Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:04:00 (1250928): wrapper (7.7.26015): starting
11:04:00 (1250928): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 11:04:00] Arguments: --nthreads 8
[2025-10-13 11:04:00] Threads: 8
[2025-10-13 11:04:00] Checking for CVMFS
[2025-10-13 11:04:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 11:04:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 11:04:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 11:04:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 11:04:01] 2.12.6.0 3376676 86514 306084 151664 2 503 13917757 18491393 17097 16776704 0 104319022 99.426 156357077 31967 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 11:04:01] CVMFS is ok
[2025-10-13 11:04:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 11:04:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 11:04:01] Further information can be found at the LHC@home message board.
[2025-10-13 11:04:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 11:04:01] Checking for apptainer binary...
[2025-10-13 11:04:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 11:04:01] Running /usr/bin/apptainer --version
[2025-10-13 11:04:01] apptainer version 1.4.1-1.el9
[2025-10-13 11:04:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 11:04:01] c-8-38.aglt2.org
[2025-10-13 11:04:01] apptainer works
[2025-10-13 11:04:01] Set ATHENA_PROC_NUMBER=8
[2025-10-13 11:04:01] Set ATHENA_CORE_NUMBER=8
[2025-10-13 11:04:02] Starting ATLAS job with PandaID=6840970183
[2025-10-13 11:04:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:58:51]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:58:51] 2025-10-13 17:58:12,114 | INFO     | chi2: 2.1163224084015653
[2025-10-13 13:58:51] 2025-10-13 17:58:12,114 | INFO     | sum of square deviations: 1392850101.3939378
[2025-10-13 13:58:51] 2025-10-13 17:58:12,115 | INFO     | sum of deviations: 39580569267.636375
[2025-10-13 13:58:51] 2025-10-13 17:58:12,116 | INFO     | mean x: 1760372922.060606
[2025-10-13 13:58:51] 2025-10-13 17:58:12,116 | INFO     | mean y: 2154345.2363636363
[2025-10-13 13:58:51] 2025-10-13 17:58:12,116 | INFO     | -- intersect: -50022297179.561806
[2025-10-13 13:58:51] 2025-10-13 17:58:12,116 | INFO     | intersect: -50022297179.561806
[2025-10-13 13:58:51] 2025-10-13 17:58:12,116 | INFO     | chi2: 2.108877033578371
[2025-10-13 13:58:51] 2025-10-13 17:58:12,116 | INFO     | current chi2=2.108877033578371 (change=0.35180721016973093 %)
[2025-10-13 13:58:51] 2025-10-13 17:58:12,117 | INFO     | right removable region: 164
[2025-10-13 13:58:51] 2025-10-13 17:58:12,117 | INFO     | sum of square deviations: 1392844001.3939378
[2025-10-13 13:58:51] 2025-10-13 17:58:12,134 | INFO     | sum of deviations: 7863801578.30303
[2025-10-13 13:58:51] 2025-10-13 17:58:12,134 | INFO     | mean x: 1760373227.060606
[2025-10-13 13:58:51] 2025-10-13 17:58:12,167 | INFO     | mean y: 2191453.3696969696
[2025-10-13 13:58:51] 2025-10-13 17:58:12,168 | INFO     | -- intersect: -9936628506.013762
[2025-10-13 13:58:51] 2025-10-13 17:58:12,168 | INFO     | intersect: -9936628506.013762
[2025-10-13 13:58:51] 2025-10-13 17:58:12,168 | INFO     | chi2: 0.12163459155610835
[2025-10-13 13:58:51] 2025-10-13 17:58:12,168 | INFO     | current chi2=0.12163459155610835 (change=94.25254908830372 %)
