Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:56:59 (7203): wrapper (7.7.26015): starting
08:56:59 (7203): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 08:56:59] Arguments: --nthreads 12
[2025-10-13 08:56:59] Threads: 12
[2025-10-13 08:56:59] Checking for CVMFS
[2025-10-13 08:56:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 08:56:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 08:56:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 08:57:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 08:57:00] 2.11.2.0 2913 224351 102864 151661 3 1 16483962 20275200 1 130560 1 110271062 99.984 13380124 12572 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 08:57:00] CVMFS is ok
[2025-10-13 08:57:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 08:57:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 08:57:00] Further information can be found at the LHC@home message board.
[2025-10-13 08:57:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 08:57:00] Checking for apptainer binary...
[2025-10-13 08:57:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 08:57:00] Running /usr/bin/apptainer --version
[2025-10-13 08:57:00] apptainer version 1.3.2-1.el7
[2025-10-13 08:57:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 08:57:01] c-205-6.aglt2.org
[2025-10-13 08:57:01] apptainer works
[2025-10-13 08:57:01] Set ATHENA_PROC_NUMBER=12
[2025-10-13 08:57:01] Set ATHENA_CORE_NUMBER=12
[2025-10-13 08:57:01] Starting ATLAS job with PandaID=6831276382
[2025-10-13 08:57:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:03:29]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:03:29]  status=None
[2025-10-13 10:03:29]  status_code=0
[2025-10-13 10:03:29]  storage_token=
[2025-10-13 10:03:29]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6831276382/log.46376905._080895.job.log.tgz.1
[2025-10-13 10:03:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/2e/log.46376905._080895.job.log.tgz.1
[2025-10-13 10:03:29]  workdir=None
[2025-10-13 10:03:29] ]
[2025-10-13 10:03:29] 2025-10-13 14:02:19,355 | INFO     | transferring file log.46376905._080895.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6831276382/log.46376905._080895.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 10:03:29] 2025-10-13 14:02:19,355 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6831276382/log.46376905._080895.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._080895.job
[2025-10-13 10:03:29] 2025-10-13 14:02:19,378 | INFO     | adding to output.list: log.46376905._080895.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/2e/log.46376905._080895.job.log.tg
[2025-10-13 10:03:29] 2025-10-13 14:02:19,379 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 10:03:29] 2025-10-13 14:02:19,379 | INFO     | summary of transferred files:
[2025-10-13 10:03:29] 2025-10-13 14:02:19,379 | INFO     |  -- lfn=log.46376905._080895.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 10:03:29] 2025-10-13 14:02:19,380 | INFO     | stage-out finished correctly
[2025-10-13 10:03:29] 2025-10-13 14:02:20,126 | INFO     | PID=11027 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 10:03:29] 2025-10-13 14:02:20,220 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 10:03:29] 2025-10-13 14:02:21,126 | INFO     | time since job start (3904s) is within the limit (172800.0s)
[2025-10-13 10:03:29] 2025-10-13 14:02:21,189 | INFO     | monitor loop #292: job 0:6831276382 is in state 'finished'
[2025-10-13 10:03:29] 2025-10-13 14:02:21,190 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:03:29] 2025-10-13 14:02:22,104 | INFO     | job 6831276382 has state=finished
[2025-10-13 10:03:29] 2025-10-13 14:02:22,104 | INFO     | preparing for final server update for job 6831276382 in state='finished'
[2025-10-13 10:03:29] 2025-10-13 14:02:22,105 | INFO     | this job has now completed (state=finished)
[2025-10-13 10:03:29] 2025-10-13 14:02:22,105 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 10:03:29] 2025-10-13 14:02:22,105 | INFO     | log transfer has been attempted: DONE
[2025-10-13 10:03:29] 2025-10-13 14:02:22,106 | INFO     | job 6831276382 has finished - writing final server update
[2025-10-13 10:03:29] 2025-10-13 14:02:22,106 | INFO     | total number of processed events: 400 (read)
[2025-10-13 10:03:29] 2025-10-13 14:02:22,107 | INFO     | executing command: lscpu
[2025-10-13 10:03:29] 2025-10-13 14:02:22,133 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 10:03:29] 2025-10-13 14:02:23,132 | INFO     | time since job start (3906s) is within the limit (172800.0s)
[2025-10-13 10:03:29] 2025-10-13 14:02:23,693 | INFO     | monitor loop #293: job 0:6831276382 is in state 'finished'
[2025-10-13 10:03:29] 2025-10-13 14:02:23,693 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:03:29] 2025-10-13 14:02:25,138 | INFO     | time since job start (3908s) is within the limit (172800.0s)
[2025-10-13 10:03:29] 2025-10-13 14:02:26,196 | INFO     | monitor loop #294: job 0:6831276382 is in state 'finished'
[2025-10-13 10:03:29] 2025-10-13 14:02:26,196 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:03:29] 2025-10-13 14:02:26,697 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 10:03:29] 2025-10-13 14:02:26,701 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1717.9166666666667
[2025-10-13 10:03:29] 2025-10-13 14:02:26,703 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6831276382/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 10:03:29] 2025-10-13 14:02:26,704 | INFO     | extracted standard info from prmon json
[2025-10-13 10:03:29] 2025-10-13 14:02:26,705 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 10:03:29] 2025-10-13 14:02:26,705 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 10:03:29] 2025-10-13 14:02:26,705 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 10:03:29] 2025-10-13 14:02:26,705 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:03:29] 2025-10-13 14:02:26,707 | INFO     | fitting pss+swap vs Time
[2025-10-13 10:03:29] 2025-10-13 14:02:26,708 | INFO     | sum of square deviations: 57407588.0
[2025-10-13 10:03:29] 2025-10-13 14:02:26,708 | INFO     | sum of deviations: -4351099500.0
[2025-10-13 10:03:29] 2025-10-13 14:02:26,708 | INFO     | mean x: 1760362279.0
[2025-10-13 10:03:29] 2025-10-13 14:02:26,708 | INFO     | mean y: 2734057.5614035088
[2025-10-13 10:03:29] 2025-10-13 14:02:26,709 | INFO     | -- intersect: 133426061858.33507
[2025-10-13 10:03:29] 2025-10-13 14:02:26,709 | INFO     | intersect: 133426061858.33507
[2025-10-13 10:03:29] 2025-10-13 14:02:26,709 | INFO     | chi2: 0.052191194330678634
[2025-10-13 10:03:29] 2025-10-13 14:02:26,709 | INFO     | -- intersect: 133426061858.33507
[2025-10-13 10:03:29] 2025-10-13 14:02:26,709 | INFO     | current memory leak: -75.79 B/s (using 57 data points, chi2=0.05)
[2025-10-13 10:03:29] 2025-10-13 14:02:26,709 | INFO     | could have reported an average CPU frequency of 2034 MHz (6 samples)
[2025-10-13 10:03:29] 2025-10-13 14:02:26,710 | INFO     | ..............................
[2025-10-13 10:03:29] 2025-10-13 14:02:26,710 | INFO     | . Timing measurements:
[2025-10-13 10:03:29] 2025-10-13 14:02:26,710 | INFO     | . get job = 0 s
[2025-10-13 10:03:29] 2025-10-13 14:02:26,710 | INFO     | . initial setup = 2 s
[2025-10-13 10:03:29] 2025-10-13 14:02:26,710 | INFO     | . payload setup = 7 s
[2025-10-13 10:03:29] 2025-10-13 14:02:26,710 | INFO     | . stage-in = 0 s
[2025-10-13 10:03:29] 2025-10-13 14:02:26,710 | INFO     | . payload execution = 3873 s
[2025-10-13 10:03:29] 2025-10-13 14:02:26,710 | INFO     | . stage-out = 0 s
[2025-10-13 10:03:29] 2025-10-13 14:02:26,710 | INFO     | . log creation = 0 s
[2025-10-13 10:03:29] 2025-10-13 14:02:26,711 | INFO     | ..............................
