Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:44:06 (22704): wrapper (7.7.26015): starting
09:44:06 (22704): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 09:44:06] Arguments: --nthreads 12
[2025-10-13 09:44:06] Threads: 12
[2025-10-13 09:44:06] Checking for CVMFS
[2025-10-13 09:44:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:44:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:44:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:44:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:44:06] 2.11.2.0 3009 9664 91628 151662 2 1 19791716 20275200 1 130560 0 9251135 99.993 323721 43852 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 09:44:06] CVMFS is ok
[2025-10-13 09:44:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:44:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:44:06] Further information can be found at the LHC@home message board.
[2025-10-13 09:44:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:44:06] Checking for apptainer binary...
[2025-10-13 09:44:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:44:06] Running /usr/bin/apptainer --version
[2025-10-13 09:44:06] apptainer version 1.3.2-1.el7
[2025-10-13 09:44:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:44:08] c-115-42.aglt2.org
[2025-10-13 09:44:08] apptainer works
[2025-10-13 09:44:08] Set ATHENA_PROC_NUMBER=12
[2025-10-13 09:44:08] Set ATHENA_CORE_NUMBER=12
[2025-10-13 09:44:08] Starting ATLAS job with PandaID=6843000937
[2025-10-13 09:44:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:51:35]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:51:35]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6843000937/log.46676269._096827.job.log.tgz.1
[2025-10-13 10:51:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/96/log.46676269._096827.job.log.tgz.1
[2025-10-13 10:51:35]  workdir=None
[2025-10-13 10:51:35] ]
[2025-10-13 10:51:35] 2025-10-13 14:50:36,289 | INFO     | transferring file log.46676269._096827.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6843000937/log.46676269._096827.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 10:51:35] 2025-10-13 14:50:36,289 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6843000937/log.46676269._096827.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._096827.job
[2025-10-13 10:51:35] 2025-10-13 14:50:36,311 | INFO     | adding to output.list: log.46676269._096827.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/96/log.46676269._096827.job.log.tg
[2025-10-13 10:51:35] 2025-10-13 14:50:36,313 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 10:51:35] 2025-10-13 14:50:36,313 | INFO     | summary of transferred files:
[2025-10-13 10:51:35] 2025-10-13 14:50:36,313 | INFO     |  -- lfn=log.46676269._096827.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 10:51:35] 2025-10-13 14:50:36,314 | INFO     | stage-out finished correctly
[2025-10-13 10:51:35] 2025-10-13 14:50:36,427 | WARNING  | process 732 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 10:51:35] 2025-10-13 14:50:36,427 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6843000937/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 10:51:35] 2025-10-13 14:50:36,511 | INFO     | number of running child processes to parent process 732: 1
[2025-10-13 10:51:35] 2025-10-13 14:50:36,511 | INFO     | maximum number of monitored processes: 6
[2025-10-13 10:51:35] 2025-10-13 14:50:36,943 | INFO     | time since job start (3972s) is within the limit (172800.0s)
[2025-10-13 10:51:35] 2025-10-13 14:50:38,948 | INFO     | time since job start (3974s) is within the limit (172800.0s)
[2025-10-13 10:51:35] 2025-10-13 14:50:39,014 | INFO     | monitor loop #296: job 0:6843000937 is in state 'finished'
[2025-10-13 10:51:35] 2025-10-13 14:50:39,014 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:51:35] 2025-10-13 14:50:39,180 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 10:51:35] 2025-10-13 14:50:40,954 | INFO     | time since job start (3976s) is within the limit (172800.0s)
[2025-10-13 10:51:35] 2025-10-13 14:50:41,126 | INFO     | job 6843000937 has state=finished