[2025-10-13 13:58:51] 2025-10-13 17:58:12,169 | INFO     | sum of square deviations: 1270010741.375
[2025-10-13 13:58:51] 2025-10-13 17:58:12,170 | INFO     | sum of deviations: 4993549246.25
[2025-10-13 13:58:51] 2025-10-13 17:58:12,170 | INFO     | mean x: 1760373379.5625
[2025-10-13 13:58:51] 2025-10-13 17:58:12,170 | INFO     | mean y: 2194923.775
[2025-10-13 13:58:51] 2025-10-13 17:58:12,170 | INFO     | -- intersect: -6919408867.635207
[2025-10-13 13:58:51] 2025-10-13 17:58:12,170 | INFO     | intersect: -6919408867.635207
[2025-10-13 13:58:51] 2025-10-13 17:58:12,171 | INFO     | chi2: 0.07421021101810032
[2025-10-13 13:58:51] 2025-10-13 17:58:12,171 | INFO     | current chi2=0.07421021101810032 (change=38.98922167723301 %)
[2025-10-13 13:58:51] 2025-10-13 17:58:12,171 | INFO     | sum of square deviations: 1154639485.5870936
[2025-10-13 13:58:51] 2025-10-13 17:58:12,184 | INFO     | sum of deviations: 6408218111.277424
[2025-10-13 13:58:51] 2025-10-13 17:58:12,185 | INFO     | mean x: 1760373532.0516129
[2025-10-13 13:58:51] 2025-10-13 17:58:12,185 | INFO     | mean y: 2193112.0903225807
[2025-10-13 13:58:51] 2025-10-13 17:58:12,185 | INFO     | -- intersect: -9767832676.496525
[2025-10-13 13:58:51] 2025-10-13 17:58:12,185 | INFO     | intersect: -9767832676.496525
[2025-10-13 13:58:51] 2025-10-13 17:58:12,185 | INFO     | chi2: 0.05167634066456587
[2025-10-13 13:58:51] 2025-10-13 17:58:12,186 | INFO     | current chi2=0.05167634066456587 (change=30.36491884929192 %)
[2025-10-13 13:58:51] 2025-10-13 17:58:12,186 | INFO     | sum of square deviations: 1046467727.1733305
[2025-10-13 13:58:51] 2025-10-13 17:58:12,187 | INFO     | sum of deviations: 4577302980.8
[2025-10-13 13:58:51] 2025-10-13 17:58:12,187 | INFO     | mean x: 1760373684.5466666
[2025-10-13 13:58:51] 2025-10-13 17:58:12,187 | INFO     | mean y: 2195710.1
[2025-10-13 13:58:51] 2025-10-13 17:58:12,205 | INFO     | -- intersect: -7697768182.109641
[2025-10-13 13:58:51] 2025-10-13 17:58:12,206 | INFO     | intersect: -7697768182.109641
[2025-10-13 13:58:51] 2025-10-13 17:58:12,206 | INFO     | chi2: 0.045551086357755746
[2025-10-13 13:58:51] 2025-10-13 17:58:12,206 | INFO     | current chi2=0.045551086357755746 (change=11.853111555575314 %)
[2025-10-13 13:58:51] 2025-10-13 17:58:12,206 | INFO     | left removable region: 40
[2025-10-13 13:58:51] 2025-10-13 17:58:12,207 | INFO     | sum of square deviations: 591158998.709679
[2025-10-13 13:58:51] 2025-10-13 17:58:12,207 | INFO     | sum of deviations: 3575653288.5806456
[2025-10-13 13:58:51] 2025-10-13 17:58:12,207 | INFO     | mean x: 1760374111.548387
[2025-10-13 13:58:51] 2025-10-13 17:58:12,208 | INFO     | mean y: 2199493.4032258065
[2025-10-13 13:58:51] 2025-10-13 17:58:12,208 | INFO     | -- intersect: -10645506952.458517
[2025-10-13 13:58:51] 2025-10-13 17:58:12,208 | INFO     | intersect: -10645506952.458517
[2025-10-13 13:58:51] 2025-10-13 17:58:12,208 | INFO     | chi2: 0.03730156936234333
[2025-10-13 13:58:51] 2025-10-13 17:58:12,208 | INFO     | -- intersect: -10645506952.458517
[2025-10-13 13:58:51] 2025-10-13 17:58:12,208 | INFO     | current memory leak: 6.05 B/s (using 124 data points, chi2=0.04)
[2025-10-13 13:58:51] 2025-10-13 17:58:12,209 | INFO     | could have reported an average CPU frequency of 2600 MHz (9 samples)
[2025-10-13 13:58:51] 2025-10-13 17:58:12,209 | INFO     | ..............................
[2025-10-13 13:58:51] 2025-10-13 17:58:12,226 | INFO     | . Timing measurements:
[2025-10-13 13:58:51] 2025-10-13 17:58:12,227 | INFO     | . get job = 0 s
[2025-10-13 13:58:51] 2025-10-13 17:58:12,227 | INFO     | . initial setup = 3 s
[2025-10-13 13:58:51] 2025-10-13 17:58:12,227 | INFO     | . payload setup = 14 s
[2025-10-13 13:58:51] 2025-10-13 17:58:12,227 | INFO     | . stage-in = 0 s
[2025-10-13 13:58:51] 2025-10-13 17:58:12,227 | INFO     | . payload execution = 10371 s
[2025-10-13 13:58:51] 2025-10-13 17:58:12,227 | INFO     | . stage-out = 0 s
[2025-10-13 13:58:51] 2025-10-13 17:58:12,227 | INFO     | . log creation = 0 s
[2025-10-13 13:58:51] 2025-10-13 17:58:12,227 | INFO     | ..............................
[2025-10-13 13:58:51] 2025-10-13 17:58:12,748 | INFO     | 
[2025-10-13 13:58:51] 2025-10-13 17:58:12,749 | INFO     | job summary report
[2025-10-13 13:58:51] 2025-10-13 17:58:12,749 | INFO     | --------------------------------------------------
[2025-10-13 13:58:51] 2025-10-13 17:58:12,749 | INFO     | PanDA job id: 6840970183
[2025-10-13 13:58:51] 2025-10-13 17:58:12,749 | INFO     | task id: 46676269
[2025-10-13 13:58:51] 2025-10-13 17:58:12,749 | INFO     | errors: (none)
[2025-10-13 13:58:51] 2025-10-13 17:58:12,749 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 13:58:51] 2025-10-13 17:58:12,749 | INFO     | pilot state: finished 
[2025-10-13 13:58:51] 2025-10-13 17:58:12,749 | INFO     | transexitcode: 0
[2025-10-13 13:58:51] 2025-10-13 17:58:12,749 | INFO     | exeerrorcode: 0
[2025-10-13 13:58:51] 2025-10-13 17:58:12,750 | INFO     | exeerrordiag: 
[2025-10-13 13:58:51] 2025-10-13 17:58:12,750 | INFO     | exitcode: 0
[2025-10-13 13:58:51] 2025-10-13 17:58:12,750 | INFO     | exitmsg: OK
[2025-10-13 13:58:51] 2025-10-13 17:58:12,750 | INFO     | cpuconsumptiontime: 50668 s
[2025-10-13 13:58:51] 2025-10-13 17:58:12,750 | INFO     | nevents: 400
[2025-10-13 13:58:51] 2025-10-13 17:58:12,750 | INFO     | neventsw: 0
[2025-10-13 13:58:51] 2025-10-13 17:58:12,750 | INFO     | pid: 1270667
[2025-10-13 13:58:51] 2025-10-13 17:58:12,750 | INFO     | pgrp: 1270667
[2025-10-13 13:58:51] 2025-10-13 17:58:12,750 | INFO     | corecount: 8
[2025-10-13 13:58:51] 2025-10-13 17:58:12,750 | INFO     | event service: False
[2025-10-13 13:58:51] 2025-10-13 17:58:12,751 | INFO     | sizes: {0: 2348857, 1: 2348885, 10: 2349147, 12: 2349175, 10389: 2378186, 10390: 2378185, 10392: 2387367, 10396: 2387423, 10405: 2387681}
[2025-10-13 13:58:51] 2025-10-13 17:58:12,751 | INFO     | --------------------------------------------------
[2025-10-13 13:58:51] 2025-10-13 17:58:12,751 | INFO     | 
[2025-10-13 13:58:51] 2025-10-13 17:58:12,751 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 13:58:51] 2025-10-13 17:58:12,859 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 13:58:51] 2025-10-13 17:58:12,859 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 13:58:51] 2025-10-13 17:58:12,859 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 13:58:51] 2025-10-13 17:58:12,859 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 13:58:51] 2025-10-13 17:58:12,859 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 13:58:51] 2025-10-13 17:58:12,859 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 13:58:51] 2025-10-13 17:58:12,860 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 13:58:51] 2025-10-13 17:58:12,860 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 13:58:51] 2025-10-13 17:58:12,860 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 13:58:51] 2025-10-13 17:58:12,860 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 13:58:51] 2025-10-13 17:58:12,860 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 13:58:51] 2025-10-13 17:58:12,860 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 13:58:51] 2025-10-13 17:58:12,860 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 13:58:51] 2025-10-13 17:58:12,860 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 13:58:51] 2025-10-13 17:58:12,860 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 13:58:51] 2025-10-13 17:58:12,861 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 13:58:51] 2025-10-13 17:58:12,861 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 13:58:51] 2025-10-13 17:58:12,861 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 13:58:51] 2025-10-13 17:58:12,861 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 13:58:51] 2025-10-13 17:58:12,861 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 13:58:51] 2025-10-13 17:58:12,861 | INFO     | job 6840970183 has completed (purged errors)
[2025-10-13 13:58:51] 2025-10-13 17:58:12,861 | INFO     | overall cleanup function is called
[2025-10-13 13:58:51] 2025-10-13 17:58:13,870 | INFO     | --- collectZombieJob: --- 10, [1270667]
[2025-10-13 13:58:51] 2025-10-13 17:58:13,871 | INFO     | zombie collector waiting for pid 1270667
[2025-10-13 13:58:51] 2025-10-13 17:58:13,871 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 13:58:51] 2025-10-13 17:58:13,871 | INFO     | collected zombie processes
[2025-10-13 13:58:51] 2025-10-13 17:58:13,871 | INFO     | will attempt to kill all subprocesses of pid=1270667
[2025-10-13 13:58:51] 2025-10-13 17:58:14,258 | INFO     | process IDs to be killed: [1270667] (in reverse order)
[2025-10-13 13:58:51] 2025-10-13 17:58:14,388 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 13:58:51] 2025-10-13 17:58:14,388 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 13:58:51] 2025-10-13 17:58:14,401 | INFO     | did not find any defunct processes belonging to 1270667
[2025-10-13 13:58:51] 2025-10-13 17:58:14,413 | INFO     | did not find any defunct processes belonging to 1270667
[2025-10-13 13:58:51] 2025-10-13 17:58:14,414 | INFO     | ready for new job
[2025-10-13 13:58:51] 2025-10-13 17:58:14,414 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 13:58:51] 2025-10-13 17:58:14,416 | INFO     | ***************************************
[2025-10-13 13:58:51] 2025-10-13 17:58:14,416 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 13:58:51] 2025-10-13 17:58:14,416 | INFO     | ***************************************
[2025-10-13 13:58:51] 2025-10-13 17:58:14,416 | INFO     | 
[2025-10-13 13:58:51] 2025-10-13 17:58:14,430 | INFO     | architecture information:
[2025-10-13 13:58:51] 2025-10-13 17:58:14,431 | INFO     | executing command: cat /etc/os-release
[2025-10-13 13:58:51] 2025-10-13 17:58:14,461 | INFO     | cat /etc/os-release:
[2025-10-13 13:58:51] NAME="CentOS Linux"
[2025-10-13 13:58:51] VERSION="7 (Core)"
[2025-10-13 13:58:51] ID="centos"
[2025-10-13 13:58:51] ID_LIKE="rhel fedora"
[2025-10-13 13:58:51] VERSION_ID="7"
[2025-10-13 13:58:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 13:58:51] ANSI_COLOR="0;31"
[2025-10-13 13:58:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 13:58:51] HOME_URL="https://www.centos.org/"
[2025-10-13 13:58:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 13:58:51] 
[2025-10-13 13:58:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 13:58:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 13:58:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:58:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:58:51] 
[2025-10-13 13:58:51] 2025-10-13 17:58:14,461 | INFO     | ***************************************
[2025-10-13 13:58:51] 2025-10-13 17:58:14,965 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 13:58:51] 2025-10-13 17:58:14,981 | INFO     | sufficient remaining disk space (96606355456 B)
[2025-10-13 13:58:51] 2025-10-13 17:58:14,982 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:58:51] 2025-10-13 17:58:14,982 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:58:51] 2025-10-13 17:58:14,982 | INFO     | update_server=False
[2025-10-13 13:58:51] 2025-10-13 17:58:14,982 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:58:51] 2025-10-13 17:58:14,982 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:58:51] 2025-10-13 17:58:15,191 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 13:58:51] 2025-10-13 17:58:15,192 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 13:58:51] 2025-10-13 17:58:15,192 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:58:51] 2025-10-13 17:58:15,192 | INFO     | will abort loop
[2025-10-13 13:58:51] 2025-10-13 17:58:15,607 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:58:51] 2025-10-13 17:58:15,611 | INFO     | all data control threads have been joined
[2025-10-13 13:58:51] 2025-10-13 17:58:15,807 | INFO     | all payload control threads have been joined
[2025-10-13 13:58:51] 2025-10-13 17:58:15,987 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:58:51] 2025-10-13 17:58:16,007 | INFO     | all job control threads have been joined
[2025-10-13 13:58:51] 2025-10-13 17:58:16,034 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:58:51] 2025-10-13 17:58:16,034 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:58:51] 2025-10-13 17:58:16,068 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:58:51] 2025-10-13 17:58:16,196 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:58:51] 2025-10-13 17:58:16,466 | INFO     | [job] validate thread has finished
[2025-10-13 13:58:51] 2025-10-13 17:58:16,568 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:58:51] 2025-10-13 17:58:16,616 | INFO     | [data] control thread has finished
[2025-10-13 13:58:51] 2025-10-13 17:58:16,687 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:58:51] 2025-10-13 17:58:16,813 | INFO     | [payload] control thread has finished
[2025-10-13 13:58:51] 2025-10-13 17:58:16,834 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:58:51] 2025-10-13 17:58:17,012 | INFO     | [job] control thread has finished
[2025-10-13 13:58:51] 2025-10-13 17:58:17,540 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:58:51] 2025-10-13 17:58:17,602 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:58:51] 2025-10-13 17:58:17,612 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:58:51] 2025-10-13 17:58:18,607 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:58:51] 2025-10-13 17:58:18,988 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:58:51] 2025-10-13 17:58:43,960 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:58:51] 2025-10-13 17:58:45,122 | INFO     | PID=1256635 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 13:58:51] 2025-10-13 17:58:45,122 | INFO     | .. there are 21 such processes running
[2025-10-13 13:58:51] 2025-10-13 17:58:45,124 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:58:51] 2025-10-13 17:58:45,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:58:51] 2025-10-13 17:58:45,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:58:51] 2025-10-13 17:58:45,949 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140280833648448)>', '<ExcThread(monitor, started 140280200161024)>']
[2025-10-13 13:58:51] 2025-10-13 17:58:46,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:58:51] 2025-10-13 17:58:46,130 | INFO     | [monitor] control thread has ended
[2025-10-13 13:58:51] 2025-10-13 17:58:50,974 | INFO     | all workflow threads have been joined
[2025-10-13 13:58:51] 2025-10-13 17:58:50,975 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:58:51] 2025-10-13 17:58:50,975 | INFO     | traces error code: 0
[2025-10-13 13:58:51] 2025-10-13 17:58:50,975 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:58:51] 2025-10-13 17:58:51,126 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:58:51] 2025-10-13 17:58:51,134 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:58:51] 2025-10-13 17:58:51,137 [wrapper] pilotpid: 1256635
[2025-10-13 13:58:51] 2025-10-13 17:58:51,140 [wrapper] Pilot exit status: 0
[2025-10-13 13:58:51] 2025-10-13 17:58:51,155 [wrapper] pandaids: 6840970183
[2025-10-13 13:58:51] 2025-10-13 17:58:51,249 [wrapper] cleanup supervisor_pilot 1653902 1256636
[2025-10-13 13:58:51] 2025-10-13 17:58:51,252 [wrapper] Test setup, not cleaning
[2025-10-13 13:58:51] 2025-10-13 17:58:51,258 [wrapper] apfmon messages muted
[2025-10-13 13:58:51] 2025-10-13 17:58:51,261 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:58:51] 2025-10-13 17:58:51,264 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:58:51]  *** Error codes and diagnostics ***
[2025-10-13 13:58:51]     "exeErrorCode": 0,
[2025-10-13 13:58:51]     "exeErrorDiag": "",
[2025-10-13 13:58:51]     "pilotErrorCode": 0,
[2025-10-13 13:58:51]     "pilotErrorDiag": "",
[2025-10-13 13:58:51]  *** Listing of results directory ***
[2025-10-13 13:58:51] total 412244
[2025-10-13 13:58:51] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:51 pilot3.tar.gz
[2025-10-13 13:58:51] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:55 queuedata.json
[2025-10-13 13:58:51] -rwx------. 1 boincer umatlas     36292 Oct 12 19:56 runpilot2-wrapper.sh
[2025-10-13 13:58:51] -rw-r--r--. 1 boincer umatlas       100 Oct 13 11:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:58:51] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 11:03 run_atlas
[2025-10-13 13:58:51] -rw-r--r--. 1 boincer umatlas       105 Oct 13 11:03 job.xml
[2025-10-13 13:58:51] -rw-r--r--. 2 boincer umatlas 220686994 Oct 13 11:04 EVNT.46676267._004673.pool.root.1
[2025-10-13 13:58:51] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 11:04 input.tar.gz
[2025-10-13 13:58:51] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 11:04 start_atlas.sh
[2025-10-13 13:58:51] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 11:04 shared
[2025-10-13 13:58:51] -rw-r--r--. 1 boincer umatlas         0 Oct 13 11:04 boinc_lockfile
[2025-10-13 13:58:51] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 11:04 pandaJob.out
[2025-10-13 13:58:51] -rw-------. 1 boincer umatlas    972791 Oct 13 11:04 agis_schedconf.cvmfs.json
[2025-10-13 13:58:51] -rw-------. 1 boincer umatlas   1560580 Oct 13 11:04 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:58:51] drwx------. 5 boincer umatlas      4096 Oct 13 11:04 pilot3
[2025-10-13 13:58:51] -rw-r--r--. 1 boincer umatlas      6659 Oct 13 13:56 init_data.xml
[2025-10-13 13:58:51] -rw-------. 1 boincer umatlas 193861102 Oct 13 13:57 HITS.46676269._092603.pool.root.1
[2025-10-13 13:58:51] -rw-r--r--. 1 boincer umatlas       530 Oct 13 13:57 boinc_task_state.xml
[2025-10-13 13:58:51] -rw-------. 1 boincer umatlas      1037 Oct 13 13:57 memory_monitor_summary.json
[2025-10-13 13:58:51] -rw-------. 1 boincer umatlas    409176 Oct 13 13:57 log.46676269._092603.job.log.tgz.1
[2025-10-13 13:58:51] -rw-------. 1 boincer umatlas      7820 Oct 13 13:58 heartbeat.json
[2025-10-13 13:58:51] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 13:58 boinc_mmap_file
[2025-10-13 13:58:51] -rw-r--r--. 1 boincer umatlas        28 Oct 13 13:58 wrapper_checkpoint.txt
[2025-10-13 13:58:51] -rw-------. 1 boincer umatlas        95 Oct 13 13:58 pilot_heartbeat.json
[2025-10-13 13:58:51] -rw-------. 1 boincer umatlas      5010 Oct 13 13:58 pilotlog.txt
[2025-10-13 13:58:51] -rw-------. 1 boincer umatlas   1434527 Oct 13 13:58 log.46676269._092603.job.log.1
[2025-10-13 13:58:51] -rw-------. 1 boincer umatlas       357 Oct 13 13:58 output.list
[2025-10-13 13:58:51] -rw-r--r--. 1 boincer umatlas       620 Oct 13 13:58 runtime_log
[2025-10-13 13:58:51] -rw-------. 1 boincer umatlas   1863680 Oct 13 13:58 result.tar.gz
[2025-10-13 13:58:51] -rw-r--r--. 1 boincer umatlas      8694 Oct 13 13:58 runtime_log.err
[2025-10-13 13:58:51] -rw-------. 1 boincer umatlas       652 Oct 13 13:58 om2MDmB6KS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjJVMDmW1pJgn.diag
[2025-10-13 13:58:51] -rw-r--r--. 1 boincer umatlas     21035 Oct 13 13:58 stderr.txt
[2025-10-13 13:58:51] HITS file was successfully produced:
[2025-10-13 13:58:51] -rw-------. 1 boincer umatlas 193861102 Oct 13 13:57 shared/HITS.pool.root.1
[2025-10-13 13:58:51]  *** Contents of shared directory: ***
[2025-10-13 13:58:51] total 407240
[2025-10-13 13:58:51] -rw-r--r--. 2 boincer umatlas 220686994 Oct 13 11:04 ATLAS.root_0
[2025-10-13 13:58:51] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 11:04 input.tar.gz
[2025-10-13 13:58:51] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 11:04 start_atlas.sh
[2025-10-13 13:58:51] -rw-------. 1 boincer umatlas 193861102 Oct 13 13:57 HITS.pool.root.1
[2025-10-13 13:58:51] -rw-------. 1 boincer umatlas   1863680 Oct 13 13:58 result.tar.gz
13:59:13 (1250928): run_atlas exited; CPU time 51056.398668
13:59:13 (1250928): called boinc_finish(0)

</stderr_txt>
]]>

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