Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:47:42 (3791060): wrapper (7.7.26015): starting
09:47:42 (3791060): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 09:47:42] Arguments: --nthreads 8
[2025-10-13 09:47:42] Threads: 8
[2025-10-13 09:47:42] Checking for CVMFS
[2025-10-13 09:47:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:47:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:47:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:47:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:47:42] 2.13.1.0 4140 5757 91620 151662 0 57 36542295 39288833 198 16776704 0 18826741 99.998 195519 35477 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 09:47:42] CVMFS is ok
[2025-10-13 09:47:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:47:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:47:42] Further information can be found at the LHC@home message board.
[2025-10-13 09:47:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:47:42] Checking for apptainer binary...
[2025-10-13 09:47:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:47:42] Running /usr/bin/apptainer --version
[2025-10-13 09:47:42] apptainer version 1.4.3-1.el9
[2025-10-13 09:47:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:47:43] c-210-16.aglt2.org
[2025-10-13 09:47:43] apptainer works
[2025-10-13 09:47:43] Set ATHENA_PROC_NUMBER=8
[2025-10-13 09:47:43] Set ATHENA_CORE_NUMBER=8
[2025-10-13 09:47:43] Starting ATLAS job with PandaID=6840850862
[2025-10-13 09:47:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:49:14]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:49:14]  mtime=0
[2025-10-13 10:49:14]  protocol_id=None
[2025-10-13 10:49:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 10:49:14]  replicas=None
[2025-10-13 10:49:14]  scope=mc23_13p6TeV
[2025-10-13 10:49:14]  status=None
[2025-10-13 10:49:14]  status_code=0
[2025-10-13 10:49:14]  storage_token=
[2025-10-13 10:49:14]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840850862/log.46676269._090810.job.log.tgz.1
[2025-10-13 10:49:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/77/log.46676269._090810.job.log.tgz.1
[2025-10-13 10:49:14]  workdir=None
[2025-10-13 10:49:14] ]
[2025-10-13 10:49:14] 2025-10-13 14:48:37,425 | INFO     | transferring file log.46676269._090810.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840850862/log.46676269._090810.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 10:49:14] 2025-10-13 14:48:37,425 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840850862/log.46676269._090810.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._090810.job
[2025-10-13 10:49:14] 2025-10-13 14:48:37,435 | INFO     | adding to output.list: log.46676269._090810.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/77/log.46676269._090810.job.log.tg
[2025-10-13 10:49:14] 2025-10-13 14:48:37,436 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 10:49:14] 2025-10-13 14:48:37,436 | INFO     | summary of transferred files:
[2025-10-13 10:49:14] 2025-10-13 14:48:37,436 | INFO     |  -- lfn=log.46676269._090810.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 10:49:14] 2025-10-13 14:48:37,436 | INFO     | stage-out finished correctly
[2025-10-13 10:49:14] 2025-10-13 14:48:38,873 | INFO     | time since job start (3649s) is within the limit (172800.0s)
[2025-10-13 10:49:14] 2025-10-13 14:48:39,041 | INFO     | monitor loop #281: job 0:6840850862 is in state 'finished'
[2025-10-13 10:49:14] 2025-10-13 14:48:39,041 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:49:14] 2025-10-13 14:48:39,062 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 10:49:14] 2025-10-13 14:48:40,652 | INFO     | job 6840850862 has state=finished
