Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:14:27 (1281318): wrapper (7.7.26015): starting
09:14:27 (1281318): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 09:14:27] Arguments: --nthreads 8
[2025-10-13 09:14:27] Threads: 8
[2025-10-13 09:14:27] Checking for CVMFS
[2025-10-13 09:14:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:14:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:14:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:14:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:14:29] 2.13.2.0 79137 136389 570856 151662 3 15 39234141 40960001 39369 16776704 0 478756136 99.818 226434503 32267 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 09:14:29] CVMFS is ok
[2025-10-13 09:14:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:14:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:14:29] Further information can be found at the LHC@home message board.
[2025-10-13 09:14:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:14:29] Checking for apptainer binary...
[2025-10-13 09:14:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:14:29] Running /usr/bin/apptainer --version
[2025-10-13 09:14:29] apptainer version 1.4.3-1.el9
[2025-10-13 09:14:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:14:33] c8-7-6.aglt2.org
[2025-10-13 09:14:33] apptainer works
[2025-10-13 09:14:33] Set ATHENA_PROC_NUMBER=8
[2025-10-13 09:14:33] Set ATHENA_CORE_NUMBER=8
[2025-10-13 09:14:33] Starting ATLAS job with PandaID=6832323124
[2025-10-13 09:14:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:06:36]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:06:36] ]
[2025-10-13 10:06:36] 2025-10-13 14:05:37,659 | INFO     | transferring file log.46376905._104800.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6832323124/log.46376905._104800.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 10:06:36] 2025-10-13 14:05:37,659 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6832323124/log.46376905._104800.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._104800.job
[2025-10-13 10:06:36] 2025-10-13 14:05:37,703 | INFO     | adding to output.list: log.46376905._104800.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bc/5a/log.46376905._104800.job.log.tg
[2025-10-13 10:06:36] 2025-10-13 14:05:37,704 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 10:06:36] 2025-10-13 14:05:37,704 | INFO     | summary of transferred files:
[2025-10-13 10:06:36] 2025-10-13 14:05:37,704 | INFO     |  -- lfn=log.46376905._104800.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 10:06:36] 2025-10-13 14:05:37,704 | INFO     | stage-out finished correctly
[2025-10-13 10:06:36] 2025-10-13 14:05:38,491 | WARNING  | process 1312573 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 10:06:36] 2025-10-13 14:05:38,491 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6832323124/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 10:06:36] 2025-10-13 14:05:38,877 | INFO     | number of running child processes to parent process 1312573: 1
[2025-10-13 10:06:36] 2025-10-13 14:05:38,877 | INFO     | maximum number of monitored processes: 6
[2025-10-13 10:06:36] 2025-10-13 14:05:39,089 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 10:06:36] 2025-10-13 14:05:39,116 | INFO     | time since job start (3046s) is within the limit (172800.0s)
[2025-10-13 10:06:36] 2025-10-13 14:05:39,752 | INFO     | job 6832323124 has state=finished
[2025-10-13 10:06:36] 2025-10-13 14:05:39,752 | INFO     | preparing for final server update for job 6832323124 in state='finished'
[2025-10-13 10:06:36] 2025-10-13 14:05:39,753 | INFO     | this job has now completed (state=finished)
[2025-10-13 10:06:36] 2025-10-13 14:05:39,753 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 10:06:36] 2025-10-13 14:05:39,753 | INFO     | log transfer has been attempted: DONE
[2025-10-13 10:06:36] 2025-10-13 14:05:39,753 | INFO     | job 6832323124 has finished - writing final server update
