Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
10:07:47 (793669): wrapper (7.7.26015): starting
10:07:47 (793669): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 10:07:47] Arguments: --nthreads 4
[2025-10-13 10:07:47] Threads: 4
[2025-10-13 10:07:47] Checking for CVMFS
[2025-10-13 10:07:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:07:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:07:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:07:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:07:47] 2.13.2.0 3732220 8113 60524 151662 0 188 2819777 4096000 11991 130560 0 56360271 99.999 405456 1247 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 10:07:47] CVMFS is ok
[2025-10-13 10:07:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 10:07:47] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 10:07:47] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 10:07:47] Further information can be found at the LHC@home message board.
[2025-10-13 10:07:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:07:47] Checking for apptainer binary...
[2025-10-13 10:07:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 10:07:47] Running /usr/bin/apptainer --version
[2025-10-13 10:07:47] apptainer version 1.4.3
[2025-10-13 10:07:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:07:48] T7810-Ubuntu
[2025-10-13 10:07:48] apptainer works
[2025-10-13 10:07:48] Set ATHENA_PROC_NUMBER=4
[2025-10-13 10:07:48] Set ATHENA_CORE_NUMBER=4
[2025-10-13 10:07:48] Starting ATLAS job with PandaID=6840750214
[2025-10-13 10:07:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:19:26]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:19:26] 2025-10-13 17:18:39,980 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 13:19:26] 2025-10-13 17:18:39,985 | INFO     | fitting pss+swap vs Time
[2025-10-13 13:19:26] 2025-10-13 17:18:39,985 | INFO     | sum of square deviations: 2027639878.0
[2025-10-13 13:19:26] 2025-10-13 17:18:39,986 | INFO     | sum of deviations: 34037189797.999996
[2025-10-13 13:19:26] 2025-10-13 17:18:39,987 | INFO     | mean x: 1760370180.0
[2025-10-13 13:19:26] 2025-10-13 17:18:39,987 | INFO     | mean y: 2279009.497326203
[2025-10-13 13:19:26] 2025-10-13 17:18:39,987 | INFO     | -- intersect: -29548359928.665943
[2025-10-13 13:19:26] 2025-10-13 17:18:39,987 | INFO     | intersect: -29548359928.665943
[2025-10-13 13:19:26] 2025-10-13 17:18:39,987 | INFO     | chi2: 1.5333103700511168
[2025-10-13 13:19:26] 2025-10-13 17:18:39,988 | INFO     | sum of square deviations: 1869302025.5
[2025-10-13 13:19:26] 2025-10-13 17:18:39,989 | INFO     | sum of deviations: 33069267570.500004
[2025-10-13 13:19:26] 2025-10-13 17:18:39,989 | INFO     | mean x: 1760370027.5
[2025-10-13 13:19:26] 2025-10-13 17:18:39,989 | INFO     | mean y: 2278077.0054945056
[2025-10-13 13:19:26] 2025-10-13 17:18:39,990 | INFO     | -- intersect: -31139905833.545216
[2025-10-13 13:19:26] 2025-10-13 17:18:39,990 | INFO     | intersect: -31139905833.545216
[2025-10-13 13:19:26] 2025-10-13 17:18:39,990 | INFO     | chi2: 1.533645511981037
[2025-10-13 13:19:26] 2025-10-13 17:18:39,990 | INFO     | current chi2=1.533645511981037 (change=-0.0218574097238423 %)
[2025-10-13 13:19:26] 2025-10-13 17:18:39,990 | INFO     | right removable region: 181
[2025-10-13 13:19:26] 2025-10-13 17:18:39,991 | INFO     | sum of square deviations: 1869302025.5
[2025-10-13 13:19:26] 2025-10-13 17:18:39,992 | INFO     | sum of deviations: 6618093343.500001
[2025-10-13 13:19:26] 2025-10-13 17:18:39,992 | INFO     | mean x: 1760370332.5
[2025-10-13 13:19:26] 2025-10-13 17:18:39,992 | INFO     | mean y: 2305109.653846154
[2025-10-13 13:19:26] 2025-10-13 17:18:39,992 | INFO     | -- intersect: -6230125509.20076