[2025-10-13 10:49:14] 2025-10-13 14:48:40,652 | INFO     | preparing for final server update for job 6840850862 in state='finished'
[2025-10-13 10:49:14] 2025-10-13 14:48:40,653 | INFO     | this job has now completed (state=finished)
[2025-10-13 10:49:14] 2025-10-13 14:48:40,653 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 10:49:14] 2025-10-13 14:48:40,653 | INFO     | log transfer has been attempted: DONE
[2025-10-13 10:49:14] 2025-10-13 14:48:40,653 | INFO     | job 6840850862 has finished - writing final server update
[2025-10-13 10:49:14] 2025-10-13 14:48:40,653 | INFO     | total number of processed events: 400 (read)
[2025-10-13 10:49:14] 2025-10-13 14:48:40,653 | INFO     | executing command: lscpu
[2025-10-13 10:49:14] 2025-10-13 14:48:40,676 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 10:49:14] 2025-10-13 14:48:40,878 | INFO     | time since job start (3651s) is within the limit (172800.0s)
[2025-10-13 10:49:14] 2025-10-13 14:48:41,543 | INFO     | monitor loop #282: job 0:6840850862 is in state 'finished'
[2025-10-13 10:49:14] 2025-10-13 14:48:41,543 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:49:14] 2025-10-13 14:48:42,766 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 10:49:14] 2025-10-13 14:48:42,770 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2767.329575
[2025-10-13 10:49:14] 2025-10-13 14:48:42,774 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840850862/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 10:49:14] 2025-10-13 14:48:42,775 | INFO     | extracted standard info from prmon json
[2025-10-13 10:49:14] 2025-10-13 14:48:42,775 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 10:49:14] 2025-10-13 14:48:42,775 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 10:49:14] 2025-10-13 14:48:42,775 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 10:49:14] 2025-10-13 14:48:42,775 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:49:14] 2025-10-13 14:48:42,776 | INFO     | fitting pss+swap vs Time
[2025-10-13 10:49:14] 2025-10-13 14:48:42,776 | INFO     | sum of square deviations: 46147842.0
[2025-10-13 10:49:14] 2025-10-13 14:48:42,777 | INFO     | sum of deviations: -6519946448.0
[2025-10-13 10:49:14] 2025-10-13 14:48:42,777 | INFO     | mean x: 1760365180.0
[2025-10-13 10:49:14] 2025-10-13 14:48:42,777 | INFO     | mean y: 2677127.2075471696
[2025-10-13 10:49:14] 2025-10-13 14:48:42,777 | INFO     | -- intersect: 248713910526.2445
[2025-10-13 10:49:14] 2025-10-13 14:48:42,777 | INFO     | intersect: 248713910526.2445
[2025-10-13 10:49:14] 2025-10-13 14:48:42,777 | INFO     | chi2: 0.1002086045830083
[2025-10-13 10:49:14] 2025-10-13 14:48:42,777 | INFO     | -- intersect: 248713910526.2445
[2025-10-13 10:49:14] 2025-10-13 14:48:42,777 | INFO     | current memory leak: -141.28 B/s (using 53 data points, chi2=0.10)
[2025-10-13 10:49:14] 2025-10-13 14:48:42,777 | INFO     | could have reported an average CPU frequency of 2824 MHz (6 samples)
[2025-10-13 10:49:14] 2025-10-13 14:48:42,777 | INFO     | ..............................
[2025-10-13 10:49:14] 2025-10-13 14:48:42,777 | INFO     | . Timing measurements:
[2025-10-13 10:49:14] 2025-10-13 14:48:42,778 | INFO     | . get job = 0 s
[2025-10-13 10:49:14] 2025-10-13 14:48:42,778 | INFO     | . initial setup = 2 s
[2025-10-13 10:49:14] 2025-10-13 14:48:42,778 | INFO     | . payload setup = 3 s
[2025-10-13 10:49:14] 2025-10-13 14:48:42,778 | INFO     | . stage-in = 0 s
[2025-10-13 10:49:14] 2025-10-13 14:48:42,778 | INFO     | . payload execution = 3627 s
[2025-10-13 10:49:14] 2025-10-13 14:48:42,778 | INFO     | . stage-out = 0 s
[2025-10-13 10:49:14] 2025-10-13 14:48:42,778 | INFO     | . log creation = 0 s
[2025-10-13 10:49:14] 2025-10-13 14:48:42,778 | INFO     | ..............................
