Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:11:34 (15643): wrapper (7.7.26015): starting
09:11:34 (15643): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 09:11:34] Arguments: --nthreads 9
[2025-10-13 09:11:34] Threads: 9
[2025-10-13 09:11:34] Checking for CVMFS
[2025-10-13 09:11:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:11:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:11:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:11:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:11:35] 2.13.2.0 5096 7163 91068 151661 2 387 20918789 40960000 17328 16776704 0 19324152 99.870 4809688 33325 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 09:11:35] CVMFS is ok
[2025-10-13 09:11:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:11:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:11:35] Further information can be found at the LHC@home message board.
[2025-10-13 09:11:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:11:35] Checking for apptainer binary...
[2025-10-13 09:11:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:11:35] Running /usr/bin/apptainer --version
[2025-10-13 09:11:35] apptainer version 1.4.3-1.el9
[2025-10-13 09:11:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:11:35] c-212-5.aglt2.org
[2025-10-13 09:11:35] apptainer works
[2025-10-13 09:11:35] Set ATHENA_PROC_NUMBER=9
[2025-10-13 09:11:35] Set ATHENA_CORE_NUMBER=9
[2025-10-13 09:11:35] Starting ATLAS job with PandaID=6841386758
[2025-10-13 09:11:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:46:10]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:46:10] 2025-10-13 15:45:13,488 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 11:46:10] 2025-10-13 15:45:13,490 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:46:10] 2025-10-13 15:45:13,490 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:46:10] 2025-10-13 15:45:13,493 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:46:10] 2025-10-13 15:45:13,507 | INFO     | sum of square deviations: 1067533187.894037
[2025-10-13 11:46:10] 2025-10-13 15:45:13,508 | INFO     | sum of deviations: 15496484232.953638
[2025-10-13 11:46:10] 2025-10-13 15:45:13,508 | INFO     | mean x: 1760365711.02649
[2025-10-13 11:46:10] 2025-10-13 15:45:13,508 | INFO     | mean y: 2540513.761589404
[2025-10-13 11:46:10] 2025-10-13 15:45:13,508 | INFO     | -- intersect: -25551212563.432648
[2025-10-13 11:46:10] 2025-10-13 15:45:13,508 | INFO     | intersect: -25551212563.432648
[2025-10-13 11:46:10] 2025-10-13 15:45:13,508 | INFO     | chi2: 2.363112781151797
[2025-10-13 11:46:10] 2025-10-13 15:45:13,509 | INFO     | sum of square deviations: 964955740.3904128
[2025-10-13 11:46:10] 2025-10-13 15:45:13,509 | INFO     | sum of deviations: 24540299656.513706
[2025-10-13 11:46:10] 2025-10-13 15:45:13,509 | INFO     | mean x: 1760365558.5273972
[2025-10-13 11:46:10] 2025-10-13 15:45:13,509 | INFO     | mean y: 2553571.7465753425
[2025-10-13 11:46:10] 2025-10-13 15:45:13,509 | INFO     | -- intersect: -44766233744.64385
[2025-10-13 11:46:10] 2025-10-13 15:45:13,509 | INFO     | intersect: -44766233744.64385
[2025-10-13 11:46:10] 2025-10-13 15:45:13,510 | INFO     | chi2: 1.680660581038785
[2025-10-13 11:46:10] 2025-10-13 15:45:13,510 | INFO     | current chi2=1.680660581038785 (change=28.879374931076306 %)
[2025-10-13 11:46:10] 2025-10-13 15:45:13,510 | INFO     | sum of square deviations: 869169117.8865247
[2025-10-13 11:46:10] 2025-10-13 15:45:13,510 | INFO     | sum of deviations: 23696202131.41133
[2025-10-13 11:46:10] 2025-10-13 15:45:13,510 | INFO     | mean x: 1760365406.0283687
[2025-10-13 11:46:10] 2025-10-13 15:45:13,511 | INFO     | mean y: 2552227.3971631206
[2025-10-13 11:46:10] 2025-10-13 15:45:13,520 | INFO     | -- intersect: -47990379905.102066
[2025-10-13 11:46:10] 2025-10-13 15:45:13,520 | INFO     | intersect: -47990379905.102066
[2025-10-13 11:46:10] 2025-10-13 15:45:13,520 | INFO     | chi2: 1.6821173722086626
[2025-10-13 11:46:10] 2025-10-13 15:45:13,520 | INFO     | current chi2=1.6821173722086626 (change=-0.08667967740263893 %)
[2025-10-13 11:46:10] 2025-10-13 15:45:13,520 | INFO     | right removable region: 140
[2025-10-13 11:46:10] 2025-10-13 15:45:13,521 | INFO     | sum of square deviations: 964953300.3904128
[2025-10-13 11:46:10] 2025-10-13 15:45:13,521 | INFO     | sum of deviations: -11494832866.061644
[2025-10-13 11:46:10] 2025-10-13 15:45:13,521 | INFO     | mean x: 1760365863.5273972
[2025-10-13 11:46:10] 2025-10-13 15:45:13,521 | INFO     | mean y: 2580189.390410959
[2025-10-13 11:46:10] 2025-10-13 15:45:13,521 | INFO     | -- intersect: 20972622341.87669
[2025-10-13 11:46:10] 2025-10-13 15:45:13,522 | INFO     | intersect: 20972622341.87669
[2025-10-13 11:46:10] 2025-10-13 15:45:13,522 | INFO     | chi2: 0.7886369857558012
[2025-10-13 11:46:10] 2025-10-13 15:45:13,522 | INFO     | current chi2=0.7886369857558012 (change=66.62719646535811 %)
[2025-10-13 11:46:10] 2025-10-13 15:45:13,522 | INFO     | sum of square deviations: 869164237.8865247
[2025-10-13 11:46:10] 2025-10-13 15:45:13,523 | INFO     | sum of deviations: -15875472452.808495
[2025-10-13 11:46:10] 2025-10-13 15:45:13,523 | INFO     | mean x: 1760366016.0283687
[2025-10-13 11:46:10] 2025-10-13 15:45:13,523 | INFO     | mean y: 2587085.7021276597
[2025-10-13 11:46:10] 2025-10-13 15:45:13,523 | INFO     | -- intersect: 32156052421.867085
[2025-10-13 11:46:10] 2025-10-13 15:45:13,523 | INFO     | intersect: 32156052421.867085
[2025-10-13 11:46:10] 2025-10-13 15:45:13,523 | INFO     | chi2: 0.7354281968549958
[2025-10-13 11:46:10] 2025-10-13 15:45:13,523 | INFO     | current chi2=0.7354281968549958 (change=6.746930446054594 %)
[2025-10-13 11:46:10] 2025-10-13 15:45:13,523 | INFO     | left removable region: 20
[2025-10-13 11:46:10] 2025-10-13 15:45:13,523 | INFO     | sum of square deviations: 535762881.86666626
[2025-10-13 11:46:10] 2025-10-13 15:45:13,531 | INFO     | sum of deviations: -5551761685.8
[2025-10-13 11:46:10] 2025-10-13 15:45:13,531 | INFO     | mean x: 1760365985.5333333
[2025-10-13 11:46:10] 2025-10-13 15:45:13,531 | INFO     | mean y: 2602074.7
[2025-10-13 11:46:10] 2025-10-13 15:45:13,531 | INFO     | -- intersect: 18244127873.237362
[2025-10-13 11:46:10] 2025-10-13 15:45:13,531 | INFO     | intersect: 18244127873.237362
[2025-10-13 11:46:10] 2025-10-13 15:45:13,532 | INFO     | chi2: 0.028018225216537386
[2025-10-13 11:46:10] 2025-10-13 15:45:13,532 | INFO     | -- intersect: 18244127873.237362
[2025-10-13 11:46:10] 2025-10-13 15:45:13,532 | INFO     | current memory leak: -10.36 B/s (using 120 data points, chi2=0.03)
[2025-10-13 11:46:10] 2025-10-13 15:45:13,532 | INFO     | could have reported an average CPU frequency of 2980 MHz (9 samples)
[2025-10-13 11:46:10] 2025-10-13 15:45:13,533 | INFO     | ..............................
[2025-10-13 11:46:10] 2025-10-13 15:45:13,533 | INFO     | . Timing measurements:
[2025-10-13 11:46:10] 2025-10-13 15:45:13,533 | INFO     | . get job = 0 s
[2025-10-13 11:46:10] 2025-10-13 15:45:13,533 | INFO     | . initial setup = 2 s
[2025-10-13 11:46:10] 2025-10-13 15:45:13,533 | INFO     | . payload setup = 6 s
[2025-10-13 11:46:10] 2025-10-13 15:45:13,533 | INFO     | . stage-in = 0 s
[2025-10-13 11:46:10] 2025-10-13 15:45:13,533 | INFO     | . payload execution = 9167 s
[2025-10-13 11:46:10] 2025-10-13 15:45:13,533 | INFO     | . stage-out = 0 s
[2025-10-13 11:46:10] 2025-10-13 15:45:13,533 | INFO     | . log creation = 0 s
[2025-10-13 11:46:10] 2025-10-13 15:45:13,533 | INFO     | ..............................
[2025-10-13 11:46:10] 2025-10-13 15:45:13,928 | INFO     | 
[2025-10-13 11:46:10] 2025-10-13 15:45:13,928 | INFO     | job summary report
[2025-10-13 11:46:10] 2025-10-13 15:45:13,928 | INFO     | --------------------------------------------------
[2025-10-13 11:46:10] 2025-10-13 15:45:13,929 | INFO     | PanDA job id: 6841386758
[2025-10-13 11:46:10] 2025-10-13 15:45:13,929 | INFO     | task id: 46676269
[2025-10-13 11:46:10] 2025-10-13 15:45:13,929 | INFO     | errors: (none)
[2025-10-13 11:46:10] 2025-10-13 15:45:13,929 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:46:10] 2025-10-13 15:45:13,929 | INFO     | pilot state: finished 
[2025-10-13 11:46:10] 2025-10-13 15:45:13,929 | INFO     | transexitcode: 0
[2025-10-13 11:46:10] 2025-10-13 15:45:13,929 | INFO     | exeerrorcode: 0
[2025-10-13 11:46:10] 2025-10-13 15:45:13,929 | INFO     | exeerrordiag: 
[2025-10-13 11:46:10] 2025-10-13 15:45:13,929 | INFO     | exitcode: 0
[2025-10-13 11:46:10] 2025-10-13 15:45:13,929 | INFO     | exitmsg: OK
[2025-10-13 11:46:10] 2025-10-13 15:45:13,929 | INFO     | cpuconsumptiontime: 37295 s
[2025-10-13 11:46:10] 2025-10-13 15:45:13,930 | INFO     | nevents: 400
[2025-10-13 11:46:10] 2025-10-13 15:45:13,930 | INFO     | neventsw: 0
[2025-10-13 11:46:10] 2025-10-13 15:45:13,930 | INFO     | pid: 27480
[2025-10-13 11:46:10] 2025-10-13 15:45:13,930 | INFO     | pgrp: 27480
[2025-10-13 11:46:10] 2025-10-13 15:45:13,930 | INFO     | corecount: 9
[2025-10-13 11:46:10] 2025-10-13 15:45:13,930 | INFO     | event service: False
[2025-10-13 11:46:10] 2025-10-13 15:45:13,930 | INFO     | sizes: {0: 2348807, 5: 2349069, 11: 2349125, 9177: 2377520, 9178: 2386518, 9181: 2386574, 9190: 2386960}
[2025-10-13 11:46:10] 2025-10-13 15:45:13,930 | INFO     | --------------------------------------------------
[2025-10-13 11:46:10] 2025-10-13 15:45:13,930 | INFO     | 
[2025-10-13 11:46:10] 2025-10-13 15:45:13,930 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 11:46:10] 2025-10-13 15:45:13,962 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:46:10] 2025-10-13 15:45:13,962 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:46:10] 2025-10-13 15:45:13,962 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:46:10] 2025-10-13 15:45:13,962 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:46:10] 2025-10-13 15:45:13,962 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:46:10] 2025-10-13 15:45:13,962 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:46:10] 2025-10-13 15:45:13,962 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:46:10] 2025-10-13 15:45:13,963 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:46:10] 2025-10-13 15:45:13,963 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:46:10] 2025-10-13 15:45:13,963 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:46:10] 2025-10-13 15:45:13,963 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:46:10] 2025-10-13 15:45:13,963 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:46:10] 2025-10-13 15:45:13,963 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:46:10] 2025-10-13 15:45:13,963 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:46:10] 2025-10-13 15:45:13,963 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:46:10] 2025-10-13 15:45:13,963 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:46:10] 2025-10-13 15:45:13,963 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:46:10] 2025-10-13 15:45:13,963 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:46:10] 2025-10-13 15:45:13,963 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:46:10] 2025-10-13 15:45:13,963 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:46:10] 2025-10-13 15:45:13,963 | INFO     | job 6841386758 has completed (purged errors)
[2025-10-13 11:46:10] 2025-10-13 15:45:13,964 | INFO     | overall cleanup function is called
[2025-10-13 11:46:10] 2025-10-13 15:45:14,973 | INFO     | --- collectZombieJob: --- 10, [27480]
[2025-10-13 11:46:10] 2025-10-13 15:45:14,973 | INFO     | zombie collector waiting for pid 27480
[2025-10-13 11:46:10] 2025-10-13 15:45:14,973 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:46:10] 2025-10-13 15:45:14,974 | INFO     | collected zombie processes
[2025-10-13 11:46:10] 2025-10-13 15:45:14,974 | INFO     | will attempt to kill all subprocesses of pid=27480
[2025-10-13 11:46:10] 2025-10-13 15:45:15,379 | INFO     | process IDs to be killed: [27480] (in reverse order)
[2025-10-13 11:46:10] 2025-10-13 15:45:15,496 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:46:10] 2025-10-13 15:45:15,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:46:10] 2025-10-13 15:45:15,512 | INFO     | did not find any defunct processes belonging to 27480
[2025-10-13 11:46:10] 2025-10-13 15:45:15,526 | INFO     | did not find any defunct processes belonging to 27480
[2025-10-13 11:46:10] 2025-10-13 15:45:15,527 | INFO     | ready for new job
[2025-10-13 11:46:10] 2025-10-13 15:45:15,527 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:46:10] 2025-10-13 15:45:15,530 | INFO     | ***************************************
[2025-10-13 11:46:10] 2025-10-13 15:45:15,530 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:46:10] 2025-10-13 15:45:15,531 | INFO     | ***************************************
[2025-10-13 11:46:10] 2025-10-13 15:45:15,531 | INFO     | 
[2025-10-13 11:46:10] 2025-10-13 15:45:15,537 | INFO     | architecture information:
[2025-10-13 11:46:10] 2025-10-13 15:45:15,537 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:46:10] 2025-10-13 15:45:15,558 | INFO     | cat /etc/os-release:
[2025-10-13 11:46:10] NAME="CentOS Linux"
[2025-10-13 11:46:10] VERSION="7 (Core)"
[2025-10-13 11:46:10] ID="centos"
[2025-10-13 11:46:10] ID_LIKE="rhel fedora"
[2025-10-13 11:46:10] VERSION_ID="7"
[2025-10-13 11:46:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:46:10] ANSI_COLOR="0;31"
[2025-10-13 11:46:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:46:10] HOME_URL="https://www.centos.org/"
[2025-10-13 11:46:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:46:10] 
[2025-10-13 11:46:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:46:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:46:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:46:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:46:10] 
[2025-10-13 11:46:10] 2025-10-13 15:45:15,559 | INFO     | ***************************************
[2025-10-13 11:46:10] 2025-10-13 15:45:16,062 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 11:46:10] 2025-10-13 15:45:16,088 | INFO     | sufficient remaining disk space (128448462848 B)
[2025-10-13 11:46:10] 2025-10-13 15:45:16,088 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:46:10] 2025-10-13 15:45:16,088 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:46:10] 2025-10-13 15:45:16,088 | INFO     | update_server=False
[2025-10-13 11:46:10] 2025-10-13 15:45:16,088 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:46:10] 2025-10-13 15:45:16,089 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:46:10] 2025-10-13 15:45:16,089 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:46:10] 2025-10-13 15:45:16,089 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:46:10] 2025-10-13 15:45:16,089 | INFO     | aborting loop
[2025-10-13 11:46:10] 2025-10-13 15:45:16,319 | INFO     | all payload control threads have been joined
[2025-10-13 11:46:10] 2025-10-13 15:45:16,544 | INFO     | all data control threads have been joined
[2025-10-13 11:46:10] 2025-10-13 15:45:17,094 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:46:10] 2025-10-13 15:45:17,095 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:46:10] 2025-10-13 15:45:17,161 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:46:10] 2025-10-13 15:45:17,325 | INFO     | [payload] control thread has finished
[2025-10-13 11:46:10] 2025-10-13 15:45:17,549 | INFO     | [data] control thread has finished
[2025-10-13 11:46:10] 2025-10-13 15:45:17,617 | INFO     | all job control threads have been joined
[2025-10-13 11:46:10] 2025-10-13 15:45:17,650 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:46:10] 2025-10-13 15:45:17,761 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:46:10] 2025-10-13 15:45:18,094 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:46:10] 2025-10-13 15:45:18,310 | INFO     | [job] validate thread has finished
[2025-10-13 11:46:10] 2025-10-13 15:45:18,321 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:46:10] 2025-10-13 15:45:18,384 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:46:10] 2025-10-13 15:45:18,468 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:46:10] 2025-10-13 15:45:18,482 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:46:10] 2025-10-13 15:45:18,623 | INFO     | [job] control thread has finished
[2025-10-13 11:46:10] 2025-10-13 15:45:18,651 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:46:10] 2025-10-13 15:45:19,657 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:46:10] 2025-10-13 15:45:20,097 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:46:10] 2025-10-13 15:45:45,490 | INFO     | PID=19797 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 11:46:10] 2025-10-13 15:45:45,490 | INFO     | .. there are 15 such processes running
[2025-10-13 11:46:10] 2025-10-13 15:45:45,491 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:46:10] 2025-10-13 15:45:45,491 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:46:10] 2025-10-13 15:45:45,492 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:46:10] 2025-10-13 15:46:02,704 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:46:10] 2025-10-13 15:46:04,614 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140205713712960)>', '<ExcThread(monitor, started 140205197596416)>']
[2025-10-13 11:46:10] 2025-10-13 15:46:05,610 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:46:10] 2025-10-13 15:46:05,610 | INFO     | [monitor] control thread has ended
[2025-10-13 11:46:10] 2025-10-13 15:46:09,640 | INFO     | all workflow threads have been joined
[2025-10-13 11:46:10] 2025-10-13 15:46:09,640 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:46:10] 2025-10-13 15:46:09,641 | INFO     | traces error code: 0
[2025-10-13 11:46:10] 2025-10-13 15:46:09,641 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:46:10] 2025-10-13 15:46:10,000 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:46:10] 2025-10-13 15:46:10,005 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:46:10] 2025-10-13 15:46:10,009 [wrapper] pilotpid: 19797
[2025-10-13 11:46:10] 2025-10-13 15:46:10,011 [wrapper] Pilot exit status: 0
[2025-10-13 11:46:10] 2025-10-13 15:46:10,033 [wrapper] pandaids: 6841386758
[2025-10-13 11:46:10] 2025-10-13 15:46:10,138 [wrapper] cleanup supervisor_pilot  342021 19799
[2025-10-13 11:46:10] 2025-10-13 15:46:10,180 [wrapper] Test setup, not cleaning
[2025-10-13 11:46:10] 2025-10-13 15:46:10,235 [wrapper] apfmon messages muted
[2025-10-13 11:46:10] 2025-10-13 15:46:10,277 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:46:10] 2025-10-13 15:46:10,291 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:46:10]  *** Error codes and diagnostics ***
[2025-10-13 11:46:10]     "exeErrorCode": 0,
[2025-10-13 11:46:10]     "exeErrorDiag": "",
[2025-10-13 11:46:10]     "pilotErrorCode": 0,
[2025-10-13 11:46:10]     "pilotErrorDiag": "",
[2025-10-13 11:46:10]  *** Listing of results directory ***
[2025-10-13 11:46:10] total 413812
[2025-10-13 11:46:10] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 11:46:10] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 22:33 queuedata.json
[2025-10-13 11:46:10] -rwx------. 1 boincer umatlas     36292 Oct 12 22:33 runpilot2-wrapper.sh
[2025-10-13 11:46:10] -rw-r--r--. 1 boincer umatlas       100 Oct 13 09:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:46:10] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 09:11 run_atlas
[2025-10-13 11:46:10] -rw-r--r--. 1 boincer umatlas       105 Oct 13 09:11 job.xml
[2025-10-13 11:46:10] -rw-r--r--. 2 boincer umatlas 222834975 Oct 13 09:11 EVNT.46676267._001171.pool.root.1
[2025-10-13 11:46:10] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 09:11 input.tar.gz
[2025-10-13 11:46:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 09:11 start_atlas.sh
[2025-10-13 11:46:10] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 09:11 shared
[2025-10-13 11:46:10] -rw-r--r--. 1 boincer umatlas         0 Oct 13 09:11 boinc_lockfile
[2025-10-13 11:46:10] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 09:11 pandaJob.out
[2025-10-13 11:46:10] -rw-------. 1 boincer umatlas    972497 Oct 13 09:11 agis_schedconf.cvmfs.json
[2025-10-13 11:46:10] -rw-------. 1 boincer umatlas   1560580 Oct 13 09:11 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:46:10] drwx------. 5 boincer umatlas      4096 Oct 13 09:11 pilot3
[2025-10-13 11:46:10] -rw-r--r--. 1 boincer umatlas      6945 Oct 13 11:38 init_data.xml
[2025-10-13 11:46:10] -rw-------. 1 boincer umatlas 193609656 Oct 13 11:44 HITS.46676269._095095.pool.root.1
[2025-10-13 11:46:10] -rw-r--r--. 1 boincer umatlas       530 Oct 13 11:44 boinc_task_state.xml
[2025-10-13 11:46:10] -rw-------. 1 boincer umatlas      1058 Oct 13 11:44 memory_monitor_summary.json
[2025-10-13 11:46:10] -rw-------. 1 boincer umatlas    415019 Oct 13 11:45 log.46676269._095095.job.log.tgz.1
[2025-10-13 11:46:10] -rw-------. 1 boincer umatlas      7809 Oct 13 11:45 heartbeat.json
[2025-10-13 11:46:10] -rw-------. 1 boincer umatlas        95 Oct 13 11:45 pilot_heartbeat.json
[2025-10-13 11:46:10] -rw-r--r--. 1 boincer umatlas        27 Oct 13 11:46 wrapper_checkpoint.txt
[2025-10-13 11:46:10] -rw-------. 1 boincer umatlas      4823 Oct 13 11:46 pilotlog.txt
[2025-10-13 11:46:10] -rw-------. 1 boincer umatlas   1285837 Oct 13 11:46 log.46676269._095095.job.log.1
[2025-10-13 11:46:10] -rw-------. 1 boincer umatlas       357 Oct 13 11:46 output.list
[2025-10-13 11:46:10] -rw-r--r--. 1 boincer umatlas       620 Oct 13 11:46 runtime_log
[2025-10-13 11:46:10] -rw-------. 1 boincer umatlas   1720320 Oct 13 11:46 result.tar.gz
[2025-10-13 11:46:10] -rw-r--r--. 1 boincer umatlas      8698 Oct 13 11:46 runtime_log.err
[2025-10-13 11:46:10] -rw-------. 1 boincer umatlas       656 Oct 13 11:46 bumLDmEYNS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjYVMDmWfTRKm.diag
[2025-10-13 11:46:10] -rw-r--r--. 1 boincer umatlas     20931 Oct 13 11:46 stderr.txt
[2025-10-13 11:46:10] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 11:46 boinc_mmap_file
[2025-10-13 11:46:10] HITS file was successfully produced:
[2025-10-13 11:46:10] -rw-------. 1 boincer umatlas 193609656 Oct 13 11:44 shared/HITS.pool.root.1
[2025-10-13 11:46:10]  *** Contents of shared directory: ***
[2025-10-13 11:46:10] total 408948
[2025-10-13 11:46:10] -rw-r--r--. 2 boincer umatlas 222834975 Oct 13 09:11 ATLAS.root_0
[2025-10-13 11:46:10] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 09:11 input.tar.gz
[2025-10-13 11:46:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 09:11 start_atlas.sh
[2025-10-13 11:46:10] -rw-------. 1 boincer umatlas 193609656 Oct 13 11:44 HITS.pool.root.1
[2025-10-13 11:46:10] -rw-------. 1 boincer umatlas   1720320 Oct 13 11:46 result.tar.gz
11:46:12 (15643): run_atlas exited; CPU time 37497.409678
11:46:12 (15643): called boinc_finish(0)

</stderr_txt>
]]>

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