[2025-10-13 10:51:35] 2025-10-13 14:50:41,127 | INFO     | preparing for final server update for job 6843000937 in state='finished'
[2025-10-13 10:51:35] 2025-10-13 14:50:41,127 | INFO     | this job has now completed (state=finished)
[2025-10-13 10:51:35] 2025-10-13 14:50:41,127 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 10:51:35] 2025-10-13 14:50:41,128 | INFO     | log transfer has been attempted: DONE
[2025-10-13 10:51:35] 2025-10-13 14:50:41,128 | INFO     | job 6843000937 has finished - writing final server update
[2025-10-13 10:51:35] 2025-10-13 14:50:41,128 | INFO     | total number of processed events: 400 (read)
[2025-10-13 10:51:35] 2025-10-13 14:50:41,129 | INFO     | executing command: lscpu
[2025-10-13 10:51:35] 2025-10-13 14:50:41,152 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 10:51:35] 2025-10-13 14:50:41,517 | INFO     | monitor loop #297: job 0:6843000937 is in state 'finished'
[2025-10-13 10:51:35] 2025-10-13 14:50:41,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:51:35] 2025-10-13 14:50:42,959 | INFO     | time since job start (3978s) is within the limit (172800.0s)
[2025-10-13 10:51:35] 2025-10-13 14:50:44,020 | INFO     | monitor loop #298: job 0:6843000937 is in state 'finished'
[2025-10-13 10:51:35] 2025-10-13 14:50:44,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:51:35] 2025-10-13 14:50:44,965 | INFO     | time since job start (3980s) is within the limit (172800.0s)
[2025-10-13 10:51:35] 2025-10-13 14:50:45,599 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 10:51:35] 2025-10-13 14:50:45,603 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-10-13 10:51:35] 2025-10-13 14:50:45,605 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6843000937/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 10:51:35] 2025-10-13 14:50:45,606 | INFO     | extracted standard info from prmon json
[2025-10-13 10:51:35] 2025-10-13 14:50:45,606 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 10:51:35] 2025-10-13 14:50:45,606 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 10:51:35] 2025-10-13 14:50:45,606 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 10:51:35] 2025-10-13 14:50:45,607 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:51:35] 2025-10-13 14:50:45,608 | INFO     | fitting pss+swap vs Time
[2025-10-13 10:51:35] 2025-10-13 14:50:45,608 | INFO     | sum of square deviations: 60482994.5
[2025-10-13 10:51:35] 2025-10-13 14:50:45,608 | INFO     | sum of deviations: -5033874238.500001
[2025-10-13 10:51:35] 2025-10-13 14:50:45,608 | INFO     | mean x: 1760365135.5
[2025-10-13 10:51:35] 2025-10-13 14:50:45,609 | INFO     | mean y: 2780983.224137931
[2025-10-13 10:51:35] 2025-10-13 14:50:45,609 | INFO     | -- intersect: 146514321610.5159
[2025-10-13 10:51:35] 2025-10-13 14:50:45,609 | INFO     | intersect: 146514321610.5159
[2025-10-13 10:51:35] 2025-10-13 14:50:45,609 | INFO     | chi2: 0.04846287131110974
[2025-10-13 10:51:35] 2025-10-13 14:50:45,609 | INFO     | -- intersect: 146514321610.5159
[2025-10-13 10:51:35] 2025-10-13 14:50:45,609 | INFO     | current memory leak: -83.23 B/s (using 58 data points, chi2=0.05)
[2025-10-13 10:51:35] 2025-10-13 14:50:45,609 | INFO     | could have reported an average CPU frequency of 2130 MHz (6 samples)
[2025-10-13 10:51:35] 2025-10-13 14:50:45,610 | INFO     | ..............................
[2025-10-13 10:51:35] 2025-10-13 14:50:45,610 | INFO     | . Timing measurements:
[2025-10-13 10:51:35] 2025-10-13 14:50:45,610 | INFO     | . get job = 0 s
[2025-10-13 10:51:35] 2025-10-13 14:50:45,610 | INFO     | . initial setup = 2 s
[2025-10-13 10:51:35] 2025-10-13 14:50:45,610 | INFO     | . payload setup = 6 s
[2025-10-13 10:51:35] 2025-10-13 14:50:45,610 | INFO     | . stage-in = 0 s
[2025-10-13 10:51:35] 2025-10-13 14:50:45,610 | INFO     | . payload execution = 3945 s
[2025-10-13 10:51:35] 2025-10-13 14:50:45,610 | INFO     | . stage-out = 0 s
[2025-10-13 10:51:35] 2025-10-13 14:50:45,610 | INFO     | . log creation = 0 s
[2025-10-13 10:51:35] 2025-10-13 14:50:45,611 | INFO     | ..............................
[2025-10-13 10:51:35] 2025-10-13 14:50:45,684 | INFO     | 
[2025-10-13 10:51:35] 2025-10-13 14:50:45,685 | INFO     | job summary report
[2025-10-13 10:51:35] 2025-10-13 14:50:45,685 | INFO     | --------------------------------------------------
[2025-10-13 10:51:35] 2025-10-13 14:50:45,685 | INFO     | PanDA job id: 6843000937
[2025-10-13 10:51:35] 2025-10-13 14:50:45,685 | INFO     | task id: 46676269
[2025-10-13 10:51:35] 2025-10-13 14:50:45,685 | INFO     | errors: (none)
[2025-10-13 10:51:35] 2025-10-13 14:50:45,685 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:51:35] 2025-10-13 14:50:45,686 | INFO     | pilot state: finished 
[2025-10-13 10:51:35] 2025-10-13 14:50:45,686 | INFO     | transexitcode: 0
[2025-10-13 10:51:35] 2025-10-13 14:50:45,686 | INFO     | exeerrorcode: 0
[2025-10-13 10:51:35] 2025-10-13 14:50:45,686 | INFO     | exeerrordiag: 
[2025-10-13 10:51:35] 2025-10-13 14:50:45,686 | INFO     | exitcode: 0
[2025-10-13 10:51:35] 2025-10-13 14:50:45,686 | INFO     | exitmsg: OK
[2025-10-13 10:51:35] 2025-10-13 14:50:45,687 | INFO     | cpuconsumptiontime: 42630 s
[2025-10-13 10:51:35] 2025-10-13 14:50:45,687 | INFO     | nevents: 400
[2025-10-13 10:51:35] 2025-10-13 14:50:45,687 | INFO     | neventsw: 0
[2025-10-13 10:51:35] 2025-10-13 14:50:45,687 | INFO     | pid: 732
[2025-10-13 10:51:35] 2025-10-13 14:50:45,687 | INFO     | pgrp: 732
[2025-10-13 10:51:35] 2025-10-13 14:50:45,687 | INFO     | corecount: 12
[2025-10-13 10:51:35] 2025-10-13 14:50:45,688 | INFO     | event service: False
[2025-10-13 10:51:35] 2025-10-13 14:50:45,688 | INFO     | sizes: {0: 2348806, 5: 2349068, 11: 2349124, 3955: 2374936, 3956: 2374935, 3957: 2383989, 3960: 2384173, 3966: 2384367}
[2025-10-13 10:51:35] 2025-10-13 14:50:45,688 | INFO     | --------------------------------------------------
[2025-10-13 10:51:35] 2025-10-13 14:50:45,688 | INFO     | 
[2025-10-13 10:51:35] 2025-10-13 14:50:45,688 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 10:51:35] 2025-10-13 14:50:45,715 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:51:35] 2025-10-13 14:50:45,715 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:51:35] 2025-10-13 14:50:45,715 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:51:35] 2025-10-13 14:50:45,715 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:51:35] 2025-10-13 14:50:45,716 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:51:35] 2025-10-13 14:50:45,716 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:51:35] 2025-10-13 14:50:45,716 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:51:35] 2025-10-13 14:50:45,716 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:51:35] 2025-10-13 14:50:45,716 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:51:35] 2025-10-13 14:50:45,716 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:51:35] 2025-10-13 14:50:45,717 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:51:35] 2025-10-13 14:50:45,717 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:51:35] 2025-10-13 14:50:45,717 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:51:35] 2025-10-13 14:50:45,717 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:51:35] 2025-10-13 14:50:45,717 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:51:35] 2025-10-13 14:50:45,717 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:51:35] 2025-10-13 14:50:45,718 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:51:35] 2025-10-13 14:50:45,718 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:51:35] 2025-10-13 14:50:45,718 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:51:35] 2025-10-13 14:50:45,718 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:51:35] 2025-10-13 14:50:45,718 | INFO     | job 6843000937 has completed (purged errors)
[2025-10-13 10:51:35] 2025-10-13 14:50:45,718 | INFO     | overall cleanup function is called
