Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:04:45 (1778679): wrapper (7.7.26015): starting
10:04:45 (1778679): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 10:04:45] Arguments: --nthreads 8
[2025-10-13 10:04:45] Threads: 8
[2025-10-13 10:04:45] Checking for CVMFS
[2025-10-13 10:04:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:04:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:04:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:04:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:04:47] 2.13.2.0 1652498 125354 159572 151662 1 373 37130803 40960000 21727 16776704 0 332543525 99.742 233063497 36155 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 10:04:47] CVMFS is ok
[2025-10-13 10:04:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 10:04:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 10:04:47] Further information can be found at the LHC@home message board.
[2025-10-13 10:04:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:04:47] Checking for apptainer binary...
[2025-10-13 10:04:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 10:04:47] Running /usr/bin/apptainer --version
[2025-10-13 10:04:47] apptainer version 1.4.3-1.el9
[2025-10-13 10:04:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:04:48] c-212-18.aglt2.org
[2025-10-13 10:04:48] apptainer works
[2025-10-13 10:04:48] Set ATHENA_PROC_NUMBER=8
[2025-10-13 10:04:48] Set ATHENA_CORE_NUMBER=8
[2025-10-13 10:04:48] Starting ATLAS job with PandaID=6831456674
[2025-10-13 10:04:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:46:58]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:46:58] 2025-10-13 16:46:18,356 | INFO     | -- intersect: -51435426849.73606
[2025-10-13 12:46:58] 2025-10-13 16:46:18,357 | INFO     | intersect: -51435426849.73606
[2025-10-13 12:46:58] 2025-10-13 16:46:18,357 | INFO     | chi2: 2.3228208998352726
[2025-10-13 12:46:58] 2025-10-13 16:46:18,357 | INFO     | sum of square deviations: 1088905998.0
[2025-10-13 12:46:58] 2025-10-13 16:46:18,364 | INFO     | sum of deviations: 33917645322.500008
[2025-10-13 12:46:58] 2025-10-13 16:46:18,365 | INFO     | mean x: 1760369007.5
[2025-10-13 12:46:58] 2025-10-13 16:46:18,365 | INFO     | mean y: 2490263.1513157897
[2025-10-13 12:46:58] 2025-10-13 16:46:18,365 | INFO     | -- intersect: -54830132334.91647
[2025-10-13 12:46:58] 2025-10-13 16:46:18,365 | INFO     | intersect: -54830132334.91647
[2025-10-13 12:46:58] 2025-10-13 16:46:18,366 | INFO     | chi2: 2.325077030121757
[2025-10-13 12:46:58] 2025-10-13 16:46:18,366 | INFO     | current chi2=2.325077030121757 (change=-0.0971288955874429 %)
[2025-10-13 12:46:58] 2025-10-13 16:46:18,366 | INFO     | right removable region: 151
[2025-10-13 12:46:58] 2025-10-13 16:46:18,366 | INFO     | sum of square deviations: 1088905998.0
[2025-10-13 12:46:58] 2025-10-13 16:46:18,367 | INFO     | sum of deviations: 38371928.00000051
[2025-10-13 12:46:58] 2025-10-13 16:46:18,367 | INFO     | mean x: 1760369312.5
[2025-10-13 12:46:58] 2025-10-13 16:46:18,367 | INFO     | mean y: 2539541.736842105
[2025-10-13 12:46:58] 2025-10-13 16:46:18,367 | INFO     | -- intersect: -59494063.21778907
[2025-10-13 12:46:58] 2025-10-13 16:46:18,367 | INFO     | intersect: -59494063.21778907
[2025-10-13 12:46:58] 2025-10-13 16:46:18,368 | INFO     | chi2: 0.10360211985514788
[2025-10-13 12:46:58] 2025-10-13 16:46:18,368 | INFO     | current chi2=0.10360211985514788 (change=95.53981454779853 %)
[2025-10-13 12:46:58] 2025-10-13 16:46:18,369 | INFO     | sum of square deviations: 984941258.0
[2025-10-13 12:46:58] 2025-10-13 16:46:18,370 | INFO     | sum of deviations: -4476623714.0
[2025-10-13 12:46:58] 2025-10-13 16:46:18,370 | INFO     | mean x: 1760369465.0
[2025-10-13 12:46:58] 2025-10-13 16:46:18,370 | INFO     | mean y: 2546166.5782312923
[2025-10-13 12:46:58] 2025-10-13 16:46:18,370 | INFO     | -- intersect: 8003542803.090836
[2025-10-13 12:46:58] 2025-10-13 16:46:18,370 | INFO     | intersect: 8003542803.090836
[2025-10-13 12:46:58] 2025-10-13 16:46:18,370 | INFO     | chi2: 0.05005698828974548
[2025-10-13 12:46:58] 2025-10-13 16:46:18,370 | INFO     | current chi2=0.05005698828974548 (change=51.68343238561812 %)
[2025-10-13 12:46:58] 2025-10-13 16:46:18,375 | INFO     | sum of square deviations: 887813855.5
[2025-10-13 12:46:58] 2025-10-13 16:46:18,376 | INFO     | sum of deviations: -6706607637.500003
[2025-10-13 12:46:58] 2025-10-13 16:46:18,376 | INFO     | mean x: 1760369617.5
[2025-10-13 12:46:58] 2025-10-13 16:46:18,376 | INFO     | mean y: 2549585.908450704
[2025-10-13 12:46:58] 2025-10-13 16:46:18,376 | INFO     | -- intersect: 13300504160.969099
[2025-10-13 12:46:58] 2025-10-13 16:46:18,376 | INFO     | intersect: 13300504160.969099
[2025-10-13 12:46:58] 2025-10-13 16:46:18,376 | INFO     | chi2: 0.018598839175956443
[2025-10-13 12:46:58] 2025-10-13 16:46:18,377 | INFO     | current chi2=0.018598839175956443 (change=62.84467002229428 %)
[2025-10-13 12:46:58] 2025-10-13 16:46:18,377 | INFO     | sum of square deviations: 797291228.0
[2025-10-13 12:46:58] 2025-10-13 16:46:18,377 | INFO     | sum of deviations: -6414965204.0
[2025-10-13 12:46:58] 2025-10-13 16:46:18,377 | INFO     | mean x: 1760369770.0
[2025-10-13 12:46:58] 2025-10-13 16:46:18,377 | INFO     | mean y: 2549087.00729927
[2025-10-13 12:46:58] 2025-10-13 16:46:18,378 | INFO     | -- intersect: 14166395902.494253
[2025-10-13 12:46:58] 2025-10-13 16:46:18,378 | INFO     | intersect: 14166395902.494253
[2025-10-13 12:46:58] 2025-10-13 16:46:18,378 | INFO     | chi2: 0.018226382627285882
[2025-10-13 12:46:58] 2025-10-13 16:46:18,378 | INFO     | current chi2=0.018226382627285882 (change=2.002579543523619 %)
[2025-10-13 12:46:58] 2025-10-13 16:46:18,378 | INFO     | left removable region: 40
[2025-10-13 12:46:58] 2025-10-13 16:46:18,378 | INFO     | sum of square deviations: 424045160.0
[2025-10-13 12:46:58] 2025-10-13 16:46:18,379 | INFO     | sum of deviations: -3186828855.999999
[2025-10-13 12:46:58] 2025-10-13 16:46:18,379 | INFO     | mean x: 1760370197.0
[2025-10-13 12:46:58] 2025-10-13 16:46:18,383 | INFO     | mean y: 2542732.225225225
[2025-10-13 12:46:58] 2025-10-13 16:46:18,383 | INFO     | -- intersect: 13232262276.818077
[2025-10-13 12:46:58] 2025-10-13 16:46:18,383 | INFO     | intersect: 13232262276.818077
[2025-10-13 12:46:58] 2025-10-13 16:46:18,383 | INFO     | chi2: 0.017247678832672756
[2025-10-13 12:46:58] 2025-10-13 16:46:18,384 | INFO     | -- intersect: 13232262276.818077
[2025-10-13 12:46:58] 2025-10-13 16:46:18,384 | INFO     | current memory leak: -7.52 B/s (using 111 data points, chi2=0.02)
[2025-10-13 12:46:58] 2025-10-13 16:46:18,384 | INFO     | could have reported an average CPU frequency of 3147 MHz (9 samples)
[2025-10-13 12:46:58] 2025-10-13 16:46:18,385 | INFO     | ..............................
