Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:04:18 (8687): wrapper (7.7.26015): starting
11:04:18 (8687): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 11:04:18] Arguments: --nthreads 12
[2025-10-13 11:04:18] Threads: 12
[2025-10-13 11:04:18] Checking for CVMFS
[2025-10-13 11:04:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 11:04:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 11:04:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 11:04:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 11:04:18] 2.11.2.0 2925 224478 98548 151664 3 1 12772186 20275201 1 130560 1 109633012 99.985 12946190 12209 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 11:04:18] CVMFS is ok
[2025-10-13 11:04:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 11:04:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 11:04:18] Further information can be found at the LHC@home message board.
[2025-10-13 11:04:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 11:04:18] Checking for apptainer binary...
[2025-10-13 11:04:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 11:04:18] Running /usr/bin/apptainer --version
[2025-10-13 11:04:18] apptainer version 1.3.2-1.el7
[2025-10-13 11:04:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 11:04:20] c-205-10.aglt2.org
[2025-10-13 11:04:20] apptainer works
[2025-10-13 11:04:20] Set ATHENA_PROC_NUMBER=12
[2025-10-13 11:04:20] Set ATHENA_CORE_NUMBER=12
[2025-10-13 11:04:20] Starting ATLAS job with PandaID=6839221025
[2025-10-13 11:04:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:16:06]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:16:06]  status=None
[2025-10-13 12:16:06]  status_code=0
[2025-10-13 12:16:06]  storage_token=
[2025-10-13 12:16:06]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839221025/log.46676269._068351.job.log.tgz.1
[2025-10-13 12:16:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/4f/log.46676269._068351.job.log.tgz.1
[2025-10-13 12:16:06]  workdir=None
[2025-10-13 12:16:06] ]
[2025-10-13 12:16:06] 2025-10-13 16:15:26,521 | INFO     | transferring file log.46676269._068351.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839221025/log.46676269._068351.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 12:16:06] 2025-10-13 16:15:26,521 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839221025/log.46676269._068351.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._068351.job
[2025-10-13 12:16:06] 2025-10-13 16:15:26,544 | INFO     | adding to output.list: log.46676269._068351.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/4f/log.46676269._068351.job.log.tg
[2025-10-13 12:16:06] 2025-10-13 16:15:26,545 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 12:16:06] 2025-10-13 16:15:26,545 | INFO     | summary of transferred files:
[2025-10-13 12:16:06] 2025-10-13 16:15:26,545 | INFO     |  -- lfn=log.46676269._068351.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 12:16:06] 2025-10-13 16:15:26,545 | INFO     | stage-out finished correctly
[2025-10-13 12:16:06] 2025-10-13 16:15:26,629 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 12:16:06] 2025-10-13 16:15:27,187 | INFO     | time since job start (4251s) is within the limit (172800.0s)
[2025-10-13 12:16:06] 2025-10-13 16:15:29,193 | INFO     | time since job start (4253s) is within the limit (172800.0s)
[2025-10-13 12:16:06] 2025-10-13 16:15:29,629 | INFO     | job 6839221025 has state=finished
[2025-10-13 12:16:06] 2025-10-13 16:15:29,629 | INFO     | preparing for final server update for job 6839221025 in state='finished'
[2025-10-13 12:16:06] 2025-10-13 16:15:29,630 | INFO     | this job has now completed (state=finished)
[2025-10-13 12:16:06] 2025-10-13 16:15:29,630 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 12:16:06] 2025-10-13 16:15:29,630 | INFO     | log transfer has been attempted: DONE
[2025-10-13 12:16:06] 2025-10-13 16:15:29,630 | INFO     | job 6839221025 has finished - writing final server update
[2025-10-13 12:16:06] 2025-10-13 16:15:29,630 | INFO     | total number of processed events: 400 (read)