[2025-10-13 10:51:35] 2025-10-13 14:50:46,726 | INFO     | --- collectZombieJob: --- 10, [732]
[2025-10-13 10:51:35] 2025-10-13 14:50:46,727 | INFO     | zombie collector waiting for pid 732
[2025-10-13 10:51:35] 2025-10-13 14:50:46,727 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:51:35] 2025-10-13 14:50:46,727 | INFO     | collected zombie processes
[2025-10-13 10:51:35] 2025-10-13 14:50:46,727 | INFO     | will attempt to kill all subprocesses of pid=732
[2025-10-13 10:51:35] 2025-10-13 14:50:46,817 | INFO     | process IDs to be killed: [732] (in reverse order)
[2025-10-13 10:51:35] 2025-10-13 14:50:46,867 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:51:35] 2025-10-13 14:50:46,868 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:51:35] 2025-10-13 14:50:46,871 | INFO     | did not find any defunct processes belonging to 732
[2025-10-13 10:51:35] 2025-10-13 14:50:46,875 | INFO     | did not find any defunct processes belonging to 732
[2025-10-13 10:51:35] 2025-10-13 14:50:46,875 | INFO     | ready for new job
[2025-10-13 10:51:35] 2025-10-13 14:50:46,876 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:51:35] 2025-10-13 14:50:46,877 | INFO     | ***************************************
[2025-10-13 10:51:35] 2025-10-13 14:50:46,877 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 10:51:35] 2025-10-13 14:50:46,877 | INFO     | ***************************************
[2025-10-13 10:51:35] 2025-10-13 14:50:46,877 | INFO     | 
[2025-10-13 10:51:35] 2025-10-13 14:50:46,877 | INFO     | architecture information:
[2025-10-13 10:51:35] 2025-10-13 14:50:46,878 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:51:35] 2025-10-13 14:50:46,893 | INFO     | cat /etc/os-release:
[2025-10-13 10:51:35] NAME="CentOS Linux"
[2025-10-13 10:51:35] VERSION="7 (Core)"
[2025-10-13 10:51:35] ID="centos"
[2025-10-13 10:51:35] ID_LIKE="rhel fedora"
[2025-10-13 10:51:35] VERSION_ID="7"
[2025-10-13 10:51:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:51:35] ANSI_COLOR="0;31"
[2025-10-13 10:51:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:51:35] HOME_URL="https://www.centos.org/"
[2025-10-13 10:51:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:51:35] 
[2025-10-13 10:51:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:51:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:51:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:51:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:51:35] 
[2025-10-13 10:51:35] 2025-10-13 14:50:46,894 | INFO     | ***************************************
[2025-10-13 10:51:35] 2025-10-13 14:50:47,397 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 10:51:35] 2025-10-13 14:50:47,413 | INFO     | sufficient remaining disk space (18581815296 B)
[2025-10-13 10:51:35] 2025-10-13 14:50:47,414 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:51:35] 2025-10-13 14:50:47,414 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:51:35] 2025-10-13 14:50:47,414 | INFO     | update_server=False
[2025-10-13 10:51:35] 2025-10-13 14:50:47,414 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:51:35] 2025-10-13 14:50:47,414 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:51:35] 2025-10-13 14:50:47,415 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:51:35] 2025-10-13 14:50:47,528 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:51:35] 2025-10-13 14:50:47,528 | INFO     | aborting loop
[2025-10-13 10:51:35] 2025-10-13 14:50:47,799 | INFO     | all job control threads have been joined
[2025-10-13 10:51:35] 2025-10-13 14:50:48,420 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:51:35] 2025-10-13 14:50:48,420 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:51:35] 2025-10-13 14:50:48,430 | INFO     | all data control threads have been joined
[2025-10-13 10:51:35] 2025-10-13 14:50:48,534 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:51:35] 2025-10-13 14:50:48,792 | INFO     | all payload control threads have been joined
[2025-10-13 10:51:35] 2025-10-13 14:50:48,804 | INFO     | [job] control thread has finished
[2025-10-13 10:51:35] 2025-10-13 14:50:48,874 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:51:35] 2025-10-13 14:50:49,233 | INFO     | [job] validate thread has finished
[2025-10-13 10:51:35] 2025-10-13 14:50:49,240 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:51:35] 2025-10-13 14:50:49,405 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:51:35] 2025-10-13 14:50:49,420 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:51:35] 2025-10-13 14:50:49,432 | INFO     | [data] control thread has finished
[2025-10-13 10:51:35] 2025-10-13 14:50:49,481 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:51:35] 2025-10-13 14:50:49,502 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:51:35] 2025-10-13 14:50:49,667 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:51:35] 2025-10-13 14:50:49,763 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:51:35] 2025-10-13 14:50:49,794 | INFO     | [payload] control thread has finished
[2025-10-13 10:51:35] 2025-10-13 14:50:53,769 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:51:35] 2025-10-13 14:50:57,640 | INFO     | job.realtimelogging is not enabled
[2025-10-13 10:51:35] 2025-10-13 14:50:58,646 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:51:35] 2025-10-13 14:51:18,155 | INFO     | PID=26756 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 10:51:35] 2025-10-13 14:51:18,155 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:51:35] 2025-10-13 14:51:18,156 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:51:35] 2025-10-13 14:51:18,156 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:51:35] 2025-10-13 14:51:29,936 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:51:35] 2025-10-13 14:51:30,616 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139895971063616)>', '<ExcThread(monitor, started 139895372756736)>']
[2025-10-13 10:51:35] 2025-10-13 14:51:31,215 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:51:35] 2025-10-13 14:51:31,216 | INFO     | [monitor] control thread has ended
[2025-10-13 10:51:35] 2025-10-13 14:51:35,630 | INFO     | all workflow threads have been joined
[2025-10-13 10:51:35] 2025-10-13 14:51:35,630 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:51:35] 2025-10-13 14:51:35,630 | INFO     | traces error code: 0
[2025-10-13 10:51:35] 2025-10-13 14:51:35,631 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:51:35] 2025-10-13 14:51:35,717 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:51:35] 2025-10-13 14:51:35,721 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:51:35] 2025-10-13 14:51:35,725 [wrapper] pilotpid: 26756
[2025-10-13 10:51:35] 2025-10-13 14:51:35,729 [wrapper] Pilot exit status: 0
[2025-10-13 10:51:35] 2025-10-13 14:51:35,744 [wrapper] pandaids: 6843000937
[2025-10-13 10:51:35] 2025-10-13 14:51:35,787 [wrapper] cleanup supervisor_pilot 29333 26757
[2025-10-13 10:51:35] 2025-10-13 14:51:35,792 [wrapper] Test setup, not cleaning
[2025-10-13 10:51:35] 2025-10-13 14:51:35,795 [wrapper] apfmon messages muted
[2025-10-13 10:51:35] 2025-10-13 14:51:35,799 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:51:35] 2025-10-13 14:51:35,803 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:51:35]  *** Error codes and diagnostics ***
[2025-10-13 10:51:35]     "exeErrorCode": 0,
[2025-10-13 10:51:35]     "exeErrorDiag": "",
[2025-10-13 10:51:35]     "pilotErrorCode": 0,
[2025-10-13 10:51:35]     "pilotErrorDiag": "",
[2025-10-13 10:51:35]  *** Listing of results directory ***
[2025-10-13 10:51:35] total 416020
[2025-10-13 10:51:35] -rw-r--r-- 1 boincer umatlas    557409 Oct 13 09:04 pilot3.tar.gz
[2025-10-13 10:51:35] -rw-r--r-- 1 boincer umatlas      5112 Oct 13 09:41 queuedata.json
[2025-10-13 10:51:35] -rwx------ 1 boincer umatlas     36292 Oct 13 09:43 runpilot2-wrapper.sh
[2025-10-13 10:51:35] -rw-r--r-- 1 boincer umatlas       100 Oct 13 09:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:51:35] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 09:44 run_atlas
[2025-10-13 10:51:35] -rw-r--r-- 1 boincer umatlas       105 Oct 13 09:44 job.xml
[2025-10-13 10:51:35] -rw-r--r-- 2 boincer umatlas 220395163 Oct 13 09:44 EVNT.46676267._002420.pool.root.1
[2025-10-13 10:51:35] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 09:44 start_atlas.sh
[2025-10-13 10:51:35] drwxrwx--x 2 boincer umatlas      4096 Oct 13 09:44 shared
[2025-10-13 10:51:35] -rw-r--r-- 2 boincer umatlas    569683 Oct 13 09:44 input.tar.gz
[2025-10-13 10:51:35] -rw-r--r-- 1 boincer umatlas         0 Oct 13 09:44 boinc_lockfile
[2025-10-13 10:51:35] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 09:44 pandaJob.out
[2025-10-13 10:51:35] -rw------- 1 boincer umatlas    972489 Oct 13 09:44 agis_schedconf.cvmfs.json
[2025-10-13 10:51:35] -rw------- 1 boincer umatlas   1560580 Oct 13 09:44 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:51:35] drwx------ 5 boincer umatlas      4096 Oct 13 09:44 pilot3
[2025-10-13 10:51:35] -rw-r--r-- 1 boincer umatlas      5954 Oct 13 10:49 init_data.xml
[2025-10-13 10:51:35] -rw------- 1 boincer umatlas 199775239 Oct 13 10:50 HITS.46676269._096827.pool.root.1
[2025-10-13 10:51:35] -rw-r--r-- 1 boincer umatlas       529 Oct 13 10:50 boinc_task_state.xml
[2025-10-13 10:51:35] -rw------- 1 boincer umatlas      1045 Oct 13 10:50 memory_monitor_summary.json
[2025-10-13 10:51:35] -rw------- 1 boincer umatlas    381246 Oct 13 10:50 log.46676269._096827.job.log.tgz.1
[2025-10-13 10:51:35] -rw------- 1 boincer umatlas      7850 Oct 13 10:50 heartbeat.json
[2025-10-13 10:51:35] -rw------- 1 boincer umatlas        95 Oct 13 10:51 pilot_heartbeat.json
[2025-10-13 10:51:35] -rw-r--r-- 1 boincer umatlas        27 Oct 13 10:51 wrapper_checkpoint.txt
[2025-10-13 10:51:35] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 10:51 boinc_mmap_file
[2025-10-13 10:51:35] -rw------- 1 boincer umatlas      4818 Oct 13 10:51 pilotlog.txt
[2025-10-13 10:51:35] -rw------- 1 boincer umatlas    583088 Oct 13 10:51 log.46676269._096827.job.log.1
[2025-10-13 10:51:35] -rw------- 1 boincer umatlas       357 Oct 13 10:51 output.list
[2025-10-13 10:51:35] -rw-r--r-- 1 boincer umatlas       620 Oct 13 10:51 runtime_log
[2025-10-13 10:51:35] -rw------- 1 boincer umatlas    983040 Oct 13 10:51 result.tar.gz
[2025-10-13 10:51:35] -rw-r--r-- 1 boincer umatlas      8705 Oct 13 10:51 runtime_log.err
[2025-10-13 10:51:35] -rw------- 1 boincer umatlas       659 Oct 13 10:51 KEQODm10XS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3mmNDmmsifvn.diag
[2025-10-13 10:51:35] -rw-r--r-- 1 boincer umatlas     22241 Oct 13 10:51 stderr.txt
[2025-10-13 10:51:35] HITS file was successfully produced:
[2025-10-13 10:51:35] -rw------- 1 boincer umatlas 199775239 Oct 13 10:50 shared/HITS.pool.root.1
[2025-10-13 10:51:35]  *** Contents of shared directory: ***
[2025-10-13 10:51:35] total 411872
[2025-10-13 10:51:35] -rw-r--r-- 2 boincer umatlas 220395163 Oct 13 09:44 ATLAS.root_0
[2025-10-13 10:51:35] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 09:44 start_atlas.sh
[2025-10-13 10:51:35] -rw-r--r-- 2 boincer umatlas    569683 Oct 13 09:44 input.tar.gz
[2025-10-13 10:51:35] -rw------- 1 boincer umatlas 199775239 Oct 13 10:50 HITS.pool.root.1
[2025-10-13 10:51:35] -rw------- 1 boincer umatlas    983040 Oct 13 10:51 result.tar.gz
10:51:37 (22704): run_atlas exited; CPU time 42623.352190
10:51:37 (22704): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN