rw-r--r-- 1 boincer umatlas      5910 Oct 13 13:45 init_data.xml
[2025-10-13 13:51:00] -rw------- 1 boincer umatlas 190499333 Oct 13 13:49 HITS.46676269._096903.pool.root.1
[2025-10-13 13:51:00] -rw-r--r-- 1 boincer umatlas       530 Oct 13 13:49 boinc_task_state.xml
[2025-10-13 13:51:00] -rw------- 1 boincer umatlas      1061 Oct 13 13:49 memory_monitor_summary.json
[2025-10-13 13:51:00] -rw------- 1 boincer umatlas    368917 Oct 13 13:49 log.46676269._096903.job.log.tgz.1
[2025-10-13 13:51:00] -rw------- 1 boincer umatlas      7848 Oct 13 13:50 heartbeat.json
[2025-10-13 13:51:00] -rw-r--r-- 1 boincer umatlas        27 Oct 13 13:50 wrapper_checkpoint.txt
[2025-10-13 13:51:00] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 13:50 boinc_mmap_file
[2025-10-13 13:51:00] -rw------- 1 boincer umatlas        95 Oct 13 13:50 pilot_heartbeat.json
[2025-10-13 13:51:00] -rw------- 1 boincer umatlas      4932 Oct 13 13:51 pilotlog.txt
[2025-10-13 13:51:00] -rw------- 1 boincer umatlas   1043490 Oct 13 13:51 log.46676269._096903.job.log.1
[2025-10-13 13:51:00] -rw------- 1 boincer umatlas       357 Oct 13 13:51 output.list
[2025-10-13 13:51:00] -rw-r--r-- 1 boincer umatlas       620 Oct 13 13:51 runtime_log
[2025-10-13 13:51:00] -rw------- 1 boincer umatlas   1433600 Oct 13 13:51 result.tar.gz
[2025-10-13 13:51:00] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 13:51 runtime_log.err
[2025-10-13 13:51:00] -rw------- 1 boincer umatlas       659 Oct 13 13:51 8TcKDmIvZS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmvkVMDmrfLgym.diag
[2025-10-13 13:51:00] -rw-r--r-- 1 boincer umatlas     21089 Oct 13 13:51 stderr.txt
[2025-10-13 13:51:00] HITS file was successfully produced:
[2025-10-13 13:51:00] -rw------- 1 boincer umatlas 190499333 Oct 13 13:49 shared/HITS.pool.root.1
[2025-10-13 13:51:00]  *** Contents of shared directory: ***
[2025-10-13 13:51:00] total 402532
[2025-10-13 13:51:00] -rw-r--r-- 2 boincer umatlas 219666343 Oct 13 11:46 ATLAS.root_0
[2025-10-13 13:51:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 11:46 start_atlas.sh
[2025-10-13 13:51:00] -rw-r--r-- 2 boincer umatlas    569682 Oct 13 11:46 input.tar.gz
[2025-10-13 13:51:00] -rw------- 1 boincer umatlas 190499333 Oct 13 13:49 HITS.pool.root.1
[2025-10-13 13:51:00] -rw------- 1 boincer umatlas   1433600 Oct 13 13:51 result.tar.gz
13:51:01 (8828): run_atlas exited; CPU time 54783.238154
13:51:01 (8828): called boinc_finish(0)

</stderr_txt>
]]>

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