Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:04:07 (1252331): wrapper (7.7.26015): starting
11:04:07 (1252331): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 11:04:07] Arguments: --nthreads 8
[2025-10-13 11:04:07] Threads: 8
[2025-10-13 11:04:07] Checking for CVMFS
[2025-10-13 11:04:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 11:04:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 11:04:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 11:04:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 11:04:09] 2.12.6.0 3376676 86514 306084 151664 1 503 13917757 18491393 17114 16776704 0 104322609 99.426 156357077 31967 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 11:04:09] CVMFS is ok
[2025-10-13 11:04:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 11:04:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 11:04:09] Further information can be found at the LHC@home message board.
[2025-10-13 11:04:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 11:04:09] Checking for apptainer binary...
[2025-10-13 11:04:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 11:04:09] Running /usr/bin/apptainer --version
[2025-10-13 11:04:09] apptainer version 1.4.1-1.el9
[2025-10-13 11:04:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 11:04:09] c-8-38.aglt2.org
[2025-10-13 11:04:09] apptainer works
[2025-10-13 11:04:10] Set ATHENA_PROC_NUMBER=8
[2025-10-13 11:04:10] Set ATHENA_CORE_NUMBER=8
[2025-10-13 11:04:10] Starting ATLAS job with PandaID=6841124522
[2025-10-13 11:04:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:24:54]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:24:54] 2025-10-13 17:23:57,164 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 13:24:54] 2025-10-13 17:23:57,164 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 13:24:54] 2025-10-13 17:23:57,164 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 13:24:54] 2025-10-13 17:23:57,168 | INFO     | fitting pss+swap vs Time
[2025-10-13 13:24:54] 2025-10-13 17:23:57,168 | INFO     | sum of square deviations: 780007779.9705864
[2025-10-13 13:24:54] 2025-10-13 17:23:57,169 | INFO     | sum of deviations: 13846259209.249983
[2025-10-13 13:24:54] 2025-10-13 17:23:57,169 | INFO     | mean x: 1760372050.014706
[2025-10-13 13:24:54] 2025-10-13 17:23:57,169 | INFO     | mean y: 2395573.875
[2025-10-13 13:24:54] 2025-10-13 17:23:57,169 | INFO     | -- intersect: -31246738518.276672
[2025-10-13 13:24:54] 2025-10-13 17:23:57,169 | INFO     | intersect: -31246738518.276672
[2025-10-13 13:24:54] 2025-10-13 17:23:57,170 | INFO     | chi2: 2.3176491139946127
[2025-10-13 13:24:54] 2025-10-13 17:23:57,170 | INFO     | sum of square deviations: 697108898.7022884
[2025-10-13 13:24:54] 2025-10-13 17:23:57,171 | INFO     | sum of deviations: 21812375060.71755
[2025-10-13 13:24:54] 2025-10-13 17:23:57,171 | INFO     | mean x: 1760371897.519084
[2025-10-13 13:24:54] 2025-10-13 17:23:57,171 | INFO     | mean y: 2409767.3129770993
[2025-10-13 13:24:54] 2025-10-13 17:23:57,171 | INFO     | -- intersect: -55079216857.32681
[2025-10-13 13:24:54] 2025-10-13 17:23:57,171 | INFO     | intersect: -55079216857.32681
[2025-10-13 13:24:54] 2025-10-13 17:23:57,171 | INFO     | chi2: 1.622270352564101
[2025-10-13 13:24:54] 2025-10-13 17:23:57,172 | INFO     | current chi2=1.622270352564101 (change=30.003625537257587 %)
[2025-10-13 13:24:54] 2025-10-13 17:23:57,172 | INFO     | sum of square deviations: 620318894.8015863
[2025-10-13 13:24:54] 2025-10-13 17:23:57,173 | INFO     | sum of deviations: 20965056601.396828
[2025-10-13 13:24:54] 2025-10-13 17:23:57,173 | INFO     | mean x: 1760371745.0396826
[2025-10-13 13:24:54] 2025-10-13 17:23:57,173 | INFO     | mean y: 2408084.9206349207
[2025-10-13 13:24:54] 2025-10-13 17:23:57,173 | INFO     | -- intersect: -59493269998.62608
[2025-10-13 13:24:54] 2025-10-13 17:23:57,173 | INFO     | intersect: -59493269998.62608
[2025-10-13 13:24:54] 2025-10-13 17:23:57,173 | INFO     | chi2: 1.6240804644005524
[2025-10-13 13:24:54] 2025-10-13 17:23:57,173 | INFO     | current chi2=1.6240804644005524 (change=-0.11157892601504589 %)
[2025-10-13 13:24:54] 2025-10-13 17:23:57,174 | INFO     | right removable region: 125
[2025-10-13 13:24:54] 2025-10-13 17:23:57,174 | INFO     | sum of square deviations: 697082548.5954199
[2025-10-13 13:24:54] 2025-10-13 17:23:57,175 | INFO     | sum of deviations: -7901920885.648855
[2025-10-13 13:24:54] 2025-10-13 17:23:57,175 | INFO     | mean x: 1760372202.534351
[2025-10-13 13:24:54] 2025-10-13 17:23:57,175 | INFO     | mean y: 2434990.3664122135
[2025-10-13 13:24:54] 2025-10-13 17:23:57,175 | INFO     | -- intersect: 19957491822.22993
[2025-10-13 13:24:54] 2025-10-13 17:23:57,175 | INFO     | intersect: 19957491822.22993
[2025-10-13 13:24:54] 2025-10-13 17:23:57,176 | INFO     | chi2: 0.753950338401179
[2025-10-13 13:24:54] 2025-10-13 17:23:57,176 | INFO     | current chi2=0.753950338401179 (change=67.46917668215538 %)
[2025-10-13 13:24:54] 2025-10-13 17:23:57,176 | INFO     | sum of square deviations: 620250454.6111133
[2025-10-13 13:24:54] 2025-10-13 17:23:57,177 | INFO     | sum of deviations: -7480151158.166666
[2025-10-13 13:24:54] 2025-10-13 17:23:57,177 | INFO     | mean x: 1760372355.0555556
[2025-10-13 13:24:54] 2025-10-13 17:23:57,177 | INFO     | mean y: 2434045.4523809524
[2025-10-13 13:24:54] 2025-10-13 17:23:57,177 | INFO     | -- intersect: 21232327893.300373
[2025-10-13 13:24:54] 2025-10-13 17:23:57,177 | INFO     | intersect: 21232327893.300373
[2025-10-13 13:24:54] 2025-10-13 17:23:57,178 | INFO     | chi2: 0.739014050015664
[2025-10-13 13:24:54] 2025-10-13 17:23:57,178 | INFO     | current chi2=0.739014050015664 (change=1.981070585788017 %)
[2025-10-13 13:24:54] 2025-10-13 17:23:57,178 | INFO     | left removable region: 20
[2025-10-13 13:24:54] 2025-10-13 17:23:57,178 | INFO     | sum of square deviations: 358956355.20000076
[2025-10-13 13:24:54] 2025-10-13 17:23:57,179 | INFO     | sum of deviations: 1453502419.0
[2025-10-13 13:24:54] 2025-10-13 17:23:57,179 | INFO     | mean x: 1760372324.6
[2025-10-13 13:24:54] 2025-10-13 17:23:57,179 | INFO     | mean y: 2448874.6666666665
[2025-10-13 13:24:54] 2025-10-13 17:23:57,179 | INFO     | -- intersect: -7125730902.847264
[2025-10-13 13:24:54] 2025-10-13 17:23:57,179 | INFO     | intersect: -7125730902.847264
[2025-10-13 13:24:54] 2025-10-13 17:23:57,180 | INFO     | chi2: 0.0004001162705021787
[2025-10-13 13:24:54] 2025-10-13 17:23:57,180 | INFO     | -- intersect: -7125730902.847264
[2025-10-13 13:24:54] 2025-10-13 17:23:57,181 | INFO     | current memory leak: 4.05 B/s (using 105 data points, chi2=0.00)
[2025-10-13 13:24:54] 2025-10-13 17:23:57,181 | INFO     | could have reported an average CPU frequency of 2600 MHz (8 samples)
[2025-10-13 13:24:54] 2025-10-13 17:23:57,181 | INFO     | ..............................
[2025-10-13 13:24:54] 2025-10-13 17:23:57,182 | INFO     | . Timing measurements:
[2025-10-13 13:24:54] 2025-10-13 17:23:57,182 | INFO     | . get job = 0 s
[2025-10-13 13:24:54] 2025-10-13 17:23:57,182 | INFO     | . initial setup = 3 s
[2025-10-13 13:24:54] 2025-10-13 17:23:57,182 | INFO     | . payload setup = 19 s
[2025-10-13 13:24:54] 2025-10-13 17:23:57,182 | INFO     | . stage-in = 0 s
[2025-10-13 13:24:54] 2025-10-13 17:23:57,182 | INFO     | . payload execution = 8282 s
[2025-10-13 13:24:54] 2025-10-13 17:23:57,182 | INFO     | . stage-out = 5 s
[2025-10-13 13:24:54] 2025-10-13 17:23:57,182 | INFO     | . log creation = 0 s
[2025-10-13 13:24:54] 2025-10-13 17:23:57,183 | INFO     | ..............................
[2025-10-13 13:24:54] 2025-10-13 17:23:57,858 | INFO     | 
[2025-10-13 13:24:54] 2025-10-13 17:23:57,859 | INFO     | job summary report
[2025-10-13 13:24:54] 2025-10-13 17:23:57,859 | INFO     | --------------------------------------------------
[2025-10-13 13:24:54] 2025-10-13 17:23:57,859 | INFO     | PanDA job id: 6841124522
[2025-10-13 13:24:54] 2025-10-13 17:23:57,859 | INFO     | task id: 46676269
[2025-10-13 13:24:54] 2025-10-13 17:23:57,859 | INFO     | errors: (none)
[2025-10-13 13:24:54] 2025-10-13 17:23:57,859 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 13:24:54] 2025-10-13 17:23:57,859 | INFO     | pilot state: finished 
[2025-10-13 13:24:54] 2025-10-13 17:23:57,859 | INFO     | transexitcode: 0
[2025-10-13 13:24:54] 2025-10-13 17:23:57,859 | INFO     | exeerrorcode: 0
[2025-10-13 13:24:54] 2025-10-13 17:23:57,859 | INFO     | exeerrordiag: 
[2025-10-13 13:24:54] 2025-10-13 17:23:57,860 | INFO     | exitcode: 0
[2025-10-13 13:24:54] 2025-10-13 17:23:57,860 | INFO     | exitmsg: OK
[2025-10-13 13:24:54] 2025-10-13 17:23:57,860 | INFO     | cpuconsumptiontime: 47655 s
[2025-10-13 13:24:54] 2025-10-13 17:23:57,860 | INFO     | nevents: 400
[2025-10-13 13:24:54] 2025-10-13 17:23:57,860 | INFO     | neventsw: 0
[2025-10-13 13:24:54] 2025-10-13 17:23:57,860 | INFO     | pid: 1277249
[2025-10-13 13:24:54] 2025-10-13 17:23:57,860 | INFO     | pgrp: 1277249
[2025-10-13 13:24:54] 2025-10-13 17:23:57,860 | INFO     | corecount: 8
[2025-10-13 13:24:54] 2025-10-13 17:23:57,860 | INFO     | event service: False
[2025-10-13 13:24:54] 2025-10-13 17:23:57,860 | INFO     | sizes: {0: 2348686, 1: 2348885, 10: 2349147, 12: 2349175, 8305: 2377249, 8313: 2386247, 8315: 2386431, 8341: 2386625}
[2025-10-13 13:24:54] 2025-10-13 17:23:57,861 | INFO     | --------------------------------------------------
[2025-10-13 13:24:54] 2025-10-13 17:23:57,861 | INFO     | 
[2025-10-13 13:24:54] 2025-10-13 17:23:57,861 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 13:24:54] 2025-10-13 17:23:57,947 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 13:24:54] 2025-10-13 17:23:57,947 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 13:24:54] 2025-10-13 17:23:57,947 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 13:24:54] 2025-10-13 17:23:57,948 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 13:24:54] 2025-10-13 17:23:57,948 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 13:24:54] 2025-10-13 17:23:57,948 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 13:24:54] 2025-10-13 17:23:57,948 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 13:24:54] 2025-10-13 17:23:57,948 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 13:24:54] 2025-10-13 17:23:57,948 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 13:24:54] 2025-10-13 17:23:57,948 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 13:24:54] 2025-10-13 17:23:57,949 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 13:24:54] 2025-10-13 17:23:57,949 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 13:24:54] 2025-10-13 17:23:57,949 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 13:24:54] 2025-10-13 17:23:57,949 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 13:24:54] 2025-10-13 17:23:57,949 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 13:24:54] 2025-10-13 17:23:57,949 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 13:24:54] 2025-10-13 17:23:57,949 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 13:24:54] 2025-10-13 17:23:57,949 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 13:24:54] 2025-10-13 17:23:57,949 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 13:24:54] 2025-10-13 17:23:57,950 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 13:24:54] 2025-10-13 17:23:57,950 | INFO     | job 6841124522 has completed (purged errors)
[2025-10-13 13:24:54] 2025-10-13 17:23:57,950 | INFO     | overall cleanup function is called
[2025-10-13 13:24:54] 2025-10-13 17:23:58,966 | INFO     | --- collectZombieJob: --- 10, [1277249]
[2025-10-13 13:24:54] 2025-10-13 17:23:58,967 | INFO     | zombie collector waiting for pid 1277249
[2025-10-13 13:24:54] 2025-10-13 17:23:58,967 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 13:24:54] 2025-10-13 17:23:58,967 | INFO     | collected zombie processes
[2025-10-13 13:24:54] 2025-10-13 17:23:58,967 | INFO     | will attempt to kill all subprocesses of pid=1277249
[2025-10-13 13:24:54] 2025-10-13 17:24:00,571 | INFO     | process IDs to be killed: [1277249] (in reverse order)
[2025-10-13 13:24:54] 2025-10-13 17:24:00,735 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 13:24:54] 2025-10-13 17:24:00,735 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 13:24:54] 2025-10-13 17:24:00,757 | INFO     | did not find any defunct processes belonging to 1277249
[2025-10-13 13:24:54] 2025-10-13 17:24:00,771 | INFO     | did not find any defunct processes belonging to 1277249
[2025-10-13 13:24:54] 2025-10-13 17:24:00,771 | INFO     | ready for new job
[2025-10-13 13:24:54] 2025-10-13 17:24:00,771 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 13:24:54] 2025-10-13 17:24:00,773 | INFO     | ***************************************
[2025-10-13 13:24:54] 2025-10-13 17:24:00,773 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 13:24:54] 2025-10-13 17:24:00,773 | INFO     | ***************************************
[2025-10-13 13:24:54] 2025-10-13 17:24:00,773 | INFO     | 
[2025-10-13 13:24:54] 2025-10-13 17:24:00,788 | INFO     | architecture information:
[2025-10-13 13:24:54] 2025-10-13 17:24:00,789 | INFO     | executing command: cat /etc/os-release
[2025-10-13 13:24:54] 2025-10-13 17:24:00,836 | INFO     | cat /etc/os-release:
[2025-10-13 13:24:54] NAME="CentOS Linux"
[2025-10-13 13:24:54] VERSION="7 (Core)"
[2025-10-13 13:24:54] ID="centos"
[2025-10-13 13:24:54] ID_LIKE="rhel fedora"
[2025-10-13 13:24:54] VERSION_ID="7"
[2025-10-13 13:24:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 13:24:54] ANSI_COLOR="0;31"
[2025-10-13 13:24:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 13:24:54] HOME_URL="https://www.centos.org/"
[2025-10-13 13:24:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 13:24:54] 
[2025-10-13 13:24:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 13:24:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 13:24:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:24:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:24:54] 
[2025-10-13 13:24:54] 2025-10-13 17:24:00,836 | INFO     | ***************************************
[2025-10-13 13:24:54] 2025-10-13 17:24:01,340 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 13:24:54] 2025-10-13 17:24:01,388 | INFO     | sufficient remaining disk space (96005521408 B)
[2025-10-13 13:24:54] 2025-10-13 17:24:01,388 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:24:54] 2025-10-13 17:24:01,389 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:24:54] 2025-10-13 17:24:01,389 | INFO     | update_server=False
[2025-10-13 13:24:54] 2025-10-13 17:24:01,389 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:24:54] 2025-10-13 17:24:01,391 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:24:54] 2025-10-13 17:24:01,415 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:24:54] 2025-10-13 17:24:01,416 | INFO     | aborting loop
[2025-10-13 13:24:54] 2025-10-13 17:24:01,416 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:24:54] 2025-10-13 17:24:02,128 | INFO     | all data control threads have been joined
[2025-10-13 13:24:54] 2025-10-13 17:24:02,394 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:24:54] 2025-10-13 17:24:02,422 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:24:54] 2025-10-13 17:24:02,459 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:24:54] 2025-10-13 17:24:02,638 | INFO     | all payload control threads have been joined
[2025-10-13 13:24:54] 2025-10-13 17:24:02,760 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:24:54] 2025-10-13 17:24:02,814 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:24:54] 2025-10-13 17:24:02,826 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:24:54] 2025-10-13 17:24:02,842 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:24:54] 2025-10-13 17:24:02,845 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:24:54] 2025-10-13 17:24:02,858 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:24:54] 2025-10-13 17:24:02,919 | INFO     | [job] validate thread has finished
[2025-10-13 13:24:54] 2025-10-13 17:24:02,943 | INFO     | all job control threads have been joined
[2025-10-13 13:24:54] 2025-10-13 17:24:03,134 | INFO     | [data] control thread has finished
[2025-10-13 13:24:54] 2025-10-13 17:24:03,241 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:24:54] 2025-10-13 17:24:03,424 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:24:54] 2025-10-13 17:24:03,644 | INFO     | [payload] control thread has finished
[2025-10-13 13:24:54] 2025-10-13 17:24:03,864 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:24:54] 2025-10-13 17:24:03,949 | INFO     | [job] control thread has finished
[2025-10-13 13:24:54] 2025-10-13 17:24:05,400 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:24:54] 2025-10-13 17:24:31,361 | INFO     | PID=1258899 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 13:24:54] 2025-10-13 17:24:31,361 | INFO     | .. there are 25 such processes running
[2025-10-13 13:24:54] 2025-10-13 17:24:31,362 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:24:54] 2025-10-13 17:24:31,362 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:24:54] 2025-10-13 17:24:31,363 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:24:54] 2025-10-13 17:24:48,739 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:24:54] 2025-10-13 17:24:48,818 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140401049052992)>', '<ExcThread(monitor, started 140400685717248)>']
[2025-10-13 13:24:54] 2025-10-13 17:24:49,477 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:24:54] 2025-10-13 17:24:49,478 | INFO     | [monitor] control thread has ended
[2025-10-13 13:24:54] 2025-10-13 17:24:53,844 | INFO     | all workflow threads have been joined
[2025-10-13 13:24:54] 2025-10-13 17:24:53,845 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:24:54] 2025-10-13 17:24:53,845 | INFO     | traces error code: 0
[2025-10-13 13:24:54] 2025-10-13 17:24:53,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:24:54] 2025-10-13 17:24:54,334 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:24:54] 2025-10-13 17:24:54,337 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:24:54] 2025-10-13 17:24:54,340 [wrapper] pilotpid: 1258899
[2025-10-13 13:24:54] 2025-10-13 17:24:54,344 [wrapper] Pilot exit status: 0
[2025-10-13 13:24:54] 2025-10-13 17:24:54,357 [wrapper] pandaids: 6841124522
[2025-10-13 13:24:54] 2025-10-13 17:24:54,431 [wrapper] cleanup supervisor_pilot 1552589 1258900
[2025-10-13 13:24:54] 2025-10-13 17:24:54,436 [wrapper] Test setup, not cleaning
[2025-10-13 13:24:54] 2025-10-13 17:24:54,441 [wrapper] apfmon messages muted
[2025-10-13 13:24:54] 2025-10-13 17:24:54,445 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:24:54] 2025-10-13 17:24:54,450 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:24:54]  *** Error codes and diagnostics ***
[2025-10-13 13:24:54]     "exeErrorCode": 0,
[2025-10-13 13:24:54]     "exeErrorDiag": "",
[2025-10-13 13:24:54]     "pilotErrorCode": 0,
[2025-10-13 13:24:54]     "pilotErrorDiag": "",
[2025-10-13 13:24:54]  *** Listing of results directory ***
[2025-10-13 13:24:54] total 413704
[2025-10-13 13:24:54] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 21:18 pilot3.tar.gz
[2025-10-13 13:24:54] -rwx------. 1 boincer umatlas     36292 Oct 12 21:51 runpilot2-wrapper.sh
[2025-10-13 13:24:54] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 21:51 queuedata.json
[2025-10-13 13:24:54] -rw-r--r--. 1 boincer umatlas       100 Oct 13 11:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:24:54] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 11:04 run_atlas
[2025-10-13 13:24:54] -rw-r--r--. 1 boincer umatlas       105 Oct 13 11:04 job.xml
[2025-10-13 13:24:54] -rw-r--r--. 2 boincer umatlas 221242134 Oct 13 11:04 EVNT.46676267._004368.pool.root.1
[2025-10-13 13:24:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 11:04 start_atlas.sh
[2025-10-13 13:24:54] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 11:04 shared
[2025-10-13 13:24:54] -rw-r--r--. 2 boincer umatlas    569676 Oct 13 11:04 input.tar.gz
[2025-10-13 13:24:54] -rw-r--r--. 1 boincer umatlas         0 Oct 13 11:04 boinc_lockfile
[2025-10-13 13:24:54] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 11:04 pandaJob.out
[2025-10-13 13:24:54] -rw-------. 1 boincer umatlas    972791 Oct 13 11:04 agis_schedconf.cvmfs.json
[2025-10-13 13:24:54] -rw-------. 1 boincer umatlas   1560580 Oct 13 11:04 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:24:54] drwx------. 5 boincer umatlas      4096 Oct 13 11:04 pilot3
[2025-10-13 13:24:54] -rw-r--r--. 1 boincer umatlas      6659 Oct 13 13:21 init_data.xml
[2025-10-13 13:24:54] -rw-------. 1 boincer umatlas 195420149 Oct 13 13:22 HITS.46676269._094389.pool.root.1
[2025-10-13 13:24:54] -rw-r--r--. 1 boincer umatlas       529 Oct 13 13:22 boinc_task_state.xml
[2025-10-13 13:24:54] -rw-------. 1 boincer umatlas      1037 Oct 13 13:23 memory_monitor_summary.json
[2025-10-13 13:24:54] -rw-------. 1 boincer umatlas    372837 Oct 13 13:23 log.46676269._094389.job.log.tgz.1
[2025-10-13 13:24:54] -rw-------. 1 boincer umatlas      7808 Oct 13 13:23 heartbeat.json
[2025-10-13 13:24:54] -rw-------. 1 boincer umatlas        95 Oct 13 13:24 pilot_heartbeat.json
[2025-10-13 13:24:54] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 13:24 boinc_mmap_file
[2025-10-13 13:24:54] -rw-r--r--. 1 boincer umatlas        27 Oct 13 13:24 wrapper_checkpoint.txt
[2025-10-13 13:24:54] -rw-------. 1 boincer umatlas      4824 Oct 13 13:24 pilotlog.txt
[2025-10-13 13:24:54] -rw-------. 1 boincer umatlas   1159449 Oct 13 13:24 log.46676269._094389.job.log.1
[2025-10-13 13:24:54] -rw-------. 1 boincer umatlas       357 Oct 13 13:24 output.list
[2025-10-13 13:24:54] -rw-r--r--. 1 boincer umatlas       620 Oct 13 13:24 runtime_log
[2025-10-13 13:24:54] -rw-------. 1 boincer umatlas   1556480 Oct 13 13:24 result.tar.gz
[2025-10-13 13:24:54] -rw-r--r--. 1 boincer umatlas      8693 Oct 13 13:24 runtime_log.err
[2025-10-13 13:24:54] -rw-------. 1 boincer umatlas       650 Oct 13 13:24 d3RNDmitMS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmIUVMDmSWu7Co.diag
[2025-10-13 13:24:54] -rw-r--r--. 1 boincer umatlas     20963 Oct 13 13:24 stderr.txt
[2025-10-13 13:24:54] HITS file was successfully produced:
[2025-10-13 13:24:54] -rw-------. 1 boincer umatlas 195420149 Oct 13 13:22 shared/HITS.pool.root.1
[2025-10-13 13:24:54]  *** Contents of shared directory: ***
[2025-10-13 13:24:54] total 409000
[2025-10-13 13:24:54] -rw-r--r--. 2 boincer umatlas 221242134 Oct 13 11:04 ATLAS.root_0
[2025-10-13 13:24:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 11:04 start_atlas.sh
[2025-10-13 13:24:54] -rw-r--r--. 2 boincer umatlas    569676 Oct 13 11:04 input.tar.gz
[2025-10-13 13:24:54] -rw-------. 1 boincer umatlas 195420149 Oct 13 13:22 HITS.pool.root.1
[2025-10-13 13:24:54] -rw-------. 1 boincer umatlas   1556480 Oct 13 13:24 result.tar.gz
13:24:56 (1252331): run_atlas exited; CPU time 47929.388782
13:24:56 (1252331): called boinc_finish(0)

</stderr_txt>
]]>

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