Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:27:33 (22510): wrapper (7.7.26015): starting
09:27:33 (22510): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 09:27:33] Arguments: --nthreads 8
[2025-10-13 09:27:33] Threads: 8
[2025-10-13 09:27:33] Checking for CVMFS
[2025-10-13 09:27:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:27:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:27:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:27:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:27:34] 2.11.2.0 24877 54382 127896 151662 3 57 14516383 18432001 917 130560 0 50777610 99.977 2316143 37577 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 09:27:34] CVMFS is ok
[2025-10-13 09:27:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:27:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:27:34] Further information can be found at the LHC@home message board.
[2025-10-13 09:27:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:27:34] Checking for apptainer binary...
[2025-10-13 09:27:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:27:34] Running /usr/bin/apptainer --version
[2025-10-13 09:27:34] apptainer version 1.3.2-1.el7
[2025-10-13 09:27:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:27:35] c-206-3.aglt2.org
[2025-10-13 09:27:35] apptainer works
[2025-10-13 09:27:35] Set ATHENA_PROC_NUMBER=8
[2025-10-13 09:27:35] Set ATHENA_CORE_NUMBER=8
[2025-10-13 09:27:35] Starting ATLAS job with PandaID=6839659773
[2025-10-13 09:27:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:11:05]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:11:05] 2025-10-13 16:10:10,549 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 12:11:05] 2025-10-13 16:10:10,549 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 12:11:05] 2025-10-13 16:10:10,552 | INFO     | fitting pss+swap vs Time
[2025-10-13 12:11:05] 2025-10-13 16:10:10,552 | INFO     | sum of square deviations: 1270051720.0
[2025-10-13 12:11:05] 2025-10-13 16:10:10,553 | INFO     | sum of deviations: -4893423781.999998
[2025-10-13 12:11:05] 2025-10-13 16:10:10,553 | INFO     | mean x: 1760366936.5
[2025-10-13 12:11:05] 2025-10-13 16:10:10,553 | INFO     | mean y: 2474705.2125
[2025-10-13 12:11:05] 2025-10-13 16:10:10,553 | INFO     | -- intersect: 6785050010.189513
[2025-10-13 12:11:05] 2025-10-13 16:10:10,553 | INFO     | intersect: 6785050010.189513
[2025-10-13 12:11:05] 2025-10-13 16:10:10,554 | INFO     | chi2: 1.9748545583091968
[2025-10-13 12:11:05] 2025-10-13 16:10:10,554 | INFO     | sum of square deviations: 1154663510.0
[2025-10-13 12:11:05] 2025-10-13 16:10:10,555 | INFO     | sum of deviations: 5666368140.999999
[2025-10-13 12:11:05] 2025-10-13 16:10:10,555 | INFO     | mean x: 1760366784.0
[2025-10-13 12:11:05] 2025-10-13 16:10:10,555 | INFO     | mean y: 2488309.535483871
[2025-10-13 12:11:05] 2025-10-13 16:10:10,555 | INFO     | -- intersect: -8636293616.925695
[2025-10-13 12:11:05] 2025-10-13 16:10:10,555 | INFO     | intersect: -8636293616.925695
[2025-10-13 12:11:05] 2025-10-13 16:10:10,555 | INFO     | chi2: 1.2004397947862337
[2025-10-13 12:11:05] 2025-10-13 16:10:10,555 | INFO     | current chi2=1.2004397947862337 (change=39.21376185727776 %)
[2025-10-13 12:11:05] 2025-10-13 16:10:10,556 | INFO     | sum of square deviations: 1046484737.5
[2025-10-13 12:11:05] 2025-10-13 16:10:10,556 | INFO     | sum of deviations: 5518698456.5
[2025-10-13 12:11:05] 2025-10-13 16:10:10,556 | INFO     | mean x: 1760366631.5
[2025-10-13 12:11:05] 2025-10-13 16:10:10,557 | INFO     | mean y: 2488101.34
[2025-10-13 12:11:05] 2025-10-13 16:10:10,557 | INFO     | -- intersect: -9280908267.480099
[2025-10-13 12:11:05] 2025-10-13 16:10:10,557 | INFO     | intersect: -9280908267.480099
[2025-10-13 12:11:05] 2025-10-13 16:10:10,557 | INFO     | chi2: 1.2012352799678883
[2025-10-13 12:11:05] 2025-10-13 16:10:10,557 | INFO     | current chi2=1.2012352799678883 (change=-0.06626614555011183 %)
[2025-10-13 12:11:05] 2025-10-13 16:10:10,557 | INFO     | right removable region: 149
[2025-10-13 12:11:05] 2025-10-13 16:10:10,557 | INFO     | sum of square deviations: 1154663510.0
[2025-10-13 12:11:05] 2025-10-13 16:10:10,558 | INFO     | sum of deviations: -23204512179.0
[2025-10-13 12:11:05] 2025-10-13 16:10:10,558 | INFO     | mean x: 1760367089.0
[2025-10-13 12:11:05] 2025-10-13 16:10:10,558 | INFO     | mean y: 2498473.812903226
[2025-10-13 12:11:05] 2025-10-13 16:10:10,558 | INFO     | -- intersect: 35379436605.52132
[2025-10-13 12:11:05] 2025-10-13 16:10:10,559 | INFO     | intersect: 35379436605.52132
[2025-10-13 12:11:05] 2025-10-13 16:10:10,559 | INFO     | chi2: 0.8320464901954989
[2025-10-13 12:11:05] 2025-10-13 16:10:10,559 | INFO     | current chi2=0.8320464901954989 (change=57.867961126825016 %)
[2025-10-13 12:11:05] 2025-10-13 16:10:10,559 | INFO     | sum of square deviations: 1046484737.5
[2025-10-13 12:11:05] 2025-10-13 16:10:10,560 | INFO     | sum of deviations: -21415830193.5
[2025-10-13 12:11:05] 2025-10-13 16:10:10,560 | INFO     | mean x: 1760367241.5
[2025-10-13 12:11:05] 2025-10-13 16:10:10,560 | INFO     | mean y: 2495950.1266666665
[2025-10-13 12:11:05] 2025-10-13 16:10:10,560 | INFO     | -- intersect: 36027604173.13503
[2025-10-13 12:11:05] 2025-10-13 16:10:10,560 | INFO     | intersect: 36027604173.13503
[2025-10-13 12:11:05] 2025-10-13 16:10:10,560 | INFO     | chi2: 0.8324618262984643
[2025-10-13 12:11:05] 2025-10-13 16:10:10,561 | INFO     | current chi2=0.8324618262984643 (change=-0.049917415416032146 %)
[2025-10-13 12:11:05] 2025-10-13 16:10:10,561 | INFO     | left removable region: 20
[2025-10-13 12:11:05] 2025-10-13 16:10:10,561 | INFO     | sum of square deviations: 665612480.0
[2025-10-13 12:11:05] 2025-10-13 16:10:10,561 | INFO     | sum of deviations: -6750346802.999999
[2025-10-13 12:11:05] 2025-10-13 16:10:10,562 | INFO     | mean x: 1760367211.0
[2025-10-13 12:11:05] 2025-10-13 16:10:10,562 | INFO     | mean y: 2504953.689922481
[2025-10-13 12:11:05] 2025-10-13 16:10:10,562 | INFO     | -- intersect: 17855369093.01597
[2025-10-13 12:11:05] 2025-10-13 16:10:10,562 | INFO     | intersect: 17855369093.01597
[2025-10-13 12:11:05] 2025-10-13 16:10:10,562 | INFO     | chi2: 0.029595791914707265
[2025-10-13 12:11:05] 2025-10-13 16:10:10,562 | INFO     | -- intersect: 17855369093.01597
[2025-10-13 12:11:05] 2025-10-13 16:10:10,562 | INFO     | current memory leak: -10.14 B/s (using 129 data points, chi2=0.03)
[2025-10-13 12:11:05] 2025-10-13 16:10:10,563 | INFO     | could have reported an average CPU frequency of 2348 MHz (9 samples)
[2025-10-13 12:11:05] 2025-10-13 16:10:10,563 | INFO     | ..............................
[2025-10-13 12:11:05] 2025-10-13 16:10:10,563 | INFO     | . Timing measurements:
[2025-10-13 12:11:05] 2025-10-13 16:10:10,563 | INFO     | . get job = 0 s
[2025-10-13 12:11:05] 2025-10-13 16:10:10,563 | INFO     | . initial setup = 2 s
[2025-10-13 12:11:05] 2025-10-13 16:10:10,563 | INFO     | . payload setup = 4 s
[2025-10-13 12:11:05] 2025-10-13 16:10:10,563 | INFO     | . stage-in = 0 s
[2025-10-13 12:11:05] 2025-10-13 16:10:10,563 | INFO     | . payload execution = 9717 s
[2025-10-13 12:11:05] 2025-10-13 16:10:10,564 | INFO     | . stage-out = 0 s
[2025-10-13 12:11:05] 2025-10-13 16:10:10,564 | INFO     | . log creation = 0 s
[2025-10-13 12:11:05] 2025-10-13 16:10:10,564 | INFO     | ..............................
[2025-10-13 12:11:05] 2025-10-13 16:10:11,142 | INFO     | 
[2025-10-13 12:11:05] 2025-10-13 16:10:11,142 | INFO     | job summary report
[2025-10-13 12:11:05] 2025-10-13 16:10:11,142 | INFO     | --------------------------------------------------
[2025-10-13 12:11:05] 2025-10-13 16:10:11,142 | INFO     | PanDA job id: 6839659773
[2025-10-13 12:11:05] 2025-10-13 16:10:11,142 | INFO     | task id: 46676269
[2025-10-13 12:11:05] 2025-10-13 16:10:11,142 | INFO     | errors: (none)
[2025-10-13 12:11:05] 2025-10-13 16:10:11,143 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 12:11:05] 2025-10-13 16:10:11,143 | INFO     | pilot state: finished 
[2025-10-13 12:11:05] 2025-10-13 16:10:11,143 | INFO     | transexitcode: 0
[2025-10-13 12:11:05] 2025-10-13 16:10:11,143 | INFO     | exeerrorcode: 0
[2025-10-13 12:11:05] 2025-10-13 16:10:11,143 | INFO     | exeerrordiag: 
[2025-10-13 12:11:05] 2025-10-13 16:10:11,143 | INFO     | exitcode: 0
[2025-10-13 12:11:05] 2025-10-13 16:10:11,143 | INFO     | exitmsg: OK
[2025-10-13 12:11:05] 2025-10-13 16:10:11,143 | INFO     | cpuconsumptiontime: 74577 s
[2025-10-13 12:11:05] 2025-10-13 16:10:11,143 | INFO     | nevents: 400
[2025-10-13 12:11:05] 2025-10-13 16:10:11,143 | INFO     | neventsw: 0
[2025-10-13 12:11:05] 2025-10-13 16:10:11,144 | INFO     | pid: 305
[2025-10-13 12:11:05] 2025-10-13 16:10:11,144 | INFO     | pgrp: 305
[2025-10-13 12:11:05] 2025-10-13 16:10:11,144 | INFO     | corecount: 8
[2025-10-13 12:11:05] 2025-10-13 16:10:11,144 | INFO     | event service: False
[2025-10-13 12:11:05] 2025-10-13 16:10:11,144 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 9725: 2377722, 9726: 2386720, 9727: 2386776, 9732: 2387162}
[2025-10-13 12:11:05] 2025-10-13 16:10:11,144 | INFO     | --------------------------------------------------
[2025-10-13 12:11:05] 2025-10-13 16:10:11,144 | INFO     | 
[2025-10-13 12:11:05] 2025-10-13 16:10:11,144 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 12:11:05] 2025-10-13 16:10:11,159 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 12:11:05] 2025-10-13 16:10:11,159 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 12:11:05] 2025-10-13 16:10:11,160 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 12:11:05] 2025-10-13 16:10:11,160 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 12:11:05] 2025-10-13 16:10:11,160 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 12:11:05] 2025-10-13 16:10:11,160 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 12:11:05] 2025-10-13 16:10:11,160 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 12:11:05] 2025-10-13 16:10:11,160 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 12:11:05] 2025-10-13 16:10:11,160 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 12:11:05] 2025-10-13 16:10:11,160 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 12:11:05] 2025-10-13 16:10:11,160 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 12:11:05] 2025-10-13 16:10:11,161 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 12:11:05] 2025-10-13 16:10:11,161 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 12:11:05] 2025-10-13 16:10:11,161 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 12:11:05] 2025-10-13 16:10:11,161 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 12:11:05] 2025-10-13 16:10:11,161 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 12:11:05] 2025-10-13 16:10:11,161 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 12:11:05] 2025-10-13 16:10:11,161 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 12:11:05] 2025-10-13 16:10:11,161 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 12:11:05] 2025-10-13 16:10:11,161 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 12:11:05] 2025-10-13 16:10:11,162 | INFO     | job 6839659773 has completed (purged errors)
[2025-10-13 12:11:05] 2025-10-13 16:10:11,162 | INFO     | overall cleanup function is called
[2025-10-13 12:11:05] 2025-10-13 16:10:12,168 | INFO     | --- collectZombieJob: --- 10, [305]
[2025-10-13 12:11:05] 2025-10-13 16:10:12,168 | INFO     | zombie collector waiting for pid 305
[2025-10-13 12:11:05] 2025-10-13 16:10:12,168 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 12:11:05] 2025-10-13 16:10:12,169 | INFO     | collected zombie processes
[2025-10-13 12:11:05] 2025-10-13 16:10:12,169 | INFO     | will attempt to kill all subprocesses of pid=305
[2025-10-13 12:11:05] 2025-10-13 16:10:12,269 | INFO     | process IDs to be killed: [305] (in reverse order)
[2025-10-13 12:11:05] 2025-10-13 16:10:12,391 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 12:11:05] 2025-10-13 16:10:12,392 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 12:11:05] 2025-10-13 16:10:12,394 | INFO     | did not find any defunct processes belonging to 305
[2025-10-13 12:11:05] 2025-10-13 16:10:12,397 | INFO     | did not find any defunct processes belonging to 305
[2025-10-13 12:11:05] 2025-10-13 16:10:12,397 | INFO     | ready for new job
[2025-10-13 12:11:05] 2025-10-13 16:10:12,397 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 12:11:05] 2025-10-13 16:10:12,399 | INFO     | ***************************************
[2025-10-13 12:11:05] 2025-10-13 16:10:12,399 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 12:11:05] 2025-10-13 16:10:12,399 | INFO     | ***************************************
[2025-10-13 12:11:05] 2025-10-13 16:10:12,399 | INFO     | 
[2025-10-13 12:11:05] 2025-10-13 16:10:12,400 | INFO     | architecture information:
[2025-10-13 12:11:05] 2025-10-13 16:10:12,400 | INFO     | executing command: cat /etc/os-release
[2025-10-13 12:11:05] 2025-10-13 16:10:12,411 | INFO     | cat /etc/os-release:
[2025-10-13 12:11:05] NAME="CentOS Linux"
[2025-10-13 12:11:05] VERSION="7 (Core)"
[2025-10-13 12:11:05] ID="centos"
[2025-10-13 12:11:05] ID_LIKE="rhel fedora"
[2025-10-13 12:11:05] VERSION_ID="7"
[2025-10-13 12:11:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:11:05] ANSI_COLOR="0;31"
[2025-10-13 12:11:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:11:05] HOME_URL="https://www.centos.org/"
[2025-10-13 12:11:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:11:05] 
[2025-10-13 12:11:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:11:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:11:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:11:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:11:05] 
[2025-10-13 12:11:05] 2025-10-13 16:10:12,411 | INFO     | ***************************************
[2025-10-13 12:11:05] 2025-10-13 16:10:12,913 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 12:11:05] 2025-10-13 16:10:12,926 | INFO     | sufficient remaining disk space (28716302336 B)
[2025-10-13 12:11:05] 2025-10-13 16:10:12,927 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:11:05] 2025-10-13 16:10:12,927 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:11:05] 2025-10-13 16:10:12,927 | INFO     | update_server=False
[2025-10-13 12:11:05] 2025-10-13 16:10:12,927 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:11:05] 2025-10-13 16:10:12,927 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:11:05] 2025-10-13 16:10:12,929 | INFO     | all job control threads have been joined
[2025-10-13 12:11:05] 2025-10-13 16:10:13,053 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:11:05] 2025-10-13 16:10:13,568 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:11:05] 2025-10-13 16:10:13,568 | INFO     | aborting loop
[2025-10-13 12:11:05] 2025-10-13 16:10:13,689 | INFO     | all data control threads have been joined
[2025-10-13 12:11:05] 2025-10-13 16:10:13,932 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:11:05] 2025-10-13 16:10:13,934 | INFO     | [job] control thread has finished
[2025-10-13 12:11:05] 2025-10-13 16:10:14,169 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:11:05] 2025-10-13 16:10:14,320 | INFO     | all payload control threads have been joined
[2025-10-13 12:11:05] 2025-10-13 16:10:14,413 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:11:05] 2025-10-13 16:10:14,457 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:11:05] 2025-10-13 16:10:14,460 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:11:05] 2025-10-13 16:10:14,574 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:11:05] 2025-10-13 16:10:14,694 | INFO     | [data] control thread has finished
[2025-10-13 12:11:05] 2025-10-13 16:10:15,058 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:11:05] 2025-10-13 16:10:15,079 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:11:05] 2025-10-13 16:10:15,248 | INFO     | [job] validate thread has finished
[2025-10-13 12:11:05] 2025-10-13 16:10:15,287 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:11:05] 2025-10-13 16:10:15,320 | INFO     | [payload] control thread has finished
[2025-10-13 12:11:05] 2025-10-13 16:10:15,656 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:11:05] 2025-10-13 16:10:16,659 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:11:05] 2025-10-13 16:10:16,931 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:11:05] 2025-10-13 16:10:23,526 | INFO     | job.realtimelogging is not enabled
[2025-10-13 12:11:05] 2025-10-13 16:10:24,528 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:11:05] 2025-10-13 16:10:43,131 | INFO     | PID=26285 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 12:11:05] 2025-10-13 16:10:43,132 | INFO     | .. there are 3 such processes running
[2025-10-13 12:11:05] 2025-10-13 16:10:43,132 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:11:05] 2025-10-13 16:10:43,132 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:11:05] 2025-10-13 16:10:43,132 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:11:05] 2025-10-13 16:10:59,093 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:11:05] 2025-10-13 16:10:59,750 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140312811726656)>', '<ExcThread(monitor, started 140312135587584)>']
[2025-10-13 12:11:05] 2025-10-13 16:11:00,207 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:11:05] 2025-10-13 16:11:00,207 | INFO     | [monitor] control thread has ended
[2025-10-13 12:11:05] 2025-10-13 16:11:04,776 | INFO     | all workflow threads have been joined
[2025-10-13 12:11:05] 2025-10-13 16:11:04,776 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:11:05] 2025-10-13 16:11:04,777 | INFO     | traces error code: 0
[2025-10-13 12:11:05] 2025-10-13 16:11:04,777 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:11:05] 2025-10-13 16:11:04,912 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:11:05] 2025-10-13 16:11:04,914 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:11:05] 2025-10-13 16:11:04,916 [wrapper] pilotpid: 26285
[2025-10-13 12:11:05] 2025-10-13 16:11:04,918 [wrapper] Pilot exit status: 0
[2025-10-13 12:11:05] 2025-10-13 16:11:04,928 [wrapper] pandaids: 6839659773
[2025-10-13 12:11:05] 2025-10-13 16:11:04,962 [wrapper] cleanup supervisor_pilot  3590 26286
[2025-10-13 12:11:05] 2025-10-13 16:11:04,964 [wrapper] Test setup, not cleaning
[2025-10-13 12:11:05] 2025-10-13 16:11:04,968 [wrapper] apfmon messages muted
[2025-10-13 12:11:05] 2025-10-13 16:11:04,971 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:11:05] 2025-10-13 16:11:04,974 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:11:05]  *** Error codes and diagnostics ***
[2025-10-13 12:11:05]     "exeErrorCode": 0,
[2025-10-13 12:11:05]     "exeErrorDiag": "",
[2025-10-13 12:11:05]     "pilotErrorCode": 0,
[2025-10-13 12:11:05]     "pilotErrorDiag": "",
[2025-10-13 12:11:05]  *** Listing of results directory ***
[2025-10-13 12:11:05] total 412364
[2025-10-13 12:11:05] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 02:54 pilot3.tar.gz
[2025-10-13 12:11:05] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 03:43 queuedata.json
[2025-10-13 12:11:05] -rwx------ 1 boincer umatlas     36292 Oct 12 03:45 runpilot2-wrapper.sh
[2025-10-13 12:11:05] -rw-r--r-- 1 boincer umatlas       100 Oct 13 09:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:11:05] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 09:27 run_atlas
[2025-10-13 12:11:05] -rw-r--r-- 1 boincer umatlas       105 Oct 13 09:27 job.xml
[2025-10-13 12:11:05] -rw-r--r-- 2 boincer umatlas 222131751 Oct 13 09:27 EVNT.46676267._003511.pool.root.1
[2025-10-13 12:11:05] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 09:27 start_atlas.sh
[2025-10-13 12:11:05] drwxrwx--x 2 boincer umatlas      4096 Oct 13 09:27 shared
[2025-10-13 12:11:05] -rw-r--r-- 2 boincer umatlas    569683 Oct 13 09:27 input.tar.gz
[2025-10-13 12:11:05] -rw-r--r-- 1 boincer umatlas         0 Oct 13 09:27 boinc_lockfile
[2025-10-13 12:11:05] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 09:27 pandaJob.out
[2025-10-13 12:11:05] -rw------- 1 boincer umatlas    972489 Oct 13 09:27 agis_schedconf.cvmfs.json
[2025-10-13 12:11:05] -rw------- 1 boincer umatlas   1560580 Oct 13 09:27 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:11:05] drwx------ 5 boincer umatlas      4096 Oct 13 09:27 pilot3
[2025-10-13 12:11:05] -rw-r--r-- 1 boincer umatlas       529 Oct 13 12:09 boinc_task_state.xml
[2025-10-13 12:11:05] -rw------- 1 boincer umatlas 192670951 Oct 13 12:09 HITS.46676269._073752.pool.root.1
[2025-10-13 12:11:05] -rw-r--r-- 1 boincer umatlas      5950 Oct 13 12:09 init_data.xml
[2025-10-13 12:11:05] -rw------- 1 boincer umatlas      1053 Oct 13 12:10 memory_monitor_summary.json
[2025-10-13 12:11:05] -rw------- 1 boincer umatlas    400472 Oct 13 12:10 log.46676269._073752.job.log.tgz.1
[2025-10-13 12:11:05] -rw------- 1 boincer umatlas      7853 Oct 13 12:10 heartbeat.json
[2025-10-13 12:11:05] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 12:10 boinc_mmap_file
[2025-10-13 12:11:05] -rw-r--r-- 1 boincer umatlas        27 Oct 13 12:10 wrapper_checkpoint.txt
[2025-10-13 12:11:05] -rw------- 1 boincer umatlas        95 Oct 13 12:10 pilot_heartbeat.json
[2025-10-13 12:11:05] -rw------- 1 boincer umatlas      4893 Oct 13 12:11 pilotlog.txt
[2025-10-13 12:11:05] -rw------- 1 boincer umatlas   1378066 Oct 13 12:11 log.46676269._073752.job.log.1
[2025-10-13 12:11:05] -rw------- 1 boincer umatlas       357 Oct 13 12:11 output.list
[2025-10-13 12:11:05] -rw-r--r-- 1 boincer umatlas       620 Oct 13 12:11 runtime_log
[2025-10-13 12:11:05] -rw------- 1 boincer umatlas   1802240 Oct 13 12:11 result.tar.gz
[2025-10-13 12:11:05] -rw-r--r-- 1 boincer umatlas      8698 Oct 13 12:11 runtime_log.err
[2025-10-13 12:11:05] -rw------- 1 boincer umatlas       659 Oct 13 12:11 FZlLDmrw5R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmkTTMDmk1BCWn.diag
[2025-10-13 12:11:05] -rw-r--r-- 1 boincer umatlas     20817 Oct 13 12:11 stderr.txt
[2025-10-13 12:11:05] HITS file was successfully produced:
[2025-10-13 12:11:05] -rw------- 1 boincer umatlas 192670951 Oct 13 12:09 shared/HITS.pool.root.1
[2025-10-13 12:11:05]  *** Contents of shared directory: ***
[2025-10-13 12:11:05] total 407424
[2025-10-13 12:11:05] -rw-r--r-- 2 boincer umatlas 222131751 Oct 13 09:27 ATLAS.root_0
[2025-10-13 12:11:05] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 09:27 start_atlas.sh
[2025-10-13 12:11:05] -rw-r--r-- 2 boincer umatlas    569683 Oct 13 09:27 input.tar.gz
[2025-10-13 12:11:05] -rw------- 1 boincer umatlas 192670951 Oct 13 12:09 HITS.pool.root.1
[2025-10-13 12:11:05] -rw------- 1 boincer umatlas   1802240 Oct 13 12:11 result.tar.gz
12:11:06 (22510): run_atlas exited; CPU time 74702.124868
12:11:06 (22510): called boinc_finish(0)

</stderr_txt>
]]>

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