[2025-10-13 12:16:06] 2025-10-13 16:15:29,631 | INFO     | executing command: lscpu
[2025-10-13 12:16:06] 2025-10-13 16:15:29,657 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 12:16:06] 2025-10-13 16:15:30,145 | WARNING  | process 18718 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 12:16:06] 2025-10-13 16:15:30,146 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839221025/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 12:16:06] 2025-10-13 16:15:30,234 | INFO     | number of running child processes to parent process 18718: 1
[2025-10-13 12:16:06] 2025-10-13 16:15:30,234 | INFO     | maximum number of monitored processes: 6
[2025-10-13 12:16:06] 2025-10-13 16:15:31,199 | INFO     | time since job start (4255s) is within the limit (172800.0s)
[2025-10-13 12:16:06] 2025-10-13 16:15:32,737 | INFO     | monitor loop #318: job 0:6839221025 is in state 'finished'
[2025-10-13 12:16:06] 2025-10-13 16:15:32,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 12:16:06] 2025-10-13 16:15:33,204 | INFO     | time since job start (4257s) is within the limit (172800.0s)
[2025-10-13 12:16:06] 2025-10-13 16:15:33,205 | INFO     | 4260s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 12:16:06] 2025-10-13 16:15:34,324 | INFO     | PID=12362 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 12:16:06] 2025-10-13 16:15:34,403 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 12:16:06] 2025-10-13 16:15:34,406 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1740.1666666666667
[2025-10-13 12:16:06] 2025-10-13 16:15:34,408 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839221025/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 12:16:06] 2025-10-13 16:15:34,409 | INFO     | extracted standard info from prmon json
[2025-10-13 12:16:06] 2025-10-13 16:15:34,409 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 12:16:06] 2025-10-13 16:15:34,409 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 12:16:06] 2025-10-13 16:15:34,409 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 12:16:06] 2025-10-13 16:15:34,409 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 12:16:06] 2025-10-13 16:15:34,410 | INFO     | fitting pss+swap vs Time
[2025-10-13 12:16:06] 2025-10-13 16:15:34,411 | INFO     | sum of square deviations: 77515872.0
[2025-10-13 12:16:06] 2025-10-13 16:15:34,411 | INFO     | sum of deviations: -2029197939.9999998
[2025-10-13 12:16:06] 2025-10-13 16:15:34,411 | INFO     | mean x: 1760370101.0
[2025-10-13 12:16:06] 2025-10-13 16:15:34,411 | INFO     | mean y: 2687809.8412698414
[2025-10-13 12:16:06] 2025-10-13 16:15:34,411 | INFO     | -- intersect: 46085371141.93088
[2025-10-13 12:16:06] 2025-10-13 16:15:34,412 | INFO     | intersect: 46085371141.93088
[2025-10-13 12:16:06] 2025-10-13 16:15:34,412 | INFO     | chi2: 0.033819924328396714
[2025-10-13 12:16:06] 2025-10-13 16:15:34,412 | INFO     | -- intersect: 46085371141.93088
[2025-10-13 12:16:06] 2025-10-13 16:15:34,412 | INFO     | current memory leak: -26.18 B/s (using 63 data points, chi2=0.03)
[2025-10-13 12:16:06] 2025-10-13 16:15:34,412 | INFO     | could have reported an average CPU frequency of 2043 MHz (6 samples)
[2025-10-13 12:16:06] 2025-10-13 16:15:34,412 | INFO     | ..............................
[2025-10-13 12:16:06] 2025-10-13 16:15:34,413 | INFO     | . Timing measurements:
[2025-10-13 12:16:06] 2025-10-13 16:15:34,413 | INFO     | . get job = 0 s
[2025-10-13 12:16:06] 2025-10-13 16:15:34,413 | INFO     | . initial setup = 2 s
[2025-10-13 12:16:06] 2025-10-13 16:15:34,413 | INFO     | . payload setup = 7 s
[2025-10-13 12:16:06] 2025-10-13 16:15:34,413 | INFO     | . stage-in = 0 s
[2025-10-13 12:16:06] 2025-10-13 16:15:34,413 | INFO     | . payload execution = 4222 s
[2025-10-13 12:16:06] 2025-10-13 16:15:34,413 | INFO     | . stage-out = 0 s
[2025-10-13 12:16:06] 2025-10-13 16:15:34,413 | INFO     | . log creation = 0 s
[2025-10-13 12:16:06] 2025-10-13 16:15:34,413 | INFO     | ..............................
[2025-10-13 12:16:06] 2025-10-13 16:15:34,495 | INFO     | 
[2025-10-13 12:16:06] 2025-10-13 16:15:34,495 | INFO     | job summary report
[2025-10-13 12:16:06] 2025-10-13 16:15:34,495 | INFO     | --------------------------------------------------
[2025-10-13 12:16:06] 2025-10-13 16:15:34,495 | INFO     | PanDA job id: 6839221025
[2025-10-13 12:16:06] 2025-10-13 16:15:34,496 | INFO     | task id: 46676269
[2025-10-13 12:16:06] 2025-10-13 16:15:34,496 | INFO     | errors: (none)
[2025-10-13 12:16:06] 2025-10-13 16:15:34,496 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 12:16:06] 2025-10-13 16:15:34,496 | INFO     | pilot state: finished 
[2025-10-13 12:16:06] 2025-10-13 16:15:34,496 | INFO     | transexitcode: 0
[2025-10-13 12:16:06] 2025-10-13 16:15:34,496 | INFO     | exeerrorcode: 0
[2025-10-13 12:16:06] 2025-10-13 16:15:34,496 | INFO     | exeerrordiag: 
[2025-10-13 12:16:06] 2025-10-13 16:15:34,497 | INFO     | exitcode: 0
[2025-10-13 12:16:06] 2025-10-13 16:15:34,497 | INFO     | exitmsg: OK
[2025-10-13 12:16:06] 2025-10-13 16:15:34,497 | INFO     | cpuconsumptiontime: 45505 s
[2025-10-13 12:16:06] 2025-10-13 16:15:34,497 | INFO     | nevents: 400
[2025-10-13 12:16:06] 2025-10-13 16:15:34,497 | INFO     | neventsw: 0
[2025-10-13 12:16:06] 2025-10-13 16:15:34,497 | INFO     | pid: 18718
[2025-10-13 12:16:06] 2025-10-13 16:15:34,497 | INFO     | pgrp: 18718
[2025-10-13 12:16:06] 2025-10-13 16:15:34,498 | INFO     | corecount: 12
[2025-10-13 12:16:06] 2025-10-13 16:15:34,498 | INFO     | event service: False
[2025-10-13 12:16:06] 2025-10-13 16:15:34,498 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 4234: 2375072, 4235: 2384254, 4243: 2384392}
[2025-10-13 12:16:06] 2025-10-13 16:15:34,498 | INFO     | --------------------------------------------------
[2025-10-13 12:16:06] 2025-10-13 16:15:34,498 | INFO     | 
[2025-10-13 12:16:06] 2025-10-13 16:15:34,498 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 12:16:06] 2025-10-13 16:15:34,523 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 12:16:06] 2025-10-13 16:15:34,524 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 12:16:06] 2025-10-13 16:15:34,524 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 12:16:06] 2025-10-13 16:15:34,524 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 12:16:06] 2025-10-13 16:15:34,524 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 12:16:06] 2025-10-13 16:15:34,524 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 12:16:06] 2025-10-13 16:15:34,524 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 12:16:06] 2025-10-13 16:15:34,525 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 12:16:06] 2025-10-13 16:15:34,525 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 12:16:06] 2025-10-13 16:15:34,525 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 12:16:06] 2025-10-13 16:15:34,525 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 12:16:06] 2025-10-13 16:15:34,525 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 12:16:06] 2025-10-13 16:15:34,525 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 12:16:06] 2025-10-13 16:15:34,526 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 12:16:06] 2025-10-13 16:15:34,526 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 12:16:06] 2025-10-13 16:15:34,526 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 12:16:06] 2025-10-13 16:15:34,526 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 12:16:06] 2025-10-13 16:15:34,526 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 12:16:06] 2025-10-13 16:15:34,526 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 12:16:06] 2025-10-13 16:15:34,527 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 12:16:06] 2025-10-13 16:15:34,527 | INFO     | job 6839221025 has completed (purged errors)
[2025-10-13 12:16:06] 2025-10-13 16:15:34,527 | INFO     | overall cleanup function is called
