Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:58:17 (29786): wrapper (7.7.26015): starting
10:58:17 (29786): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 10:58:17] Arguments: --nthreads 12
[2025-10-13 10:58:17] Threads: 12
[2025-10-13 10:58:17] Checking for CVMFS
[2025-10-13 10:58:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:58:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:58:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:58:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:58:17] 2.11.2.0 2991 224426 101384 151664 2 59 15929134 20275200 1 130560 1 110903957 99.984 13509201 12508 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 10:58:17] CVMFS is ok
[2025-10-13 10:58:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 10:58:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 10:58:17] Further information can be found at the LHC@home message board.
[2025-10-13 10:58:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:58:17] Checking for apptainer binary...
[2025-10-13 10:58:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 10:58:17] Running /usr/bin/apptainer --version
[2025-10-13 10:58:17] apptainer version 1.3.2-1.el7
[2025-10-13 10:58:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:58:18] c-205-32.aglt2.org
[2025-10-13 10:58:18] apptainer works
[2025-10-13 10:58:18] Set ATHENA_PROC_NUMBER=12
[2025-10-13 10:58:18] Set ATHENA_CORE_NUMBER=12
[2025-10-13 10:58:18] Starting ATLAS job with PandaID=6837338850
[2025-10-13 10:58:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:16:02]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:16:02]  replicas=None
[2025-10-13 12:16:02]  scope=mc23_13p6TeV
[2025-10-13 12:16:02]  status=None
[2025-10-13 12:16:02]  status_code=0
[2025-10-13 12:16:02]  storage_token=
[2025-10-13 12:16:02]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6837338850/log.46676269._017755.job.log.tgz.1
[2025-10-13 12:16:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/85/31/log.46676269._017755.job.log.tgz.1
[2025-10-13 12:16:02]  workdir=None
[2025-10-13 12:16:02] ]
[2025-10-13 12:16:02] 2025-10-13 16:15:24,872 | INFO     | transferring file log.46676269._017755.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6837338850/log.46676269._017755.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 12:16:02] 2025-10-13 16:15:24,872 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6837338850/log.46676269._017755.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._017755.job
[2025-10-13 12:16:02] 2025-10-13 16:15:24,894 | INFO     | adding to output.list: log.46676269._017755.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/85/31/log.46676269._017755.job.log.tg
[2025-10-13 12:16:02] 2025-10-13 16:15:24,895 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 12:16:02] 2025-10-13 16:15:24,895 | INFO     | summary of transferred files:
[2025-10-13 12:16:02] 2025-10-13 16:15:24,895 | INFO     |  -- lfn=log.46676269._017755.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 12:16:02] 2025-10-13 16:15:24,895 | INFO     | stage-out finished correctly
[2025-10-13 12:16:02] 2025-10-13 16:15:24,978 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 12:16:02] 2025-10-13 16:15:25,058 | INFO     | job 6837338850 has state=finished
[2025-10-13 12:16:02] 2025-10-13 16:15:25,058 | INFO     | preparing for final server update for job 6837338850 in state='finished'
[2025-10-13 12:16:02] 2025-10-13 16:15:25,059 | INFO     | this job has now completed (state=finished)
[2025-10-13 12:16:02] 2025-10-13 16:15:25,059 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 12:16:02] 2025-10-13 16:15:25,059 | INFO     | log transfer has been attempted: DONE
[2025-10-13 12:16:02] 2025-10-13 16:15:25,059 | INFO     | job 6837338850 has finished - writing final server update
[2025-10-13 12:16:02] 2025-10-13 16:15:25,060 | INFO     | total number of processed events: 400 (read)