[2025-10-13 10:03:29] 2025-10-13 14:02:26,792 | INFO     | 
[2025-10-13 10:03:29] 2025-10-13 14:02:26,792 | INFO     | job summary report
[2025-10-13 10:03:29] 2025-10-13 14:02:26,793 | INFO     | --------------------------------------------------
[2025-10-13 10:03:29] 2025-10-13 14:02:26,793 | INFO     | PanDA job id: 6831276382
[2025-10-13 10:03:29] 2025-10-13 14:02:26,793 | INFO     | task id: 46376905
[2025-10-13 10:03:29] 2025-10-13 14:02:26,793 | INFO     | errors: (none)
[2025-10-13 10:03:29] 2025-10-13 14:02:26,793 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:03:29] 2025-10-13 14:02:26,794 | INFO     | pilot state: finished 
[2025-10-13 10:03:29] 2025-10-13 14:02:26,794 | INFO     | transexitcode: 0
[2025-10-13 10:03:29] 2025-10-13 14:02:26,794 | INFO     | exeerrorcode: 0
[2025-10-13 10:03:29] 2025-10-13 14:02:26,794 | INFO     | exeerrordiag: 
[2025-10-13 10:03:29] 2025-10-13 14:02:26,794 | INFO     | exitcode: 0
[2025-10-13 10:03:29] 2025-10-13 14:02:26,794 | INFO     | exitmsg: OK
[2025-10-13 10:03:29] 2025-10-13 14:02:26,794 | INFO     | cpuconsumptiontime: 41642 s
[2025-10-13 10:03:29] 2025-10-13 14:02:26,795 | INFO     | nevents: 400
[2025-10-13 10:03:29] 2025-10-13 14:02:26,795 | INFO     | neventsw: 0
[2025-10-13 10:03:29] 2025-10-13 14:02:26,795 | INFO     | pid: 18261
[2025-10-13 10:03:29] 2025-10-13 14:02:26,795 | INFO     | pgrp: 18261
[2025-10-13 10:03:29] 2025-10-13 14:02:26,795 | INFO     | corecount: 12
[2025-10-13 10:03:29] 2025-10-13 14:02:26,795 | INFO     | event service: False
[2025-10-13 10:03:29] 2025-10-13 14:02:26,796 | INFO     | sizes: {0: 2347988, 1: 2348844, 6: 2349106, 12: 2349134, 3885: 2374913, 3887: 2384095, 3894: 2384233}
[2025-10-13 10:03:29] 2025-10-13 14:02:26,796 | INFO     | --------------------------------------------------
[2025-10-13 10:03:29] 2025-10-13 14:02:26,796 | INFO     | 
[2025-10-13 10:03:29] 2025-10-13 14:02:26,796 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 10:03:29] 2025-10-13 14:02:26,820 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:03:29] 2025-10-13 14:02:26,820 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:03:29] 2025-10-13 14:02:26,821 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:03:29] 2025-10-13 14:02:26,821 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:03:29] 2025-10-13 14:02:26,821 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:03:29] 2025-10-13 14:02:26,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:03:29] 2025-10-13 14:02:26,821 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:03:29] 2025-10-13 14:02:26,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:03:29] 2025-10-13 14:02:26,822 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:03:29] 2025-10-13 14:02:26,822 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:03:29] 2025-10-13 14:02:26,822 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:03:29] 2025-10-13 14:02:26,822 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:03:29] 2025-10-13 14:02:26,822 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:03:29] 2025-10-13 14:02:26,822 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:03:29] 2025-10-13 14:02:26,823 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:03:29] 2025-10-13 14:02:26,823 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:03:29] 2025-10-13 14:02:26,823 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:03:29] 2025-10-13 14:02:26,823 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:03:29] 2025-10-13 14:02:26,823 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:03:29] 2025-10-13 14:02:26,823 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:03:29] 2025-10-13 14:02:26,824 | INFO     | job 6831276382 has completed (purged errors)
[2025-10-13 10:03:29] 2025-10-13 14:02:26,824 | INFO     | overall cleanup function is called
[2025-10-13 10:03:29] 2025-10-13 14:02:27,832 | INFO     | --- collectZombieJob: --- 10, [18261]
[2025-10-13 10:03:29] 2025-10-13 14:02:27,833 | INFO     | zombie collector waiting for pid 18261
[2025-10-13 10:03:29] 2025-10-13 14:02:27,833 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:03:29] 2025-10-13 14:02:27,833 | INFO     | collected zombie processes
[2025-10-13 10:03:29] 2025-10-13 14:02:27,833 | INFO     | will attempt to kill all subprocesses of pid=18261
[2025-10-13 10:03:29] 2025-10-13 14:02:27,927 | INFO     | process IDs to be killed: [18261] (in reverse order)
[2025-10-13 10:03:29] 2025-10-13 14:02:27,986 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:03:29] 2025-10-13 14:02:27,986 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:03:29] 2025-10-13 14:02:27,989 | INFO     | did not find any defunct processes belonging to 18261
[2025-10-13 10:03:29] 2025-10-13 14:02:27,992 | INFO     | did not find any defunct processes belonging to 18261
[2025-10-13 10:03:29] 2025-10-13 14:02:27,992 | INFO     | ready for new job
[2025-10-13 10:03:29] 2025-10-13 14:02:27,992 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:03:29] 2025-10-13 14:02:27,994 | INFO     | ***************************************
[2025-10-13 10:03:29] 2025-10-13 14:02:27,994 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 10:03:29] 2025-10-13 14:02:27,994 | INFO     | ***************************************
[2025-10-13 10:03:29] 2025-10-13 14:02:27,994 | INFO     | 
[2025-10-13 10:03:29] 2025-10-13 14:02:27,994 | INFO     | architecture information:
[2025-10-13 10:03:29] 2025-10-13 14:02:27,995 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:03:29] 2025-10-13 14:02:28,010 | INFO     | cat /etc/os-release:
[2025-10-13 10:03:29] NAME="CentOS Linux"
[2025-10-13 10:03:29] VERSION="7 (Core)"
[2025-10-13 10:03:29] ID="centos"
[2025-10-13 10:03:29] ID_LIKE="rhel fedora"
[2025-10-13 10:03:29] VERSION_ID="7"
[2025-10-13 10:03:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:03:29] ANSI_COLOR="0;31"
[2025-10-13 10:03:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:03:29] HOME_URL="https://www.centos.org/"
[2025-10-13 10:03:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:03:29] 
[2025-10-13 10:03:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:03:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:03:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:03:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:03:29] 
[2025-10-13 10:03:29] 2025-10-13 14:02:28,011 | INFO     | ***************************************
[2025-10-13 10:03:29] 2025-10-13 14:02:28,514 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 10:03:29] 2025-10-13 14:02:28,531 | INFO     | sufficient remaining disk space (29393682432 B)
[2025-10-13 10:03:29] 2025-10-13 14:02:28,531 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:03:29] 2025-10-13 14:02:28,532 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:03:29] 2025-10-13 14:02:28,532 | INFO     | update_server=False
[2025-10-13 10:03:29] 2025-10-13 14:02:28,532 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:03:29] 2025-10-13 14:02:28,532 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:03:29] 2025-10-13 14:02:28,707 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 10:03:29] 2025-10-13 14:02:28,707 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 10:03:29] 2025-10-13 14:02:28,707 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:03:29] 2025-10-13 14:02:28,707 | INFO     | will abort loop
[2025-10-13 10:03:29] 2025-10-13 14:02:29,206 | INFO     | all data control threads have been joined
[2025-10-13 10:03:29] 2025-10-13 14:02:29,231 | INFO     | all payload control threads have been joined
[2025-10-13 10:03:29] 2025-10-13 14:02:29,537 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:03:29] 2025-10-13 14:02:29,538 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:03:29] 2025-10-13 14:02:29,547 | INFO     | all job control threads have been joined