[2025-10-13 10:49:14] 2025-10-13 14:48:42,833 | INFO     | 
[2025-10-13 10:49:14] 2025-10-13 14:48:42,833 | INFO     | job summary report
[2025-10-13 10:49:14] 2025-10-13 14:48:42,833 | INFO     | --------------------------------------------------
[2025-10-13 10:49:14] 2025-10-13 14:48:42,833 | INFO     | PanDA job id: 6840850862
[2025-10-13 10:49:14] 2025-10-13 14:48:42,833 | INFO     | task id: 46676269
[2025-10-13 10:49:14] 2025-10-13 14:48:42,833 | INFO     | errors: (none)
[2025-10-13 10:49:14] 2025-10-13 14:48:42,833 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:49:14] 2025-10-13 14:48:42,833 | INFO     | pilot state: finished 
[2025-10-13 10:49:14] 2025-10-13 14:48:42,834 | INFO     | transexitcode: 0
[2025-10-13 10:49:14] 2025-10-13 14:48:42,834 | INFO     | exeerrorcode: 0
[2025-10-13 10:49:14] 2025-10-13 14:48:42,834 | INFO     | exeerrordiag: 
[2025-10-13 10:49:14] 2025-10-13 14:48:42,834 | INFO     | exitcode: 0
[2025-10-13 10:49:14] 2025-10-13 14:48:42,834 | INFO     | exitmsg: OK
[2025-10-13 10:49:14] 2025-10-13 14:48:42,834 | INFO     | cpuconsumptiontime: 26797 s
[2025-10-13 10:49:14] 2025-10-13 14:48:42,834 | INFO     | nevents: 400
[2025-10-13 10:49:14] 2025-10-13 14:48:42,834 | INFO     | neventsw: 0
[2025-10-13 10:49:14] 2025-10-13 14:48:42,834 | INFO     | pid: 3801423
[2025-10-13 10:49:14] 2025-10-13 14:48:42,834 | INFO     | pgrp: 3801423
[2025-10-13 10:49:14] 2025-10-13 14:48:42,834 | INFO     | corecount: 8
[2025-10-13 10:49:14] 2025-10-13 14:48:42,834 | INFO     | event service: False
[2025-10-13 10:49:14] 2025-10-13 14:48:42,834 | INFO     | sizes: {0: 2348857, 2: 2349119, 11: 2349147, 3633: 2374959, 3634: 2383957, 3636: 2384013, 3640: 2384335}
[2025-10-13 10:49:14] 2025-10-13 14:48:42,834 | INFO     | --------------------------------------------------
[2025-10-13 10:49:14] 2025-10-13 14:48:42,834 | INFO     | 
[2025-10-13 10:49:14] 2025-10-13 14:48:42,834 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 10:49:14] 2025-10-13 14:48:42,845 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:49:14] 2025-10-13 14:48:42,845 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:49:14] 2025-10-13 14:48:42,845 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:49:14] 2025-10-13 14:48:42,845 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:49:14] 2025-10-13 14:48:42,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:49:14] 2025-10-13 14:48:42,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:49:14] 2025-10-13 14:48:42,846 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:49:14] 2025-10-13 14:48:42,846 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:49:14] 2025-10-13 14:48:42,846 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:49:14] 2025-10-13 14:48:42,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:49:14] 2025-10-13 14:48:42,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:49:14] 2025-10-13 14:48:42,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:49:14] 2025-10-13 14:48:42,846 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:49:14] 2025-10-13 14:48:42,846 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:49:14] 2025-10-13 14:48:42,846 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:49:14] 2025-10-13 14:48:42,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:49:14] 2025-10-13 14:48:42,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:49:14] 2025-10-13 14:48:42,846 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:49:14] 2025-10-13 14:48:42,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:49:14] 2025-10-13 14:48:42,846 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:49:14] 2025-10-13 14:48:42,846 | INFO     | job 6840850862 has completed (purged errors)
[2025-10-13 10:49:14] 2025-10-13 14:48:42,847 | INFO     | overall cleanup function is called
[2025-10-13 10:49:14] 2025-10-13 14:48:43,853 | INFO     | --- collectZombieJob: --- 10, [3801423]