[2025-10-13 12:16:06] 2025-10-13 16:15:35,535 | INFO     | --- collectZombieJob: --- 10, [18718]
[2025-10-13 12:16:06] 2025-10-13 16:15:35,535 | INFO     | zombie collector waiting for pid 18718
[2025-10-13 12:16:06] 2025-10-13 16:15:35,535 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 12:16:06] 2025-10-13 16:15:35,535 | INFO     | collected zombie processes
[2025-10-13 12:16:06] 2025-10-13 16:15:35,535 | INFO     | will attempt to kill all subprocesses of pid=18718
[2025-10-13 12:16:06] 2025-10-13 16:15:35,629 | INFO     | process IDs to be killed: [18718] (in reverse order)
[2025-10-13 12:16:06] 2025-10-13 16:15:35,729 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 12:16:06] 2025-10-13 16:15:35,729 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 12:16:06] 2025-10-13 16:15:35,733 | INFO     | did not find any defunct processes belonging to 18718
[2025-10-13 12:16:06] 2025-10-13 16:15:35,736 | INFO     | did not find any defunct processes belonging to 18718
[2025-10-13 12:16:06] 2025-10-13 16:15:35,736 | INFO     | ready for new job
[2025-10-13 12:16:06] 2025-10-13 16:15:35,737 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 12:16:06] 2025-10-13 16:15:35,738 | INFO     | ***************************************
[2025-10-13 12:16:06] 2025-10-13 16:15:35,738 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 12:16:06] 2025-10-13 16:15:35,738 | INFO     | ***************************************
[2025-10-13 12:16:06] 2025-10-13 16:15:35,738 | INFO     | 
[2025-10-13 12:16:06] 2025-10-13 16:15:35,739 | INFO     | architecture information:
[2025-10-13 12:16:06] 2025-10-13 16:15:35,739 | INFO     | executing command: cat /etc/os-release
[2025-10-13 12:16:06] 2025-10-13 16:15:35,754 | INFO     | cat /etc/os-release:
[2025-10-13 12:16:06] NAME="CentOS Linux"
[2025-10-13 12:16:06] VERSION="7 (Core)"
[2025-10-13 12:16:06] ID="centos"
[2025-10-13 12:16:06] ID_LIKE="rhel fedora"
[2025-10-13 12:16:06] VERSION_ID="7"
[2025-10-13 12:16:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:16:06] ANSI_COLOR="0;31"
[2025-10-13 12:16:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:16:06] HOME_URL="https://www.centos.org/"
[2025-10-13 12:16:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:16:06] 
[2025-10-13 12:16:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:16:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:16:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:16:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:16:06] 
[2025-10-13 12:16:06] 2025-10-13 16:15:35,755 | INFO     | ***************************************
[2025-10-13 12:16:06] 2025-10-13 16:15:36,258 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 12:16:06] 2025-10-13 16:15:36,274 | INFO     | sufficient remaining disk space (29370613760 B)
[2025-10-13 12:16:06] 2025-10-13 16:15:36,274 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:16:06] 2025-10-13 16:15:36,275 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:16:06] 2025-10-13 16:15:36,275 | INFO     | update_server=False
[2025-10-13 12:16:06] 2025-10-13 16:15:36,275 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:16:06] 2025-10-13 16:15:36,275 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:16:06] 2025-10-13 16:15:36,275 | INFO     | aborting loop
[2025-10-13 12:16:06] 2025-10-13 16:15:36,275 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:16:06] 2025-10-13 16:15:36,722 | INFO     | all job control threads have been joined
[2025-10-13 12:16:06] 2025-10-13 16:15:36,815 | INFO     | all data control threads have been joined
[2025-10-13 12:16:06] 2025-10-13 16:15:37,146 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:16:06] 2025-10-13 16:15:37,220 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:16:06] 2025-10-13 16:15:37,280 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:16:06] 2025-10-13 16:15:37,281 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:16:06] 2025-10-13 16:15:37,282 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:16:06] 2025-10-13 16:15:37,426 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:16:06] 2025-10-13 16:15:37,504 | INFO     | all payload control threads have been joined
[2025-10-13 12:16:06] 2025-10-13 16:15:37,728 | INFO     | [job] control thread has finished
[2025-10-13 12:16:06] 2025-10-13 16:15:37,820 | INFO     | [data] control thread has finished
[2025-10-13 12:16:06] 2025-10-13 16:15:37,986 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:16:06] 2025-10-13 16:15:38,074 | INFO     | [job] validate thread has finished
[2025-10-13 12:16:06] 2025-10-13 16:15:38,215 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:16:06] 2025-10-13 16:15:38,458 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:16:06] 2025-10-13 16:15:38,509 | INFO     | [payload] control thread has finished
[2025-10-13 12:16:06] 2025-10-13 16:15:38,547 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:16:06] 2025-10-13 16:15:38,706 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:16:06] 2025-10-13 16:15:39,151 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:16:06] 2025-10-13 16:15:41,226 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:16:06] 2025-10-13 16:15:42,089 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:16:06] 2025-10-13 16:15:47,285 | INFO     | job.realtimelogging is not enabled
[2025-10-13 12:16:06] 2025-10-13 16:15:48,290 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:16:06] 2025-10-13 16:15:50,360 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140211142739776)>', '<ExcThread(monitor, started 140210834740992)>']
[2025-10-13 12:16:06] 2025-10-13 16:15:55,385 | INFO     | all workflow threads have been joined
[2025-10-13 12:16:06] 2025-10-13 16:15:55,385 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:16:06] 2025-10-13 16:15:55,385 | INFO     | traces error code: 0
[2025-10-13 12:16:06] 2025-10-13 16:15:55,385 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:16:06] 2025-10-13 16:16:06,565 | INFO     | PID=12362 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 12:16:06] 2025-10-13 16:16:06,566 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:16:06] 2025-10-13 16:16:06,566 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:16:06] 2025-10-13 16:16:06,566 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:16:06] 2025-10-13 16:16:06,566 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:16:06] 2025-10-13 16:16:06,566 | INFO     | [monitor] control thread has ended
[2025-10-13 12:16:06] 2025-10-13 16:16:06,673 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:16:06] 2025-10-13 16:16:06,677 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:16:06] 2025-10-13 16:16:06,681 [wrapper] pilotpid: 12362
[2025-10-13 12:16:06] 2025-10-13 16:16:06,685 [wrapper] Pilot exit status: 0
[2025-10-13 12:16:06] 2025-10-13 16:16:06,699 [wrapper] pandaids: 6839221025
[2025-10-13 12:16:06] 2025-10-13 16:16:06,748 [wrapper] cleanup supervisor_pilot 22042 12363
[2025-10-13 12:16:06] 2025-10-13 16:16:06,752 [wrapper] Test setup, not cleaning
[2025-10-13 12:16:06] 2025-10-13 16:16:06,756 [wrapper] apfmon messages muted
[2025-10-13 12:16:06] 2025-10-13 16:16:06,760 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:16:06] 2025-10-13 16:16:06,764 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:16:06]  *** Error codes and diagnostics ***
[2025-10-13 12:16:06]     "exeErrorCode": 0,
[2025-10-13 12:16:06]     "exeErrorDiag": "",
[2025-10-13 12:16:06]     "pilotErrorCode": 0,
[2025-10-13 12:16:06]     "pilotErrorDiag": "",
[2025-10-13 12:16:06]  *** Listing of results directory ***
[2025-10-13 12:16:06] total 407208
[2025-10-13 12:16:06] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 21:25 queuedata.json
[2025-10-13 12:16:06] -rwx------ 1 boincer umatlas     36292 Oct 11 21:26 runpilot2-wrapper.sh
[2025-10-13 12:16:06] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 21:26 pilot3.tar.gz
[2025-10-13 12:16:06] -rw-r--r-- 1 boincer umatlas       100 Oct 13 11:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:16:06] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 11:04 run_atlas
[2025-10-13 12:16:06] -rw-r--r-- 1 boincer umatlas       105 Oct 13 11:04 job.xml
[2025-10-13 12:16:06] -rw-r--r-- 2 boincer umatlas 218990277 Oct 13 11:04 EVNT.46676267._003140.pool.root.1
[2025-10-13 12:16:06] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 11:04 start_atlas.sh
[2025-10-13 12:16:06] drwxrwx--x 2 boincer umatlas      4096 Oct 13 11:04 shared
[2025-10-13 12:16:06] -rw-r--r-- 2 boincer umatlas    569672 Oct 13 11:04 input.tar.gz
[2025-10-13 12:16:06] -rw-r--r-- 1 boincer umatlas         0 Oct 13 11:04 boinc_lockfile
[2025-10-13 12:16:06] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 11:04 pandaJob.out
[2025-10-13 12:16:06] -rw------- 1 boincer umatlas    972791 Oct 13 11:04 agis_schedconf.cvmfs.json
[2025-10-13 12:16:06] -rw------- 1 boincer umatlas   1560580 Oct 13 11:04 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:16:06] drwx------ 5 boincer umatlas      4096 Oct 13 11:04 pilot3
[2025-10-13 12:16:06] -rw-r--r-- 1 boincer umatlas      5953 Oct 13 12:10 init_data.xml
[2025-10-13 12:16:06] -rw------- 1 boincer umatlas 192063171 Oct 13 12:14 HITS.46676269._068351.pool.root.1
[2025-10-13 12:16:06] -rw-r--r-- 1 boincer umatlas       529 Oct 13 12:15 boinc_task_state.xml
[2025-10-13 12:16:06] -rw------- 1 boincer umatlas      1046 Oct 13 12:15 memory_monitor_summary.json
[2025-10-13 12:16:06] -rw------- 1 boincer umatlas    394986 Oct 13 12:15 log.46676269._068351.job.log.tgz.1
[2025-10-13 12:16:06] -rw------- 1 boincer umatlas        95 Oct 13 12:15 pilot_heartbeat.json
[2025-10-13 12:16:06] -rw------- 1 boincer umatlas      7843 Oct 13 12:15 heartbeat.json
[2025-10-13 12:16:06] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 12:15 boinc_mmap_file
[2025-10-13 12:16:06] -rw-r--r-- 1 boincer umatlas        27 Oct 13 12:15 wrapper_checkpoint.txt
[2025-10-13 12:16:06] -rw------- 1 boincer umatlas       745 Oct 13 12:16 pilotlog.txt
[2025-10-13 12:16:06] -rw------- 1 boincer umatlas    620944 Oct 13 12:16 log.46676269._068351.job.log.1
[2025-10-13 12:16:06] -rw------- 1 boincer umatlas       357 Oct 13 12:16 output.list
[2025-10-13 12:16:06] -rw-r--r-- 1 boincer umatlas       620 Oct 13 12:16 runtime_log
[2025-10-13 12:16:06] -rw------- 1 boincer umatlas   1034240 Oct 13 12:16 result.tar.gz
[2025-10-13 12:16:06] -rw-r--r-- 1 boincer umatlas      8705 Oct 13 12:16 runtime_log.err
[2025-10-13 12:16:06] -rw------- 1 boincer umatlas       659 Oct 13 12:16 0U1NDmB2zR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrBiNDmAlp3Em.diag
[2025-10-13 12:16:06] -rw-r--r-- 1 boincer umatlas     22098 Oct 13 12:16 stderr.txt
[2025-10-13 12:16:06] HITS file was successfully produced:
[2025-10-13 12:16:06] -rw------- 1 boincer umatlas 192063171 Oct 13 12:14 shared/HITS.pool.root.1
[2025-10-13 12:16:06]  *** Contents of shared directory: ***
[2025-10-13 12:16:06] total 403016
[2025-10-13 12:16:06] -rw-r--r-- 2 boincer umatlas 218990277 Oct 13 11:04 ATLAS.root_0
[2025-10-13 12:16:06] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 11:04 start_atlas.sh
[2025-10-13 12:16:06] -rw-r--r-- 2 boincer umatlas    569672 Oct 13 11:04 input.tar.gz
[2025-10-13 12:16:06] -rw------- 1 boincer umatlas 192063171 Oct 13 12:14 HITS.pool.root.1
[2025-10-13 12:16:06] -rw------- 1 boincer umatlas   1034240 Oct 13 12:16 result.tar.gz
12:16:08 (8687): run_atlas exited; CPU time 45408.513066
12:16:08 (8687): called boinc_finish(0)

</stderr_txt>
]]>

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