Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:37:50 (15459): wrapper (7.7.26015): starting
09:37:50 (15459): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 09:37:50] Arguments: --nthreads 8
[2025-10-13 09:37:50] Threads: 8
[2025-10-13 09:37:50] Checking for CVMFS
[2025-10-13 09:37:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:37:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:37:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:37:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:37:50] 2.11.2.0 26356 44291 121156 151662 2 18 12131071 18432000 917 130560 0 45420452 99.974 2192312 18449 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 09:37:50] CVMFS is ok
[2025-10-13 09:37:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:37:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:37:50] Further information can be found at the LHC@home message board.
[2025-10-13 09:37:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:37:50] Checking for apptainer binary...
[2025-10-13 09:37:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:37:50] Running /usr/bin/apptainer --version
[2025-10-13 09:37:50] apptainer version 1.3.2-1.el7
[2025-10-13 09:37:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:37:51] c-206-6.aglt2.org
[2025-10-13 09:37:51] apptainer works
[2025-10-13 09:37:51] Set ATHENA_PROC_NUMBER=8
[2025-10-13 09:37:51] Set ATHENA_CORE_NUMBER=8
[2025-10-13 09:37:51] Starting ATLAS job with PandaID=6840850069
[2025-10-13 09:37:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:24:39]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:24:39] 2025-10-13 15:24:04,273 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:24:39] 2025-10-13 15:24:05,398 | INFO     | time since job start (6364s) is within the limit (172800.0s)
[2025-10-13 11:24:39] 2025-10-13 15:24:05,795 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 11:24:39] 2025-10-13 15:24:05,801 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1779.0
[2025-10-13 11:24:39] 2025-10-13 15:24:05,806 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840850069/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 11:24:39] 2025-10-13 15:24:05,806 | INFO     | extracted standard info from prmon json
[2025-10-13 11:24:39] 2025-10-13 15:24:05,806 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 11:24:39] 2025-10-13 15:24:05,806 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 11:24:39] 2025-10-13 15:24:05,807 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:24:39] 2025-10-13 15:24:05,807 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:24:39] 2025-10-13 15:24:05,809 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:24:39] 2025-10-13 15:24:05,809 | INFO     | sum of square deviations: 348769330.0
[2025-10-13 11:24:39] 2025-10-13 15:24:05,809 | INFO     | sum of deviations: -891843362.9999974
[2025-10-13 11:24:39] 2025-10-13 15:24:05,809 | INFO     | mean x: 1760365845.5
[2025-10-13 11:24:39] 2025-10-13 15:24:05,810 | INFO     | mean y: 2533581.6346153845
[2025-10-13 11:24:39] 2025-10-13 15:24:05,810 | INFO     | -- intersect: 4503991882.916594
[2025-10-13 11:24:39] 2025-10-13 15:24:05,810 | INFO     | intersect: 4503991882.916594
[2025-10-13 11:24:39] 2025-10-13 15:24:05,810 | INFO     | chi2: 1.3534378387993002
[2025-10-13 11:24:39] 2025-10-13 15:24:05,810 | INFO     | sum of square deviations: 300842850.0
[2025-10-13 11:24:39] 2025-10-13 15:24:05,811 | INFO     | sum of deviations: -521078469.99999845
[2025-10-13 11:24:39] 2025-10-13 15:24:05,811 | INFO     | mean x: 1760365693.0
[2025-10-13 11:24:39] 2025-10-13 15:24:05,811 | INFO     | mean y: 2534762.3131313133
[2025-10-13 11:24:39] 2025-10-13 15:24:05,811 | INFO     | -- intersect: 3051597294.292625
[2025-10-13 11:24:39] 2025-10-13 15:24:05,811 | INFO     | intersect: 3051597294.292625
[2025-10-13 11:24:39] 2025-10-13 15:24:05,811 | INFO     | chi2: 1.3548269520256722
[2025-10-13 11:24:39] 2025-10-13 15:24:05,812 | INFO     | current chi2=1.3548269520256722 (change=-0.10263590883525671 %)
[2025-10-13 11:24:39] 2025-10-13 15:24:05,812 | INFO     | right removable region: 98
[2025-10-13 11:24:39] 2025-10-13 15:24:05,812 | INFO     | sum of square deviations: 300842850.0
[2025-10-13 11:24:39] 2025-10-13 15:24:05,812 | INFO     | sum of deviations: -14040967921.999996
[2025-10-13 11:24:39] 2025-10-13 15:24:05,812 | INFO     | mean x: 1760365998.0
[2025-10-13 11:24:39] 2025-10-13 15:24:05,813 | INFO     | mean y: 2574386.3535353537
[2025-10-13 11:24:39] 2025-10-13 15:24:05,813 | INFO     | -- intersect: 82162554285.81769
[2025-10-13 11:24:39] 2025-10-13 15:24:05,813 | INFO     | intersect: 82162554285.81769
[2025-10-13 11:24:39] 2025-10-13 15:24:05,813 | INFO     | chi2: 0.09023878537125024
[2025-10-13 11:24:39] 2025-10-13 15:24:05,813 | INFO     | current chi2=0.09023878537125024 (change=93.33262431532833 %)
[2025-10-13 11:24:39] 2025-10-13 15:24:05,813 | INFO     | sum of square deviations: 257521107.5
[2025-10-13 11:24:39] 2025-10-13 15:24:05,814 | INFO     | sum of deviations: -11655635634.0
[2025-10-13 11:24:39] 2025-10-13 15:24:05,814 | INFO     | mean x: 1760366150.5
[2025-10-13 11:24:39] 2025-10-13 15:24:05,814 | INFO     | mean y: 2565952.5319148935
[2025-10-13 11:24:39] 2025-10-13 15:24:05,814 | INFO     | -- intersect: 79678312270.3564
[2025-10-13 11:24:39] 2025-10-13 15:24:05,814 | INFO     | intersect: 79678312270.3564
[2025-10-13 11:24:39] 2025-10-13 15:24:05,814 | INFO     | chi2: 0.0893070091182972
[2025-10-13 11:24:39] 2025-10-13 15:24:05,814 | INFO     | current chi2=0.0893070091182972 (change=1.0325673701387201 %)
[2025-10-13 11:24:39] 2025-10-13 15:24:05,815 | INFO     | left removable region: 20
[2025-10-13 11:24:39] 2025-10-13 15:24:05,815 | INFO     | sum of square deviations: 147126479.5
[2025-10-13 11:24:39] 2025-10-13 15:24:05,815 | INFO     | sum of deviations: -5330893821.999999
[2025-10-13 11:24:39] 2025-10-13 15:24:05,815 | INFO     | mean x: 1760366272.5
[2025-10-13 11:24:39] 2025-10-13 15:24:05,815 | INFO     | mean y: 2544080.7435897435
[2025-10-13 11:24:39] 2025-10-13 15:24:05,815 | INFO     | -- intersect: 63786614211.5552
[2025-10-13 11:24:39] 2025-10-13 15:24:05,816 | INFO     | intersect: 63786614211.5552
[2025-10-13 11:24:39] 2025-10-13 15:24:05,816 | INFO     | chi2: 0.0700569477581746
[2025-10-13 11:24:39] 2025-10-13 15:24:05,816 | INFO     | -- intersect: 63786614211.5552
[2025-10-13 11:24:39] 2025-10-13 15:24:05,816 | INFO     | current memory leak: -36.23 B/s (using 78 data points, chi2=0.07)
[2025-10-13 11:24:39] 2025-10-13 15:24:05,816 | INFO     | could have reported an average CPU frequency of 2007 MHz (7 samples)
[2025-10-13 11:24:39] 2025-10-13 15:24:05,816 | INFO     | ..............................
[2025-10-13 11:24:39] 2025-10-13 15:24:05,817 | INFO     | . Timing measurements:
[2025-10-13 11:24:39] 2025-10-13 15:24:05,817 | INFO     | . get job = 0 s
[2025-10-13 11:24:39] 2025-10-13 15:24:05,817 | INFO     | . initial setup = 2 s
[2025-10-13 11:24:39] 2025-10-13 15:24:05,817 | INFO     | . payload setup = 4 s
[2025-10-13 11:24:39] 2025-10-13 15:24:05,817 | INFO     | . stage-in = 0 s
[2025-10-13 11:24:39] 2025-10-13 15:24:05,817 | INFO     | . payload execution = 6330 s
[2025-10-13 11:24:39] 2025-10-13 15:24:05,817 | INFO     | . stage-out = 0 s
[2025-10-13 11:24:39] 2025-10-13 15:24:05,817 | INFO     | . log creation = 0 s
[2025-10-13 11:24:39] 2025-10-13 15:24:05,817 | INFO     | ..............................
[2025-10-13 11:24:39] 2025-10-13 15:24:06,300 | INFO     | 
[2025-10-13 11:24:39] 2025-10-13 15:24:06,301 | INFO     | job summary report
[2025-10-13 11:24:39] 2025-10-13 15:24:06,301 | INFO     | --------------------------------------------------
[2025-10-13 11:24:39] 2025-10-13 15:24:06,301 | INFO     | PanDA job id: 6840850069
[2025-10-13 11:24:39] 2025-10-13 15:24:06,301 | INFO     | task id: 46676269
[2025-10-13 11:24:39] 2025-10-13 15:24:06,301 | INFO     | errors: (none)
[2025-10-13 11:24:39] 2025-10-13 15:24:06,302 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:24:39] 2025-10-13 15:24:06,302 | INFO     | pilot state: finished 
[2025-10-13 11:24:39] 2025-10-13 15:24:06,302 | INFO     | transexitcode: 0
[2025-10-13 11:24:39] 2025-10-13 15:24:06,302 | INFO     | exeerrorcode: 0
[2025-10-13 11:24:39] 2025-10-13 15:24:06,302 | INFO     | exeerrordiag: 
[2025-10-13 11:24:39] 2025-10-13 15:24:06,302 | INFO     | exitcode: 0
[2025-10-13 11:24:39] 2025-10-13 15:24:06,303 | INFO     | exitmsg: OK
[2025-10-13 11:24:39] 2025-10-13 15:24:06,303 | INFO     | cpuconsumptiontime: 47877 s
[2025-10-13 11:24:39] 2025-10-13 15:24:06,303 | INFO     | nevents: 400
[2025-10-13 11:24:39] 2025-10-13 15:24:06,303 | INFO     | neventsw: 0
[2025-10-13 11:24:39] 2025-10-13 15:24:06,303 | INFO     | pid: 25590
[2025-10-13 11:24:39] 2025-10-13 15:24:06,303 | INFO     | pgrp: 25590
[2025-10-13 11:24:39] 2025-10-13 15:24:06,304 | INFO     | corecount: 8
[2025-10-13 11:24:39] 2025-10-13 15:24:06,304 | INFO     | event service: False
[2025-10-13 11:24:39] 2025-10-13 15:24:06,304 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 6338: 2376317, 6339: 2385370, 6341: 2385398, 6350: 2385720}
[2025-10-13 11:24:39] 2025-10-13 15:24:06,304 | INFO     | --------------------------------------------------
[2025-10-13 11:24:39] 2025-10-13 15:24:06,304 | INFO     | 
[2025-10-13 11:24:39] 2025-10-13 15:24:06,304 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 11:24:39] 2025-10-13 15:24:06,327 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:24:39] 2025-10-13 15:24:06,328 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:24:39] 2025-10-13 15:24:06,328 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:24:39] 2025-10-13 15:24:06,328 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:24:39] 2025-10-13 15:24:06,328 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:24:39] 2025-10-13 15:24:06,328 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:24:39] 2025-10-13 15:24:06,328 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:24:39] 2025-10-13 15:24:06,328 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:24:39] 2025-10-13 15:24:06,329 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:24:39] 2025-10-13 15:24:06,329 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:24:39] 2025-10-13 15:24:06,329 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:24:39] 2025-10-13 15:24:06,329 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:24:39] 2025-10-13 15:24:06,329 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:24:39] 2025-10-13 15:24:06,329 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:24:39] 2025-10-13 15:24:06,330 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:24:39] 2025-10-13 15:24:06,330 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:24:39] 2025-10-13 15:24:06,330 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:24:39] 2025-10-13 15:24:06,330 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:24:39] 2025-10-13 15:24:06,330 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:24:39] 2025-10-13 15:24:06,330 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:24:39] 2025-10-13 15:24:06,331 | INFO     | job 6840850069 has completed (purged errors)
[2025-10-13 11:24:39] 2025-10-13 15:24:06,331 | INFO     | overall cleanup function is called
[2025-10-13 11:24:39] 2025-10-13 15:24:06,523 | INFO     | PID=19137 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 11:24:39] 2025-10-13 15:24:07,339 | INFO     | --- collectZombieJob: --- 10, [25590]
[2025-10-13 11:24:39] 2025-10-13 15:24:07,339 | INFO     | zombie collector waiting for pid 25590
[2025-10-13 11:24:39] 2025-10-13 15:24:07,339 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:24:39] 2025-10-13 15:24:07,339 | INFO     | collected zombie processes
[2025-10-13 11:24:39] 2025-10-13 15:24:07,339 | INFO     | will attempt to kill all subprocesses of pid=25590
[2025-10-13 11:24:39] 2025-10-13 15:24:07,436 | INFO     | process IDs to be killed: [25590] (in reverse order)
[2025-10-13 11:24:39] 2025-10-13 15:24:07,489 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:24:39] 2025-10-13 15:24:07,490 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:24:39] 2025-10-13 15:24:07,494 | INFO     | did not find any defunct processes belonging to 25590
[2025-10-13 11:24:39] 2025-10-13 15:24:07,497 | INFO     | did not find any defunct processes belonging to 25590
[2025-10-13 11:24:39] 2025-10-13 15:24:07,497 | INFO     | ready for new job
[2025-10-13 11:24:39] 2025-10-13 15:24:07,497 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:24:39] 2025-10-13 15:24:07,498 | INFO     | ***************************************
[2025-10-13 11:24:39] 2025-10-13 15:24:07,499 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:24:39] 2025-10-13 15:24:07,499 | INFO     | ***************************************
[2025-10-13 11:24:39] 2025-10-13 15:24:07,499 | INFO     | 
[2025-10-13 11:24:39] 2025-10-13 15:24:07,500 | INFO     | architecture information:
[2025-10-13 11:24:39] 2025-10-13 15:24:07,500 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:24:39] 2025-10-13 15:24:07,515 | INFO     | cat /etc/os-release:
[2025-10-13 11:24:39] NAME="CentOS Linux"
[2025-10-13 11:24:39] VERSION="7 (Core)"
[2025-10-13 11:24:39] ID="centos"
[2025-10-13 11:24:39] ID_LIKE="rhel fedora"
[2025-10-13 11:24:39] VERSION_ID="7"
[2025-10-13 11:24:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:24:39] ANSI_COLOR="0;31"
[2025-10-13 11:24:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:24:39] HOME_URL="https://www.centos.org/"
[2025-10-13 11:24:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:24:39] 
[2025-10-13 11:24:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:24:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:24:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:24:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:24:39] 
[2025-10-13 11:24:39] 2025-10-13 15:24:07,515 | INFO     | ***************************************
[2025-10-13 11:24:39] 2025-10-13 15:24:08,018 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 11:24:39] 2025-10-13 15:24:08,034 | INFO     | sufficient remaining disk space (29205987328 B)
[2025-10-13 11:24:39] 2025-10-13 15:24:08,034 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:24:39] 2025-10-13 15:24:08,034 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:24:39] 2025-10-13 15:24:08,035 | INFO     | update_server=False
[2025-10-13 11:24:39] 2025-10-13 15:24:08,035 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:24:39] 2025-10-13 15:24:08,035 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:24:39] 2025-10-13 15:24:08,035 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:24:39] 2025-10-13 15:24:08,036 | INFO     | aborting loop
[2025-10-13 11:24:39] 2025-10-13 15:24:08,047 | INFO     | all job control threads have been joined
[2025-10-13 11:24:39] 2025-10-13 15:24:08,065 | INFO     | all data control threads have been joined
[2025-10-13 11:24:39] 2025-10-13 15:24:08,333 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:24:39] 2025-10-13 15:24:09,040 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:24:39] 2025-10-13 15:24:09,041 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:24:39] 2025-10-13 15:24:09,042 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:24:39] 2025-10-13 15:24:09,052 | INFO     | [job] control thread has finished
[2025-10-13 11:24:39] 2025-10-13 15:24:09,070 | INFO     | [data] control thread has finished
[2025-10-13 11:24:39] 2025-10-13 15:24:09,213 | INFO     | all payload control threads have been joined
[2025-10-13 11:24:39] 2025-10-13 15:24:09,285 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:24:39] 2025-10-13 15:24:09,299 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:24:39] 2025-10-13 15:24:09,307 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:24:39] 2025-10-13 15:24:09,397 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:24:39] 2025-10-13 15:24:09,888 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:24:39] 2025-10-13 15:24:10,219 | INFO     | [payload] control thread has finished
[2025-10-13 11:24:39] 2025-10-13 15:24:10,303 | INFO     | [job] validate thread has finished
[2025-10-13 11:24:39] 2025-10-13 15:24:10,307 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:24:39] 2025-10-13 15:24:10,338 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:24:39] 2025-10-13 15:24:10,911 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:24:39] 2025-10-13 15:24:11,917 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:24:39] 2025-10-13 15:24:12,041 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:24:39] 2025-10-13 15:24:18,448 | INFO     | job.realtimelogging is not enabled
[2025-10-13 11:24:39] 2025-10-13 15:24:19,453 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:24:39] 2025-10-13 15:24:20,557 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140589360019264)>', '<ExcThread(monitor, started 140588682823424)>']
[2025-10-13 11:24:39] 2025-10-13 15:24:25,582 | INFO     | all workflow threads have been joined
[2025-10-13 11:24:39] 2025-10-13 15:24:25,583 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:24:39] 2025-10-13 15:24:25,583 | INFO     | traces error code: 0
[2025-10-13 11:24:39] 2025-10-13 15:24:25,583 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:24:39] 2025-10-13 15:24:38,731 | INFO     | PID=19137 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 11:24:39] 2025-10-13 15:24:38,731 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:24:39] 2025-10-13 15:24:38,732 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:24:39] 2025-10-13 15:24:38,732 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:24:39] 2025-10-13 15:24:38,732 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:24:39] 2025-10-13 15:24:38,732 | INFO     | [monitor] control thread has ended
[2025-10-13 11:24:39] 2025-10-13 15:24:38,827 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:24:39] 2025-10-13 15:24:38,831 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:24:39] 2025-10-13 15:24:38,835 [wrapper] pilotpid: 19137
[2025-10-13 11:24:39] 2025-10-13 15:24:38,839 [wrapper] Pilot exit status: 0
[2025-10-13 11:24:39] 2025-10-13 15:24:38,855 [wrapper] pandaids: 6840850069
[2025-10-13 11:24:39] 2025-10-13 15:24:38,894 [wrapper] cleanup supervisor_pilot 19227 19138
[2025-10-13 11:24:39] 2025-10-13 15:24:38,898 [wrapper] Test setup, not cleaning
[2025-10-13 11:24:39] 2025-10-13 15:24:38,902 [wrapper] apfmon messages muted
[2025-10-13 11:24:39] 2025-10-13 15:24:38,906 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:24:39] 2025-10-13 15:24:38,910 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:24:39]  *** Error codes and diagnostics ***
[2025-10-13 11:24:39]     "exeErrorCode": 0,
[2025-10-13 11:24:39]     "exeErrorDiag": "",
[2025-10-13 11:24:39]     "pilotErrorCode": 0,
[2025-10-13 11:24:39]     "pilotErrorDiag": "",
[2025-10-13 11:24:39]  *** Listing of results directory ***
[2025-10-13 11:24:39] total 410112
[2025-10-13 11:24:39] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 11:24:39] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 18:06 queuedata.json
[2025-10-13 11:24:39] -rwx------ 1 boincer umatlas     36292 Oct 12 18:06 runpilot2-wrapper.sh
[2025-10-13 11:24:39] -rw-r--r-- 1 boincer umatlas       100 Oct 13 09:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:24:39] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 09:37 run_atlas
[2025-10-13 11:24:39] -rw-r--r-- 1 boincer umatlas       105 Oct 13 09:37 job.xml
[2025-10-13 11:24:39] -rw-r--r-- 2 boincer umatlas 217973139 Oct 13 09:37 EVNT.46676267._004059.pool.root.1
[2025-10-13 11:24:39] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 09:37 start_atlas.sh
[2025-10-13 11:24:39] drwxrwx--x 2 boincer umatlas      4096 Oct 13 09:37 shared
[2025-10-13 11:24:39] -rw-r--r-- 2 boincer umatlas    569683 Oct 13 09:37 input.tar.gz
[2025-10-13 11:24:39] -rw-r--r-- 1 boincer umatlas         0 Oct 13 09:37 boinc_lockfile
[2025-10-13 11:24:39] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 09:37 pandaJob.out
[2025-10-13 11:24:39] -rw------- 1 boincer umatlas    972489 Oct 13 09:37 agis_schedconf.cvmfs.json
[2025-10-13 11:24:39] -rw------- 1 boincer umatlas   1560580 Oct 13 09:38 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:24:39] drwx------ 5 boincer umatlas      4096 Oct 13 09:38 pilot3
[2025-10-13 11:24:39] -rw-r--r-- 1 boincer umatlas      5951 Oct 13 11:19 init_data.xml
[2025-10-13 11:24:39] -rw------- 1 boincer umatlas 195559246 Oct 13 11:23 HITS.46676269._090661.pool.root.1
[2025-10-13 11:24:39] -rw-r--r-- 1 boincer umatlas       529 Oct 13 11:23 boinc_task_state.xml
[2025-10-13 11:24:39] -rw------- 1 boincer umatlas        95 Oct 13 11:23 pilot_heartbeat.json
[2025-10-13 11:24:39] -rw------- 1 boincer umatlas      1050 Oct 13 11:23 memory_monitor_summary.json
[2025-10-13 11:24:39] -rw------- 1 boincer umatlas    349183 Oct 13 11:23 log.46676269._090661.job.log.tgz.1
[2025-10-13 11:24:39] -rw------- 1 boincer umatlas      7854 Oct 13 11:24 heartbeat.json
[2025-10-13 11:24:39] -rw-r--r-- 1 boincer umatlas        27 Oct 13 11:24 wrapper_checkpoint.txt
[2025-10-13 11:24:39] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 11:24 boinc_mmap_file
[2025-10-13 11:24:39] -rw------- 1 boincer umatlas       745 Oct 13 11:24 pilotlog.txt
[2025-10-13 11:24:39] -rw------- 1 boincer umatlas    914890 Oct 13 11:24 log.46676269._090661.job.log.1
[2025-10-13 11:24:39] -rw------- 1 boincer umatlas       357 Oct 13 11:24 output.list
[2025-10-13 11:24:39] -rw-r--r-- 1 boincer umatlas       620 Oct 13 11:24 runtime_log
[2025-10-13 11:24:39] -rw------- 1 boincer umatlas   1280000 Oct 13 11:24 result.tar.gz
[2025-10-13 11:24:39] -rw------- 1 boincer umatlas       658 Oct 13 11:24 Vy1MDmWOJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmK8UMDmcJ4hDm.diag
[2025-10-13 11:24:39] -rw-r--r-- 1 boincer umatlas      8698 Oct 13 11:24 runtime_log.err
[2025-10-13 11:24:39] -rw-r--r-- 1 boincer umatlas     21174 Oct 13 11:24 stderr.txt
[2025-10-13 11:24:39] HITS file was successfully produced:
[2025-10-13 11:24:39] -rw------- 1 boincer umatlas 195559246 Oct 13 11:23 shared/HITS.pool.root.1
[2025-10-13 11:24:39]  *** Contents of shared directory: ***
[2025-10-13 11:24:39] total 405676
[2025-10-13 11:24:39] -rw-r--r-- 2 boincer umatlas 217973139 Oct 13 09:37 ATLAS.root_0
[2025-10-13 11:24:39] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 09:37 start_atlas.sh
[2025-10-13 11:24:39] -rw-r--r-- 2 boincer umatlas    569683 Oct 13 09:37 input.tar.gz
[2025-10-13 11:24:39] -rw------- 1 boincer umatlas 195559246 Oct 13 11:23 HITS.pool.root.1
[2025-10-13 11:24:39] -rw------- 1 boincer umatlas   1280000 Oct 13 11:24 result.tar.gz
11:24:41 (15459): run_atlas exited; CPU time 47680.982387
11:24:41 (15459): called boinc_finish(0)

</stderr_txt>
]]>

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