[2025-10-13 10:49:14] 2025-10-13 14:48:43,854 | INFO     | zombie collector waiting for pid 3801423
[2025-10-13 10:49:14] 2025-10-13 14:48:43,854 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:49:14] 2025-10-13 14:48:43,854 | INFO     | collected zombie processes
[2025-10-13 10:49:14] 2025-10-13 14:48:43,854 | INFO     | will attempt to kill all subprocesses of pid=3801423
[2025-10-13 10:49:14] 2025-10-13 14:48:43,962 | INFO     | process IDs to be killed: [3801423] (in reverse order)
[2025-10-13 10:49:14] 2025-10-13 14:48:43,992 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:49:14] 2025-10-13 14:48:43,992 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:49:14] 2025-10-13 14:48:43,994 | INFO     | did not find any defunct processes belonging to 3801423
[2025-10-13 10:49:14] 2025-10-13 14:48:43,997 | INFO     | did not find any defunct processes belonging to 3801423
[2025-10-13 10:49:14] 2025-10-13 14:48:43,997 | INFO     | ready for new job
[2025-10-13 10:49:14] 2025-10-13 14:48:43,997 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:49:14] 2025-10-13 14:48:43,998 | INFO     | ***************************************
[2025-10-13 10:49:14] 2025-10-13 14:48:43,998 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 10:49:14] 2025-10-13 14:48:43,998 | INFO     | ***************************************
[2025-10-13 10:49:14] 2025-10-13 14:48:43,998 | INFO     | 
[2025-10-13 10:49:14] 2025-10-13 14:48:44,000 | INFO     | architecture information:
[2025-10-13 10:49:14] 2025-10-13 14:48:44,000 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:49:14] 2025-10-13 14:48:44,006 | INFO     | cat /etc/os-release:
[2025-10-13 10:49:14] NAME="CentOS Linux"
[2025-10-13 10:49:14] VERSION="7 (Core)"
[2025-10-13 10:49:14] ID="centos"
[2025-10-13 10:49:14] ID_LIKE="rhel fedora"
[2025-10-13 10:49:14] VERSION_ID="7"
[2025-10-13 10:49:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:49:14] ANSI_COLOR="0;31"
[2025-10-13 10:49:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:49:14] HOME_URL="https://www.centos.org/"
[2025-10-13 10:49:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:49:14] 
[2025-10-13 10:49:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:49:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:49:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:49:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:49:14] 
[2025-10-13 10:49:14] 2025-10-13 14:48:44,006 | INFO     | ***************************************
[2025-10-13 10:49:14] 2025-10-13 14:48:44,509 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 10:49:14] 2025-10-13 14:48:44,515 | INFO     | sufficient remaining disk space (52680458240 B)
[2025-10-13 10:49:14] 2025-10-13 14:48:44,516 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:49:14] 2025-10-13 14:48:44,516 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:49:14] 2025-10-13 14:48:44,516 | INFO     | update_server=False
[2025-10-13 10:49:14] 2025-10-13 14:48:44,516 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:49:14] 2025-10-13 14:48:44,516 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:49:14] 2025-10-13 14:48:44,928 | INFO     | all data control threads have been joined
[2025-10-13 10:49:14] 2025-10-13 14:48:45,051 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:49:14] 2025-10-13 14:48:45,051 | INFO     | aborting loop
[2025-10-13 10:49:14] 2025-10-13 14:48:45,119 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:49:14] 2025-10-13 14:48:45,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:49:14] 2025-10-13 14:48:45,521 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:49:14] 2025-10-13 14:48:45,522 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:49:14] 2025-10-13 14:48:45,637 | INFO     | all payload control threads have been joined
[2025-10-13 10:49:14] 2025-10-13 14:48:45,765 | INFO     | all job control threads have been joined
[2025-10-13 10:49:14] 2025-10-13 14:48:45,933 | INFO     | [data] control thread has finished
[2025-10-13 10:49:14] 2025-10-13 14:48:46,056 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:49:14] 2025-10-13 14:48:46,335 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:49:14] 2025-10-13 14:48:46,355 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:49:14] 2025-10-13 14:48:46,536 | INFO     | [job] validate thread has finished
[2025-10-13 10:49:14] 2025-10-13 14:48:46,582 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:49:14] 2025-10-13 14:48:46,596 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:49:14] 2025-10-13 14:48:46,642 | INFO     | [payload] control thread has finished
[2025-10-13 10:49:14] 2025-10-13 14:48:46,734 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:49:14] 2025-10-13 14:48:46,770 | INFO     | [job] control thread has finished
[2025-10-13 10:49:14] 2025-10-13 14:48:47,071 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:49:14] 2025-10-13 14:48:47,502 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:49:14] 2025-10-13 14:48:49,124 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:49:14] 2025-10-13 14:48:54,645 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:49:14] 2025-10-13 14:48:54,868 | INFO     | job.realtimelogging is not enabled
[2025-10-13 10:49:14] 2025-10-13 14:48:55,874 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:49:14] 2025-10-13 14:48:56,017 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139749240117056)>', '<ExcThread(monitor, started 139748739888896)>']
[2025-10-13 10:49:14] 2025-10-13 14:49:01,042 | INFO     | all workflow threads have been joined
[2025-10-13 10:49:14] 2025-10-13 14:49:01,043 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:49:14] 2025-10-13 14:49:01,043 | INFO     | traces error code: 0
[2025-10-13 10:49:14] 2025-10-13 14:49:01,043 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:49:14] 2025-10-13 14:49:14,082 | INFO     | PID=3794754 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 10:49:14] 2025-10-13 14:49:14,082 | INFO     | .. there are 3 such processes running
[2025-10-13 10:49:14] 2025-10-13 14:49:14,082 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:49:14] 2025-10-13 14:49:14,083 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:49:14] 2025-10-13 14:49:14,083 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:49:14] 2025-10-13 14:49:14,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:49:14] 2025-10-13 14:49:14,083 | INFO     | [monitor] control thread has ended
[2025-10-13 10:49:14] 2025-10-13 14:49:14,168 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:49:14] 2025-10-13 14:49:14,170 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:49:14] 2025-10-13 14:49:14,171 [wrapper] pilotpid: 3794754
[2025-10-13 10:49:14] 2025-10-13 14:49:14,173 [wrapper] Pilot exit status: 0
[2025-10-13 10:49:14] 2025-10-13 14:49:14,179 [wrapper] pandaids: 6840850862
[2025-10-13 10:49:14] 2025-10-13 14:49:14,202 [wrapper] cleanup supervisor_pilot 3866549 3794755
[2025-10-13 10:49:14] 2025-10-13 14:49:14,204 [wrapper] Test setup, not cleaning
[2025-10-13 10:49:14] 2025-10-13 14:49:14,206 [wrapper] apfmon messages muted
[2025-10-13 10:49:14] 2025-10-13 14:49:14,207 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:49:14] 2025-10-13 14:49:14,209 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:49:14]  *** Error codes and diagnostics ***
[2025-10-13 10:49:14]     "exeErrorCode": 0,
[2025-10-13 10:49:14]     "exeErrorDiag": "",
[2025-10-13 10:49:14]     "pilotErrorCode": 0,
[2025-10-13 10:49:14]     "pilotErrorDiag": "",
[2025-10-13 10:49:14]  *** Listing of results directory ***
[2025-10-13 10:49:14] total 413296
[2025-10-13 10:49:14] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 10:49:14] -rwx------. 1 boincer umatlas     36292 Oct 12 18:13 runpilot2-wrapper.sh
[2025-10-13 10:49:14] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:13 queuedata.json
[2025-10-13 10:49:14] -rw-r--r--. 1 boincer umatlas       100 Oct 13 09:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:49:14] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 09:47 run_atlas
[2025-10-13 10:49:14] -rw-r--r--. 1 boincer umatlas       105 Oct 13 09:47 job.xml
[2025-10-13 10:49:14] -rw-r--r--. 2 boincer umatlas 222491257 Oct 13 09:47 EVNT.46676267._004335.pool.root.1
[2025-10-13 10:49:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 09:47 start_atlas.sh
[2025-10-13 10:49:14] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 09:47 shared
[2025-10-13 10:49:14] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 09:47 input.tar.gz
[2025-10-13 10:49:14] -rw-r--r--. 1 boincer umatlas         0 Oct 13 09:47 boinc_lockfile
[2025-10-13 10:49:14] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 09:47 pandaJob.out
[2025-10-13 10:49:14] -rw-------. 1 boincer umatlas    972489 Oct 13 09:47 agis_schedconf.cvmfs.json
[2025-10-13 10:49:14] -rw-------. 1 boincer umatlas   1560580 Oct 13 09:47 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:49:14] drwx------. 5 boincer umatlas      4096 Oct 13 09:47 pilot3
[2025-10-13 10:49:14] -rw-r--r--. 1 boincer umatlas      6659 Oct 13 10:38 init_data.xml
[2025-10-13 10:49:14] -rw-------. 1 boincer umatlas 195083978 Oct 13 10:48 HITS.46676269._090810.pool.root.1
[2025-10-13 10:49:14] -rw-r--r--. 1 boincer umatlas       529 Oct 13 10:48 boinc_task_state.xml
[2025-10-13 10:49:14] -rw-------. 1 boincer umatlas        95 Oct 13 10:48 pilot_heartbeat.json
[2025-10-13 10:49:14] -rw-------. 1 boincer umatlas      1031 Oct 13 10:48 memory_monitor_summary.json
[2025-10-13 10:49:14] -rw-------. 1 boincer umatlas    307949 Oct 13 10:48 log.46676269._090810.job.log.tgz.1
[2025-10-13 10:49:14] -rw-------. 1 boincer umatlas      7818 Oct 13 10:48 heartbeat.json
[2025-10-13 10:49:14] -rw-r--r--. 1 boincer umatlas        27 Oct 13 10:49 wrapper_checkpoint.txt
[2025-10-13 10:49:14] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 10:49 boinc_mmap_file
[2025-10-13 10:49:14] -rw-------. 1 boincer umatlas       822 Oct 13 10:49 pilotlog.txt
[2025-10-13 10:49:14] -rw-------. 1 boincer umatlas    559078 Oct 13 10:49 log.46676269._090810.job.log.1
[2025-10-13 10:49:14] -rw-------. 1 boincer umatlas       357 Oct 13 10:49 output.list
[2025-10-13 10:49:14] -rw-r--r--. 1 boincer umatlas       620 Oct 13 10:49 runtime_log
[2025-10-13 10:49:14] -rw-------. 1 boincer umatlas    890880 Oct 13 10:49 result.tar.gz
[2025-10-13 10:49:14] -rw-r--r--. 1 boincer umatlas      8703 Oct 13 10:49 runtime_log.err
[2025-10-13 10:49:14] -rw-------. 1 boincer umatlas       649 Oct 13 10:49 gjYNDmWUJS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9olNDmTutwTm.diag
[2025-10-13 10:49:14] -rw-r--r--. 1 boincer umatlas     21651 Oct 13 10:49 stderr.txt
[2025-10-13 10:49:14] HITS file was successfully produced:
[2025-10-13 10:49:14] -rw-------. 1 boincer umatlas 195083978 Oct 13 10:48 shared/HITS.pool.root.1
[2025-10-13 10:49:14]  *** Contents of shared directory: ***
[2025-10-13 10:49:14] total 409248
[2025-10-13 10:49:14] -rw-r--r--. 2 boincer umatlas 222491257 Oct 13 09:47 ATLAS.root_0
[2025-10-13 10:49:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 09:47 start_atlas.sh
[2025-10-13 10:49:14] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 09:47 input.tar.gz
[2025-10-13 10:49:14] -rw-------. 1 boincer umatlas 195083978 Oct 13 10:48 HITS.pool.root.1
[2025-10-13 10:49:14] -rw-------. 1 boincer umatlas    890880 Oct 13 10:49 result.tar.gz
10:49:15 (3791060): run_atlas exited; CPU time 26832.472076
10:49:15 (3791060): called boinc_finish(0)

</stderr_txt>
]]>

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