[2025-10-13 13:19:26] 2025-10-13 17:18:39,992 | INFO     | intersect: -6230125509.20076
[2025-10-13 13:19:26] 2025-10-13 17:18:39,993 | INFO     | chi2: 0.020140110111375932
[2025-10-13 13:19:26] 2025-10-13 17:18:39,993 | INFO     | current chi2=0.020140110111375932 (change=98.68649488683074 %)
[2025-10-13 13:19:26] 2025-10-13 17:18:39,993 | INFO     | sum of square deviations: 1719429448.0
[2025-10-13 13:19:26] 2025-10-13 17:18:39,994 | INFO     | sum of deviations: 3054264876.0000005
[2025-10-13 13:19:26] 2025-10-13 17:18:39,995 | INFO     | mean x: 1760370485.0
[2025-10-13 13:19:26] 2025-10-13 17:18:39,995 | INFO     | mean y: 2308704.062146893
[2025-10-13 13:19:26] 2025-10-13 17:18:39,995 | INFO     | -- intersect: -3124680744.290366
[2025-10-13 13:19:26] 2025-10-13 17:18:39,995 | INFO     | intersect: -3124680744.290366
[2025-10-13 13:19:26] 2025-10-13 17:18:39,995 | INFO     | chi2: 0.0008039703393767526
[2025-10-13 13:19:26] 2025-10-13 17:18:39,995 | INFO     | current chi2=0.0008039703393767526 (change=96.00811348631784 %)
[2025-10-13 13:19:26] 2025-10-13 17:18:39,996 | INFO     | sum of square deviations: 1577789583.0
[2025-10-13 13:19:26] 2025-10-13 17:18:39,997 | INFO     | sum of deviations: 2650921926.5000005
[2025-10-13 13:19:26] 2025-10-13 17:18:39,997 | INFO     | mean x: 1760370637.5
[2025-10-13 13:19:26] 2025-10-13 17:18:39,997 | INFO     | mean y: 2309142.5406976743
[2025-10-13 13:19:26] 2025-10-13 17:18:39,997 | INFO     | -- intersect: -2955376199.025874
[2025-10-13 13:19:26] 2025-10-13 17:18:39,997 | INFO     | intersect: -2955376199.025874
[2025-10-13 13:19:26] 2025-10-13 17:18:39,998 | INFO     | chi2: 0.000611452229965767
[2025-10-13 13:19:26] 2025-10-13 17:18:39,998 | INFO     | current chi2=0.000611452229965767 (change=23.945921880678824 %)
[2025-10-13 13:19:26] 2025-10-13 17:18:39,998 | INFO     | left removable region: 30
[2025-10-13 13:19:26] 2025-10-13 17:18:39,998 | INFO     | sum of square deviations: 1067554900.0
[2025-10-13 13:19:26] 2025-10-13 17:18:39,999 | INFO     | sum of deviations: 1320456507.9999988
[2025-10-13 13:19:26] 2025-10-13 17:18:39,999 | INFO     | mean x: 1760370912.0
[2025-10-13 13:19:26] 2025-10-13 17:18:40,000 | INFO     | mean y: 2310561.8874172186
[2025-10-13 13:19:26] 2025-10-13 17:18:40,000 | INFO     | -- intersect: -2175088677.4812493
[2025-10-13 13:19:26] 2025-10-13 17:18:40,000 | INFO     | intersect: -2175088677.4812493
[2025-10-13 13:19:26] 2025-10-13 17:18:40,000 | INFO     | chi2: 0.00026332516498241506
[2025-10-13 13:19:26] 2025-10-13 17:18:40,000 | INFO     | -- intersect: -2175088677.4812493
[2025-10-13 13:19:26] 2025-10-13 17:18:40,001 | INFO     | current memory leak: 1.24 B/s (using 151 data points, chi2=0.00)
[2025-10-13 13:19:26] 2025-10-13 17:18:40,001 | INFO     | could have reported an average CPU frequency of 2632 MHz (10 samples)
[2025-10-13 13:19:26] 2025-10-13 17:18:40,001 | INFO     | ..............................
[2025-10-13 13:19:26] 2025-10-13 17:18:40,001 | INFO     | . Timing measurements:
[2025-10-13 13:19:26] 2025-10-13 17:18:40,001 | INFO     | . get job = 0 s
[2025-10-13 13:19:26] 2025-10-13 17:18:40,002 | INFO     | . initial setup = 3 s
[2025-10-13 13:19:26] 2025-10-13 17:18:40,002 | INFO     | . payload setup = 5 s
[2025-10-13 13:19:26] 2025-10-13 17:18:40,002 | INFO     | . stage-in = 0 s
[2025-10-13 13:19:26] 2025-10-13 17:18:40,002 | INFO     | . payload execution = 11401 s
[2025-10-13 13:19:26] 2025-10-13 17:18:40,002 | INFO     | . stage-out = 2 s
[2025-10-13 13:19:26] 2025-10-13 17:18:40,002 | INFO     | . log creation = 0 s
[2025-10-13 13:19:26] 2025-10-13 17:18:40,002 | INFO     | ..............................
