Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:27:40 (2131117): wrapper (7.7.26015): starting
09:27:40 (2131117): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 09:27:40] Arguments: --nthreads 8
[2025-10-13 09:27:40] Threads: 8
[2025-10-13 09:27:40] Checking for CVMFS
[2025-10-13 09:27:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:27:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:27:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:27:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:27:41] 2.13.2.0 1863115 17161 184608 151475 -7124 1588 20322062 32503808 29451 16776704 0 114366972 99.670 104931042 17394 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 09:27:41] CVMFS is ok
[2025-10-13 09:27:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:27:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:27:41] Further information can be found at the LHC@home message board.
[2025-10-13 09:27:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:27:41] Checking for apptainer binary...
[2025-10-13 09:27:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:27:41] Running /usr/bin/apptainer --version
[2025-10-13 09:27:41] apptainer version 1.4.3-1.el9
[2025-10-13 09:27:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:27:41] c7-3-16.aglt2.org
[2025-10-13 09:27:41] apptainer works
[2025-10-13 09:27:41] Set ATHENA_PROC_NUMBER=8
[2025-10-13 09:27:41] Set ATHENA_CORE_NUMBER=8
[2025-10-13 09:27:41] Starting ATLAS job with PandaID=6832429137
[2025-10-13 09:27:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:12:19]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:12:19] 2025-10-13 16:11:35,942 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 12:12:19] 2025-10-13 16:11:35,942 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 12:12:19] 2025-10-13 16:11:35,945 | INFO     | fitting pss+swap vs Time
[2025-10-13 12:12:19] 2025-10-13 16:11:35,945 | INFO     | sum of square deviations: 1294014960.0
[2025-10-13 12:12:19] 2025-10-13 16:11:35,946 | INFO     | sum of deviations: 29199955983.0
[2025-10-13 12:12:19] 2025-10-13 16:11:35,946 | INFO     | mean x: 1760366987.0
[2025-10-13 12:12:19] 2025-10-13 16:11:35,946 | INFO     | mean y: 2220243.645962733
[2025-10-13 12:12:19] 2025-10-13 16:11:35,946 | INFO     | -- intersect: -39721152455.48136
[2025-10-13 12:12:19] 2025-10-13 16:11:35,947 | INFO     | intersect: -39721152455.48136
[2025-10-13 12:12:19] 2025-10-13 16:11:35,947 | INFO     | chi2: 2.2391271460116156
[2025-10-13 12:12:19] 2025-10-13 16:11:35,947 | INFO     | sum of square deviations: 1177156955.0
[2025-10-13 12:12:19] 2025-10-13 16:11:35,948 | INFO     | sum of deviations: 37725090405.00001
[2025-10-13 12:12:19] 2025-10-13 16:11:35,948 | INFO     | mean x: 1760366834.5
[2025-10-13 12:12:19] 2025-10-13 16:11:35,948 | INFO     | mean y: 2231021.923076923
[2025-10-13 12:12:19] 2025-10-13 16:11:35,948 | INFO     | -- intersect: -56413353743.89618
[2025-10-13 12:12:19] 2025-10-13 16:11:35,948 | INFO     | intersect: -56413353743.89618
[2025-10-13 12:12:19] 2025-10-13 16:11:35,948 | INFO     | chi2: 1.4003658200236173
[2025-10-13 12:12:19] 2025-10-13 16:11:35,949 | INFO     | current chi2=1.4003658200236173 (change=37.45929870405167 %)
[2025-10-13 12:12:19] 2025-10-13 16:11:35,949 | INFO     | sum of square deviations: 1067554900.0
[2025-10-13 12:12:19] 2025-10-13 16:11:35,950 | INFO     | sum of deviations: 35310424437.0
[2025-10-13 12:12:19] 2025-10-13 16:11:35,950 | INFO     | mean x: 1760366682.0
[2025-10-13 12:12:19] 2025-10-13 16:11:35,950 | INFO     | mean y: 2227659.9602649007
[2025-10-13 12:12:19] 2025-10-13 16:11:35,950 | INFO     | -- intersect: -58223625367.52657
[2025-10-13 12:12:19] 2025-10-13 16:11:35,950 | INFO     | intersect: -58223625367.52657
[2025-10-13 12:12:19] 2025-10-13 16:11:35,950 | INFO     | chi2: 1.4007534849139014
[2025-10-13 12:12:19] 2025-10-13 16:11:35,950 | INFO     | current chi2=1.4007534849139014 (change=-0.027683115707404258 %)
[2025-10-13 12:12:19] 2025-10-13 16:11:35,950 | INFO     | right removable region: 150
[2025-10-13 12:12:19] 2025-10-13 16:11:35,950 | INFO     | sum of square deviations: 1177156955.0
[2025-10-13 12:12:19] 2025-10-13 16:11:35,951 | INFO     | sum of deviations: 5693109382.000002
[2025-10-13 12:12:19] 2025-10-13 16:11:35,951 | INFO     | mean x: 1760367139.5
[2025-10-13 12:12:19] 2025-10-13 16:11:35,951 | INFO     | mean y: 2250616.5897435895
[2025-10-13 12:12:19] 2025-10-13 16:11:35,951 | INFO     | -- intersect: -8511450666.050137
[2025-10-13 12:12:19] 2025-10-13 16:11:35,952 | INFO     | intersect: -8511450666.050137
[2025-10-13 12:12:19] 2025-10-13 16:11:35,952 | INFO     | chi2: 0.9037039899257181
[2025-10-13 12:12:19] 2025-10-13 16:11:35,952 | INFO     | current chi2=0.9037039899257181 (change=59.64034505430313 %)
[2025-10-13 12:12:19] 2025-10-13 16:11:35,952 | INFO     | sum of square deviations: 1067554900.0
[2025-10-13 12:12:19] 2025-10-13 16:11:35,953 | INFO     | sum of deviations: 2930877736.0
[2025-10-13 12:12:19] 2025-10-13 16:11:35,953 | INFO     | mean x: 1760367292.0
[2025-10-13 12:12:19] 2025-10-13 16:11:35,953 | INFO     | mean y: 2254445.536423841
[2025-10-13 12:12:19] 2025-10-13 16:11:35,953 | INFO     | -- intersect: -4830678552.387534
[2025-10-13 12:12:19] 2025-10-13 16:11:35,953 | INFO     | intersect: -4830678552.387534
[2025-10-13 12:12:19] 2025-10-13 16:11:35,953 | INFO     | chi2: 0.8974568610238487
[2025-10-13 12:12:19] 2025-10-13 16:11:35,953 | INFO     | current chi2=0.8974568610238487 (change=0.6912804382309853 %)
[2025-10-13 12:12:19] 2025-10-13 16:11:35,953 | INFO     | left removable region: 20
[2025-10-13 12:12:19] 2025-10-13 16:11:35,954 | INFO     | sum of square deviations: 681212772.5
[2025-10-13 12:12:19] 2025-10-13 16:11:35,954 | INFO     | sum of deviations: 7874458707.000001
[2025-10-13 12:12:19] 2025-10-13 16:11:35,954 | INFO     | mean x: 1760367261.5
[2025-10-13 12:12:19] 2025-10-13 16:11:35,954 | INFO     | mean y: 2267940.2461538464
[2025-10-13 12:12:19] 2025-10-13 16:11:35,954 | INFO     | -- intersect: -20346644865.607647
[2025-10-13 12:12:19] 2025-10-13 16:11:35,955 | INFO     | intersect: -20346644865.607647
[2025-10-13 12:12:19] 2025-10-13 16:11:35,955 | INFO     | chi2: 0.03379248620256018
[2025-10-13 12:12:19] 2025-10-13 16:11:35,955 | INFO     | -- intersect: -20346644865.607647
[2025-10-13 12:12:19] 2025-10-13 16:11:35,955 | INFO     | current memory leak: 11.56 B/s (using 130 data points, chi2=0.03)
[2025-10-13 12:12:19] 2025-10-13 16:11:35,955 | INFO     | could have reported an average CPU frequency of 3107 MHz (9 samples)
[2025-10-13 12:12:19] 2025-10-13 16:11:35,956 | INFO     | ..............................
[2025-10-13 12:12:19] 2025-10-13 16:11:35,956 | INFO     | . Timing measurements:
[2025-10-13 12:12:19] 2025-10-13 16:11:35,956 | INFO     | . get job = 0 s
[2025-10-13 12:12:19] 2025-10-13 16:11:35,956 | INFO     | . initial setup = 2 s
[2025-10-13 12:12:19] 2025-10-13 16:11:35,956 | INFO     | . payload setup = 7 s
[2025-10-13 12:12:19] 2025-10-13 16:11:35,956 | INFO     | . stage-in = 0 s
[2025-10-13 12:12:19] 2025-10-13 16:11:35,956 | INFO     | . payload execution = 9785 s
[2025-10-13 12:12:19] 2025-10-13 16:11:35,956 | INFO     | . stage-out = 0 s
[2025-10-13 12:12:19] 2025-10-13 16:11:35,956 | INFO     | . log creation = 0 s
[2025-10-13 12:12:19] 2025-10-13 16:11:35,956 | INFO     | ..............................
[2025-10-13 12:12:19] 2025-10-13 16:11:36,034 | INFO     | 
[2025-10-13 12:12:19] 2025-10-13 16:11:36,035 | INFO     | job summary report
[2025-10-13 12:12:19] 2025-10-13 16:11:36,035 | INFO     | --------------------------------------------------
[2025-10-13 12:12:19] 2025-10-13 16:11:36,035 | INFO     | PanDA job id: 6832429137
[2025-10-13 12:12:19] 2025-10-13 16:11:36,035 | INFO     | task id: 46376905
[2025-10-13 12:12:19] 2025-10-13 16:11:36,035 | INFO     | errors: (none)
[2025-10-13 12:12:19] 2025-10-13 16:11:36,035 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 12:12:19] 2025-10-13 16:11:36,035 | INFO     | pilot state: finished 
[2025-10-13 12:12:19] 2025-10-13 16:11:36,035 | INFO     | transexitcode: 0
[2025-10-13 12:12:19] 2025-10-13 16:11:36,035 | INFO     | exeerrorcode: 0
[2025-10-13 12:12:19] 2025-10-13 16:11:36,035 | INFO     | exeerrordiag: 
[2025-10-13 12:12:19] 2025-10-13 16:11:36,035 | INFO     | exitcode: 0
[2025-10-13 12:12:19] 2025-10-13 16:11:36,036 | INFO     | exitmsg: OK
[2025-10-13 12:12:19] 2025-10-13 16:11:36,036 | INFO     | cpuconsumptiontime: 28197 s
[2025-10-13 12:12:19] 2025-10-13 16:11:36,036 | INFO     | nevents: 400
[2025-10-13 12:12:19] 2025-10-13 16:11:36,036 | INFO     | neventsw: 0
[2025-10-13 12:12:19] 2025-10-13 16:11:36,036 | INFO     | pid: 2161866
[2025-10-13 12:12:19] 2025-10-13 16:11:36,036 | INFO     | pgrp: 2161866
[2025-10-13 12:12:19] 2025-10-13 16:11:36,036 | INFO     | corecount: 8
[2025-10-13 12:12:19] 2025-10-13 16:11:36,036 | INFO     | event service: False
[2025-10-13 12:12:19] 2025-10-13 16:11:36,036 | INFO     | sizes: {0: 2348816, 1: 2348816, 7: 2349106, 11: 2349134, 9797: 2377504, 9798: 2386686, 9804: 2386888}
[2025-10-13 12:12:19] 2025-10-13 16:11:36,036 | INFO     | --------------------------------------------------
[2025-10-13 12:12:19] 2025-10-13 16:11:36,036 | INFO     | 
[2025-10-13 12:12:19] 2025-10-13 16:11:36,036 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 12:12:19] 2025-10-13 16:11:36,060 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 12:12:19] 2025-10-13 16:11:36,061 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 12:12:19] 2025-10-13 16:11:36,061 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 12:12:19] 2025-10-13 16:11:36,061 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 12:12:19] 2025-10-13 16:11:36,061 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 12:12:19] 2025-10-13 16:11:36,061 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 12:12:19] 2025-10-13 16:11:36,061 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 12:12:19] 2025-10-13 16:11:36,061 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 12:12:19] 2025-10-13 16:11:36,062 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 12:12:19] 2025-10-13 16:11:36,062 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 12:12:19] 2025-10-13 16:11:36,062 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 12:12:19] 2025-10-13 16:11:36,062 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 12:12:19] 2025-10-13 16:11:36,062 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 12:12:19] 2025-10-13 16:11:36,062 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 12:12:19] 2025-10-13 16:11:36,062 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 12:12:19] 2025-10-13 16:11:36,062 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 12:12:19] 2025-10-13 16:11:36,062 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 12:12:19] 2025-10-13 16:11:36,063 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 12:12:19] 2025-10-13 16:11:36,063 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 12:12:19] 2025-10-13 16:11:36,063 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 12:12:19] 2025-10-13 16:11:36,063 | INFO     | job 6832429137 has completed (purged errors)
[2025-10-13 12:12:19] 2025-10-13 16:11:36,063 | INFO     | overall cleanup function is called
[2025-10-13 12:12:19] 2025-10-13 16:11:37,073 | INFO     | --- collectZombieJob: --- 10, [2161866]
[2025-10-13 12:12:19] 2025-10-13 16:11:37,073 | INFO     | zombie collector waiting for pid 2161866
[2025-10-13 12:12:19] 2025-10-13 16:11:37,073 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 12:12:19] 2025-10-13 16:11:37,073 | INFO     | collected zombie processes
[2025-10-13 12:12:19] 2025-10-13 16:11:37,073 | INFO     | will attempt to kill all subprocesses of pid=2161866
[2025-10-13 12:12:19] 2025-10-13 16:11:37,536 | INFO     | process IDs to be killed: [2161866] (in reverse order)
[2025-10-13 12:12:19] 2025-10-13 16:11:37,712 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 12:12:19] 2025-10-13 16:11:37,712 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 12:12:19] 2025-10-13 16:11:37,732 | INFO     | did not find any defunct processes belonging to 2161866
[2025-10-13 12:12:19] 2025-10-13 16:11:37,754 | INFO     | did not find any defunct processes belonging to 2161866
[2025-10-13 12:12:19] 2025-10-13 16:11:37,754 | INFO     | ready for new job
[2025-10-13 12:12:19] 2025-10-13 16:11:37,754 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 12:12:19] 2025-10-13 16:11:37,756 | INFO     | ***************************************
[2025-10-13 12:12:19] 2025-10-13 16:11:37,756 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 12:12:19] 2025-10-13 16:11:37,756 | INFO     | ***************************************
[2025-10-13 12:12:19] 2025-10-13 16:11:37,756 | INFO     | 
[2025-10-13 12:12:19] 2025-10-13 16:11:37,775 | INFO     | architecture information:
[2025-10-13 12:12:19] 2025-10-13 16:11:37,775 | INFO     | executing command: cat /etc/os-release
[2025-10-13 12:12:19] 2025-10-13 16:11:37,796 | INFO     | cat /etc/os-release:
[2025-10-13 12:12:19] NAME="CentOS Linux"
[2025-10-13 12:12:19] VERSION="7 (Core)"
[2025-10-13 12:12:19] ID="centos"
[2025-10-13 12:12:19] ID_LIKE="rhel fedora"
[2025-10-13 12:12:19] VERSION_ID="7"
[2025-10-13 12:12:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:12:19] ANSI_COLOR="0;31"
[2025-10-13 12:12:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:12:19] HOME_URL="https://www.centos.org/"
[2025-10-13 12:12:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:12:19] 
[2025-10-13 12:12:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:12:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:12:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:12:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:12:19] 
[2025-10-13 12:12:19] 2025-10-13 16:11:37,796 | INFO     | ***************************************
[2025-10-13 12:12:19] 2025-10-13 16:11:38,299 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 12:12:19] 2025-10-13 16:11:38,319 | INFO     | sufficient remaining disk space (95467601920 B)
[2025-10-13 12:12:19] 2025-10-13 16:11:38,319 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:12:19] 2025-10-13 16:11:38,319 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:12:19] 2025-10-13 16:11:38,319 | INFO     | update_server=False
[2025-10-13 12:12:19] 2025-10-13 16:11:38,320 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:12:19] 2025-10-13 16:11:38,320 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:12:19] 2025-10-13 16:11:38,342 | INFO     | all job control threads have been joined
[2025-10-13 12:12:19] 2025-10-13 16:11:38,403 | INFO     | all payload control threads have been joined
[2025-10-13 12:12:19] 2025-10-13 16:11:38,816 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:12:19] 2025-10-13 16:11:38,817 | INFO     | aborting loop
[2025-10-13 12:12:19] 2025-10-13 16:11:39,324 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:12:19] 2025-10-13 16:11:39,347 | INFO     | [job] control thread has finished
[2025-10-13 12:12:19] 2025-10-13 16:11:39,357 | INFO     | all data control threads have been joined
[2025-10-13 12:12:19] 2025-10-13 16:11:39,408 | INFO     | [payload] control thread has finished
[2025-10-13 12:12:19] 2025-10-13 16:11:39,490 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:12:19] 2025-10-13 16:11:39,764 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:12:19] 2025-10-13 16:11:39,822 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:12:19] 2025-10-13 16:11:39,899 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:12:19] 2025-10-13 16:11:40,195 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:12:19] 2025-10-13 16:11:40,310 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:12:19] 2025-10-13 16:11:40,325 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:12:19] 2025-10-13 16:11:40,362 | INFO     | [data] control thread has finished
[2025-10-13 12:12:19] 2025-10-13 16:11:40,440 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:12:19] 2025-10-13 16:11:40,524 | INFO     | [job] validate thread has finished
[2025-10-13 12:12:19] 2025-10-13 16:11:40,766 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:12:19] 2025-10-13 16:11:41,046 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:12:19] 2025-10-13 16:11:42,051 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:12:19] 2025-10-13 16:11:44,449 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:12:19] 2025-10-13 16:11:48,437 | INFO     | job.realtimelogging is not enabled
[2025-10-13 12:12:19] 2025-10-13 16:11:49,442 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:12:19] 2025-10-13 16:12:08,752 | INFO     | PID=2141526 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 12:12:19] 2025-10-13 16:12:08,752 | INFO     | .. there are 38 such processes running
[2025-10-13 12:12:19] 2025-10-13 16:12:08,752 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:12:19] 2025-10-13 16:12:08,753 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:12:19] 2025-10-13 16:12:08,753 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:12:19] 2025-10-13 16:12:11,686 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:12:19] 2025-10-13 16:12:13,597 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140355163948864)>', '<ExcThread(monitor, started 140354657429248)>']
[2025-10-13 12:12:19] 2025-10-13 16:12:13,776 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:12:19] 2025-10-13 16:12:13,776 | INFO     | [monitor] control thread has ended
[2025-10-13 12:12:19] 2025-10-13 16:12:18,622 | INFO     | all workflow threads have been joined
[2025-10-13 12:12:19] 2025-10-13 16:12:18,622 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:12:19] 2025-10-13 16:12:18,623 | INFO     | traces error code: 0
[2025-10-13 12:12:19] 2025-10-13 16:12:18,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:12:19] 2025-10-13 16:12:18,801 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:12:19] 2025-10-13 16:12:18,803 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:12:19] 2025-10-13 16:12:18,805 [wrapper] pilotpid: 2141526
[2025-10-13 12:12:19] 2025-10-13 16:12:18,807 [wrapper] Pilot exit status: 0
[2025-10-13 12:12:19] 2025-10-13 16:12:18,820 [wrapper] pandaids: 6832429137
[2025-10-13 12:12:19] 2025-10-13 16:12:18,935 [wrapper] cleanup supervisor_pilot 2878178 2141527
[2025-10-13 12:12:19] 2025-10-13 16:12:18,939 [wrapper] Test setup, not cleaning
[2025-10-13 12:12:19] 2025-10-13 16:12:18,949 [wrapper] apfmon messages muted
[2025-10-13 12:12:19] 2025-10-13 16:12:18,952 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:12:19] 2025-10-13 16:12:18,955 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:12:19]  *** Error codes and diagnostics ***
[2025-10-13 12:12:19]     "exeErrorCode": 0,
[2025-10-13 12:12:19]     "exeErrorDiag": "",
[2025-10-13 12:12:19]     "pilotErrorCode": 0,
[2025-10-13 12:12:19]     "pilotErrorDiag": "",
[2025-10-13 12:12:19]  *** Listing of results directory ***
[2025-10-13 12:12:19] total 389196
[2025-10-13 12:12:19] -rw-r--r--. 1 boincer umatlas    552446 Oct  6 04:08 pilot3.tar.gz
[2025-10-13 12:12:19] -rw-r--r--. 1 boincer umatlas      5112 Oct  6 04:24 queuedata.json
[2025-10-13 12:12:19] -rwx------. 1 boincer umatlas     36292 Oct  6 04:25 runpilot2-wrapper.sh
[2025-10-13 12:12:19] -rw-r--r--. 1 boincer umatlas       100 Oct 13 09:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:12:19] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 09:27 run_atlas
[2025-10-13 12:12:19] -rw-r--r--. 1 boincer umatlas       105 Oct 13 09:27 job.xml
[2025-10-13 12:12:19] -rw-r--r--. 2 boincer umatlas 212078455 Oct 13 09:27 EVNT.46376901._004012.pool.root.1
[2025-10-13 12:12:19] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 09:27 start_atlas.sh
[2025-10-13 12:12:19] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 09:27 shared
[2025-10-13 12:12:19] -rw-r--r--. 2 boincer umatlas    565601 Oct 13 09:27 input.tar.gz
[2025-10-13 12:12:19] -rw-r--r--. 1 boincer umatlas         0 Oct 13 09:27 boinc_lockfile
[2025-10-13 12:12:19] -rw-r--r--. 1 boincer umatlas      2519 Oct 13 09:27 pandaJob.out
[2025-10-13 12:12:19] -rw-------. 1 boincer umatlas    979287 Oct 13 09:27 agis_schedconf.cvmfs.json
[2025-10-13 12:12:19] -rw-------. 1 boincer umatlas   1560580 Oct 13 09:27 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:12:19] drwx------. 4 boincer umatlas      4096 Oct 13 09:27 pilot3
[2025-10-13 12:12:19] -rw-r--r--. 1 boincer umatlas      6936 Oct 13 12:02 init_data.xml
[2025-10-13 12:12:19] -rw-r--r--. 1 boincer umatlas       529 Oct 13 12:11 boinc_task_state.xml
[2025-10-13 12:12:19] -rw-------. 1 boincer umatlas 179290669 Oct 13 12:11 HITS.46376905._108178.pool.root.1
[2025-10-13 12:12:19] -rw-------. 1 boincer umatlas      1040 Oct 13 12:11 memory_monitor_summary.json
[2025-10-13 12:12:19] -rw-------. 1 boincer umatlas        95 Oct 13 12:11 pilot_heartbeat.json
[2025-10-13 12:12:19] -rw-------. 1 boincer umatlas    383778 Oct 13 12:11 log.46376905._108178.job.log.tgz.1
[2025-10-13 12:12:19] -rw-------. 1 boincer umatlas      7779 Oct 13 12:11 heartbeat.json
[2025-10-13 12:12:19] -rw-r--r--. 1 boincer umatlas        27 Oct 13 12:12 wrapper_checkpoint.txt
[2025-10-13 12:12:19] -rw-------. 1 boincer umatlas      4896 Oct 13 12:12 pilotlog.txt
[2025-10-13 12:12:19] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 12:12 boinc_mmap_file
[2025-10-13 12:12:19] -rw-------. 1 boincer umatlas   1251818 Oct 13 12:12 log.46376905._108178.job.log.1
[2025-10-13 12:12:19] -rw-------. 1 boincer umatlas       357 Oct 13 12:12 output.list
[2025-10-13 12:12:19] -rw-r--r--. 1 boincer umatlas       620 Oct 13 12:12 runtime_log
[2025-10-13 12:12:19] -rw-------. 1 boincer umatlas   1658880 Oct 13 12:12 result.tar.gz
[2025-10-13 12:12:19] -rw-------. 1 boincer umatlas       653 Oct 13 12:12 sTQNDmVivP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnzSNDmfsktRo.diag
[2025-10-13 12:12:19] -rw-r--r--. 1 boincer umatlas      8698 Oct 13 12:12 runtime_log.err
[2025-10-13 12:12:19] -rw-r--r--. 1 boincer umatlas     20889 Oct 13 12:12 stderr.txt
[2025-10-13 12:12:19] HITS file was successfully produced:
[2025-10-13 12:12:19] -rw-------. 1 boincer umatlas 179290669 Oct 13 12:11 shared/HITS.pool.root.1
[2025-10-13 12:12:19]  *** Contents of shared directory: ***
[2025-10-13 12:12:19] total 384396
[2025-10-13 12:12:19] -rw-r--r--. 2 boincer umatlas 212078455 Oct 13 09:27 ATLAS.root_0
[2025-10-13 12:12:19] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 09:27 start_atlas.sh
[2025-10-13 12:12:19] -rw-r--r--. 2 boincer umatlas    565601 Oct 13 09:27 input.tar.gz
[2025-10-13 12:12:19] -rw-------. 1 boincer umatlas 179290669 Oct 13 12:11 HITS.pool.root.1
[2025-10-13 12:12:19] -rw-------. 1 boincer umatlas   1658880 Oct 13 12:12 result.tar.gz
12:12:20 (2131117): run_atlas exited; CPU time 28591.968067
12:12:20 (2131117): called boinc_finish(0)

</stderr_txt>
]]>

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