[2025-10-13 10:06:36] 2025-10-13 14:05:39,753 | INFO     | total number of processed events: 400 (read)
[2025-10-13 10:06:36] 2025-10-13 14:05:39,760 | INFO     | executing command: lscpu
[2025-10-13 10:06:36] 2025-10-13 14:05:39,840 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 10:06:36] 2025-10-13 14:05:41,128 | INFO     | time since job start (3048s) is within the limit (172800.0s)
[2025-10-13 10:06:36] 2025-10-13 14:05:41,383 | INFO     | monitor loop #216: job 0:6832323124 is in state 'finished'
[2025-10-13 10:06:36] 2025-10-13 14:05:41,383 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:06:36] 2025-10-13 14:05:43,142 | INFO     | time since job start (3050s) is within the limit (172800.0s)
[2025-10-13 10:06:36] 2025-10-13 14:05:43,888 | INFO     | monitor loop #217: job 0:6832323124 is in state 'finished'
[2025-10-13 10:06:36] 2025-10-13 14:05:43,888 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:06:36] 2025-10-13 14:05:45,149 | INFO     | time since job start (3052s) is within the limit (172800.0s)
[2025-10-13 10:06:36] 2025-10-13 14:05:46,393 | INFO     | monitor loop #218: job 0:6832323124 is in state 'finished'
[2025-10-13 10:06:36] 2025-10-13 14:05:46,393 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:06:36] 2025-10-13 14:05:47,158 | INFO     | time since job start (3054s) is within the limit (172800.0s)
[2025-10-13 10:06:36] 2025-10-13 14:05:48,798 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 10:06:36] 2025-10-13 14:05:48,803 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3781.204804687498
[2025-10-13 10:06:36] 2025-10-13 14:05:48,816 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6832323124/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 10:06:36] 2025-10-13 14:05:48,817 | INFO     | extracted standard info from prmon json
[2025-10-13 10:06:36] 2025-10-13 14:05:48,817 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 10:06:36] 2025-10-13 14:05:48,817 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 10:06:36] 2025-10-13 14:05:48,817 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 10:06:36] 2025-10-13 14:05:48,817 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:06:36] 2025-10-13 14:05:48,818 | INFO     | fitting pss+swap vs Time
[2025-10-13 10:06:36] 2025-10-13 14:05:48,818 | INFO     | sum of square deviations: 24640462.0
[2025-10-13 10:06:36] 2025-10-13 14:05:48,818 | INFO     | sum of deviations: 216544632.00000003
[2025-10-13 10:06:36] 2025-10-13 14:05:48,818 | INFO     | mean x: 1760362906.0
[2025-10-13 10:06:36] 2025-10-13 14:05:48,818 | INFO     | mean y: 2940263.11627907
[2025-10-13 10:06:36] 2025-10-13 14:05:48,818 | INFO     | -- intersect: -15467432722.025826
[2025-10-13 10:06:36] 2025-10-13 14:05:48,818 | INFO     | intersect: -15467432722.025826
[2025-10-13 10:06:36] 2025-10-13 14:05:48,818 | INFO     | chi2: 0.0002103385224969543
[2025-10-13 10:06:36] 2025-10-13 14:05:48,818 | INFO     | -- intersect: -15467432722.025826
[2025-10-13 10:06:36] 2025-10-13 14:05:48,818 | INFO     | current memory leak: 8.79 B/s (using 43 data points, chi2=0.00)
[2025-10-13 10:06:36] 2025-10-13 14:05:48,819 | INFO     | could have reported an average CPU frequency of 3771 MHz (5 samples)
[2025-10-13 10:06:36] 2025-10-13 14:05:48,819 | INFO     | ..............................
[2025-10-13 10:06:36] 2025-10-13 14:05:48,819 | INFO     | . Timing measurements:
[2025-10-13 10:06:36] 2025-10-13 14:05:48,819 | INFO     | . get job = 0 s
[2025-10-13 10:06:36] 2025-10-13 14:05:48,819 | INFO     | . initial setup = 2 s
[2025-10-13 10:06:36] 2025-10-13 14:05:48,819 | INFO     | . payload setup = 6 s
[2025-10-13 10:06:36] 2025-10-13 14:05:48,819 | INFO     | . stage-in = 0 s
[2025-10-13 10:06:36] 2025-10-13 14:05:48,819 | INFO     | . payload execution = 3016 s
[2025-10-13 10:06:36] 2025-10-13 14:05:48,819 | INFO     | . stage-out = 0 s
[2025-10-13 10:06:36] 2025-10-13 14:05:48,819 | INFO     | . log creation = 0 s
[2025-10-13 10:06:36] 2025-10-13 14:05:48,819 | INFO     | ..............................
[2025-10-13 10:06:36] 2025-10-13 14:05:48,873 | INFO     | 
[2025-10-13 10:06:36] 2025-10-13 14:05:48,873 | INFO     | job summary report
[2025-10-13 10:06:36] 2025-10-13 14:05:48,873 | INFO     | --------------------------------------------------
[2025-10-13 10:06:36] 2025-10-13 14:05:48,873 | INFO     | PanDA job id: 6832323124
[2025-10-13 10:06:36] 2025-10-13 14:05:48,873 | INFO     | task id: 46376905
[2025-10-13 10:06:36] 2025-10-13 14:05:48,873 | INFO     | errors: (none)
[2025-10-13 10:06:36] 2025-10-13 14:05:48,873 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:06:36] 2025-10-13 14:05:48,874 | INFO     | pilot state: finished 
[2025-10-13 10:06:36] 2025-10-13 14:05:48,874 | INFO     | transexitcode: 0
[2025-10-13 10:06:36] 2025-10-13 14:05:48,874 | INFO     | exeerrorcode: 0
[2025-10-13 10:06:36] 2025-10-13 14:05:48,874 | INFO     | exeerrordiag: 
[2025-10-13 10:06:36] 2025-10-13 14:05:48,874 | INFO     | exitcode: 0
[2025-10-13 10:06:36] 2025-10-13 14:05:48,874 | INFO     | exitmsg: OK
[2025-10-13 10:06:36] 2025-10-13 14:05:48,874 | INFO     | cpuconsumptiontime: 20890 s
[2025-10-13 10:06:36] 2025-10-13 14:05:48,874 | INFO     | nevents: 400
[2025-10-13 10:06:36] 2025-10-13 14:05:48,874 | INFO     | neventsw: 0
[2025-10-13 10:06:36] 2025-10-13 14:05:48,874 | INFO     | pid: 1312573
[2025-10-13 10:06:36] 2025-10-13 14:05:48,874 | INFO     | pgrp: 1312573
[2025-10-13 10:06:36] 2025-10-13 14:05:48,874 | INFO     | corecount: 8
[2025-10-13 10:06:36] 2025-10-13 14:05:48,874 | INFO     | event service: False
[2025-10-13 10:06:36] 2025-10-13 14:05:48,874 | INFO     | sizes: {0: 2347988, 1: 2348844, 6: 2349106, 11: 2349134, 3027: 2374566, 3029: 2383564, 3030: 2383748, 3040: 2383974}
[2025-10-13 10:06:36] 2025-10-13 14:05:48,874 | INFO     | --------------------------------------------------
[2025-10-13 10:06:36] 2025-10-13 14:05:48,874 | INFO     | 
[2025-10-13 10:06:36] 2025-10-13 14:05:48,874 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 10:06:36] 2025-10-13 14:05:48,894 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:06:36] 2025-10-13 14:05:48,894 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:06:36] 2025-10-13 14:05:48,894 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:06:36] 2025-10-13 14:05:48,894 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:06:36] 2025-10-13 14:05:48,894 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:06:36] 2025-10-13 14:05:48,894 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:06:36] 2025-10-13 14:05:48,894 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:06:36] 2025-10-13 14:05:48,894 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:06:36] 2025-10-13 14:05:48,895 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:06:36] 2025-10-13 14:05:48,895 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:06:36] 2025-10-13 14:05:48,895 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:06:36] 2025-10-13 14:05:48,895 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:06:36] 2025-10-13 14:05:48,895 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:06:36] 2025-10-13 14:05:48,895 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:06:36] 2025-10-13 14:05:48,895 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:06:36] 2025-10-13 14:05:48,895 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:06:36] 2025-10-13 14:05:48,895 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:06:36] 2025-10-13 14:05:48,895 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:06:36] 2025-10-13 14:05:48,895 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:06:36] 2025-10-13 14:05:48,895 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:06:36] 2025-10-13 14:05:48,895 | INFO     | job 6832323124 has completed (purged errors)
[2025-10-13 10:06:36] 2025-10-13 14:05:48,895 | INFO     | overall cleanup function is called
[2025-10-13 10:06:36] 2025-10-13 14:05:49,902 | INFO     | --- collectZombieJob: --- 10, [1312573]
[2025-10-13 10:06:36] 2025-10-13 14:05:49,903 | INFO     | zombie collector waiting for pid 1312573
[2025-10-13 10:06:36] 2025-10-13 14:05:49,903 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:06:36] 2025-10-13 14:05:49,903 | INFO     | collected zombie processes
[2025-10-13 10:06:36] 2025-10-13 14:05:49,903 | INFO     | will attempt to kill all subprocesses of pid=1312573
[2025-10-13 10:06:36] 2025-10-13 14:05:50,325 | INFO     | process IDs to be killed: [1312573] (in reverse order)
[2025-10-13 10:06:36] 2025-10-13 14:05:50,566 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:06:36] 2025-10-13 14:05:50,567 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:06:36] 2025-10-13 14:05:50,591 | INFO     | did not find any defunct processes belonging to 1312573
[2025-10-13 10:06:36] 2025-10-13 14:05:50,615 | INFO     | did not find any defunct processes belonging to 1312573
[2025-10-13 10:06:36] 2025-10-13 14:05:50,616 | INFO     | ready for new job
[2025-10-13 10:06:36] 2025-10-13 14:05:50,616 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:06:36] 2025-10-13 14:05:50,617 | INFO     | ***************************************
[2025-10-13 10:06:36] 2025-10-13 14:05:50,617 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 10:06:36] 2025-10-13 14:05:50,617 | INFO     | ***************************************
[2025-10-13 10:06:36] 2025-10-13 14:05:50,617 | INFO     | 
[2025-10-13 10:06:36] 2025-10-13 14:05:50,633 | INFO     | architecture information:
[2025-10-13 10:06:36] 2025-10-13 14:05:50,637 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:06:36] 2025-10-13 14:05:50,667 | INFO     | cat /etc/os-release:
[2025-10-13 10:06:36] NAME="CentOS Linux"
[2025-10-13 10:06:36] VERSION="7 (Core)"
[2025-10-13 10:06:36] ID="centos"
[2025-10-13 10:06:36] ID_LIKE="rhel fedora"
[2025-10-13 10:06:36] VERSION_ID="7"
[2025-10-13 10:06:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:06:36] ANSI_COLOR="0;31"
[2025-10-13 10:06:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:06:36] HOME_URL="https://www.centos.org/"
[2025-10-13 10:06:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:06:36] 
[2025-10-13 10:06:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:06:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:06:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:06:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:06:36] 
[2025-10-13 10:06:36] 2025-10-13 14:05:50,670 | INFO     | ***************************************
[2025-10-13 10:06:36] 2025-10-13 14:05:51,172 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 10:06:36] 2025-10-13 14:05:51,191 | INFO     | sufficient remaining disk space (173258309632 B)
[2025-10-13 10:06:36] 2025-10-13 14:05:51,191 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:06:36] 2025-10-13 14:05:51,191 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:06:36] 2025-10-13 14:05:51,191 | INFO     | update_server=False
[2025-10-13 10:06:36] 2025-10-13 14:05:51,191 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:06:36] 2025-10-13 14:05:51,191 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:06:36] 2025-10-13 14:05:51,407 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 10:06:36] 2025-10-13 14:05:51,407 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 10:06:36] 2025-10-13 14:05:51,407 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:06:36] 2025-10-13 14:05:51,407 | INFO     | will abort loop
[2025-10-13 10:06:36] 2025-10-13 14:05:51,705 | INFO     | all data control threads have been joined
[2025-10-13 10:06:36] 2025-10-13 14:05:52,196 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:06:36] 2025-10-13 14:05:52,412 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:06:36] 2025-10-13 14:05:52,600 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:06:36] 2025-10-13 14:05:52,613 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:06:36] 2025-10-13 14:05:52,614 | INFO     | [job] validate thread has finished
[2025-10-13 10:06:36] 2025-10-13 14:05:52,661 | INFO     | all payload control threads have been joined
[2025-10-13 10:06:36] 2025-10-13 14:05:52,710 | INFO     | [data] control thread has finished
[2025-10-13 10:06:36] 2025-10-13 14:05:52,724 | INFO     | all job control threads have been joined
[2025-10-13 10:06:36] 2025-10-13 14:05:52,864 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:06:36] 2025-10-13 14:05:52,991 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:06:36] 2025-10-13 14:05:53,010 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:06:36] 2025-10-13 14:05:53,067 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:06:36] 2025-10-13 14:05:53,196 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:06:36] 2025-10-13 14:05:53,667 | INFO     | [payload] control thread has finished
[2025-10-13 10:06:36] 2025-10-13 14:05:53,729 | INFO     | [job] control thread has finished
[2025-10-13 10:06:36] 2025-10-13 14:05:53,886 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:06:36] 2025-10-13 14:05:54,158 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:06:36] 2025-10-13 14:05:54,891 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:06:36] 2025-10-13 14:05:57,768 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:06:36] 2025-10-13 14:05:58,166 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:06:36] 2025-10-13 14:06:01,291 | INFO     | job.realtimelogging is not enabled
[2025-10-13 10:06:36] 2025-10-13 14:06:02,296 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:06:36] 2025-10-13 14:06:02,739 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140183733921600)>', '<ExcThread(monitor, started 140183460615936)>']
[2025-10-13 10:06:36] 2025-10-13 14:06:07,768 | INFO     | all workflow threads have been joined
[2025-10-13 10:06:36] 2025-10-13 14:06:07,768 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:06:36] 2025-10-13 14:06:07,768 | INFO     | traces error code: 0
[2025-10-13 10:06:36] 2025-10-13 14:06:07,768 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:06:36] 2025-10-13 14:06:24,269 | INFO     | PID=1298597 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 10:06:36] 2025-10-13 14:06:24,372 | INFO     | .. there are 47 such processes running
[2025-10-13 10:06:36] 2025-10-13 14:06:24,372 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:06:36] 2025-10-13 14:06:24,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:06:36] 2025-10-13 14:06:24,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:06:36] 2025-10-13 14:06:24,372 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:06:36] 2025-10-13 14:06:24,372 | INFO     | [monitor] control thread has ended
[2025-10-13 10:06:36] 2025-10-13 14:06:33,014 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:06:36] 2025-10-13 14:06:33,018 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:06:36] 2025-10-13 14:06:33,020 [wrapper] pilotpid: 1298597
[2025-10-13 10:06:36] 2025-10-13 14:06:33,022 [wrapper] Pilot exit status: 0
[2025-10-13 10:06:36] 2025-10-13 14:06:33,122 [wrapper] pandaids: 6832323124
[2025-10-13 10:06:36] 2025-10-13 14:06:35,324 [wrapper] cleanup supervisor_pilot 1703360 1298598
[2025-10-13 10:06:36] 2025-10-13 14:06:35,331 [wrapper] Test setup, not cleaning
[2025-10-13 10:06:36] 2025-10-13 14:06:35,333 [wrapper] apfmon messages muted
[2025-10-13 10:06:36] 2025-10-13 14:06:35,334 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:06:36] 2025-10-13 14:06:35,336 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:06:36]  *** Error codes and diagnostics ***
[2025-10-13 10:06:36]     "exeErrorCode": 0,
[2025-10-13 10:06:36]     "exeErrorDiag": "",
[2025-10-13 10:06:36]     "pilotErrorCode": 0,
[2025-10-13 10:06:36]     "pilotErrorDiag": "",
[2025-10-13 10:06:36]  *** Listing of results directory ***
[2025-10-13 10:06:36] total 394228
[2025-10-13 10:06:36] -rw-r--r--. 1 boincer umatlas    552446 Oct  6 00:08 pilot3.tar.gz
[2025-10-13 10:06:36] -rwx------. 1 boincer umatlas     36292 Oct  6 00:10 runpilot2-wrapper.sh
[2025-10-13 10:06:36] -rw-r--r--. 1 boincer umatlas      5112 Oct  6 00:10 queuedata.json
[2025-10-13 10:06:36] -rw-r--r--. 1 boincer umatlas       100 Oct 13 09:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:06:36] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 09:14 run_atlas
[2025-10-13 10:06:36] -rw-r--r--. 1 boincer umatlas       105 Oct 13 09:14 job.xml
[2025-10-13 10:06:36] -rw-r--r--. 2 boincer umatlas 216977158 Oct 13 09:14 EVNT.46376901._003881.pool.root.1
[2025-10-13 10:06:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 09:14 start_atlas.sh
[2025-10-13 10:06:36] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 09:14 shared
[2025-10-13 10:06:36] -rw-r--r--. 2 boincer umatlas    565601 Oct 13 09:14 input.tar.gz
[2025-10-13 10:06:36] -rw-r--r--. 1 boincer umatlas         0 Oct 13 09:14 boinc_lockfile
[2025-10-13 10:06:36] -rw-r--r--. 1 boincer umatlas      2519 Oct 13 09:14 pandaJob.out
[2025-10-13 10:06:36] -rw-------. 1 boincer umatlas    972489 Oct 13 09:14 agis_schedconf.cvmfs.json
[2025-10-13 10:06:36] -rw-------. 1 boincer umatlas   1560580 Oct 13 09:14 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:06:36] drwx------. 4 boincer umatlas      4096 Oct 13 09:14 pilot3
[2025-10-13 10:06:36] -rw-r--r--. 1 boincer umatlas      7161 Oct 13 10:02 init_data.xml
[2025-10-13 10:06:36] -rw-------. 1 boincer umatlas 181327361 Oct 13 10:05 HITS.46376905._104800.pool.root.1
[2025-10-13 10:06:36] -rw-r--r--. 1 boincer umatlas       529 Oct 13 10:05 boinc_task_state.xml
[2025-10-13 10:06:36] -rw-------. 1 boincer umatlas      1053 Oct 13 10:05 memory_monitor_summary.json
[2025-10-13 10:06:36] -rw-------. 1 boincer umatlas    291455 Oct 13 10:05 log.46376905._104800.job.log.tgz.1
[2025-10-13 10:06:36] -rw-------. 1 boincer umatlas        95 Oct 13 10:05 pilot_heartbeat.json
[2025-10-13 10:06:36] -rw-------. 1 boincer umatlas      7783 Oct 13 10:05 heartbeat.json
[2025-10-13 10:06:36] -rw-------. 1 boincer umatlas       823 Oct 13 10:06 pilotlog.txt
[2025-10-13 10:06:36] -rw-------. 1 boincer umatlas    459699 Oct 13 10:06 log.46376905._104800.job.log.1
[2025-10-13 10:06:36] -rw-------. 1 boincer umatlas       357 Oct 13 10:06 output.list
[2025-10-13 10:06:36] -rw-r--r--. 1 boincer umatlas        27 Oct 13 10:06 wrapper_checkpoint.txt
[2025-10-13 10:06:36] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 10:06 boinc_mmap_file
[2025-10-13 10:06:36] -rw-r--r--. 1 boincer umatlas       620 Oct 13 10:06 runtime_log
[2025-10-13 10:06:36] -rw-------. 1 boincer umatlas    768000 Oct 13 10:06 result.tar.gz
[2025-10-13 10:06:36] -rw-r--r--. 1 boincer umatlas      8693 Oct 13 10:06 runtime_log.err
[2025-10-13 10:06:36] -rw-------. 1 boincer umatlas       652 Oct 13 10:06 E6qNDmejrP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1XSNDmCNSJ1n.diag
[2025-10-13 10:06:36] -rw-r--r--. 1 boincer umatlas     22362 Oct 13 10:06 stderr.txt
[2025-10-13 10:06:36] HITS file was successfully produced:
[2025-10-13 10:06:36] -rw-------. 1 boincer umatlas 181327361 Oct 13 10:05 shared/HITS.pool.root.1
[2025-10-13 10:06:36]  *** Contents of shared directory: ***
[2025-10-13 10:06:36] total 390300
[2025-10-13 10:06:36] -rw-r--r--. 2 boincer umatlas 216977158 Oct 13 09:14 ATLAS.root_0
[2025-10-13 10:06:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 09:14 start_atlas.sh
[2025-10-13 10:06:36] -rw-r--r--. 2 boincer umatlas    565601 Oct 13 09:14 input.tar.gz
[2025-10-13 10:06:36] -rw-------. 1 boincer umatlas 181327361 Oct 13 10:05 HITS.pool.root.1
[2025-10-13 10:06:36] -rw-------. 1 boincer umatlas    768000 Oct 13 10:06 result.tar.gz
10:06:37 (1281318): run_atlas exited; CPU time 20939.418126
10:06:37 (1281318): called boinc_finish(0)

</stderr_txt>
]]>

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