[2025-10-13 13:19:26] 2025-10-13 17:18:40,112 | INFO     | 
[2025-10-13 13:19:26] 2025-10-13 17:18:40,112 | INFO     | job summary report
[2025-10-13 13:19:26] 2025-10-13 17:18:40,112 | INFO     | --------------------------------------------------
[2025-10-13 13:19:26] 2025-10-13 17:18:40,112 | INFO     | PanDA job id: 6840750214
[2025-10-13 13:19:26] 2025-10-13 17:18:40,113 | INFO     | task id: 46676269
[2025-10-13 13:19:26] 2025-10-13 17:18:40,113 | INFO     | errors: (none)
[2025-10-13 13:19:26] 2025-10-13 17:18:40,113 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 13:19:26] 2025-10-13 17:18:40,113 | INFO     | pilot state: finished 
[2025-10-13 13:19:26] 2025-10-13 17:18:40,113 | INFO     | transexitcode: 0
[2025-10-13 13:19:26] 2025-10-13 17:18:40,113 | INFO     | exeerrorcode: 0
[2025-10-13 13:19:26] 2025-10-13 17:18:40,113 | INFO     | exeerrordiag: 
[2025-10-13 13:19:26] 2025-10-13 17:18:40,113 | INFO     | exitcode: 0
[2025-10-13 13:19:26] 2025-10-13 17:18:40,113 | INFO     | exitmsg: OK
[2025-10-13 13:19:26] 2025-10-13 17:18:40,114 | INFO     | cpuconsumptiontime: 44133 s
[2025-10-13 13:19:26] 2025-10-13 17:18:40,114 | INFO     | nevents: 400
[2025-10-13 13:19:26] 2025-10-13 17:18:40,114 | INFO     | neventsw: 0
[2025-10-13 13:19:26] 2025-10-13 17:18:40,114 | INFO     | pid: 822257
[2025-10-13 13:19:26] 2025-10-13 17:18:40,114 | INFO     | pgrp: 822257
[2025-10-13 13:19:26] 2025-10-13 17:18:40,114 | INFO     | corecount: 4
[2025-10-13 13:19:26] 2025-10-13 17:18:40,114 | INFO     | event service: False
[2025-10-13 13:19:26] 2025-10-13 17:18:40,114 | INFO     | sizes: {0: 2348701, 1: 2348900, 5: 2349162, 11: 2349218, 11411: 2378506, 11415: 2387534, 11416: 2387718, 11423: 2387912}
[2025-10-13 13:19:26] 2025-10-13 17:18:40,114 | INFO     | --------------------------------------------------
[2025-10-13 13:19:26] 2025-10-13 17:18:40,115 | INFO     | 
[2025-10-13 13:19:26] 2025-10-13 17:18:40,115 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/21
[2025-10-13 13:19:26] 2025-10-13 17:18:40,137 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 13:19:26] 2025-10-13 17:18:40,137 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 13:19:26] 2025-10-13 17:18:40,138 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 13:19:26] 2025-10-13 17:18:40,138 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 13:19:26] 2025-10-13 17:18:40,138 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 13:19:26] 2025-10-13 17:18:40,138 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 13:19:26] 2025-10-13 17:18:40,138 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 13:19:26] 2025-10-13 17:18:40,138 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 13:19:26] 2025-10-13 17:18:40,138 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 13:19:26] 2025-10-13 17:18:40,138 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 13:19:26] 2025-10-13 17:18:40,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 13:19:26] 2025-10-13 17:18:40,139 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 13:19:26] 2025-10-13 17:18:40,139 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 13:19:26] 2025-10-13 17:18:40,139 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 13:19:26] 2025-10-13 17:18:40,139 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 13:19:26] 2025-10-13 17:18:40,139 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 13:19:26] 2025-10-13 17:18:40,139 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 13:19:26] 2025-10-13 17:18:40,139 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 13:19:26] 2025-10-13 17:18:40,140 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 13:19:26] 2025-10-13 17:18:40,140 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 13:19:26] 2025-10-13 17:18:40,140 | INFO     | job 6840750214 has completed (purged errors)
[2025-10-13 13:19:26] 2025-10-13 17:18:40,140 | INFO     | overall cleanup function is called