[2025-10-13 12:16:02] 2025-10-13 16:15:25,061 | INFO     | executing command: lscpu
[2025-10-13 12:16:02] 2025-10-13 16:15:25,087 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 12:16:02] 2025-10-13 16:15:26,682 | INFO     | time since job start (4613s) is within the limit (172800.0s)
[2025-10-13 12:16:02] 2025-10-13 16:15:28,337 | WARNING  | process 7542 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 12:16:02] 2025-10-13 16:15:28,337 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837338850/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 12:16:02] 2025-10-13 16:15:28,338 | INFO     | reaping zombies for max 20 seconds
[2025-10-13 12:16:02] 2025-10-13 16:15:28,349 | INFO     | checking for looping job (in state=finished)
[2025-10-13 12:16:02] 2025-10-13 16:15:28,350 | INFO     | using looping job limit: 7200 s
[2025-10-13 12:16:02] 2025-10-13 16:15:28,444 | INFO     | number of running child processes to parent process 7542: 1
[2025-10-13 12:16:02] 2025-10-13 16:15:28,444 | INFO     | maximum number of monitored processes: 6
[2025-10-13 12:16:02] 2025-10-13 16:15:28,683 | INFO     | time since job start (4615s) is within the limit (172800.0s)
[2025-10-13 12:16:02] 2025-10-13 16:15:29,662 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 12:16:02] 2025-10-13 16:15:29,666 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-10-13 12:16:02] 2025-10-13 16:15:29,668 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837338850/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 12:16:02] 2025-10-13 16:15:29,669 | INFO     | extracted standard info from prmon json
[2025-10-13 12:16:02] 2025-10-13 16:15:29,669 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 12:16:02] 2025-10-13 16:15:29,669 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 12:16:02] 2025-10-13 16:15:29,669 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 12:16:02] 2025-10-13 16:15:29,670 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 12:16:02] 2025-10-13 16:15:29,671 | INFO     | fitting pss+swap vs Time
[2025-10-13 12:16:02] 2025-10-13 16:15:29,671 | INFO     | sum of square deviations: 101843770.0
[2025-10-13 12:16:02] 2025-10-13 16:15:29,672 | INFO     | sum of deviations: -1419112784.0000002
[2025-10-13 12:16:02] 2025-10-13 16:15:29,672 | INFO     | mean x: 1760369921.0
[2025-10-13 12:16:02] 2025-10-13 16:15:29,672 | INFO     | mean y: 2704511.782608696
[2025-10-13 12:16:02] 2025-10-13 16:15:29,672 | INFO     | -- intersect: 24532073951.46626
[2025-10-13 12:16:02] 2025-10-13 16:15:29,672 | INFO     | intersect: 24532073951.46626
[2025-10-13 12:16:02] 2025-10-13 16:15:29,672 | INFO     | chi2: 0.10018307858109936
[2025-10-13 12:16:02] 2025-10-13 16:15:29,672 | INFO     | -- intersect: 24532073951.46626
[2025-10-13 12:16:02] 2025-10-13 16:15:29,673 | INFO     | current memory leak: -13.93 B/s (using 69 data points, chi2=0.10)
[2025-10-13 12:16:02] 2025-10-13 16:15:29,673 | INFO     | could have reported an average CPU frequency of 2034 MHz (6 samples)
[2025-10-13 12:16:02] 2025-10-13 16:15:29,673 | INFO     | ..............................
[2025-10-13 12:16:02] 2025-10-13 16:15:29,673 | INFO     | . Timing measurements:
[2025-10-13 12:16:02] 2025-10-13 16:15:29,673 | INFO     | . get job = 0 s
[2025-10-13 12:16:02] 2025-10-13 16:15:29,673 | INFO     | . initial setup = 2 s
[2025-10-13 12:16:02] 2025-10-13 16:15:29,673 | INFO     | . payload setup = 6 s
[2025-10-13 12:16:02] 2025-10-13 16:15:29,674 | INFO     | . stage-in = 0 s
[2025-10-13 12:16:02] 2025-10-13 16:15:29,674 | INFO     | . payload execution = 4582 s
[2025-10-13 12:16:02] 2025-10-13 16:15:29,674 | INFO     | . stage-out = 0 s
[2025-10-13 12:16:02] 2025-10-13 16:15:29,674 | INFO     | . log creation = 0 s
[2025-10-13 12:16:02] 2025-10-13 16:15:29,674 | INFO     | ..............................
