Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:13:55 (3577417): wrapper (7.7.26015): starting
11:13:55 (3577417): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 11:13:55] Arguments: --nthreads 9
[2025-10-13 11:13:55] Threads: 9
[2025-10-13 11:13:55] Checking for CVMFS
[2025-10-13 11:13:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 11:13:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 11:13:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 11:13:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 11:13:57] 2.13.2.0 1094862 130866 855344 151664 3 993 29369602 32935936 34466 16776704 73 409118596 99.729 284025592 19920 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 11:13:57] CVMFS is ok
[2025-10-13 11:13:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 11:13:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 11:13:57] Further information can be found at the LHC@home message board.
[2025-10-13 11:13:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 11:13:57] Checking for apptainer binary...
[2025-10-13 11:13:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 11:13:57] Running /usr/bin/apptainer --version
[2025-10-13 11:13:57] apptainer version 1.4.3-1.el9
[2025-10-13 11:13:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 11:13:58] lc-12-33.aglt2.org
[2025-10-13 11:13:58] apptainer works
[2025-10-13 11:13:58] Set ATHENA_PROC_NUMBER=9
[2025-10-13 11:13:58] Set ATHENA_CORE_NUMBER=9
[2025-10-13 11:13:58] Starting ATLAS job with PandaID=6840961730
[2025-10-13 11:13:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 14:16:41]  *** The last 200 lines of the pilot log: ***
[2025-10-13 14:16:41] 2025-10-13 18:16:04,060 | INFO     | time since job start (10847s) is within the limit (172800.0s)
[2025-10-13 14:16:41] 2025-10-13 18:16:04,912 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 14:16:41] 2025-10-13 18:16:04,919 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2517.8545833333337
[2025-10-13 14:16:41] 2025-10-13 18:16:04,938 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6840961730/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 14:16:41] 2025-10-13 18:16:04,939 | INFO     | extracted standard info from prmon json
[2025-10-13 14:16:41] 2025-10-13 18:16:04,939 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 14:16:41] 2025-10-13 18:16:04,939 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 14:16:41] 2025-10-13 18:16:04,940 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 14:16:41] 2025-10-13 18:16:04,940 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 14:16:41] 2025-10-13 18:16:04,944 | INFO     | fitting pss+swap vs Time
[2025-10-13 14:16:41] 2025-10-13 18:16:04,945 | INFO     | sum of square deviations: 1690408243.977268
[2025-10-13 14:16:41] 2025-10-13 18:16:04,946 | INFO     | sum of deviations: -32544264077.238655
[2025-10-13 14:16:41] 2025-10-13 18:16:04,946 | INFO     | mean x: 1760373999.7613637
[2025-10-13 14:16:41] 2025-10-13 18:16:04,946 | INFO     | mean y: 2225208.4943181816
[2025-10-13 14:16:41] 2025-10-13 18:16:04,947 | INFO     | -- intersect: 33893491727.72522
[2025-10-13 14:16:41] 2025-10-13 18:16:04,947 | INFO     | intersect: 33893491727.72522
[2025-10-13 14:16:41] 2025-10-13 18:16:04,947 | INFO     | chi2: 4.436047651219563
[2025-10-13 14:16:41] 2025-10-13 18:16:04,947 | INFO     | sum of square deviations: 1550390429.1578898
[2025-10-13 14:16:41] 2025-10-13 18:16:04,949 | INFO     | sum of deviations: -17878785145.47369
[2025-10-13 14:16:41] 2025-10-13 18:16:04,949 | INFO     | mean x: 1760373847.2631578
[2025-10-13 14:16:41] 2025-10-13 18:16:04,949 | INFO     | mean y: 2240871.0994152045
[2025-10-13 14:16:41] 2025-10-13 18:16:04,949 | INFO     | -- intersect: 20302511821.57476
[2025-10-13 14:16:41] 2025-10-13 18:16:04,949 | INFO     | intersect: 20302511821.57476
[2025-10-13 14:16:41] 2025-10-13 18:16:04,949 | INFO     | chi2: 3.461084678679135
[2025-10-13 14:16:41] 2025-10-13 18:16:04,950 | INFO     | current chi2=3.461084678679135 (change=21.978189803087215 %)
[2025-10-13 14:16:41] 2025-10-13 18:16:04,950 | INFO     | right removable region: 170
[2025-10-13 14:16:41] 2025-10-13 18:16:04,950 | INFO     | sum of square deviations: 1550372983.6257286
[2025-10-13 14:16:41] 2025-10-13 18:16:04,951 | INFO     | sum of deviations: -71478025030.8772
[2025-10-13 14:16:41] 2025-10-13 18:16:04,951 | INFO     | mean x: 1760374152.2690058
[2025-10-13 14:16:41] 2025-10-13 18:16:04,951 | INFO     | mean y: 2267363.192982456
[2025-10-13 14:16:41] 2025-10-13 18:16:04,951 | INFO     | -- intersect: 81162136019.65627
[2025-10-13 14:16:41] 2025-10-13 18:16:04,952 | INFO     | intersect: 81162136019.65627
[2025-10-13 14:16:41] 2025-10-13 18:16:04,952 | INFO     | chi2: 1.7135787609565987
[2025-10-13 14:16:41] 2025-10-13 18:16:04,952 | INFO     | current chi2=1.7135787609565987 (change=61.371497880878266 %)
[2025-10-13 14:16:41] 2025-10-13 18:16:04,952 | INFO     | sum of square deviations: 1418301547.3012042
[2025-10-13 14:16:41] 2025-10-13 18:16:04,953 | INFO     | sum of deviations: -74609387313.19275
[2025-10-13 14:16:41] 2025-10-13 18:16:04,958 | INFO     | mean x: 1760374304.7710843
[2025-10-13 14:16:41] 2025-10-13 18:16:04,958 | INFO     | mean y: 2270847.626506024
[2025-10-13 14:16:41] 2025-10-13 18:16:04,958 | INFO     | -- intersect: 92606307394.56367
[2025-10-13 14:16:41] 2025-10-13 18:16:04,958 | INFO     | intersect: 92606307394.56367
[2025-10-13 14:16:41] 2025-10-13 18:16:04,958 | INFO     | chi2: 1.5644079606541417
[2025-10-13 14:16:41] 2025-10-13 18:16:04,958 | INFO     | current chi2=1.5644079606541417 (change=8.705219958444337 %)
[2025-10-13 14:16:41] 2025-10-13 18:16:04,959 | INFO     | left removable region: 20
[2025-10-13 14:16:41] 2025-10-13 18:16:04,959 | INFO     | sum of square deviations: 1046423523.7399994
[2025-10-13 14:16:41] 2025-10-13 18:16:04,960 | INFO     | sum of deviations: -44678247107.82001
[2025-10-13 14:16:41] 2025-10-13 18:16:04,960 | INFO     | mean x: 1760374426.78
[2025-10-13 14:16:41] 2025-10-13 18:16:04,960 | INFO     | mean y: 2271065.7933333335
[2025-10-13 14:16:41] 2025-10-13 18:16:04,960 | INFO     | -- intersect: 75163467137.59131
[2025-10-13 14:16:41] 2025-10-13 18:16:04,960 | INFO     | intersect: 75163467137.59131
[2025-10-13 14:16:41] 2025-10-13 18:16:04,960 | INFO     | chi2: 0.4908853404389007
[2025-10-13 14:16:41] 2025-10-13 18:16:04,961 | INFO     | -- intersect: 75163467137.59131
[2025-10-13 14:16:41] 2025-10-13 18:16:04,961 | INFO     | current memory leak: -42.70 B/s (using 150 data points, chi2=0.49)
[2025-10-13 14:16:41] 2025-10-13 18:16:04,961 | INFO     | could have reported an average CPU frequency of 2548 MHz (9 samples)
[2025-10-13 14:16:41] 2025-10-13 18:16:04,962 | INFO     | ..............................
[2025-10-13 14:16:41] 2025-10-13 18:16:04,962 | INFO     | . Timing measurements:
[2025-10-13 14:16:41] 2025-10-13 18:16:04,962 | INFO     | . get job = 0 s
[2025-10-13 14:16:41] 2025-10-13 18:16:04,962 | INFO     | . initial setup = 7 s
[2025-10-13 14:16:41] 2025-10-13 18:16:04,962 | INFO     | . payload setup = 43 s
[2025-10-13 14:16:41] 2025-10-13 18:16:04,962 | INFO     | . stage-in = 0 s
[2025-10-13 14:16:41] 2025-10-13 18:16:04,962 | INFO     | . payload execution = 10707 s
[2025-10-13 14:16:41] 2025-10-13 18:16:04,962 | INFO     | . stage-out = 2 s
[2025-10-13 14:16:41] 2025-10-13 18:16:04,962 | INFO     | . log creation = 0 s
[2025-10-13 14:16:41] 2025-10-13 18:16:04,962 | INFO     | ..............................
[2025-10-13 14:16:41] 2025-10-13 18:16:05,074 | INFO     | 
[2025-10-13 14:16:41] 2025-10-13 18:16:05,075 | INFO     | job summary report
[2025-10-13 14:16:41] 2025-10-13 18:16:05,075 | INFO     | --------------------------------------------------
[2025-10-13 14:16:41] 2025-10-13 18:16:05,075 | INFO     | PanDA job id: 6840961730
[2025-10-13 14:16:41] 2025-10-13 18:16:05,075 | INFO     | task id: 46676269
[2025-10-13 14:16:41] 2025-10-13 18:16:05,075 | INFO     | errors: (none)
[2025-10-13 14:16:41] 2025-10-13 18:16:05,075 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 14:16:41] 2025-10-13 18:16:05,075 | INFO     | pilot state: finished 
[2025-10-13 14:16:41] 2025-10-13 18:16:05,075 | INFO     | transexitcode: 0
[2025-10-13 14:16:41] 2025-10-13 18:16:05,075 | INFO     | exeerrorcode: 0
[2025-10-13 14:16:41] 2025-10-13 18:16:05,076 | INFO     | exeerrordiag: 
[2025-10-13 14:16:41] 2025-10-13 18:16:05,076 | INFO     | exitcode: 0
[2025-10-13 14:16:41] 2025-10-13 18:16:05,076 | INFO     | exitmsg: OK
[2025-10-13 14:16:41] 2025-10-13 18:16:05,076 | INFO     | cpuconsumptiontime: 44176 s
[2025-10-13 14:16:41] 2025-10-13 18:16:05,076 | INFO     | nevents: 400
[2025-10-13 14:16:41] 2025-10-13 18:16:05,076 | INFO     | neventsw: 0
[2025-10-13 14:16:41] 2025-10-13 18:16:05,076 | INFO     | pid: 3601603
[2025-10-13 14:16:41] 2025-10-13 18:16:05,076 | INFO     | pgrp: 3601603
[2025-10-13 14:16:41] 2025-10-13 18:16:05,076 | INFO     | corecount: 9
[2025-10-13 14:16:41] 2025-10-13 18:16:05,076 | INFO     | event service: False
[2025-10-13 14:16:41] 2025-10-13 18:16:05,076 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348913, 13: 2348913, 24: 2348969, 35: 2349415, 10755: 2378252, 10756: 2378251, 10758: 2387305, 10761: 2387361, 10780: 2387619}
[2025-10-13 14:16:41] 2025-10-13 18:16:05,076 | INFO     | --------------------------------------------------
[2025-10-13 14:16:41] 2025-10-13 18:16:05,076 | INFO     | 
[2025-10-13 14:16:41] 2025-10-13 18:16:05,077 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 14:16:41] 2025-10-13 18:16:05,111 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 14:16:41] 2025-10-13 18:16:05,111 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 14:16:41] 2025-10-13 18:16:05,111 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 14:16:41] 2025-10-13 18:16:05,111 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 14:16:41] 2025-10-13 18:16:05,111 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 14:16:41] 2025-10-13 18:16:05,111 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 14:16:41] 2025-10-13 18:16:05,111 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 14:16:41] 2025-10-13 18:16:05,112 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 14:16:41] 2025-10-13 18:16:05,112 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 14:16:41] 2025-10-13 18:16:05,112 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 14:16:41] 2025-10-13 18:16:05,112 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 14:16:41] 2025-10-13 18:16:05,112 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 14:16:41] 2025-10-13 18:16:05,112 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 14:16:41] 2025-10-13 18:16:05,112 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 14:16:41] 2025-10-13 18:16:05,112 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 14:16:41] 2025-10-13 18:16:05,112 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 14:16:41] 2025-10-13 18:16:05,112 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 14:16:41] 2025-10-13 18:16:05,112 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 14:16:41] 2025-10-13 18:16:05,112 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 14:16:41] 2025-10-13 18:16:05,112 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 14:16:41] 2025-10-13 18:16:05,113 | INFO     | job 6840961730 has completed (purged errors)
[2025-10-13 14:16:41] 2025-10-13 18:16:05,113 | INFO     | overall cleanup function is called
[2025-10-13 14:16:41] 2025-10-13 18:16:06,121 | INFO     | --- collectZombieJob: --- 10, [3601603]
[2025-10-13 14:16:41] 2025-10-13 18:16:06,122 | INFO     | zombie collector waiting for pid 3601603
[2025-10-13 14:16:41] 2025-10-13 18:16:06,122 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 14:16:41] 2025-10-13 18:16:06,122 | INFO     | collected zombie processes
[2025-10-13 14:16:41] 2025-10-13 18:16:06,122 | INFO     | will attempt to kill all subprocesses of pid=3601603
[2025-10-13 14:16:41] 2025-10-13 18:16:06,886 | INFO     | process IDs to be killed: [3601603] (in reverse order)
[2025-10-13 14:16:41] 2025-10-13 18:16:07,318 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 14:16:41] 2025-10-13 18:16:07,319 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 14:16:41] 2025-10-13 18:16:07,351 | INFO     | did not find any defunct processes belonging to 3601603
[2025-10-13 14:16:41] 2025-10-13 18:16:07,378 | INFO     | did not find any defunct processes belonging to 3601603
[2025-10-13 14:16:41] 2025-10-13 18:16:07,379 | INFO     | ready for new job
[2025-10-13 14:16:41] 2025-10-13 18:16:07,379 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 14:16:41] 2025-10-13 18:16:07,381 | INFO     | ***************************************
[2025-10-13 14:16:41] 2025-10-13 18:16:07,381 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 14:16:41] 2025-10-13 18:16:07,381 | INFO     | ***************************************
[2025-10-13 14:16:41] 2025-10-13 18:16:07,381 | INFO     | 
[2025-10-13 14:16:41] 2025-10-13 18:16:07,387 | INFO     | architecture information:
[2025-10-13 14:16:41] 2025-10-13 18:16:07,387 | INFO     | executing command: cat /etc/os-release
[2025-10-13 14:16:41] 2025-10-13 18:16:07,407 | INFO     | cat /etc/os-release:
[2025-10-13 14:16:41] NAME="CentOS Linux"
[2025-10-13 14:16:41] VERSION="7 (Core)"
[2025-10-13 14:16:41] ID="centos"
[2025-10-13 14:16:41] ID_LIKE="rhel fedora"
[2025-10-13 14:16:41] VERSION_ID="7"
[2025-10-13 14:16:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 14:16:41] ANSI_COLOR="0;31"
[2025-10-13 14:16:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 14:16:41] HOME_URL="https://www.centos.org/"
[2025-10-13 14:16:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 14:16:41] 
[2025-10-13 14:16:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 14:16:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 14:16:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 14:16:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 14:16:41] 
[2025-10-13 14:16:41] 2025-10-13 18:16:07,407 | INFO     | ***************************************
[2025-10-13 14:16:41] 2025-10-13 18:16:07,910 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 14:16:41] 2025-10-13 18:16:07,952 | INFO     | sufficient remaining disk space (76102500352 B)
[2025-10-13 14:16:41] 2025-10-13 18:16:07,954 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 14:16:41] 2025-10-13 18:16:07,954 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 14:16:41] 2025-10-13 18:16:07,954 | INFO     | update_server=False
[2025-10-13 14:16:41] 2025-10-13 18:16:07,954 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 14:16:41] 2025-10-13 18:16:08,257 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 14:16:41] 2025-10-13 18:16:08,258 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 14:16:41] 2025-10-13 18:16:08,262 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:16:41] 2025-10-13 18:16:08,262 | INFO     | will abort loop
[2025-10-13 14:16:41] 2025-10-13 18:16:08,315 | INFO     | all payload control threads have been joined
[2025-10-13 14:16:41] 2025-10-13 18:16:08,505 | INFO     | all data control threads have been joined
[2025-10-13 14:16:41] 2025-10-13 18:16:08,961 | INFO     | [job] retrieve thread has finished
[2025-10-13 14:16:41] 2025-10-13 18:16:08,969 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 14:16:41] 2025-10-13 18:16:09,074 | INFO     | [payload] failed_post thread has finished
[2025-10-13 14:16:41] 2025-10-13 18:16:09,147 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 14:16:41] 2025-10-13 18:16:09,268 | INFO     | [job] job monitor thread has finished
[2025-10-13 14:16:41] 2025-10-13 18:16:09,322 | INFO     | [payload] control thread has finished
[2025-10-13 14:16:41] 2025-10-13 18:16:09,412 | INFO     | [data] copytool_in thread has finished
[2025-10-13 14:16:41] 2025-10-13 18:16:09,450 | INFO     | [payload] validate_post thread has finished
[2025-10-13 14:16:41] 2025-10-13 18:16:09,513 | INFO     | [data] control thread has finished
[2025-10-13 14:16:41] 2025-10-13 18:16:09,660 | INFO     | all job control threads have been joined
[2025-10-13 14:16:41] 2025-10-13 18:16:09,690 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 14:16:41] 2025-10-13 18:16:10,029 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 14:16:41] 2025-10-13 18:16:10,075 | INFO     | [job] validate thread has finished
[2025-10-13 14:16:41] 2025-10-13 18:16:10,088 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:16:41] 2025-10-13 18:16:10,117 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 14:16:41] 2025-10-13 18:16:10,299 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 14:16:41] 2025-10-13 18:16:10,667 | INFO     | [job] control thread has finished
[2025-10-13 14:16:41] 2025-10-13 18:16:11,095 | INFO     | [job] queue monitor thread has finished
[2025-10-13 14:16:41] 2025-10-13 18:16:11,154 | INFO     | [data] copytool_out thread has finished
[2025-10-13 14:16:41] 2025-10-13 18:16:14,309 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 14:16:41] 2025-10-13 18:16:35,963 | INFO     | [monitor] cgroup control has ended
[2025-10-13 14:16:41] 2025-10-13 18:16:36,100 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140538091337536)>', '<ExcThread(monitor, started 140537277433600)>']
[2025-10-13 14:16:41] 2025-10-13 18:16:38,123 | INFO     | PID=3588411 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 14:16:41] 2025-10-13 18:16:38,124 | INFO     | .. there are 52 such processes running
[2025-10-13 14:16:41] 2025-10-13 18:16:38,125 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 14:16:41] 2025-10-13 18:16:38,125 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 14:16:41] 2025-10-13 18:16:38,125 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 14:16:41] 2025-10-13 18:16:38,125 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 14:16:41] 2025-10-13 18:16:38,126 | INFO     | [monitor] control thread has ended
[2025-10-13 14:16:41] 2025-10-13 18:16:41,125 | INFO     | all workflow threads have been joined
[2025-10-13 14:16:41] 2025-10-13 18:16:41,126 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 14:16:41] 2025-10-13 18:16:41,127 | INFO     | traces error code: 0
[2025-10-13 14:16:41] 2025-10-13 18:16:41,128 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 14:16:41] 2025-10-13 18:16:41,456 [wrapper] ==== pilot stdout END ====
[2025-10-13 14:16:41] 2025-10-13 18:16:41,472 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 14:16:41] 2025-10-13 18:16:41,505 [wrapper] pilotpid: 3588411
[2025-10-13 14:16:41] 2025-10-13 18:16:41,508 [wrapper] Pilot exit status: 0
[2025-10-13 14:16:41] 2025-10-13 18:16:41,594 [wrapper] pandaids: 6840961730
[2025-10-13 14:16:41] 2025-10-13 18:16:41,740 [wrapper] cleanup supervisor_pilot  769496 3588412
[2025-10-13 14:16:41] 2025-10-13 18:16:41,745 [wrapper] Test setup, not cleaning
[2025-10-13 14:16:41] 2025-10-13 18:16:41,748 [wrapper] apfmon messages muted
[2025-10-13 14:16:41] 2025-10-13 18:16:41,751 [wrapper] ==== wrapper stdout END ====
[2025-10-13 14:16:41] 2025-10-13 18:16:41,754 [wrapper] ==== wrapper stderr END ====
[2025-10-13 14:16:41]  *** Error codes and diagnostics ***
[2025-10-13 14:16:41]     "exeErrorCode": 0,
[2025-10-13 14:16:41]     "exeErrorDiag": "",
[2025-10-13 14:16:41]     "pilotErrorCode": 0,
[2025-10-13 14:16:41]     "pilotErrorDiag": "",
[2025-10-13 14:16:41]  *** Listing of results directory ***
[2025-10-13 14:16:41] total 403516
[2025-10-13 14:16:41] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:11 pilot3.tar.gz
[2025-10-13 14:16:41] -rwx------. 1 boincer umatlas     36292 Oct 12 19:13 runpilot2-wrapper.sh
[2025-10-13 14:16:41] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:13 queuedata.json
[2025-10-13 14:16:41] -rw-r--r--. 1 boincer umatlas       100 Oct 13 11:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 14:16:41] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 11:13 run_atlas
[2025-10-13 14:16:41] -rw-r--r--. 1 boincer umatlas       105 Oct 13 11:13 job.xml
[2025-10-13 14:16:41] -rw-r--r--. 2 boincer umatlas 219689448 Oct 13 11:13 EVNT.46676267._004649.pool.root.1
[2025-10-13 14:16:41] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 11:13 shared
[2025-10-13 14:16:41] -rw-r--r--. 2 boincer umatlas    569677 Oct 13 11:13 input.tar.gz
[2025-10-13 14:16:41] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 11:13 start_atlas.sh
[2025-10-13 14:16:41] -rw-r--r--. 1 boincer umatlas         0 Oct 13 11:13 boinc_lockfile
[2025-10-13 14:16:41] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 11:13 pandaJob.out
[2025-10-13 14:16:41] -rw-------. 1 boincer umatlas    972791 Oct 13 11:15 agis_schedconf.cvmfs.json
[2025-10-13 14:16:41] drwx------. 5 boincer umatlas      4096 Oct 13 11:15 pilot3
[2025-10-13 14:16:41] -rw-r--r--. 1 boincer umatlas      6878 Oct 13 14:12 init_data.xml
[2025-10-13 14:16:41] -rw-------. 1 boincer umatlas 186099617 Oct 13 14:14 HITS.46676269._091989.pool.root.1
[2025-10-13 14:16:41] -rw-r--r--. 1 boincer umatlas       531 Oct 13 14:15 boinc_task_state.xml
[2025-10-13 14:16:41] -rw-------. 1 boincer umatlas      1044 Oct 13 14:15 memory_monitor_summary.json
[2025-10-13 14:16:41] -rw-------. 1 boincer umatlas   1560580 Oct 13 14:15 agis_ddmendpoints.agis.ALL.json
[2025-10-13 14:16:41] -rw-------. 1 boincer umatlas    426348 Oct 13 14:15 log.46676269._091989.job.log.tgz.1
[2025-10-13 14:16:41] -rw-------. 1 boincer umatlas      7837 Oct 13 14:16 heartbeat.json
[2025-10-13 14:16:41] -rw-r--r--. 1 boincer umatlas        28 Oct 13 14:16 wrapper_checkpoint.txt
[2025-10-13 14:16:41] -rw-------. 1 boincer umatlas        95 Oct 13 14:16 pilot_heartbeat.json
[2025-10-13 14:16:41] -rw-------. 1 boincer umatlas      5010 Oct 13 14:16 pilotlog.txt
[2025-10-13 14:16:41] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 14:16 boinc_mmap_file
[2025-10-13 14:16:41] -rw-------. 1 boincer umatlas   1325843 Oct 13 14:16 log.46676269._091989.job.log.1
[2025-10-13 14:16:41] -rw-------. 1 boincer umatlas       357 Oct 13 14:16 output.list
[2025-10-13 14:16:41] -rw-r--r--. 1 boincer umatlas       620 Oct 13 14:16 runtime_log
[2025-10-13 14:16:41] -rw-------. 1 boincer umatlas   1771520 Oct 13 14:16 result.tar.gz
[2025-10-13 14:16:41] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 14:16 runtime_log.err
[2025-10-13 14:16:41] -rw-------. 1 boincer umatlas       655 Oct 13 14:16 1zLODmFRKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQ0lNDmdqx5Dn.diag
[2025-10-13 14:16:41] -rw-r--r--. 1 boincer umatlas     21218 Oct 13 14:16 stderr.txt
[2025-10-13 14:16:41] HITS file was successfully produced:
[2025-10-13 14:16:41] -rw-------. 1 boincer umatlas 186099617 Oct 13 14:14 shared/HITS.pool.root.1
[2025-10-13 14:16:41]  *** Contents of shared directory: ***
[2025-10-13 14:16:41] total 398600
[2025-10-13 14:16:41] -rw-r--r--. 2 boincer umatlas 219689448 Oct 13 11:13 ATLAS.root_0
[2025-10-13 14:16:41] -rw-r--r--. 2 boincer umatlas    569677 Oct 13 11:13 input.tar.gz
[2025-10-13 14:16:41] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 11:13 start_atlas.sh
[2025-10-13 14:16:41] -rw-------. 1 boincer umatlas 186099617 Oct 13 14:14 HITS.pool.root.1
[2025-10-13 14:16:41] -rw-------. 1 boincer umatlas   1771520 Oct 13 14:16 result.tar.gz
14:17:03 (3577417): run_atlas exited; CPU time 44759.743656
14:17:03 (3577417): called boinc_finish(0)

</stderr_txt>
]]>

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