[2025-10-13 13:19:26] 2025-10-13 17:18:41,149 | INFO     | --- collectZombieJob: --- 10, [822257]
[2025-10-13 13:19:26] 2025-10-13 17:18:41,149 | INFO     | zombie collector waiting for pid 822257
[2025-10-13 13:19:26] 2025-10-13 17:18:41,149 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 13:19:26] 2025-10-13 17:18:41,149 | INFO     | collected zombie processes
[2025-10-13 13:19:26] 2025-10-13 17:18:41,150 | INFO     | will attempt to kill all subprocesses of pid=822257
[2025-10-13 13:19:26] 2025-10-13 17:18:41,681 | INFO     | process IDs to be killed: [822257] (in reverse order)
[2025-10-13 13:19:26] 2025-10-13 17:18:41,798 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 13:19:26] 2025-10-13 17:18:41,798 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 13:19:26] 2025-10-13 17:18:41,810 | INFO     | did not find any defunct processes belonging to 822257
[2025-10-13 13:19:26] 2025-10-13 17:18:41,821 | INFO     | did not find any defunct processes belonging to 822257
[2025-10-13 13:19:26] 2025-10-13 17:18:41,822 | INFO     | ready for new job
[2025-10-13 13:19:26] 2025-10-13 17:18:41,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 13:19:26] 2025-10-13 17:18:41,824 | INFO     | ***************************************
[2025-10-13 13:19:26] 2025-10-13 17:18:41,824 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 13:19:26] 2025-10-13 17:18:41,824 | INFO     | ***************************************
[2025-10-13 13:19:26] 2025-10-13 17:18:41,824 | INFO     | 
[2025-10-13 13:19:26] 2025-10-13 17:18:41,828 | INFO     | architecture information:
[2025-10-13 13:19:26] 2025-10-13 17:18:41,828 | INFO     | executing command: cat /etc/os-release
[2025-10-13 13:19:26] 2025-10-13 17:18:41,842 | INFO     | cat /etc/os-release:
[2025-10-13 13:19:26] NAME="CentOS Linux"
[2025-10-13 13:19:26] VERSION="7 (Core)"
[2025-10-13 13:19:26] ID="centos"
[2025-10-13 13:19:26] ID_LIKE="rhel fedora"
[2025-10-13 13:19:26] VERSION_ID="7"
[2025-10-13 13:19:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 13:19:26] ANSI_COLOR="0;31"
[2025-10-13 13:19:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 13:19:26] HOME_URL="https://www.centos.org/"
[2025-10-13 13:19:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 13:19:26] 
[2025-10-13 13:19:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 13:19:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 13:19:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:19:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:19:26] 
[2025-10-13 13:19:26] 2025-10-13 17:18:41,842 | INFO     | ***************************************
[2025-10-13 13:19:26] 2025-10-13 17:18:42,345 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/21
[2025-10-13 13:19:26] 2025-10-13 17:18:42,361 | INFO     | sufficient remaining disk space (397975486464 B)
[2025-10-13 13:19:26] 2025-10-13 17:18:42,361 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:19:26] 2025-10-13 17:18:42,361 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:19:26] 2025-10-13 17:18:42,361 | INFO     | update_server=False
[2025-10-13 13:19:26] 2025-10-13 17:18:42,362 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:19:26] 2025-10-13 17:18:42,420 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 13:19:26] 2025-10-13 17:18:42,420 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 13:19:26] 2025-10-13 17:18:42,420 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:19:26] 2025-10-13 17:18:42,420 | INFO     | will abort loop
[2025-10-13 13:19:26] 2025-10-13 17:18:42,570 | INFO     | all data control threads have been joined
[2025-10-13 13:19:26] 2025-10-13 17:18:43,045 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:19:26] 2025-10-13 17:18:43,170 | INFO     | all payload control threads have been joined
[2025-10-13 13:19:26] 2025-10-13 17:18:43,172 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:19:26] 2025-10-13 17:18:43,367 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:19:26] 2025-10-13 17:18:43,425 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:19:26] 2025-10-13 17:18:43,575 | INFO     | [data] control thread has finished
[2025-10-13 13:19:26] 2025-10-13 17:18:43,619 | INFO     | all job control threads have been joined
[2025-10-13 13:19:26] 2025-10-13 17:18:43,634 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:19:26] 2025-10-13 17:18:43,811 | INFO     | [job] validate thread has finished
[2025-10-13 13:19:26] 2025-10-13 17:18:43,905 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:19:26] 2025-10-13 17:18:43,945 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:19:26] 2025-10-13 17:18:43,990 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:19:26] 2025-10-13 17:18:44,169 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:19:26] 2025-10-13 17:18:44,176 | INFO     | [payload] control thread has finished
[2025-10-13 13:19:26] 2025-10-13 17:18:44,392 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:19:26] 2025-10-13 17:18:44,624 | INFO     | [job] control thread has finished
[2025-10-13 13:19:26] 2025-10-13 17:18:44,924 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:19:26] 2025-10-13 17:18:45,050 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:19:26] 2025-10-13 17:18:45,121 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:19:26] 2025-10-13 17:18:46,126 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:19:26] 2025-10-13 17:18:47,178 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:19:26] 2025-10-13 17:19:12,074 | INFO     | PID=800273 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 13:19:26] 2025-10-13 17:19:12,074 | INFO     | .. there are 16 such processes running
[2025-10-13 13:19:26] 2025-10-13 17:19:12,074 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:19:26] 2025-10-13 17:19:12,075 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:19:26] 2025-10-13 17:19:12,075 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:19:26] 2025-10-13 17:19:19,311 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:19:26] 2025-10-13 17:19:21,091 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127613937219392)>', '<ExcThread(monitor, started 127613435619072)>']
[2025-10-13 13:19:26] 2025-10-13 17:19:21,116 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:19:26] 2025-10-13 17:19:21,116 | INFO     | [monitor] control thread has ended
[2025-10-13 13:19:26] 2025-10-13 17:19:26,116 | INFO     | all workflow threads have been joined
[2025-10-13 13:19:26] 2025-10-13 17:19:26,116 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:19:26] 2025-10-13 17:19:26,117 | INFO     | traces error code: 0
[2025-10-13 13:19:26] 2025-10-13 17:19:26,117 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:19:26] 2025-10-13 17:19:26,260 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:19:26] 2025-10-13 17:19:26,263 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:19:26] 2025-10-13 17:19:26,267 [wrapper] pilotpid: 800273
[2025-10-13 13:19:26] 2025-10-13 17:19:26,271 [wrapper] Pilot exit status: 0
[2025-10-13 13:19:26] 2025-10-13 17:19:26,281 [wrapper] pandaids: 6840750214
[2025-10-13 13:19:26] 2025-10-13 17:19:26,360 [wrapper] cleanup supervisor_pilot 1227202 800274
[2025-10-13 13:19:26] 2025-10-13 17:19:26,365 [wrapper] Test setup, not cleaning
[2025-10-13 13:19:26] 2025-10-13 17:19:26,369 [wrapper] apfmon messages muted
[2025-10-13 13:19:26] 2025-10-13 17:19:26,372 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:19:26] 2025-10-13 17:19:26,375 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:19:26]  *** Error codes and diagnostics ***
[2025-10-13 13:19:26]     "exeErrorCode": 0,
[2025-10-13 13:19:26]     "exeErrorDiag": "",
[2025-10-13 13:19:26]     "pilotErrorCode": 0,
[2025-10-13 13:19:26]     "pilotErrorDiag": "",
[2025-10-13 13:19:26]  *** Listing of results directory ***
[2025-10-13 13:19:26] total 408204
[2025-10-13 13:19:26] -rw-r--r-- 1 whitlerd whitlerd    557409 Oct 12 16:55 pilot3.tar.gz
[2025-10-13 13:19:26] -rw-r--r-- 1 whitlerd whitlerd      5112 Oct 12 17:07 queuedata.json
[2025-10-13 13:19:26] -rwx------ 1 whitlerd whitlerd     36292 Oct 12 17:09 runpilot2-wrapper.sh
[2025-10-13 13:19:26] -rw-rw-r-- 1 whitlerd whitlerd       100 Oct 13 10:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:19:26] -rwxr-xr-x 1 whitlerd whitlerd      7986 Oct 13 10:07 run_atlas
[2025-10-13 13:19:26] -rw-rw-r-- 1 whitlerd whitlerd       105 Oct 13 10:07 job.xml
[2025-10-13 13:19:26] -rw-r--r-- 2 whitlerd whitlerd 220019635 Oct 13 10:07 EVNT.46676267._004773.pool.root.1
[2025-10-13 13:19:26] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 13 10:07 start_atlas.sh
[2025-10-13 13:19:26] drwxrwx--x 2 whitlerd whitlerd      4096 Oct 13 10:07 shared
[2025-10-13 13:19:26] -rw-r--r-- 2 whitlerd whitlerd    569684 Oct 13 10:07 input.tar.gz
[2025-10-13 13:19:26] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 13 10:07 boinc_setup_complete
[2025-10-13 13:19:26] -rw-rw-r-- 1 whitlerd whitlerd      8957 Oct 13 10:07 init_data.xml
[2025-10-13 13:19:26] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 13 10:07 boinc_lockfile
[2025-10-13 13:19:26] -rw-rw-r-- 1 whitlerd whitlerd      2550 Oct 13 10:07 pandaJob.out
[2025-10-13 13:19:26] -rw------- 1 whitlerd whitlerd    972489 Oct 13 10:07 agis_schedconf.cvmfs.json
[2025-10-13 13:19:26] drwx------ 5 whitlerd whitlerd      4096 Oct 13 10:08 pilot3
[2025-10-13 13:19:26] -rw------- 1 whitlerd whitlerd 190074959 Oct 13 13:17 HITS.46676269._089593.pool.root.1
[2025-10-13 13:19:26] -rw-rw-r-- 1 whitlerd whitlerd       531 Oct 13 13:18 boinc_task_state.xml
[2025-10-13 13:19:26] -rw------- 1 whitlerd whitlerd        95 Oct 13 13:18 pilot_heartbeat.json
[2025-10-13 13:19:26] -rw------- 1 whitlerd whitlerd      1033 Oct 13 13:18 memory_monitor_summary.json
[2025-10-13 13:19:26] -rw------- 1 whitlerd whitlerd   1560580 Oct 13 13:18 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:19:26] -rw------- 1 whitlerd whitlerd    378035 Oct 13 13:18 log.46676269._089593.job.log.tgz.1
[2025-10-13 13:19:26] -rw------- 1 whitlerd whitlerd      7791 Oct 13 13:18 heartbeat.json
[2025-10-13 13:19:26] -rw-rw-r-- 1 whitlerd whitlerd      8192 Oct 13 13:19 boinc_mmap_file
[2025-10-13 13:19:26] -rw-rw-r-- 1 whitlerd whitlerd        28 Oct 13 13:19 wrapper_checkpoint.txt
[2025-10-13 13:19:26] -rw------- 1 whitlerd whitlerd      5025 Oct 13 13:19 pilotlog.txt
[2025-10-13 13:19:26] -rw------- 1 whitlerd whitlerd   1620893 Oct 13 13:19 log.46676269._089593.job.log.1
[2025-10-13 13:19:26] -rw------- 1 whitlerd whitlerd       357 Oct 13 13:19 output.list
[2025-10-13 13:19:26] -rw-rw-r-- 1 whitlerd whitlerd       620 Oct 13 13:19 runtime_log
[2025-10-13 13:19:26] -rw------- 1 whitlerd whitlerd   2017280 Oct 13 13:19 result.tar.gz
[2025-10-13 13:19:26] -rw-rw-r-- 1 whitlerd whitlerd      8893 Oct 13 13:19 runtime_log.err
[2025-10-13 13:19:26] -rw------- 1 whitlerd whitlerd       651 Oct 13 13:19 rffNDmoUIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3ZlNDmoE8mWn.diag
[2025-10-13 13:19:26] -rw-rw-r-- 1 whitlerd whitlerd     21053 Oct 13 13:19 stderr.txt
[2025-10-13 13:19:26] HITS file was successfully produced:
[2025-10-13 13:19:26] -rw------- 1 whitlerd whitlerd 190074959 Oct 13 13:17 shared/HITS.pool.root.1
[2025-10-13 13:19:26]  *** Contents of shared directory: ***
[2025-10-13 13:19:26] total 403044
[2025-10-13 13:19:26] -rw-r--r-- 2 whitlerd whitlerd 220019635 Oct 13 10:07 ATLAS.root_0
[2025-10-13 13:19:26] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 13 10:07 start_atlas.sh
[2025-10-13 13:19:26] -rw-r--r-- 2 whitlerd whitlerd    569684 Oct 13 10:07 input.tar.gz
[2025-10-13 13:19:26] -rw------- 1 whitlerd whitlerd 190074959 Oct 13 13:17 HITS.pool.root.1
[2025-10-13 13:19:26] -rw------- 1 whitlerd whitlerd   2017280 Oct 13 13:19 result.tar.gz
13:19:28 (793669): run_atlas exited; CPU time 44720.351620
13:19:28 (793669): called boinc_finish(0)

</stderr_txt>
]]>

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