[2025-10-13 12:16:02] 2025-10-13 16:15:29,757 | INFO     | 
[2025-10-13 12:16:02] 2025-10-13 16:15:29,757 | INFO     | job summary report
[2025-10-13 12:16:02] 2025-10-13 16:15:29,758 | INFO     | --------------------------------------------------
[2025-10-13 12:16:02] 2025-10-13 16:15:29,758 | INFO     | PanDA job id: 6837338850
[2025-10-13 12:16:02] 2025-10-13 16:15:29,758 | INFO     | task id: 46676269
[2025-10-13 12:16:02] 2025-10-13 16:15:29,758 | INFO     | errors: (none)
[2025-10-13 12:16:02] 2025-10-13 16:15:29,759 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 12:16:02] 2025-10-13 16:15:29,759 | INFO     | pilot state: finished 
[2025-10-13 12:16:02] 2025-10-13 16:15:29,759 | INFO     | transexitcode: 0
[2025-10-13 12:16:02] 2025-10-13 16:15:29,760 | INFO     | exeerrorcode: 0
[2025-10-13 12:16:02] 2025-10-13 16:15:29,760 | INFO     | exeerrordiag: 
[2025-10-13 12:16:02] 2025-10-13 16:15:29,760 | INFO     | exitcode: 0
[2025-10-13 12:16:02] 2025-10-13 16:15:29,761 | INFO     | exitmsg: OK
[2025-10-13 12:16:02] 2025-10-13 16:15:29,761 | INFO     | cpuconsumptiontime: 46930 s
[2025-10-13 12:16:02] 2025-10-13 16:15:29,761 | INFO     | nevents: 400
[2025-10-13 12:16:02] 2025-10-13 16:15:29,761 | INFO     | neventsw: 0
[2025-10-13 12:16:02] 2025-10-13 16:15:29,761 | INFO     | pid: 7542
[2025-10-13 12:16:02] 2025-10-13 16:15:29,762 | INFO     | pgrp: 7542
[2025-10-13 12:16:02] 2025-10-13 16:15:29,762 | INFO     | corecount: 12
[2025-10-13 12:16:02] 2025-10-13 16:15:29,762 | INFO     | event service: False
[2025-10-13 12:16:02] 2025-10-13 16:15:29,762 | INFO     | sizes: {0: 2348853, 5: 2349115, 11: 2349171, 4593: 2375301, 4595: 2384355, 4600: 2384493}
[2025-10-13 12:16:02] 2025-10-13 16:15:29,762 | INFO     | --------------------------------------------------
[2025-10-13 12:16:02] 2025-10-13 16:15:29,762 | INFO     | 
[2025-10-13 12:16:02] 2025-10-13 16:15:29,763 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 12:16:02] 2025-10-13 16:15:29,786 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 12:16:02] 2025-10-13 16:15:29,786 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 12:16:02] 2025-10-13 16:15:29,787 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 12:16:02] 2025-10-13 16:15:29,787 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 12:16:02] 2025-10-13 16:15:29,787 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 12:16:02] 2025-10-13 16:15:29,787 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 12:16:02] 2025-10-13 16:15:29,787 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 12:16:02] 2025-10-13 16:15:29,788 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 12:16:02] 2025-10-13 16:15:29,788 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 12:16:02] 2025-10-13 16:15:29,788 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 12:16:02] 2025-10-13 16:15:29,788 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 12:16:02] 2025-10-13 16:15:29,788 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 12:16:02] 2025-10-13 16:15:29,789 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 12:16:02] 2025-10-13 16:15:29,789 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 12:16:02] 2025-10-13 16:15:29,789 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 12:16:02] 2025-10-13 16:15:29,789 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 12:16:02] 2025-10-13 16:15:29,789 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 12:16:02] 2025-10-13 16:15:29,789 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 12:16:02] 2025-10-13 16:15:29,790 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 12:16:02] 2025-10-13 16:15:29,790 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 12:16:02] 2025-10-13 16:15:29,790 | INFO     | job 6837338850 has completed (purged errors)
[2025-10-13 12:16:02] 2025-10-13 16:15:29,790 | INFO     | overall cleanup function is called
[2025-10-13 12:16:02] 2025-10-13 16:15:29,885 | INFO     | PID=1014 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 12:16:02] 2025-10-13 16:15:30,798 | INFO     | --- collectZombieJob: --- 10, [7542]
[2025-10-13 12:16:02] 2025-10-13 16:15:30,799 | INFO     | zombie collector waiting for pid 7542
[2025-10-13 12:16:02] 2025-10-13 16:15:30,799 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 12:16:02] 2025-10-13 16:15:30,799 | INFO     | collected zombie processes
[2025-10-13 12:16:02] 2025-10-13 16:15:30,799 | INFO     | will attempt to kill all subprocesses of pid=7542
[2025-10-13 12:16:02] 2025-10-13 16:15:30,890 | INFO     | process IDs to be killed: [7542] (in reverse order)
[2025-10-13 12:16:02] 2025-10-13 16:15:30,939 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 12:16:02] 2025-10-13 16:15:30,940 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 12:16:02] 2025-10-13 16:15:30,943 | INFO     | did not find any defunct processes belonging to 7542
[2025-10-13 12:16:02] 2025-10-13 16:15:30,947 | INFO     | did not find any defunct processes belonging to 7542
[2025-10-13 12:16:02] 2025-10-13 16:15:30,947 | INFO     | ready for new job
[2025-10-13 12:16:02] 2025-10-13 16:15:30,948 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 12:16:02] 2025-10-13 16:15:30,949 | INFO     | ***************************************
[2025-10-13 12:16:02] 2025-10-13 16:15:30,949 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 12:16:02] 2025-10-13 16:15:30,949 | INFO     | ***************************************
[2025-10-13 12:16:02] 2025-10-13 16:15:30,949 | INFO     | 
[2025-10-13 12:16:02] 2025-10-13 16:15:30,950 | INFO     | architecture information:
[2025-10-13 12:16:02] 2025-10-13 16:15:30,950 | INFO     | executing command: cat /etc/os-release
[2025-10-13 12:16:02] 2025-10-13 16:15:30,965 | INFO     | cat /etc/os-release:
[2025-10-13 12:16:02] NAME="CentOS Linux"
[2025-10-13 12:16:02] VERSION="7 (Core)"
[2025-10-13 12:16:02] ID="centos"
[2025-10-13 12:16:02] ID_LIKE="rhel fedora"
[2025-10-13 12:16:02] VERSION_ID="7"
[2025-10-13 12:16:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:16:02] ANSI_COLOR="0;31"
[2025-10-13 12:16:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:16:02] HOME_URL="https://www.centos.org/"
[2025-10-13 12:16:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:16:02] 
[2025-10-13 12:16:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:16:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:16:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:16:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:16:02] 
[2025-10-13 12:16:02] 2025-10-13 16:15:30,965 | INFO     | ***************************************
[2025-10-13 12:16:02] 2025-10-13 16:15:31,467 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 12:16:02] 2025-10-13 16:15:31,484 | INFO     | sufficient remaining disk space (29362225152 B)
[2025-10-13 12:16:02] 2025-10-13 16:15:31,484 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:16:02] 2025-10-13 16:15:31,484 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:16:02] 2025-10-13 16:15:31,485 | INFO     | update_server=False
[2025-10-13 12:16:02] 2025-10-13 16:15:31,485 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:16:02] 2025-10-13 16:15:31,485 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:16:02] 2025-10-13 16:15:31,485 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:16:02] 2025-10-13 16:15:31,486 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:16:02] 2025-10-13 16:15:31,642 | INFO     | all job control threads have been joined
[2025-10-13 12:16:02] 2025-10-13 16:15:31,952 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:16:02] 2025-10-13 16:15:31,952 | INFO     | aborting loop
[2025-10-13 12:16:02] 2025-10-13 16:15:31,967 | INFO     | all data control threads have been joined