[2025-10-13 12:46:58] 2025-10-13 16:46:18,385 | INFO     | . Timing measurements:
[2025-10-13 12:46:58] 2025-10-13 16:46:18,385 | INFO     | . get job = 0 s
[2025-10-13 12:46:58] 2025-10-13 16:46:18,385 | INFO     | . initial setup = 5 s
[2025-10-13 12:46:58] 2025-10-13 16:46:18,385 | INFO     | . payload setup = 19 s
[2025-10-13 12:46:58] 2025-10-13 16:46:18,385 | INFO     | . stage-in = 0 s
[2025-10-13 12:46:58] 2025-10-13 16:46:18,385 | INFO     | . payload execution = 9574 s
[2025-10-13 12:46:58] 2025-10-13 16:46:18,385 | INFO     | . stage-out = 0 s
[2025-10-13 12:46:58] 2025-10-13 16:46:18,385 | INFO     | . log creation = 0 s
[2025-10-13 12:46:58] 2025-10-13 16:46:18,385 | INFO     | ..............................
[2025-10-13 12:46:58] 2025-10-13 16:46:18,484 | INFO     | 
[2025-10-13 12:46:58] 2025-10-13 16:46:18,488 | INFO     | job summary report
[2025-10-13 12:46:58] 2025-10-13 16:46:18,489 | INFO     | --------------------------------------------------
[2025-10-13 12:46:58] 2025-10-13 16:46:18,489 | INFO     | PanDA job id: 6831456674
[2025-10-13 12:46:58] 2025-10-13 16:46:18,489 | INFO     | task id: 46376905
[2025-10-13 12:46:58] 2025-10-13 16:46:18,489 | INFO     | errors: (none)
[2025-10-13 12:46:58] 2025-10-13 16:46:18,489 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 12:46:58] 2025-10-13 16:46:18,489 | INFO     | pilot state: finished 
[2025-10-13 12:46:58] 2025-10-13 16:46:18,489 | INFO     | transexitcode: 0
[2025-10-13 12:46:58] 2025-10-13 16:46:18,489 | INFO     | exeerrorcode: 0
[2025-10-13 12:46:58] 2025-10-13 16:46:18,490 | INFO     | exeerrordiag: 
[2025-10-13 12:46:58] 2025-10-13 16:46:18,490 | INFO     | exitcode: 0
[2025-10-13 12:46:58] 2025-10-13 16:46:18,490 | INFO     | exitmsg: OK
[2025-10-13 12:46:58] 2025-10-13 16:46:18,490 | INFO     | cpuconsumptiontime: 33265 s
[2025-10-13 12:46:58] 2025-10-13 16:46:18,490 | INFO     | nevents: 400
[2025-10-13 12:46:58] 2025-10-13 16:46:18,490 | INFO     | neventsw: 0
[2025-10-13 12:46:58] 2025-10-13 16:46:18,490 | INFO     | pid: 1805779
[2025-10-13 12:46:58] 2025-10-13 16:46:18,490 | INFO     | pgrp: 1805779
[2025-10-13 12:46:58] 2025-10-13 16:46:18,490 | INFO     | corecount: 8
[2025-10-13 12:46:58] 2025-10-13 16:46:18,490 | INFO     | event service: False
[2025-10-13 12:46:58] 2025-10-13 16:46:18,490 | INFO     | sizes: {0: 2348589, 1: 2348673, 2: 2348872, 13: 2348872, 14: 2349190, 23: 2349218, 9598: 2377829, 9600: 2386827, 9601: 2386883, 9606: 2387141}
[2025-10-13 12:46:58] 2025-10-13 16:46:18,490 | INFO     | --------------------------------------------------
[2025-10-13 12:46:58] 2025-10-13 16:46:18,490 | INFO     | 
[2025-10-13 12:46:58] 2025-10-13 16:46:18,491 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 12:46:58] 2025-10-13 16:46:18,545 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 12:46:58] 2025-10-13 16:46:18,545 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 12:46:58] 2025-10-13 16:46:18,545 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 12:46:58] 2025-10-13 16:46:18,545 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 12:46:58] 2025-10-13 16:46:18,545 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 12:46:58] 2025-10-13 16:46:18,545 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 12:46:58] 2025-10-13 16:46:18,546 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 12:46:58] 2025-10-13 16:46:18,546 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 12:46:58] 2025-10-13 16:46:18,546 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 12:46:58] 2025-10-13 16:46:18,546 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 12:46:58] 2025-10-13 16:46:18,546 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 12:46:58] 2025-10-13 16:46:18,546 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 12:46:58] 2025-10-13 16:46:18,546 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 12:46:58] 2025-10-13 16:46:18,546 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 12:46:58] 2025-10-13 16:46:18,546 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 12:46:58] 2025-10-13 16:46:18,546 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 12:46:58] 2025-10-13 16:46:18,546 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 12:46:58] 2025-10-13 16:46:18,546 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 12:46:58] 2025-10-13 16:46:18,546 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 12:46:58] 2025-10-13 16:46:18,546 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 12:46:58] 2025-10-13 16:46:18,546 | INFO     | job 6831456674 has completed (purged errors)
[2025-10-13 12:46:58] 2025-10-13 16:46:18,546 | INFO     | overall cleanup function is called
[2025-10-13 12:46:58] 2025-10-13 16:46:19,566 | INFO     | --- collectZombieJob: --- 10, [1805779]
[2025-10-13 12:46:58] 2025-10-13 16:46:19,566 | INFO     | zombie collector waiting for pid 1805779
[2025-10-13 12:46:58] 2025-10-13 16:46:19,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 12:46:58] 2025-10-13 16:46:19,567 | INFO     | collected zombie processes
[2025-10-13 12:46:58] 2025-10-13 16:46:19,567 | INFO     | will attempt to kill all subprocesses of pid=1805779
[2025-10-13 12:46:58] 2025-10-13 16:46:20,131 | INFO     | process IDs to be killed: [1805779] (in reverse order)
[2025-10-13 12:46:58] 2025-10-13 16:46:20,281 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 12:46:58] 2025-10-13 16:46:20,283 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 12:46:58] 2025-10-13 16:46:20,326 | INFO     | did not find any defunct processes belonging to 1805779
[2025-10-13 12:46:58] 2025-10-13 16:46:20,367 | INFO     | did not find any defunct processes belonging to 1805779
[2025-10-13 12:46:58] 2025-10-13 16:46:20,367 | INFO     | ready for new job
[2025-10-13 12:46:58] 2025-10-13 16:46:20,372 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 12:46:58] 2025-10-13 16:46:20,375 | INFO     | ***************************************
[2025-10-13 12:46:58] 2025-10-13 16:46:20,375 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 12:46:58] 2025-10-13 16:46:20,375 | INFO     | ***************************************
[2025-10-13 12:46:58] 2025-10-13 16:46:20,376 | INFO     | 
[2025-10-13 12:46:58] 2025-10-13 16:46:20,382 | INFO     | architecture information:
[2025-10-13 12:46:58] 2025-10-13 16:46:20,383 | INFO     | executing command: cat /etc/os-release
[2025-10-13 12:46:58] 2025-10-13 16:46:20,416 | INFO     | cat /etc/os-release:
[2025-10-13 12:46:58] NAME="CentOS Linux"
[2025-10-13 12:46:58] VERSION="7 (Core)"
[2025-10-13 12:46:58] ID="centos"
[2025-10-13 12:46:58] ID_LIKE="rhel fedora"
[2025-10-13 12:46:58] VERSION_ID="7"
[2025-10-13 12:46:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:46:58] ANSI_COLOR="0;31"
[2025-10-13 12:46:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:46:58] HOME_URL="https://www.centos.org/"
[2025-10-13 12:46:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:46:58] 
[2025-10-13 12:46:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:46:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:46:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:46:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:46:58] 
[2025-10-13 12:46:58] 2025-10-13 16:46:20,416 | INFO     | ***************************************
[2025-10-13 12:46:58] 2025-10-13 16:46:20,920 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 12:46:58] 2025-10-13 16:46:20,951 | INFO     | sufficient remaining disk space (129417347072 B)
[2025-10-13 12:46:58] 2025-10-13 16:46:20,952 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:46:58] 2025-10-13 16:46:20,952 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:46:58] 2025-10-13 16:46:20,953 | INFO     | update_server=False
[2025-10-13 12:46:58] 2025-10-13 16:46:20,953 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:46:58] 2025-10-13 16:46:20,953 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:46:58] 2025-10-13 16:46:21,107 | INFO     | all job control threads have been joined
[2025-10-13 12:46:58] 2025-10-13 16:46:21,320 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:46:58] 2025-10-13 16:46:21,321 | INFO     | aborting loop
[2025-10-13 12:46:58] 2025-10-13 16:46:21,955 | INFO     | all data control threads have been joined
[2025-10-13 12:46:58] 2025-10-13 16:46:21,959 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:46:58] 2025-10-13 16:46:22,114 | INFO     | [job] control thread has finished
[2025-10-13 12:46:58] 2025-10-13 16:46:22,204 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:46:58] 2025-10-13 16:46:22,225 | INFO     | [job] validate thread has finished
[2025-10-13 12:46:58] 2025-10-13 16:46:22,264 | INFO     | all payload control threads have been joined
[2025-10-13 12:46:58] 2025-10-13 16:46:22,327 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:46:58] 2025-10-13 16:46:22,332 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:46:58] 2025-10-13 16:46:22,536 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:46:58] 2025-10-13 16:46:22,953 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:46:58] 2025-10-13 16:46:22,960 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:46:58] 2025-10-13 16:46:22,961 | INFO     | [data] control thread has finished
[2025-10-13 12:46:58] 2025-10-13 16:46:22,975 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:46:58] 2025-10-13 16:46:23,271 | INFO     | [payload] control thread has finished
[2025-10-13 12:46:58] 2025-10-13 16:46:23,361 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:46:58] 2025-10-13 16:46:23,394 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:46:58] 2025-10-13 16:46:23,482 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:46:58] 2025-10-13 16:46:23,496 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:46:58] 2025-10-13 16:46:24,502 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:46:58] 2025-10-13 16:46:27,492 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:46:58] 2025-10-13 16:46:51,743 | INFO     | PID=1782932 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 12:46:58] 2025-10-13 16:46:51,744 | INFO     | .. there are 20 such processes running
[2025-10-13 12:46:58] 2025-10-13 16:46:51,745 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:46:58] 2025-10-13 16:46:51,745 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:46:58] 2025-10-13 16:46:51,745 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:46:58] 2025-10-13 16:46:52,350 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:46:58] 2025-10-13 16:46:53,020 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139702674847552)>', '<ExcThread(monitor, started 139702183122688)>']
[2025-10-13 12:46:58] 2025-10-13 16:46:53,757 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:46:58] 2025-10-13 16:46:53,757 | INFO     | [monitor] control thread has ended
[2025-10-13 12:46:58] 2025-10-13 16:46:58,046 | INFO     | all workflow threads have been joined
[2025-10-13 12:46:58] 2025-10-13 16:46:58,047 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:46:58] 2025-10-13 16:46:58,047 | INFO     | traces error code: 0
[2025-10-13 12:46:58] 2025-10-13 16:46:58,047 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:46:58] 2025-10-13 16:46:58,347 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:46:58] 2025-10-13 16:46:58,354 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:46:58] 2025-10-13 16:46:58,359 [wrapper] pilotpid: 1782932
[2025-10-13 12:46:58] 2025-10-13 16:46:58,362 [wrapper] Pilot exit status: 0
[2025-10-13 12:46:58] 2025-10-13 16:46:58,380 [wrapper] pandaids: 6831456674
[2025-10-13 12:46:58] 2025-10-13 16:46:58,446 [wrapper] cleanup supervisor_pilot 2269688 1782933
[2025-10-13 12:46:58] 2025-10-13 16:46:58,450 [wrapper] Test setup, not cleaning
[2025-10-13 12:46:58] 2025-10-13 16:46:58,457 [wrapper] apfmon messages muted
[2025-10-13 12:46:58] 2025-10-13 16:46:58,461 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:46:58] 2025-10-13 16:46:58,463 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:46:58]  *** Error codes and diagnostics ***
[2025-10-13 12:46:58]     "exeErrorCode": 0,
[2025-10-13 12:46:58]     "exeErrorDiag": "",
[2025-10-13 12:46:58]     "pilotErrorCode": 0,
[2025-10-13 12:46:58]     "pilotErrorDiag": "",
[2025-10-13 12:46:58]  *** Listing of results directory ***
[2025-10-13 12:46:58] total 392492
[2025-10-13 12:46:58] -rw-r--r--. 1 boincer umatlas    552446 Oct  5 08:41 pilot3.tar.gz
[2025-10-13 12:46:58] -rw-r--r--. 1 boincer umatlas      5112 Oct  5 08:47 queuedata.json
[2025-10-13 12:46:58] -rwx------. 1 boincer umatlas     36292 Oct  5 08:47 runpilot2-wrapper.sh
[2025-10-13 12:46:58] -rw-r--r--. 1 boincer umatlas       100 Oct 13 10:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:46:58] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 10:04 run_atlas
[2025-10-13 12:46:58] -rw-r--r--. 1 boincer umatlas       105 Oct 13 10:04 job.xml
[2025-10-13 12:46:58] -rw-r--r--. 2 boincer umatlas 213499912 Oct 13 10:04 EVNT.46376901._003107.pool.root.1
[2025-10-13 12:46:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 10:04 start_atlas.sh
[2025-10-13 12:46:58] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 10:04 shared
[2025-10-13 12:46:58] -rw-r--r--. 2 boincer umatlas    565606 Oct 13 10:04 input.tar.gz
[2025-10-13 12:46:58] -rw-r--r--. 1 boincer umatlas         0 Oct 13 10:04 boinc_lockfile
[2025-10-13 12:46:58] -rw-r--r--. 1 boincer umatlas      2519 Oct 13 10:04 pandaJob.out
[2025-10-13 12:46:58] -rw-------. 1 boincer umatlas    972489 Oct 13 10:05 agis_schedconf.cvmfs.json
[2025-10-13 12:46:58] -rw-------. 1 boincer umatlas   1560580 Oct 13 10:05 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:46:58] drwx------. 4 boincer umatlas      4096 Oct 13 10:05 pilot3
[2025-10-13 12:46:58] -rw-r--r--. 1 boincer umatlas      6946 Oct 13 12:39 init_data.xml
[2025-10-13 12:46:58] -rw-------. 1 boincer umatlas 181094202 Oct 13 12:45 HITS.46376905._084639.pool.root.1
[2025-10-13 12:46:58] -rw-r--r--. 1 boincer umatlas       530 Oct 13 12:45 boinc_task_state.xml
[2025-10-13 12:46:58] -rw-------. 1 boincer umatlas      1042 Oct 13 12:46 memory_monitor_summary.json
[2025-10-13 12:46:58] -rw-------. 1 boincer umatlas    398216 Oct 13 12:46 log.46376905._084639.job.log.tgz.1
[2025-10-13 12:46:58] -rw-------. 1 boincer umatlas      7798 Oct 13 12:46 heartbeat.json
[2025-10-13 12:46:58] -rw-------. 1 boincer umatlas        95 Oct 13 12:46 pilot_heartbeat.json
[2025-10-13 12:46:58] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 12:46 boinc_mmap_file
[2025-10-13 12:46:58] -rw-r--r--. 1 boincer umatlas        27 Oct 13 12:46 wrapper_checkpoint.txt
[2025-10-13 12:46:58] -rw-------. 1 boincer umatlas      4825 Oct 13 12:46 pilotlog.txt
[2025-10-13 12:46:58] -rw-------. 1 boincer umatlas   1312147 Oct 13 12:46 log.46376905._084639.job.log.1
[2025-10-13 12:46:58] -rw-------. 1 boincer umatlas       357 Oct 13 12:46 output.list
[2025-10-13 12:46:58] -rw-r--r--. 1 boincer umatlas       620 Oct 13 12:46 runtime_log
[2025-10-13 12:46:58] -rw-------. 1 boincer umatlas   1730560 Oct 13 12:46 result.tar.gz
[2025-10-13 12:46:58] -rw-r--r--. 1 boincer umatlas      8703 Oct 13 12:46 runtime_log.err
[2025-10-13 12:46:58] -rw-------. 1 boincer umatlas       657 Oct 13 12:46 KV5KDmaKdP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmRHGMDm66Fmvn.diag
[2025-10-13 12:46:58] -rw-r--r--. 1 boincer umatlas     20940 Oct 13 12:46 stderr.txt
[2025-10-13 12:46:58] HITS file was successfully produced:
[2025-10-13 12:46:58] -rw-------. 1 boincer umatlas 181094202 Oct 13 12:45 shared/HITS.pool.root.1
[2025-10-13 12:46:58]  *** Contents of shared directory: ***
[2025-10-13 12:46:58] total 387624
[2025-10-13 12:46:58] -rw-r--r--. 2 boincer umatlas 213499912 Oct 13 10:04 ATLAS.root_0
[2025-10-13 12:46:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 10:04 start_atlas.sh
[2025-10-13 12:46:58] -rw-r--r--. 2 boincer umatlas    565606 Oct 13 10:04 input.tar.gz
[2025-10-13 12:46:58] -rw-------. 1 boincer umatlas 181094202 Oct 13 12:45 HITS.pool.root.1
[2025-10-13 12:46:58] -rw-------. 1 boincer umatlas   1730560 Oct 13 12:46 result.tar.gz
12:47:00 (1778679): run_atlas exited; CPU time 33552.023212
12:47:00 (1778679): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN