Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:32:22 (22183): wrapper (7.7.26015): starting
09:32:22 (22183): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 09:32:22] Arguments: --nthreads 12
[2025-10-13 09:32:22] Threads: 12
[2025-10-13 09:32:22] Checking for CVMFS
[2025-10-13 09:32:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:32:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:32:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:32:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:32:22] 2.11.2.0 2991 224340 100152 151662 0 1 15853558 20275200 1 130560 1 110826094 99.984 13506535 12506 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 09:32:22] CVMFS is ok
[2025-10-13 09:32:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:32:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:32:22] Further information can be found at the LHC@home message board.
[2025-10-13 09:32:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:32:22] Checking for apptainer binary...
[2025-10-13 09:32:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:32:22] Running /usr/bin/apptainer --version
[2025-10-13 09:32:22] apptainer version 1.3.2-1.el7
[2025-10-13 09:32:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:32:23] c-205-32.aglt2.org
[2025-10-13 09:32:23] apptainer works
[2025-10-13 09:32:23] Set ATHENA_PROC_NUMBER=12
[2025-10-13 09:32:23] Set ATHENA_CORE_NUMBER=12
[2025-10-13 09:32:23] Starting ATLAS job with PandaID=6842979944
[2025-10-13 09:32:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:49:52]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:49:52]  storage_token=
[2025-10-13 10:49:52]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6842979944/log.46676269._096821.job.log.tgz.1
[2025-10-13 10:49:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/58/50/log.46676269._096821.job.log.tgz.1
[2025-10-13 10:49:52]  workdir=None
[2025-10-13 10:49:52] ]
[2025-10-13 10:49:52] 2025-10-13 14:49:00,501 | INFO     | transferring file log.46676269._096821.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6842979944/log.46676269._096821.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 10:49:52] 2025-10-13 14:49:00,501 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6842979944/log.46676269._096821.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._096821.job
[2025-10-13 10:49:52] 2025-10-13 14:49:00,522 | INFO     | adding to output.list: log.46676269._096821.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/58/50/log.46676269._096821.job.log.tg
[2025-10-13 10:49:52] 2025-10-13 14:49:00,523 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 10:49:52] 2025-10-13 14:49:00,523 | INFO     | summary of transferred files:
[2025-10-13 10:49:52] 2025-10-13 14:49:00,523 | INFO     |  -- lfn=log.46676269._096821.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 10:49:52] 2025-10-13 14:49:00,524 | INFO     | stage-out finished correctly
[2025-10-13 10:49:52] 2025-10-13 14:49:02,157 | INFO     | time since job start (4583s) is within the limit (172800.0s)
[2025-10-13 10:49:52] 2025-10-13 14:49:03,052 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 10:49:52] 2025-10-13 14:49:04,162 | INFO     | time since job start (4585s) is within the limit (172800.0s)
[2025-10-13 10:49:52] 2025-10-13 14:49:05,190 | WARNING  | process 32352 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 10:49:52] 2025-10-13 14:49:05,191 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6842979944/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 10:49:52] 2025-10-13 14:49:05,282 | INFO     | number of running child processes to parent process 32352: 1
[2025-10-13 10:49:52] 2025-10-13 14:49:05,282 | INFO     | maximum number of monitored processes: 6
[2025-10-13 10:49:52] 2025-10-13 14:49:05,961 | INFO     | job 6842979944 has state=finished
[2025-10-13 10:49:52] 2025-10-13 14:49:05,961 | INFO     | preparing for final server update for job 6842979944 in state='finished'
[2025-10-13 10:49:52] 2025-10-13 14:49:06,022 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-13 10:49:52] 2025-10-13 14:49:06,023 | INFO     | this job has now completed (state=finished)
[2025-10-13 10:49:52] 2025-10-13 14:49:06,023 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 10:49:52] 2025-10-13 14:49:06,023 | INFO     | log transfer has been attempted: DONE
[2025-10-13 10:49:52] 2025-10-13 14:49:06,023 | INFO     | job 6842979944 has finished - writing final server update
[2025-10-13 10:49:52] 2025-10-13 14:49:06,024 | INFO     | total number of processed events: 400 (read)
[2025-10-13 10:49:52] 2025-10-13 14:49:06,024 | INFO     | executing command: lscpu
[2025-10-13 10:49:52] 2025-10-13 14:49:06,050 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 10:49:52] 2025-10-13 14:49:06,168 | INFO     | time since job start (4587s) is within the limit (172800.0s)
[2025-10-13 10:49:52] 2025-10-13 14:49:07,785 | INFO     | monitor loop #341: job 0:6842979944 is in state 'finished'
[2025-10-13 10:49:52] 2025-10-13 14:49:07,785 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:49:52] 2025-10-13 14:49:08,174 | INFO     | time since job start (4589s) is within the limit (172800.0s)
[2025-10-13 10:49:52] 2025-10-13 14:49:10,179 | INFO     | time since job start (4591s) is within the limit (172800.0s)
[2025-10-13 10:49:52] 2025-10-13 14:49:10,288 | INFO     | monitor loop #342: job 0:6842979944 is in state 'finished'
[2025-10-13 10:49:52] 2025-10-13 14:49:10,288 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:49:52] 2025-10-13 14:49:11,696 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 10:49:52] 2025-10-13 14:49:11,699 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1673.5833333333333
[2025-10-13 10:49:52] 2025-10-13 14:49:11,701 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6842979944/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 10:49:52] 2025-10-13 14:49:11,702 | INFO     | extracted standard info from prmon json
[2025-10-13 10:49:52] 2025-10-13 14:49:11,702 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 10:49:52] 2025-10-13 14:49:11,703 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 10:49:52] 2025-10-13 14:49:11,703 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 10:49:52] 2025-10-13 14:49:11,703 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:49:52] 2025-10-13 14:49:11,706 | INFO     | fitting pss+swap vs Time
[2025-10-13 10:49:52] 2025-10-13 14:49:11,706 | INFO     | sum of square deviations: 97479037.0
[2025-10-13 10:49:52] 2025-10-13 14:49:11,706 | INFO     | sum of deviations: -6647531821.500001
[2025-10-13 10:49:52] 2025-10-13 14:49:11,707 | INFO     | mean x: 1760364735.5
[2025-10-13 10:49:52] 2025-10-13 14:49:11,707 | INFO     | mean y: 2770942.220588235
[2025-10-13 10:49:52] 2025-10-13 14:49:11,707 | INFO     | -- intersect: 120049921148.29701
[2025-10-13 10:49:52] 2025-10-13 14:49:11,707 | INFO     | intersect: 120049921148.29701
[2025-10-13 10:49:52] 2025-10-13 14:49:11,707 | INFO     | chi2: 0.1199268432489182
[2025-10-13 10:49:52] 2025-10-13 14:49:11,708 | INFO     | -- intersect: 120049921148.29701
[2025-10-13 10:49:52] 2025-10-13 14:49:11,708 | INFO     | current memory leak: -68.19 B/s (using 68 data points, chi2=0.12)
[2025-10-13 10:49:52] 2025-10-13 14:49:11,708 | INFO     | could have reported an average CPU frequency of 2028 MHz (6 samples)
[2025-10-13 10:49:52] 2025-10-13 14:49:11,708 | INFO     | ..............................
[2025-10-13 10:49:52] 2025-10-13 14:49:11,708 | INFO     | . Timing measurements:
[2025-10-13 10:49:52] 2025-10-13 14:49:11,708 | INFO     | . get job = 0 s
[2025-10-13 10:49:52] 2025-10-13 14:49:11,709 | INFO     | . initial setup = 2 s
[2025-10-13 10:49:52] 2025-10-13 14:49:11,709 | INFO     | . payload setup = 7 s
[2025-10-13 10:49:52] 2025-10-13 14:49:11,709 | INFO     | . stage-in = 0 s
[2025-10-13 10:49:52] 2025-10-13 14:49:11,709 | INFO     | . payload execution = 4553 s
[2025-10-13 10:49:52] 2025-10-13 14:49:11,709 | INFO     | . stage-out = 0 s
[2025-10-13 10:49:52] 2025-10-13 14:49:11,709 | INFO     | . log creation = 0 s
[2025-10-13 10:49:52] 2025-10-13 14:49:11,709 | INFO     | ..............................
[2025-10-13 10:49:52] 2025-10-13 14:49:11,792 | INFO     | 
[2025-10-13 10:49:52] 2025-10-13 14:49:11,792 | INFO     | job summary report
[2025-10-13 10:49:52] 2025-10-13 14:49:11,793 | INFO     | --------------------------------------------------
[2025-10-13 10:49:52] 2025-10-13 14:49:11,793 | INFO     | PanDA job id: 6842979944
[2025-10-13 10:49:52] 2025-10-13 14:49:11,793 | INFO     | task id: 46676269
[2025-10-13 10:49:52] 2025-10-13 14:49:11,793 | INFO     | errors: (none)
[2025-10-13 10:49:52] 2025-10-13 14:49:11,793 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:49:52] 2025-10-13 14:49:11,793 | INFO     | pilot state: finished 
[2025-10-13 10:49:52] 2025-10-13 14:49:11,794 | INFO     | transexitcode: 0
[2025-10-13 10:49:52] 2025-10-13 14:49:11,794 | INFO     | exeerrorcode: 0
[2025-10-13 10:49:52] 2025-10-13 14:49:11,794 | INFO     | exeerrordiag: 
[2025-10-13 10:49:52] 2025-10-13 14:49:11,794 | INFO     | exitcode: 0
[2025-10-13 10:49:52] 2025-10-13 14:49:11,794 | INFO     | exitmsg: OK
[2025-10-13 10:49:52] 2025-10-13 14:49:11,794 | INFO     | cpuconsumptiontime: 47625 s
[2025-10-13 10:49:52] 2025-10-13 14:49:11,794 | INFO     | nevents: 400
[2025-10-13 10:49:52] 2025-10-13 14:49:11,795 | INFO     | neventsw: 0
[2025-10-13 10:49:52] 2025-10-13 14:49:11,795 | INFO     | pid: 32352
[2025-10-13 10:49:52] 2025-10-13 14:49:11,795 | INFO     | pgrp: 32352
[2025-10-13 10:49:52] 2025-10-13 14:49:11,795 | INFO     | corecount: 12
[2025-10-13 10:49:52] 2025-10-13 14:49:11,795 | INFO     | event service: False
[2025-10-13 10:49:52] 2025-10-13 14:49:11,795 | INFO     | sizes: {0: 2348529, 1: 2348784, 6: 2349046, 12: 2349074, 4564: 2375179, 4566: 2384177, 4568: 2384361, 4577: 2384555}
[2025-10-13 10:49:52] 2025-10-13 14:49:11,796 | INFO     | --------------------------------------------------
[2025-10-13 10:49:52] 2025-10-13 14:49:11,796 | INFO     | 
[2025-10-13 10:49:52] 2025-10-13 14:49:11,796 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 10:49:52] 2025-10-13 14:49:11,819 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:49:52] 2025-10-13 14:49:11,820 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:49:52] 2025-10-13 14:49:11,820 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:49:52] 2025-10-13 14:49:11,820 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:49:52] 2025-10-13 14:49:11,820 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:49:52] 2025-10-13 14:49:11,820 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:49:52] 2025-10-13 14:49:11,820 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:49:52] 2025-10-13 14:49:11,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:49:52] 2025-10-13 14:49:11,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:49:52] 2025-10-13 14:49:11,821 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:49:52] 2025-10-13 14:49:11,821 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:49:52] 2025-10-13 14:49:11,821 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:49:52] 2025-10-13 14:49:11,821 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:49:52] 2025-10-13 14:49:11,822 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:49:52] 2025-10-13 14:49:11,822 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:49:52] 2025-10-13 14:49:11,822 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:49:52] 2025-10-13 14:49:11,822 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:49:52] 2025-10-13 14:49:11,822 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:49:52] 2025-10-13 14:49:11,822 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:49:52] 2025-10-13 14:49:11,823 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:49:52] 2025-10-13 14:49:11,823 | INFO     | job 6842979944 has completed (purged errors)
[2025-10-13 10:49:52] 2025-10-13 14:49:11,823 | INFO     | overall cleanup function is called
[2025-10-13 10:49:52] 2025-10-13 14:49:12,832 | INFO     | --- collectZombieJob: --- 10, [32352]
[2025-10-13 10:49:52] 2025-10-13 14:49:12,832 | INFO     | zombie collector waiting for pid 32352
[2025-10-13 10:49:52] 2025-10-13 14:49:12,832 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:49:52] 2025-10-13 14:49:12,832 | INFO     | collected zombie processes
[2025-10-13 10:49:52] 2025-10-13 14:49:12,832 | INFO     | will attempt to kill all subprocesses of pid=32352
[2025-10-13 10:49:52] 2025-10-13 14:49:12,924 | INFO     | process IDs to be killed: [32352] (in reverse order)
[2025-10-13 10:49:52] 2025-10-13 14:49:12,974 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:49:52] 2025-10-13 14:49:12,974 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:49:52] 2025-10-13 14:49:12,977 | INFO     | did not find any defunct processes belonging to 32352
[2025-10-13 10:49:52] 2025-10-13 14:49:12,979 | INFO     | did not find any defunct processes belonging to 32352
[2025-10-13 10:49:52] 2025-10-13 14:49:12,979 | INFO     | ready for new job
[2025-10-13 10:49:52] 2025-10-13 14:49:12,979 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:49:52] 2025-10-13 14:49:12,980 | INFO     | ***************************************
[2025-10-13 10:49:52] 2025-10-13 14:49:12,980 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 10:49:52] 2025-10-13 14:49:12,980 | INFO     | ***************************************
[2025-10-13 10:49:52] 2025-10-13 14:49:12,981 | INFO     | 
[2025-10-13 10:49:52] 2025-10-13 14:49:12,981 | INFO     | architecture information:
[2025-10-13 10:49:52] 2025-10-13 14:49:12,982 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:49:52] 2025-10-13 14:49:12,996 | INFO     | cat /etc/os-release:
[2025-10-13 10:49:52] NAME="CentOS Linux"
[2025-10-13 10:49:52] VERSION="7 (Core)"
[2025-10-13 10:49:52] ID="centos"
[2025-10-13 10:49:52] ID_LIKE="rhel fedora"
[2025-10-13 10:49:52] VERSION_ID="7"
[2025-10-13 10:49:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:49:52] ANSI_COLOR="0;31"
[2025-10-13 10:49:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:49:52] HOME_URL="https://www.centos.org/"
[2025-10-13 10:49:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:49:52] 
[2025-10-13 10:49:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:49:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:49:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:49:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:49:52] 
[2025-10-13 10:49:52] 2025-10-13 14:49:12,996 | INFO     | ***************************************
[2025-10-13 10:49:52] 2025-10-13 14:49:13,499 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 10:49:52] 2025-10-13 14:49:13,516 | INFO     | sufficient remaining disk space (29358030848 B)
[2025-10-13 10:49:52] 2025-10-13 14:49:13,516 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:49:52] 2025-10-13 14:49:13,517 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:49:52] 2025-10-13 14:49:13,517 | INFO     | update_server=False
[2025-10-13 10:49:52] 2025-10-13 14:49:13,517 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:49:52] 2025-10-13 14:49:13,517 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:49:52] 2025-10-13 14:49:13,630 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:49:52] 2025-10-13 14:49:13,644 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:49:52] 2025-10-13 14:49:13,803 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:49:52] 2025-10-13 14:49:13,803 | INFO     | aborting loop
[2025-10-13 10:49:52] 2025-10-13 14:49:13,862 | INFO     | all payload control threads have been joined
[2025-10-13 10:49:52] 2025-10-13 14:49:14,025 | INFO     | all data control threads have been joined
[2025-10-13 10:49:52] 2025-10-13 14:49:14,522 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:49:52] 2025-10-13 14:49:14,523 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:49:52] 2025-10-13 14:49:14,550 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:49:52] 2025-10-13 14:49:14,738 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:49:52] 2025-10-13 14:49:14,804 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:49:52] 2025-10-13 14:49:14,868 | INFO     | [payload] control thread has finished
[2025-10-13 10:49:52] 2025-10-13 14:49:15,031 | INFO     | [data] control thread has finished
[2025-10-13 10:49:52] 2025-10-13 14:49:15,158 | INFO     | all job control threads have been joined
[2025-10-13 10:49:52] 2025-10-13 14:49:15,398 | INFO     | [job] validate thread has finished
[2025-10-13 10:49:52] 2025-10-13 14:49:15,558 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:49:52] 2025-10-13 14:49:15,575 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:49:52] 2025-10-13 14:49:15,635 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:49:52] 2025-10-13 14:49:15,796 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:49:52] 2025-10-13 14:49:15,979 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:49:52] 2025-10-13 14:49:16,163 | INFO     | [job] control thread has finished
[2025-10-13 10:49:52] 2025-10-13 14:49:17,650 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:49:52] 2025-10-13 14:49:24,136 | INFO     | job.realtimelogging is not enabled
[2025-10-13 10:49:52] 2025-10-13 14:49:25,140 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:49:52] 2025-10-13 14:49:43,381 | INFO     | PID=25954 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 10:49:52] 2025-10-13 14:49:43,381 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:49:52] 2025-10-13 14:49:43,381 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:49:52] 2025-10-13 14:49:43,381 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:49:52] 2025-10-13 14:49:46,029 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:49:52] 2025-10-13 14:49:47,031 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140579173078848)>', '<ExcThread(monitor, started 140578868143872)>']
[2025-10-13 10:49:52] 2025-10-13 14:49:47,401 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:49:52] 2025-10-13 14:49:47,401 | INFO     | [monitor] control thread has ended
[2025-10-13 10:49:52] 2025-10-13 14:49:52,051 | INFO     | all workflow threads have been joined
[2025-10-13 10:49:52] 2025-10-13 14:49:52,051 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:49:52] 2025-10-13 14:49:52,051 | INFO     | traces error code: 0
[2025-10-13 10:49:52] 2025-10-13 14:49:52,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:49:52] 2025-10-13 14:49:52,145 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:49:52] 2025-10-13 14:49:52,149 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:49:52] 2025-10-13 14:49:52,157 [wrapper] pilotpid: 25954
[2025-10-13 10:49:52] 2025-10-13 14:49:52,160 [wrapper] Pilot exit status: 0
[2025-10-13 10:49:52] 2025-10-13 14:49:52,176 [wrapper] pandaids: 6842979944
[2025-10-13 10:49:52] 2025-10-13 14:49:52,220 [wrapper] cleanup supervisor_pilot 20204 25955
[2025-10-13 10:49:52] 2025-10-13 14:49:52,223 [wrapper] Test setup, not cleaning
[2025-10-13 10:49:52] 2025-10-13 14:49:52,226 [wrapper] apfmon messages muted
[2025-10-13 10:49:52] 2025-10-13 14:49:52,230 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:49:52] 2025-10-13 14:49:52,233 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:49:52]  *** Error codes and diagnostics ***
[2025-10-13 10:49:52]     "exeErrorCode": 0,
[2025-10-13 10:49:52]     "exeErrorDiag": "",
[2025-10-13 10:49:52]     "pilotErrorCode": 0,
[2025-10-13 10:49:52]     "pilotErrorDiag": "",
[2025-10-13 10:49:52]  *** Listing of results directory ***
[2025-10-13 10:49:52] total 418664
[2025-10-13 10:49:52] -rw-r--r-- 1 boincer umatlas    557409 Oct 13 09:04 pilot3.tar.gz
[2025-10-13 10:49:52] -rw-r--r-- 1 boincer umatlas      5112 Oct 13 09:31 queuedata.json
[2025-10-13 10:49:52] -rwx------ 1 boincer umatlas     36292 Oct 13 09:31 runpilot2-wrapper.sh
[2025-10-13 10:49:52] -rw-r--r-- 1 boincer umatlas       100 Oct 13 09:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:49:52] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 09:32 run_atlas
[2025-10-13 10:49:52] -rw-r--r-- 1 boincer umatlas       105 Oct 13 09:32 job.xml
[2025-10-13 10:49:52] -rw-r--r-- 2 boincer umatlas 220568498 Oct 13 09:32 EVNT.46676267._004360.pool.root.1
[2025-10-13 10:49:52] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 09:32 start_atlas.sh
[2025-10-13 10:49:52] drwxrwx--x 2 boincer umatlas      4096 Oct 13 09:32 shared
[2025-10-13 10:49:52] -rw-r--r-- 2 boincer umatlas    569688 Oct 13 09:32 input.tar.gz
[2025-10-13 10:49:52] -rw-r--r-- 1 boincer umatlas         0 Oct 13 09:32 boinc_lockfile
[2025-10-13 10:49:52] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 09:32 pandaJob.out
[2025-10-13 10:49:52] -rw------- 1 boincer umatlas    972489 Oct 13 09:32 agis_schedconf.cvmfs.json
[2025-10-13 10:49:52] -rw------- 1 boincer umatlas   1560580 Oct 13 09:32 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:49:52] drwx------ 5 boincer umatlas      4096 Oct 13 09:32 pilot3
[2025-10-13 10:49:52] -rw------- 1 boincer umatlas 202133963 Oct 13 10:48 HITS.46676269._096821.pool.root.1
[2025-10-13 10:49:52] -rw-r--r-- 1 boincer umatlas      5953 Oct 13 10:48 init_data.xml
[2025-10-13 10:49:52] -rw-r--r-- 1 boincer umatlas       529 Oct 13 10:48 boinc_task_state.xml
[2025-10-13 10:49:52] -rw------- 1 boincer umatlas      1045 Oct 13 10:48 memory_monitor_summary.json
[2025-10-13 10:49:52] -rw------- 1 boincer umatlas    391952 Oct 13 10:49 log.46676269._096821.job.log.tgz.1
[2025-10-13 10:49:52] -rw------- 1 boincer umatlas      7858 Oct 13 10:49 heartbeat.json
[2025-10-13 10:49:52] -rw------- 1 boincer umatlas        95 Oct 13 10:49 pilot_heartbeat.json
[2025-10-13 10:49:52] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 10:49 boinc_mmap_file
[2025-10-13 10:49:52] -rw-r--r-- 1 boincer umatlas        27 Oct 13 10:49 wrapper_checkpoint.txt
[2025-10-13 10:49:52] -rw------- 1 boincer umatlas      4818 Oct 13 10:49 pilotlog.txt
[2025-10-13 10:49:52] -rw------- 1 boincer umatlas    664023 Oct 13 10:49 log.46676269._096821.job.log.1
[2025-10-13 10:49:52] -rw------- 1 boincer umatlas       357 Oct 13 10:49 output.list
[2025-10-13 10:49:52] -rw-r--r-- 1 boincer umatlas       620 Oct 13 10:49 runtime_log
[2025-10-13 10:49:52] -rw------- 1 boincer umatlas   1075200 Oct 13 10:49 result.tar.gz
[2025-10-13 10:49:52] -rw-r--r-- 1 boincer umatlas      8705 Oct 13 10:49 runtime_log.err
[2025-10-13 10:49:52] -rw------- 1 boincer umatlas       659 Oct 13 10:49 bIxKDmbpXS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmUkVMDm0XSCYo.diag
[2025-10-13 10:49:52] -rw-r--r-- 1 boincer umatlas     22181 Oct 13 10:49 stderr.txt
[2025-10-13 10:49:52] HITS file was successfully produced:
[2025-10-13 10:49:52] -rw------- 1 boincer umatlas 202133963 Oct 13 10:48 shared/HITS.pool.root.1
[2025-10-13 10:49:52]  *** Contents of shared directory: ***
[2025-10-13 10:49:52] total 414428
[2025-10-13 10:49:52] -rw-r--r-- 2 boincer umatlas 220568498 Oct 13 09:32 ATLAS.root_0
[2025-10-13 10:49:52] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 09:32 start_atlas.sh
[2025-10-13 10:49:52] -rw-r--r-- 2 boincer umatlas    569688 Oct 13 09:32 input.tar.gz
[2025-10-13 10:49:52] -rw------- 1 boincer umatlas 202133963 Oct 13 10:48 HITS.pool.root.1
[2025-10-13 10:49:52] -rw------- 1 boincer umatlas   1075200 Oct 13 10:49 result.tar.gz
10:49:54 (22183): run_atlas exited; CPU time 47606.117775
10:49:54 (22183): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN