Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:22:18 (632863): wrapper (7.7.26015): starting
09:22:18 (632863): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 09:22:18] Arguments: --nthreads 8
[2025-10-13 09:22:18] Threads: 8
[2025-10-13 09:22:18] Checking for CVMFS
[2025-10-13 09:22:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:22:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:22:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:22:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:22:20] 2.13.2.0 2849342 130735 515116 151662 2 32 21394155 32935936 25834 16776704 0 269761607 99.644 247325268 20821 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 09:22:20] CVMFS is ok
[2025-10-13 09:22:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:22:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:22:20] Further information can be found at the LHC@home message board.
[2025-10-13 09:22:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:22:20] Checking for apptainer binary...
[2025-10-13 09:22:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:22:20] Running /usr/bin/apptainer --version
[2025-10-13 09:22:20] apptainer version 1.4.3-1.el9
[2025-10-13 09:22:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:22:21] c6-8-25-4.aglt2.org
[2025-10-13 09:22:21] apptainer works
[2025-10-13 09:22:21] Set ATHENA_PROC_NUMBER=8
[2025-10-13 09:22:21] Set ATHENA_CORE_NUMBER=8
[2025-10-13 09:22:21] Starting ATLAS job with PandaID=6842960654
[2025-10-13 09:22:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:40:35]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:40:35] 2025-10-13 15:39:39,681 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:40:35] 2025-10-13 15:39:40,193 | INFO     | time since job start (8186s) is within the limit (172800.0s)
[2025-10-13 11:40:35] 2025-10-13 15:39:40,636 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 11:40:35] 2025-10-13 15:39:40,648 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2698.1515000000004
[2025-10-13 11:40:35] 2025-10-13 15:39:40,663 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6842960654/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 11:40:35] 2025-10-13 15:39:40,664 | INFO     | extracted standard info from prmon json
[2025-10-13 11:40:35] 2025-10-13 15:39:40,664 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 11:40:35] 2025-10-13 15:39:40,664 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 11:40:35] 2025-10-13 15:39:40,664 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:40:35] 2025-10-13 15:39:40,664 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:40:35] 2025-10-13 15:39:40,666 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:40:35] 2025-10-13 15:39:40,667 | INFO     | sum of square deviations: 729424598.2857155
[2025-10-13 11:40:35] 2025-10-13 15:39:40,667 | INFO     | sum of deviations: -10583106419.28571
[2025-10-13 11:40:35] 2025-10-13 15:39:40,667 | INFO     | mean x: 1760365907.142857
[2025-10-13 11:40:35] 2025-10-13 15:39:40,668 | INFO     | mean y: 2220159.8045112784
[2025-10-13 11:40:35] 2025-10-13 15:39:40,668 | INFO     | -- intersect: 25543091383.45066
[2025-10-13 11:40:35] 2025-10-13 15:39:40,668 | INFO     | intersect: 25543091383.45066
[2025-10-13 11:40:35] 2025-10-13 15:39:40,668 | INFO     | chi2: 2.097296411695807
[2025-10-13 11:40:35] 2025-10-13 15:39:40,668 | INFO     | sum of square deviations: 650210303.1796875
[2025-10-13 11:40:35] 2025-10-13 15:39:40,669 | INFO     | sum of deviations: -8297598659.9921875
[2025-10-13 11:40:35] 2025-10-13 15:39:40,669 | INFO     | mean x: 1760365754.6484375
[2025-10-13 11:40:35] 2025-10-13 15:39:40,669 | INFO     | mean y: 2224520.2890625
[2025-10-13 11:40:35] 2025-10-13 15:39:40,669 | INFO     | -- intersect: 22466969319.68111
[2025-10-13 11:40:35] 2025-10-13 15:39:40,669 | INFO     | intersect: 22466969319.68111
[2025-10-13 11:40:35] 2025-10-13 15:39:40,669 | INFO     | chi2: 2.0926990167070287
[2025-10-13 11:40:35] 2025-10-13 15:39:40,669 | INFO     | current chi2=2.0926990167070287 (change=0.21920578145941638 %)
[2025-10-13 11:40:35] 2025-10-13 15:39:40,670 | INFO     | right removable region: 127
[2025-10-13 11:40:35] 2025-10-13 15:39:40,670 | INFO     | sum of square deviations: 650206703.46875
[2025-10-13 11:40:35] 2025-10-13 15:39:40,670 | INFO     | sum of deviations: -31581432720.734375
[2025-10-13 11:40:35] 2025-10-13 15:39:40,670 | INFO     | mean x: 1760366059.640625
[2025-10-13 11:40:35] 2025-10-13 15:39:40,670 | INFO     | mean y: 2260116.1796875
[2025-10-13 11:40:35] 2025-10-13 15:39:40,671 | INFO     | -- intersect: 85505657697.00247
[2025-10-13 11:40:35] 2025-10-13 15:39:40,671 | INFO     | intersect: 85505657697.00247
[2025-10-13 11:40:35] 2025-10-13 15:39:40,671 | INFO     | chi2: 0.3535467702533734
[2025-10-13 11:40:35] 2025-10-13 15:39:40,671 | INFO     | current chi2=0.3535467702533734 (change=83.14273708371499 %)
[2025-10-13 11:40:35] 2025-10-13 15:39:40,671 | INFO     | sum of square deviations: 576949971.918698
[2025-10-13 11:40:35] 2025-10-13 15:39:40,672 | INFO     | sum of deviations: -29602941560.918697
[2025-10-13 11:40:35] 2025-10-13 15:39:40,672 | INFO     | mean x: 1760366212.1300814
[2025-10-13 11:40:35] 2025-10-13 15:39:40,672 | INFO     | mean y: 2255872.8699186994
[2025-10-13 11:40:35] 2025-10-13 15:39:40,672 | INFO     | -- intersect: 90325543228.61673
[2025-10-13 11:40:35] 2025-10-13 15:39:40,672 | INFO     | intersect: 90325543228.61673
[2025-10-13 11:40:35] 2025-10-13 15:39:40,672 | INFO     | chi2: 0.3279779154494827
[2025-10-13 11:40:35] 2025-10-13 15:39:40,672 | INFO     | current chi2=0.3279779154494827 (change=7.232099669745671 %)
[2025-10-13 11:40:35] 2025-10-13 15:39:40,673 | INFO     | left removable region: 20
[2025-10-13 11:40:35] 2025-10-13 15:39:40,673 | INFO     | sum of square deviations: 379807120.1682245
[2025-10-13 11:40:35] 2025-10-13 15:39:40,673 | INFO     | sum of deviations: -16713168287.915886
[2025-10-13 11:40:35] 2025-10-13 15:39:40,673 | INFO     | mean x: 1760366334.130841
[2025-10-13 11:40:35] 2025-10-13 15:39:40,673 | INFO     | mean y: 2237203.0654205605
[2025-10-13 11:40:35] 2025-10-13 15:39:40,673 | INFO     | -- intersect: 77466026659.35313
[2025-10-13 11:40:35] 2025-10-13 15:39:40,674 | INFO     | intersect: 77466026659.35313
[2025-10-13 11:40:35] 2025-10-13 15:39:40,674 | INFO     | chi2: 0.29062332097378446
[2025-10-13 11:40:35] 2025-10-13 15:39:40,674 | INFO     | -- intersect: 77466026659.35313
[2025-10-13 11:40:35] 2025-10-13 15:39:40,674 | INFO     | current memory leak: -44.00 B/s (using 107 data points, chi2=0.29)
[2025-10-13 11:40:35] 2025-10-13 15:39:40,674 | INFO     | could have reported an average CPU frequency of 2577 MHz (8 samples)
[2025-10-13 11:40:35] 2025-10-13 15:39:40,675 | INFO     | ..............................
[2025-10-13 11:40:35] 2025-10-13 15:39:40,675 | INFO     | . Timing measurements:
[2025-10-13 11:40:35] 2025-10-13 15:39:40,675 | INFO     | . get job = 0 s
[2025-10-13 11:40:35] 2025-10-13 15:39:40,675 | INFO     | . initial setup = 4 s
[2025-10-13 11:40:35] 2025-10-13 15:39:40,675 | INFO     | . payload setup = 23 s
[2025-10-13 11:40:35] 2025-10-13 15:39:40,675 | INFO     | . stage-in = 0 s
[2025-10-13 11:40:35] 2025-10-13 15:39:40,675 | INFO     | . payload execution = 8108 s
[2025-10-13 11:40:35] 2025-10-13 15:39:40,675 | INFO     | . stage-out = 1 s
[2025-10-13 11:40:35] 2025-10-13 15:39:40,675 | INFO     | . log creation = 0 s
[2025-10-13 11:40:35] 2025-10-13 15:39:40,675 | INFO     | ..............................
[2025-10-13 11:40:35] 2025-10-13 15:39:41,135 | INFO     | 
[2025-10-13 11:40:35] 2025-10-13 15:39:41,136 | INFO     | job summary report
[2025-10-13 11:40:35] 2025-10-13 15:39:41,136 | INFO     | --------------------------------------------------
[2025-10-13 11:40:35] 2025-10-13 15:39:41,136 | INFO     | PanDA job id: 6842960654
[2025-10-13 11:40:35] 2025-10-13 15:39:41,136 | INFO     | task id: 46676269
[2025-10-13 11:40:35] 2025-10-13 15:39:41,136 | INFO     | errors: (none)
[2025-10-13 11:40:35] 2025-10-13 15:39:41,136 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:40:35] 2025-10-13 15:39:41,136 | INFO     | pilot state: finished 
[2025-10-13 11:40:35] 2025-10-13 15:39:41,136 | INFO     | transexitcode: 0
[2025-10-13 11:40:35] 2025-10-13 15:39:41,136 | INFO     | exeerrorcode: 0
[2025-10-13 11:40:35] 2025-10-13 15:39:41,136 | INFO     | exeerrordiag: 
[2025-10-13 11:40:35] 2025-10-13 15:39:41,137 | INFO     | exitcode: 0
[2025-10-13 11:40:35] 2025-10-13 15:39:41,137 | INFO     | exitmsg: OK
[2025-10-13 11:40:35] 2025-10-13 15:39:41,137 | INFO     | cpuconsumptiontime: 44283 s
[2025-10-13 11:40:35] 2025-10-13 15:39:41,137 | INFO     | nevents: 400
[2025-10-13 11:40:35] 2025-10-13 15:39:41,137 | INFO     | neventsw: 0
[2025-10-13 11:40:35] 2025-10-13 15:39:41,137 | INFO     | pid: 647022
[2025-10-13 11:40:35] 2025-10-13 15:39:41,137 | INFO     | pgrp: 647022
[2025-10-13 11:40:35] 2025-10-13 15:39:41,137 | INFO     | corecount: 8
[2025-10-13 11:40:35] 2025-10-13 15:39:41,137 | INFO     | event service: False
[2025-10-13 11:40:35] 2025-10-13 15:39:41,137 | INFO     | sizes: {0: 2348633, 1: 2348832, 12: 2348832, 22: 2349122, 23: 2349150, 8135: 2376985, 8136: 2385983, 8138: 2386039, 8142: 2386233}
[2025-10-13 11:40:35] 2025-10-13 15:39:41,137 | INFO     | --------------------------------------------------
[2025-10-13 11:40:35] 2025-10-13 15:39:41,137 | INFO     | 
[2025-10-13 11:40:35] 2025-10-13 15:39:41,138 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 11:40:35] 2025-10-13 15:39:41,167 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:40:35] 2025-10-13 15:39:41,168 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:40:35] 2025-10-13 15:39:41,168 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:40:35] 2025-10-13 15:39:41,168 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:40:35] 2025-10-13 15:39:41,168 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:40:35] 2025-10-13 15:39:41,168 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:40:35] 2025-10-13 15:39:41,168 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:40:35] 2025-10-13 15:39:41,168 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:40:35] 2025-10-13 15:39:41,168 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:40:35] 2025-10-13 15:39:41,168 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:40:35] 2025-10-13 15:39:41,168 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:40:35] 2025-10-13 15:39:41,168 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:40:35] 2025-10-13 15:39:41,169 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:40:35] 2025-10-13 15:39:41,169 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:40:35] 2025-10-13 15:39:41,169 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:40:35] 2025-10-13 15:39:41,169 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:40:35] 2025-10-13 15:39:41,169 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:40:35] 2025-10-13 15:39:41,169 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:40:35] 2025-10-13 15:39:41,169 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:40:35] 2025-10-13 15:39:41,169 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:40:35] 2025-10-13 15:39:41,169 | INFO     | job 6842960654 has completed (purged errors)
[2025-10-13 11:40:35] 2025-10-13 15:39:41,169 | INFO     | overall cleanup function is called
[2025-10-13 11:40:35] 2025-10-13 15:39:42,178 | INFO     | --- collectZombieJob: --- 10, [647022]
[2025-10-13 11:40:35] 2025-10-13 15:39:42,178 | INFO     | zombie collector waiting for pid 647022
[2025-10-13 11:40:35] 2025-10-13 15:39:42,178 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:40:35] 2025-10-13 15:39:42,178 | INFO     | collected zombie processes
[2025-10-13 11:40:35] 2025-10-13 15:39:42,179 | INFO     | will attempt to kill all subprocesses of pid=647022
[2025-10-13 11:40:35] 2025-10-13 15:39:42,556 | INFO     | process IDs to be killed: [647022] (in reverse order)
[2025-10-13 11:40:35] 2025-10-13 15:39:42,669 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:40:35] 2025-10-13 15:39:42,670 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:40:35] 2025-10-13 15:39:42,686 | INFO     | did not find any defunct processes belonging to 647022
[2025-10-13 11:40:35] 2025-10-13 15:39:42,702 | INFO     | did not find any defunct processes belonging to 647022
[2025-10-13 11:40:35] 2025-10-13 15:39:42,702 | INFO     | ready for new job
[2025-10-13 11:40:35] 2025-10-13 15:39:42,702 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:40:35] 2025-10-13 15:39:42,704 | INFO     | ***************************************
[2025-10-13 11:40:35] 2025-10-13 15:39:42,704 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:40:35] 2025-10-13 15:39:42,704 | INFO     | ***************************************
[2025-10-13 11:40:35] 2025-10-13 15:39:42,704 | INFO     | 
[2025-10-13 11:40:35] 2025-10-13 15:39:42,723 | INFO     | architecture information:
[2025-10-13 11:40:35] 2025-10-13 15:39:42,724 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:40:35] 2025-10-13 15:39:42,738 | INFO     | cat /etc/os-release:
[2025-10-13 11:40:35] NAME="CentOS Linux"
[2025-10-13 11:40:35] VERSION="7 (Core)"
[2025-10-13 11:40:35] ID="centos"
[2025-10-13 11:40:35] ID_LIKE="rhel fedora"
[2025-10-13 11:40:35] VERSION_ID="7"
[2025-10-13 11:40:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:40:35] ANSI_COLOR="0;31"
[2025-10-13 11:40:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:40:35] HOME_URL="https://www.centos.org/"
[2025-10-13 11:40:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:40:35] 
[2025-10-13 11:40:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:40:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:40:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:40:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:40:35] 
[2025-10-13 11:40:35] 2025-10-13 15:39:42,739 | INFO     | ***************************************
[2025-10-13 11:40:35] 2025-10-13 15:39:43,242 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 11:40:35] 2025-10-13 15:39:43,261 | INFO     | sufficient remaining disk space (76077334528 B)
[2025-10-13 11:40:35] 2025-10-13 15:39:43,261 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:40:35] 2025-10-13 15:39:43,261 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:40:35] 2025-10-13 15:39:43,261 | INFO     | update_server=False
[2025-10-13 11:40:35] 2025-10-13 15:39:43,261 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:40:35] 2025-10-13 15:39:43,262 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:40:35] 2025-10-13 15:39:43,262 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:40:35] 2025-10-13 15:39:43,262 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:40:35] 2025-10-13 15:39:43,262 | INFO     | aborting loop
[2025-10-13 11:40:35] 2025-10-13 15:39:43,881 | INFO     | all data control threads have been joined
[2025-10-13 11:40:35] 2025-10-13 15:39:44,267 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:40:35] 2025-10-13 15:39:44,268 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:40:35] 2025-10-13 15:39:44,281 | INFO     | all payload control threads have been joined
[2025-10-13 11:40:35] 2025-10-13 15:39:44,409 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:40:35] 2025-10-13 15:39:44,416 | INFO     | all job control threads have been joined
[2025-10-13 11:40:35] 2025-10-13 15:39:44,451 | INFO     | [job] validate thread has finished
[2025-10-13 11:40:35] 2025-10-13 15:39:44,454 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:40:35] 2025-10-13 15:39:44,566 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:40:35] 2025-10-13 15:39:44,812 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:40:35] 2025-10-13 15:39:44,887 | INFO     | [data] control thread has finished
[2025-10-13 11:40:35] 2025-10-13 15:39:45,042 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:40:35] 2025-10-13 15:39:45,268 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:40:35] 2025-10-13 15:39:45,286 | INFO     | [payload] control thread has finished
[2025-10-13 11:40:35] 2025-10-13 15:39:45,420 | INFO     | [job] control thread has finished
[2025-10-13 11:40:35] 2025-10-13 15:39:45,784 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:40:35] 2025-10-13 15:39:45,844 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:40:35] 2025-10-13 15:39:46,789 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:40:35] 2025-10-13 15:39:47,267 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:40:35] 2025-10-13 15:39:53,778 | INFO     | job.realtimelogging is not enabled
[2025-10-13 11:40:35] 2025-10-13 15:39:54,783 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:40:35] 2025-10-13 15:40:13,743 | INFO     | PID=637894 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 11:40:35] 2025-10-13 15:40:13,743 | INFO     | .. there are 30 such processes running
[2025-10-13 11:40:35] 2025-10-13 15:40:13,744 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:40:35] 2025-10-13 15:40:13,744 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:40:35] 2025-10-13 15:40:13,744 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:40:35] 2025-10-13 15:40:28,169 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:40:35] 2025-10-13 15:40:30,223 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139884380428096)>', '<ExcThread(monitor, started 139884014573312)>']
[2025-10-13 11:40:35] 2025-10-13 15:40:30,825 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:40:35] 2025-10-13 15:40:30,826 | INFO     | [monitor] control thread has ended
[2025-10-13 11:40:35] 2025-10-13 15:40:35,249 | INFO     | all workflow threads have been joined
[2025-10-13 11:40:35] 2025-10-13 15:40:35,250 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:40:35] 2025-10-13 15:40:35,250 | INFO     | traces error code: 0
[2025-10-13 11:40:35] 2025-10-13 15:40:35,250 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:40:35] 2025-10-13 15:40:35,406 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:40:35] 2025-10-13 15:40:35,409 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:40:35] 2025-10-13 15:40:35,411 [wrapper] pilotpid: 637894
[2025-10-13 11:40:35] 2025-10-13 15:40:35,413 [wrapper] Pilot exit status: 0
[2025-10-13 11:40:35] 2025-10-13 15:40:35,425 [wrapper] pandaids: 6842960654
[2025-10-13 11:40:35] 2025-10-13 15:40:35,499 [wrapper] cleanup supervisor_pilot 1120779 637895
[2025-10-13 11:40:35] 2025-10-13 15:40:35,502 [wrapper] Test setup, not cleaning
[2025-10-13 11:40:35] 2025-10-13 15:40:35,505 [wrapper] apfmon messages muted
[2025-10-13 11:40:35] 2025-10-13 15:40:35,508 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:40:35] 2025-10-13 15:40:35,510 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:40:35]  *** Error codes and diagnostics ***
[2025-10-13 11:40:35]     "exeErrorCode": 0,
[2025-10-13 11:40:35]     "exeErrorDiag": "",
[2025-10-13 11:40:35]     "pilotErrorCode": 0,
[2025-10-13 11:40:35]     "pilotErrorDiag": "",
[2025-10-13 11:40:35]  *** Listing of results directory ***
[2025-10-13 11:40:35] total 408924
[2025-10-13 11:40:35] -rw-r--r--. 1 boincer umatlas    557409 Oct 13 09:04 pilot3.tar.gz
[2025-10-13 11:40:35] -rwx------. 1 boincer umatlas     36292 Oct 13 09:21 runpilot2-wrapper.sh
[2025-10-13 11:40:35] -rw-r--r--. 1 boincer umatlas      5112 Oct 13 09:21 queuedata.json
[2025-10-13 11:40:35] -rw-r--r--. 1 boincer umatlas       100 Oct 13 09:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:40:35] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 09:22 run_atlas
[2025-10-13 11:40:35] -rw-r--r--. 1 boincer umatlas       105 Oct 13 09:22 job.xml
[2025-10-13 11:40:35] -rw-r--r--. 2 boincer umatlas 220187401 Oct 13 09:22 EVNT.46676267._001964.pool.root.1
[2025-10-13 11:40:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 09:22 start_atlas.sh
[2025-10-13 11:40:35] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 09:22 shared
[2025-10-13 11:40:35] -rw-r--r--. 2 boincer umatlas    569676 Oct 13 09:22 input.tar.gz
[2025-10-13 11:40:35] -rw-r--r--. 1 boincer umatlas         0 Oct 13 09:22 boinc_lockfile
[2025-10-13 11:40:35] -rw-r--r--. 1 boincer umatlas      2548 Oct 13 09:22 pandaJob.out
[2025-10-13 11:40:35] -rw-------. 1 boincer umatlas    972489 Oct 13 09:23 agis_schedconf.cvmfs.json
[2025-10-13 11:40:35] -rw-------. 1 boincer umatlas   1560580 Oct 13 09:23 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:40:35] drwx------. 5 boincer umatlas      4096 Oct 13 09:23 pilot3
[2025-10-13 11:40:35] -rw-r--r--. 1 boincer umatlas      6857 Oct 13 11:38 init_data.xml
[2025-10-13 11:40:35] -rw-------. 1 boincer umatlas 191807255 Oct 13 11:38 HITS.46676269._096812.pool.root.1
[2025-10-13 11:40:35] -rw-r--r--. 1 boincer umatlas       530 Oct 13 11:39 boinc_task_state.xml
[2025-10-13 11:40:35] -rw-------. 1 boincer umatlas      1039 Oct 13 11:39 memory_monitor_summary.json
[2025-10-13 11:40:35] -rw-------. 1 boincer umatlas    360429 Oct 13 11:39 log.46676269._096812.job.log.tgz.1
[2025-10-13 11:40:35] -rw-------. 1 boincer umatlas      7826 Oct 13 11:39 heartbeat.json
[2025-10-13 11:40:35] -rw-r--r--. 1 boincer umatlas        27 Oct 13 11:40 wrapper_checkpoint.txt
[2025-10-13 11:40:35] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 11:40 boinc_mmap_file
[2025-10-13 11:40:35] -rw-------. 1 boincer umatlas        95 Oct 13 11:40 pilot_heartbeat.json
[2025-10-13 11:40:35] -rw-------. 1 boincer umatlas      4895 Oct 13 11:40 pilotlog.txt
[2025-10-13 11:40:35] -rw-------. 1 boincer umatlas   1063774 Oct 13 11:40 log.46676269._096812.job.log.1
[2025-10-13 11:40:35] -rw-------. 1 boincer umatlas       357 Oct 13 11:40 output.list
[2025-10-13 11:40:35] -rw-r--r--. 1 boincer umatlas       620 Oct 13 11:40 runtime_log
[2025-10-13 11:40:35] -rw-------. 1 boincer umatlas   1443840 Oct 13 11:40 result.tar.gz
[2025-10-13 11:40:35] -rw-------. 1 boincer umatlas       653 Oct 13 11:40 vuMMDm1fXS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmLkVMDmetBIcm.diag
[2025-10-13 11:40:35] -rw-r--r--. 1 boincer umatlas      8708 Oct 13 11:40 runtime_log.err
[2025-10-13 11:40:35] -rw-r--r--. 1 boincer umatlas     21172 Oct 13 11:40 stderr.txt
[2025-10-13 11:40:35] HITS file was successfully produced:
[2025-10-13 11:40:35] -rw-------. 1 boincer umatlas 191807255 Oct 13 11:38 shared/HITS.pool.root.1
[2025-10-13 11:40:35]  *** Contents of shared directory: ***
[2025-10-13 11:40:35] total 404332
[2025-10-13 11:40:35] -rw-r--r--. 2 boincer umatlas 220187401 Oct 13 09:22 ATLAS.root_0
[2025-10-13 11:40:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 09:22 start_atlas.sh
[2025-10-13 11:40:35] -rw-r--r--. 2 boincer umatlas    569676 Oct 13 09:22 input.tar.gz
[2025-10-13 11:40:35] -rw-------. 1 boincer umatlas 191807255 Oct 13 11:38 HITS.pool.root.1
[2025-10-13 11:40:35] -rw-------. 1 boincer umatlas   1443840 Oct 13 11:40 result.tar.gz
11:40:36 (632863): run_atlas exited; CPU time 44630.172658
11:40:36 (632863): called boinc_finish(0)

</stderr_txt>
]]>

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