[2025-10-13 12:16:02] 2025-10-13 16:15:32,266 | INFO     | all payload control threads have been joined
[2025-10-13 12:16:02] 2025-10-13 16:15:32,490 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:16:02] 2025-10-13 16:15:32,491 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:16:02] 2025-10-13 16:15:32,546 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:16:02] 2025-10-13 16:15:32,602 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:16:02] 2025-10-13 16:15:32,643 | INFO     | [job] control thread has finished
[2025-10-13 12:16:02] 2025-10-13 16:15:32,812 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:16:02] 2025-10-13 16:15:32,958 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:16:02] 2025-10-13 16:15:32,972 | INFO     | [data] control thread has finished
[2025-10-13 12:16:02] 2025-10-13 16:15:33,268 | INFO     | [payload] control thread has finished
[2025-10-13 12:16:02] 2025-10-13 16:15:33,446 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:16:02] 2025-10-13 16:15:33,490 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:16:02] 2025-10-13 16:15:33,641 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:16:02] 2025-10-13 16:15:33,832 | INFO     | [job] validate thread has finished
[2025-10-13 12:16:02] 2025-10-13 16:15:33,932 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:16:02] 2025-10-13 16:15:35,491 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:16:02] 2025-10-13 16:15:40,279 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:16:02] 2025-10-13 16:15:41,630 | INFO     | job.realtimelogging is not enabled
[2025-10-13 12:16:02] 2025-10-13 16:15:42,636 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:16:02] 2025-10-13 16:15:43,846 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139770729547584)>', '<ExcThread(monitor, started 139770130831104)>']
[2025-10-13 12:16:02] 2025-10-13 16:15:48,872 | INFO     | all workflow threads have been joined
[2025-10-13 12:16:02] 2025-10-13 16:15:48,872 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:16:02] 2025-10-13 16:15:48,872 | INFO     | traces error code: 0
[2025-10-13 12:16:02] 2025-10-13 16:15:48,873 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:16:02] 2025-10-13 16:16:02,072 | INFO     | PID=1014 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 12:16:02] 2025-10-13 16:16:02,073 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:16:02] 2025-10-13 16:16:02,073 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:16:02] 2025-10-13 16:16:02,073 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:16:02] 2025-10-13 16:16:02,073 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:16:02] 2025-10-13 16:16:02,074 | INFO     | [monitor] control thread has ended
[2025-10-13 12:16:02] 2025-10-13 16:16:02,162 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:16:02] 2025-10-13 16:16:02,166 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:16:02] 2025-10-13 16:16:02,170 [wrapper] pilotpid: 1014
[2025-10-13 12:16:02] 2025-10-13 16:16:02,173 [wrapper] Pilot exit status: 0
[2025-10-13 12:16:02] 2025-10-13 16:16:02,188 [wrapper] pandaids: 6837338850
[2025-10-13 12:16:02] 2025-10-13 16:16:02,227 [wrapper] cleanup supervisor_pilot 30426 1015
[2025-10-13 12:16:02] 2025-10-13 16:16:02,231 [wrapper] Test setup, not cleaning
[2025-10-13 12:16:02] 2025-10-13 16:16:02,234 [wrapper] apfmon messages muted
[2025-10-13 12:16:02] 2025-10-13 16:16:02,238 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:16:02] 2025-10-13 16:16:02,242 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:16:02]  *** Error codes and diagnostics ***
[2025-10-13 12:16:02]     "exeErrorCode": 0,
[2025-10-13 12:16:02]     "exeErrorDiag": "",
[2025-10-13 12:16:02]     "pilotErrorCode": 0,
[2025-10-13 12:16:02]     "pilotErrorDiag": "",
[2025-10-13 12:16:02]  *** Listing of results directory ***
[2025-10-13 12:16:02] total 410552
[2025-10-13 12:16:02] -rw-r--r-- 1 boincer umatlas    557409 Oct  9 08:43 pilot3.tar.gz
[2025-10-13 12:16:02] -rwx------ 1 boincer umatlas     36292 Oct  9 08:48 runpilot2-wrapper.sh
[2025-10-13 12:16:02] -rw-r--r-- 1 boincer umatlas      5112 Oct  9 08:48 queuedata.json
[2025-10-13 12:16:02] -rw-r--r-- 1 boincer umatlas       100 Oct 13 10:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:16:02] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 10:58 run_atlas
[2025-10-13 12:16:02] -rw-r--r-- 1 boincer umatlas       105 Oct 13 10:58 job.xml
[2025-10-13 12:16:02] -rw-r--r-- 2 boincer umatlas 224735257 Oct 13 10:58 EVNT.46676267._000736.pool.root.1
[2025-10-13 12:16:02] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 10:58 start_atlas.sh
[2025-10-13 12:16:02] drwxrwx--x 2 boincer umatlas      4096 Oct 13 10:58 shared
[2025-10-13 12:16:02] -rw-r--r-- 2 boincer umatlas    569681 Oct 13 10:58 input.tar.gz
[2025-10-13 12:16:02] -rw-r--r-- 1 boincer umatlas         0 Oct 13 10:58 boinc_lockfile
[2025-10-13 12:16:02] -rw-r--r-- 1 boincer umatlas      2548 Oct 13 10:58 pandaJob.out
[2025-10-13 12:16:02] -rw------- 1 boincer umatlas    972791 Oct 13 10:58 agis_schedconf.cvmfs.json
[2025-10-13 12:16:02] -rw------- 1 boincer umatlas   1560580 Oct 13 10:58 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:16:02] drwx------ 5 boincer umatlas      4096 Oct 13 10:58 pilot3
[2025-10-13 12:16:02] -rw-r--r-- 1 boincer umatlas      5953 Oct 13 12:10 init_data.xml
[2025-10-13 12:16:02] -rw------- 1 boincer umatlas 189680703 Oct 13 12:14 HITS.46676269._017755.pool.root.1
[2025-10-13 12:16:02] -rw-r--r-- 1 boincer umatlas       529 Oct 13 12:15 boinc_task_state.xml
[2025-10-13 12:16:02] -rw------- 1 boincer umatlas      1046 Oct 13 12:15 memory_monitor_summary.json
[2025-10-13 12:16:02] -rw------- 1 boincer umatlas    373183 Oct 13 12:15 log.46676269._017755.job.log.tgz.1
[2025-10-13 12:16:02] -rw------- 1 boincer umatlas      7851 Oct 13 12:15 heartbeat.json
[2025-10-13 12:16:02] -rw-r--r-- 1 boincer umatlas        27 Oct 13 12:15 wrapper_checkpoint.txt
[2025-10-13 12:16:02] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 12:15 boinc_mmap_file
[2025-10-13 12:16:02] -rw------- 1 boincer umatlas       744 Oct 13 12:16 pilotlog.txt
[2025-10-13 12:16:02] -rw------- 1 boincer umatlas        95 Oct 13 12:16 pilot_heartbeat.json
[2025-10-13 12:16:02] -rw------- 1 boincer umatlas    668200 Oct 13 12:16 log.46676269._017755.job.log.1
[2025-10-13 12:16:02] -rw------- 1 boincer umatlas       357 Oct 13 12:16 output.list
[2025-10-13 12:16:02] -rw-r--r-- 1 boincer umatlas       620 Oct 13 12:16 runtime_log
[2025-10-13 12:16:02] -rw------- 1 boincer umatlas   1064960 Oct 13 12:16 result.tar.gz
[2025-10-13 12:16:02] -rw-r--r-- 1 boincer umatlas      8705 Oct 13 12:16 runtime_log.err
[2025-10-13 12:16:02] -rw------- 1 boincer umatlas       659 Oct 13 12:16 jVPKDmPF5Q8n9Rq4apOajLDm4fhM0noT9bVof3QYDmitNMDm2dXKRn.diag
[2025-10-13 12:16:02] -rw-r--r-- 1 boincer umatlas     21811 Oct 13 12:16 stderr.txt
[2025-10-13 12:16:02] HITS file was successfully produced:
[2025-10-13 12:16:02] -rw------- 1 boincer umatlas 189680703 Oct 13 12:14 shared/HITS.pool.root.1
[2025-10-13 12:16:02]  *** Contents of shared directory: ***
[2025-10-13 12:16:02] total 406332
[2025-10-13 12:16:02] -rw-r--r-- 2 boincer umatlas 224735257 Oct 13 10:58 ATLAS.root_0
[2025-10-13 12:16:02] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 10:58 start_atlas.sh
[2025-10-13 12:16:02] -rw-r--r-- 2 boincer umatlas    569681 Oct 13 10:58 input.tar.gz
[2025-10-13 12:16:02] -rw------- 1 boincer umatlas 189680703 Oct 13 12:14 HITS.pool.root.1
[2025-10-13 12:16:02] -rw------- 1 boincer umatlas   1064960 Oct 13 12:16 result.tar.gz
12:16:03 (29786): run_atlas exited; CPU time 46911.857208
12:16:03 (29786): called boinc_finish(0)

</stderr_txt>
]]>

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