Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:12:35 (11852): wrapper (7.7.26015): starting
00:12:35 (11852): wrapper: running run_atlas (--nthreads 8)
[2025-10-14 00:12:35] Arguments: --nthreads 8
[2025-10-14 00:12:35] Threads: 8
[2025-10-14 00:12:35] Checking for CVMFS
[2025-10-14 00:12:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 00:12:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 00:12:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 00:12:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 00:12:37] 2.11.2.0 27391 24947 74492 151675 2 17 13684743 25165825 4632 130560 0 7348610 99.939 2017719 1440 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-14 00:12:37] CVMFS is ok
[2025-10-14 00:12:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 00:12:37] Checking for apptainer binary...
[2025-10-14 00:12:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 00:12:37] Running /usr/bin/apptainer --version
[2025-10-14 00:12:37] apptainer version 1.3.2-1.el7
[2025-10-14 00:12:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 00:12:46] cg-vwn417.simple-grid.lan
[2025-10-14 00:12:46] apptainer works
[2025-10-14 00:12:46] Set ATHENA_PROC_NUMBER=8
[2025-10-14 00:12:46] Set ATHENA_CORE_NUMBER=8
[2025-10-14 00:12:46] Starting ATLAS job with PandaID=6838117128
[2025-10-14 00:12:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 04:01:00]  *** The last 200 lines of the pilot log: ***
[2025-10-14 04:01:00] 2025-10-14 01:59:55,760 | INFO     | monitor loop #999: job 0:6838117128 is in state 'finished'
[2025-10-14 04:01:00] 2025-10-14 01:59:55,760 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 04:01:00] 2025-10-14 01:59:56,316 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 04:01:00] 2025-10-14 01:59:56,317 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-10-14 04:01:00] 2025-10-14 01:59:56,319 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6838117128/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 04:01:00] 2025-10-14 01:59:56,320 | INFO     | extracted standard info from prmon json
[2025-10-14 04:01:00] 2025-10-14 01:59:56,320 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 04:01:00] 2025-10-14 01:59:56,320 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 04:01:00] 2025-10-14 01:59:56,320 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 04:01:00] 2025-10-14 01:59:56,320 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 04:01:00] 2025-10-14 01:59:56,328 | INFO     | fitting pss+swap vs Time
[2025-10-14 04:01:00] 2025-10-14 01:59:56,329 | INFO     | sum of square deviations: 2912836010.0
[2025-10-14 04:01:00] 2025-10-14 01:59:56,330 | INFO     | sum of deviations: 12808154749.999992
[2025-10-14 04:01:00] 2025-10-14 01:59:56,330 | INFO     | mean x: 1760400679.0
[2025-10-14 04:01:00] 2025-10-14 01:59:56,331 | INFO     | mean y: 2489183.2085308055
[2025-10-14 04:01:00] 2025-10-14 01:59:56,331 | INFO     | -- intersect: -7738243299.234606
[2025-10-14 04:01:00] 2025-10-14 01:59:56,331 | INFO     | intersect: -7738243299.234606
[2025-10-14 04:01:00] 2025-10-14 01:59:56,331 | INFO     | chi2: 5.021709036203355
[2025-10-14 04:01:00] 2025-10-14 01:59:56,332 | INFO     | sum of square deviations: 2710627567.5
[2025-10-14 04:01:00] 2025-10-14 01:59:56,333 | INFO     | sum of deviations: 26455147919.49997
[2025-10-14 04:01:00] 2025-10-14 01:59:56,333 | INFO     | mean x: 1760400526.5
[2025-10-14 04:01:00] 2025-10-14 01:59:56,333 | INFO     | mean y: 2499275.4417475727
[2025-10-14 04:01:00] 2025-10-14 01:59:56,333 | INFO     | -- intersect: -17178635043.603033
[2025-10-14 04:01:00] 2025-10-14 01:59:56,333 | INFO     | intersect: -17178635043.603033
[2025-10-14 04:01:00] 2025-10-14 01:59:56,334 | INFO     | chi2: 4.298043144918036
[2025-10-14 04:01:00] 2025-10-14 01:59:56,334 | INFO     | current chi2=4.298043144918036 (change=14.41074913078685 %)
[2025-10-14 04:01:00] 2025-10-14 01:59:56,334 | INFO     | right removable region: 205
[2025-10-14 04:01:00] 2025-10-14 01:59:56,334 | INFO     | sum of square deviations: 2710627567.5
[2025-10-14 04:01:00] 2025-10-14 01:59:56,336 | INFO     | sum of deviations: -54071862749.5
[2025-10-14 04:01:00] 2025-10-14 01:59:56,336 | INFO     | mean x: 1760400831.5
[2025-10-14 04:01:00] 2025-10-14 01:59:56,336 | INFO     | mean y: 2539506.354368932
[2025-10-14 04:01:00] 2025-10-14 01:59:56,336 | INFO     | -- intersect: 35119186767.77262
[2025-10-14 04:01:00] 2025-10-14 01:59:56,336 | INFO     | intersect: 35119186767.77262
[2025-10-14 04:01:00] 2025-10-14 01:59:56,336 | INFO     | chi2: 1.1134744962740546
[2025-10-14 04:01:00] 2025-10-14 01:59:56,337 | INFO     | current chi2=1.1134744962740546 (change=77.82678191335647 %)
[2025-10-14 04:01:00] 2025-10-14 01:59:56,337 | INFO     | sum of square deviations: 2518000700.0
[2025-10-14 04:01:00] 2025-10-14 01:59:56,338 | INFO     | sum of deviations: -62631846319.0
[2025-10-14 04:01:00] 2025-10-14 01:59:56,338 | INFO     | mean x: 1760400984.0
[2025-10-14 04:01:00] 2025-10-14 01:59:56,339 | INFO     | mean y: 2546228.527363184
[2025-10-14 04:01:00] 2025-10-14 01:59:56,339 | INFO     | -- intersect: 43790128928.44654
[2025-10-14 04:01:00] 2025-10-14 01:59:56,339 | INFO     | intersect: 43790128928.44654
[2025-10-14 04:01:00] 2025-10-14 01:59:56,339 | INFO     | chi2: 0.9825155911091062
[2025-10-14 04:01:00] 2025-10-14 01:59:56,339 | INFO     | current chi2=0.9825155911091062 (change=11.761284663741055 %)
[2025-10-14 04:01:00] 2025-10-14 01:59:56,339 | INFO     | left removable region: 20
[2025-10-14 04:01:00] 2025-10-14 01:59:56,340 | INFO     | sum of square deviations: 1963274020.0
[2025-10-14 04:01:00] 2025-10-14 01:59:56,341 | INFO     | sum of deviations: -37108373634.0
[2025-10-14 04:01:00] 2025-10-14 01:59:56,341 | INFO     | mean x: 1760401106.0
[2025-10-14 04:01:00] 2025-10-14 01:59:56,341 | INFO     | mean y: 2549005.772972973
[2025-10-14 04:01:00] 2025-10-14 01:59:56,341 | INFO     | -- intersect: 33276366782.445244
[2025-10-14 04:01:00] 2025-10-14 01:59:56,341 | INFO     | intersect: 33276366782.445244
[2025-10-14 04:01:00] 2025-10-14 01:59:56,342 | INFO     | chi2: 0.18574492920974425
[2025-10-14 04:01:00] 2025-10-14 01:59:56,342 | INFO     | -- intersect: 33276366782.445244
[2025-10-14 04:01:00] 2025-10-14 01:59:56,342 | INFO     | current memory leak: -18.90 B/s (using 185 data points, chi2=0.19)
[2025-10-14 04:01:00] 2025-10-14 01:59:56,342 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2025-10-14 04:01:00] 2025-10-14 01:59:56,342 | INFO     | ..............................
[2025-10-14 04:01:00] 2025-10-14 01:59:56,343 | INFO     | . Timing measurements:
[2025-10-14 04:01:00] 2025-10-14 01:59:56,343 | INFO     | . get job = 0 s
[2025-10-14 04:01:00] 2025-10-14 01:59:56,343 | INFO     | . initial setup = 5 s
[2025-10-14 04:01:00] 2025-10-14 01:59:56,343 | INFO     | . payload setup = 141 s
[2025-10-14 04:01:00] 2025-10-14 01:59:56,343 | INFO     | . stage-in = 0 s
[2025-10-14 04:01:00] 2025-10-14 01:59:56,343 | INFO     | . payload execution = 12968 s
[2025-10-14 04:01:00] 2025-10-14 01:59:56,343 | INFO     | . stage-out = 3 s
[2025-10-14 04:01:00] 2025-10-14 01:59:56,343 | INFO     | . log creation = 1 s
[2025-10-14 04:01:00] 2025-10-14 01:59:56,343 | INFO     | ..............................
[2025-10-14 04:01:00] 2025-10-14 01:59:56,441 | INFO     | 
[2025-10-14 04:01:00] 2025-10-14 01:59:56,441 | INFO     | job summary report
[2025-10-14 04:01:00] 2025-10-14 01:59:56,441 | INFO     | --------------------------------------------------
[2025-10-14 04:01:00] 2025-10-14 01:59:56,441 | INFO     | PanDA job id: 6838117128
[2025-10-14 04:01:00] 2025-10-14 01:59:56,441 | INFO     | task id: 46676269
[2025-10-14 04:01:00] 2025-10-14 01:59:56,441 | INFO     | errors: (none)
[2025-10-14 04:01:00] 2025-10-14 01:59:56,441 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 04:01:00] 2025-10-14 01:59:56,442 | INFO     | pilot state: finished 
[2025-10-14 04:01:00] 2025-10-14 01:59:56,442 | INFO     | transexitcode: 0
[2025-10-14 04:01:00] 2025-10-14 01:59:56,442 | INFO     | exeerrorcode: 0
[2025-10-14 04:01:00] 2025-10-14 01:59:56,442 | INFO     | exeerrordiag: 
[2025-10-14 04:01:00] 2025-10-14 01:59:56,442 | INFO     | exitcode: 0
[2025-10-14 04:01:00] 2025-10-14 01:59:56,442 | INFO     | exitmsg: OK
[2025-10-14 04:01:00] 2025-10-14 01:59:56,442 | INFO     | cpuconsumptiontime: 48826 s
[2025-10-14 04:01:00] 2025-10-14 01:59:56,442 | INFO     | nevents: 400
[2025-10-14 04:01:00] 2025-10-14 01:59:56,442 | INFO     | neventsw: 0
[2025-10-14 04:01:00] 2025-10-14 01:59:56,442 | INFO     | pid: 22447
[2025-10-14 04:01:00] 2025-10-14 01:59:56,442 | INFO     | pgrp: 22447
[2025-10-14 04:01:00] 2025-10-14 01:59:56,442 | INFO     | corecount: 8
[2025-10-14 04:01:00] 2025-10-14 01:59:56,442 | INFO     | event service: False
[2025-10-14 04:01:00] 2025-10-14 01:59:56,442 | INFO     | sizes: {0: 2348028, 1: 2348713, 2: 2348912, 12: 2348912, 23: 2348940, 34: 2348968, 45: 2349124, 55: 2349152, 66: 2349180, 77: 2349208, 87: 2349264, 91: 2349834, 98
[2025-10-14 04:01:00] 2025-10-14 01:59:56,442 | INFO     | --------------------------------------------------
[2025-10-14 04:01:00] 2025-10-14 01:59:56,443 | INFO     | 
[2025-10-14 04:01:00] 2025-10-14 01:59:56,443 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-10-14 04:01:00] 2025-10-14 01:59:57,005 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 04:01:00] 2025-10-14 01:59:57,006 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 04:01:00] 2025-10-14 01:59:57,006 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 04:01:00] 2025-10-14 01:59:57,006 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 04:01:00] 2025-10-14 01:59:57,006 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 04:01:00] 2025-10-14 01:59:57,006 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 04:01:00] 2025-10-14 01:59:57,006 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 04:01:00] 2025-10-14 01:59:57,006 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 04:01:00] 2025-10-14 01:59:57,006 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 04:01:00] 2025-10-14 01:59:57,006 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 04:01:00] 2025-10-14 01:59:57,006 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 04:01:00] 2025-10-14 01:59:57,006 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 04:01:00] 2025-10-14 01:59:57,006 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 04:01:00] 2025-10-14 01:59:57,006 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 04:01:00] 2025-10-14 01:59:57,006 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 04:01:00] 2025-10-14 01:59:57,007 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 04:01:00] 2025-10-14 01:59:57,007 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 04:01:00] 2025-10-14 01:59:57,007 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 04:01:00] 2025-10-14 01:59:57,007 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 04:01:00] 2025-10-14 01:59:57,007 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 04:01:00] 2025-10-14 01:59:57,007 | INFO     | job 6838117128 has completed (purged errors)
[2025-10-14 04:01:00] 2025-10-14 01:59:57,007 | INFO     | overall cleanup function is called
[2025-10-14 04:01:00] 2025-10-14 01:59:58,015 | INFO     | --- collectZombieJob: --- 10, [22447]
[2025-10-14 04:01:00] 2025-10-14 01:59:58,015 | INFO     | zombie collector waiting for pid 22447
[2025-10-14 04:01:00] 2025-10-14 01:59:58,015 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 04:01:00] 2025-10-14 01:59:58,015 | INFO     | collected zombie processes
[2025-10-14 04:01:00] 2025-10-14 01:59:58,016 | INFO     | will attempt to kill all subprocesses of pid=22447
[2025-10-14 04:01:00] 2025-10-14 01:59:58,134 | INFO     | process IDs to be killed: [22447] (in reverse order)
[2025-10-14 04:01:00] 2025-10-14 01:59:59,104 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 04:01:00] 2025-10-14 01:59:59,105 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 04:01:00] 2025-10-14 01:59:59,108 | INFO     | did not find any defunct processes belonging to 22447
[2025-10-14 04:01:00] 2025-10-14 01:59:59,111 | INFO     | did not find any defunct processes belonging to 22447
[2025-10-14 04:01:00] 2025-10-14 01:59:59,111 | INFO     | ready for new job
[2025-10-14 04:01:00] 2025-10-14 01:59:59,112 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 04:01:00] 2025-10-14 01:59:59,114 | INFO     | ***************************************
[2025-10-14 04:01:00] 2025-10-14 01:59:59,114 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 04:01:00] 2025-10-14 01:59:59,114 | INFO     | ***************************************
[2025-10-14 04:01:00] 2025-10-14 01:59:59,114 | INFO     | 
[2025-10-14 04:01:00] 2025-10-14 01:59:59,115 | INFO     | pilot is running in a VM
[2025-10-14 04:01:00] 2025-10-14 01:59:59,115 | INFO     | architecture information:
[2025-10-14 04:01:00] 2025-10-14 01:59:59,115 | INFO     | executing command: cat /etc/os-release
[2025-10-14 04:01:00] 2025-10-14 01:59:59,329 | INFO     | cat /etc/os-release:
[2025-10-14 04:01:00] NAME="CentOS Linux"
[2025-10-14 04:01:00] VERSION="7 (Core)"
[2025-10-14 04:01:00] ID="centos"
[2025-10-14 04:01:00] ID_LIKE="rhel fedora"
[2025-10-14 04:01:00] VERSION_ID="7"
[2025-10-14 04:01:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 04:01:00] ANSI_COLOR="0;31"
[2025-10-14 04:01:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 04:01:00] HOME_URL="https://www.centos.org/"
[2025-10-14 04:01:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 04:01:00] 
[2025-10-14 04:01:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 04:01:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 04:01:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 04:01:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 04:01:00] 
[2025-10-14 04:01:00] 2025-10-14 01:59:59,330 | INFO     | ***************************************
[2025-10-14 04:01:00] 2025-10-14 01:59:59,833 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-10-14 04:01:00] 2025-10-14 02:00:00,083 | INFO     | sufficient remaining disk space (495779315712 B)
[2025-10-14 04:01:00] 2025-10-14 02:00:00,084 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 04:01:00] 2025-10-14 02:00:00,084 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 04:01:00] 2025-10-14 02:00:00,084 | INFO     | update_server=False
[2025-10-14 04:01:00] 2025-10-14 02:00:00,084 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 04:01:00] 2025-10-14 02:00:00,084 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 04:01:00] 2025-10-14 02:00:00,084 | INFO     | aborting loop
[2025-10-14 04:01:00] 2025-10-14 02:00:00,917 | INFO     | all payload control threads have been joined
[2025-10-14 04:01:00] 2025-10-14 02:00:00,980 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 04:01:00] 2025-10-14 02:00:01,088 | INFO     | all data control threads have been joined
[2025-10-14 04:01:00] 2025-10-14 02:00:01,089 | INFO     | [job] job monitor thread has finished
[2025-10-14 04:01:00] 2025-10-14 02:00:01,090 | INFO     | [job] retrieve thread has finished
[2025-10-14 04:01:00] 2025-10-14 02:00:01,094 | INFO     | [payload] validate_post thread has finished
[2025-10-14 04:01:00] 2025-10-14 02:00:01,457 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 04:01:00] 2025-10-14 02:00:01,529 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 04:01:00] 2025-10-14 02:00:01,619 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 04:01:00] 2025-10-14 02:00:01,688 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 04:01:00] 2025-10-14 02:00:01,782 | INFO     | all job control threads have been joined
[2025-10-14 04:01:00] 2025-10-14 02:00:01,788 | INFO     | [job] validate thread has finished
[2025-10-14 04:01:00] 2025-10-14 02:00:01,884 | INFO     | [data] copytool_in thread has finished
[2025-10-14 04:01:00] 2025-10-14 02:00:01,923 | INFO     | [payload] control thread has finished
[2025-10-14 04:01:00] 2025-10-14 02:00:02,094 | INFO     | [data] control thread has finished
[2025-10-14 04:01:00] 2025-10-14 02:00:02,107 | INFO     | [payload] failed_post thread has finished
[2025-10-14 04:01:00] 2025-10-14 02:00:02,463 | INFO     | [job] queue monitor thread has finished
[2025-10-14 04:01:00] 2025-10-14 02:00:02,525 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 04:01:00] 2025-10-14 02:00:02,788 | INFO     | [job] control thread has finished
[2025-10-14 04:01:00] 2025-10-14 02:00:02,987 | INFO     | [data] copytool_out thread has finished
[2025-10-14 04:01:00] 2025-10-14 02:00:03,050 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 04:01:00] 2025-10-14 02:00:07,059 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 04:01:00] 2025-10-14 02:00:28,288 | INFO     | PID=15896 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-14 04:01:00] 2025-10-14 02:00:28,288 | INFO     | .. there are 9 such processes running
[2025-10-14 04:01:00] 2025-10-14 02:00:28,290 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 04:01:00] 2025-10-14 02:00:28,290 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 04:01:00] 2025-10-14 02:00:28,290 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 04:01:00] 2025-10-14 02:00:49,965 | INFO     | [monitor] cgroup control has ended
[2025-10-14 04:01:00] 2025-10-14 02:00:50,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140099765180224)>', '<ExcThread(monitor, started 140099299809024)>']
[2025-10-14 04:01:00] 2025-10-14 02:00:51,428 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 04:01:00] 2025-10-14 02:00:51,428 | INFO     | [monitor] control thread has ended
[2025-10-14 04:01:00] 2025-10-14 02:00:55,997 | INFO     | all workflow threads have been joined
[2025-10-14 04:01:00] 2025-10-14 02:00:55,997 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 04:01:00] 2025-10-14 02:00:55,997 | INFO     | traces error code: 0
[2025-10-14 04:01:00] 2025-10-14 02:00:55,997 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 04:01:00] 2025-10-14 02:00:56,331 [wrapper] ==== pilot stdout END ====
[2025-10-14 04:01:00] 2025-10-14 02:00:56,430 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 04:01:00] 2025-10-14 02:00:56,520 [wrapper] pilotpid: 15896
[2025-10-14 04:01:00] 2025-10-14 02:00:56,611 [wrapper] Pilot exit status: 0
[2025-10-14 04:01:00] 2025-10-14 02:00:57,015 [wrapper] pandaids: 6838117128
[2025-10-14 04:01:00] 2025-10-14 02:00:57,708 [wrapper] cleanup supervisor_pilot 13988 15897
[2025-10-14 04:01:00] 2025-10-14 02:00:57,826 [wrapper] Test setup, not cleaning
[2025-10-14 04:01:00] 2025-10-14 02:00:57,933 [wrapper] apfmon messages muted
[2025-10-14 04:01:00] 2025-10-14 02:00:58,023 [wrapper] ==== wrapper stdout END ====
[2025-10-14 04:01:00] 2025-10-14 02:00:58,126 [wrapper] ==== wrapper stderr END ====
[2025-10-14 04:01:00]  *** Error codes and diagnostics ***
[2025-10-14 04:01:00]     "exeErrorCode": 0,
[2025-10-14 04:01:00]     "exeErrorDiag": "",
[2025-10-14 04:01:00]     "pilotErrorCode": 0,
[2025-10-14 04:01:00]     "pilotErrorDiag": "",
[2025-10-14 04:01:00]  *** Listing of results directory ***
[2025-10-14 04:01:00] total 412164
[2025-10-14 04:01:00] -rw-r--r--. 1 boinc boinc    557409 Oct 11 07:13 pilot3.tar.gz
[2025-10-14 04:01:00] -rwx------. 1 boinc boinc     36292 Oct 11 07:18 runpilot2-wrapper.sh
[2025-10-14 04:01:00] -rw-r--r--. 1 boinc boinc      5112 Oct 11 07:18 queuedata.json
[2025-10-14 04:01:00] -rw-r--r--. 1 boinc boinc       100 Oct 14 00:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 04:01:00] -rwxr-xr-x. 1 boinc boinc      7986 Oct 14 00:12 run_atlas
[2025-10-14 04:01:00] -rw-r--r--. 1 boinc boinc       105 Oct 14 00:12 job.xml
[2025-10-14 04:01:00] -rw-r--r--. 1 boinc boinc      6389 Oct 14 00:12 init_data.xml
[2025-10-14 04:01:00] -rw-r--r--. 2 boinc boinc 220140276 Oct 14 00:12 EVNT.46676267._002084.pool.root.1
[2025-10-14 04:01:00] -rw-r--r--. 2 boinc boinc     15120 Oct 14 00:12 start_atlas.sh
[2025-10-14 04:01:00] drwxrwx--x. 2 boinc boinc        68 Oct 14 00:12 shared
[2025-10-14 04:01:00] -rw-r--r--. 2 boinc boinc    569676 Oct 14 00:12 input.tar.gz
[2025-10-14 04:01:00] -rw-r--r--. 1 boinc boinc         0 Oct 14 00:12 boinc_lockfile
[2025-10-14 04:01:00] -rw-r--r--. 1 boinc boinc      2549 Oct 14 00:12 pandaJob.out
[2025-10-14 04:01:00] -rw-------. 1 boinc boinc    972799 Oct 14 00:16 agis_schedconf.cvmfs.json
[2025-10-14 04:01:00] drwx------. 5 boinc boinc      4096 Oct 14 00:16 pilot3
[2025-10-14 04:01:00] -rw-------. 1 boinc boinc 193534847 Oct 14 03:56 HITS.46676269._051858.pool.root.1
[2025-10-14 04:01:00] -rw-r--r--. 1 boinc boinc       531 Oct 14 03:57 boinc_task_state.xml
[2025-10-14 04:01:00] -rw-------. 1 boinc boinc      1025 Oct 14 03:58 memory_monitor_summary.json
[2025-10-14 04:01:00] -rw-------. 1 boinc boinc   1560580 Oct 14 03:58 agis_ddmendpoints.agis.ALL.json
[2025-10-14 04:01:00] -rw-------. 1 boinc boinc    447239 Oct 14 03:58 log.46676269._051858.job.log.tgz.1
[2025-10-14 04:01:00] -rw-------. 1 boinc boinc      7782 Oct 14 03:59 heartbeat.json
[2025-10-14 04:01:00] -rw-------. 1 boinc boinc        95 Oct 14 04:00 pilot_heartbeat.json
[2025-10-14 04:01:00] -rw-r--r--. 1 boinc boinc        28 Oct 14 04:00 wrapper_checkpoint.txt
[2025-10-14 04:01:00] -rw-r--r--. 1 boinc boinc      8192 Oct 14 04:00 boinc_mmap_file
[2025-10-14 04:01:00] -rw-------. 1 boinc boinc      4884 Oct 14 04:00 pilotlog.txt
[2025-10-14 04:01:00] -rw-------. 1 boinc boinc   1798384 Oct 14 04:00 log.46676269._051858.job.log.1
[2025-10-14 04:01:00] -rw-------. 1 boinc boinc       357 Oct 14 04:00 output.list
[2025-10-14 04:01:00] -rw-r--r--. 1 boinc boinc       620 Oct 14 04:01 runtime_log
[2025-10-14 04:01:00] -rw-------. 1 boinc boinc   2263040 Oct 14 04:01 result.tar.gz
[2025-10-14 04:01:00] -rw-------. 1 boinc boinc       657 Oct 14 04:01 wa8KDm1AhR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUUfNDmRl1NYn.diag
[2025-10-14 04:01:00] -rw-r--r--. 1 boinc boinc      8703 Oct 14 04:01 runtime_log.err
[2025-10-14 04:01:00] -rw-r--r--. 1 boinc boinc     20802 Oct 14 04:01 stderr.txt
[2025-10-14 04:01:00] HITS file was successfully produced:
[2025-10-14 04:01:00] -rw-------. 1 boinc boinc 193534847 Oct 14 03:56 shared/HITS.pool.root.1
[2025-10-14 04:01:00]  *** Contents of shared directory: ***
[2025-10-14 04:01:00] total 406772
[2025-10-14 04:01:00] -rw-r--r--. 2 boinc boinc 220140276 Oct 14 00:12 ATLAS.root_0
[2025-10-14 04:01:00] -rw-r--r--. 2 boinc boinc     15120 Oct 14 00:12 start_atlas.sh
[2025-10-14 04:01:00] -rw-r--r--. 2 boinc boinc    569676 Oct 14 00:12 input.tar.gz
[2025-10-14 04:01:00] -rw-------. 1 boinc boinc 193534847 Oct 14 03:56 HITS.pool.root.1
[2025-10-14 04:01:00] -rw-------. 1 boinc boinc   2263040 Oct 14 04:01 result.tar.gz
04:01:02 (11852): run_atlas exited; CPU time 48977.341094
04:01:02 (11852): called boinc_finish(0)

</stderr_txt>
]]>

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