[2025-10-13 10:03:29] 2025-10-13 14:02:29,604 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:03:29] 2025-10-13 14:02:29,713 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:03:29] 2025-10-13 14:02:29,979 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:03:29] 2025-10-13 14:02:30,035 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:03:29] 2025-10-13 14:02:30,153 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:03:29] 2025-10-13 14:02:30,211 | INFO     | [data] control thread has finished
[2025-10-13 10:03:29] 2025-10-13 14:02:30,234 | INFO     | [payload] control thread has finished
[2025-10-13 10:03:29] 2025-10-13 14:02:30,311 | INFO     | [job] validate thread has finished
[2025-10-13 10:03:29] 2025-10-13 14:02:30,552 | INFO     | [job] control thread has finished
[2025-10-13 10:03:29] 2025-10-13 14:02:30,700 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:03:29] 2025-10-13 14:02:30,756 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:03:29] 2025-10-13 14:02:30,813 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:03:29] 2025-10-13 14:02:30,826 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:03:29] 2025-10-13 14:02:31,984 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:03:29] 2025-10-13 14:02:34,819 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:03:29] 2025-10-13 14:02:39,515 | INFO     | job.realtimelogging is not enabled
[2025-10-13 10:03:29] 2025-10-13 14:02:40,520 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:03:29] 2025-10-13 14:02:58,346 | INFO     | PID=11027 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 10:03:29] 2025-10-13 14:02:58,346 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:03:29] 2025-10-13 14:02:58,346 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:03:29] 2025-10-13 14:02:58,346 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:03:29] 2025-10-13 14:03:23,017 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:03:29] 2025-10-13 14:03:24,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140135363217216)>', '<ExcThread(monitor, started 140134607464192)>']
[2025-10-13 10:03:29] 2025-10-13 14:03:25,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:03:29] 2025-10-13 14:03:25,481 | INFO     | [monitor] control thread has ended
[2025-10-13 10:03:29] 2025-10-13 14:03:29,580 | INFO     | all workflow threads have been joined
[2025-10-13 10:03:29] 2025-10-13 14:03:29,580 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:03:29] 2025-10-13 14:03:29,580 | INFO     | traces error code: 0
[2025-10-13 10:03:29] 2025-10-13 14:03:29,581 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:03:29] 2025-10-13 14:03:29,683 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:03:29] 2025-10-13 14:03:29,686 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:03:29] 2025-10-13 14:03:29,690 [wrapper] pilotpid: 11027
[2025-10-13 10:03:29] 2025-10-13 14:03:29,694 [wrapper] Pilot exit status: 0
[2025-10-13 10:03:29] 2025-10-13 14:03:29,711 [wrapper] pandaids: 6831276382
[2025-10-13 10:03:29] 2025-10-13 14:03:29,758 [wrapper] cleanup supervisor_pilot 25640 11028
[2025-10-13 10:03:29] 2025-10-13 14:03:29,761 [wrapper] Test setup, not cleaning
[2025-10-13 10:03:29] 2025-10-13 14:03:29,765 [wrapper] apfmon messages muted
[2025-10-13 10:03:29] 2025-10-13 14:03:29,769 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:03:29] 2025-10-13 14:03:29,773 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:03:29]  *** Error codes and diagnostics ***
[2025-10-13 10:03:29]     "exeErrorCode": 0,
[2025-10-13 10:03:29]     "exeErrorDiag": "",
[2025-10-13 10:03:29]     "pilotErrorCode": 0,
[2025-10-13 10:03:29]     "pilotErrorDiag": "",
[2025-10-13 10:03:29]  *** Listing of results directory ***
[2025-10-13 10:03:29] total 390908
[2025-10-13 10:03:29] -rw-r--r-- 1 boincer umatlas    552446 Oct  5 05:49 pilot3.tar.gz
[2025-10-13 10:03:29] -rwx------ 1 boincer umatlas     36292 Oct  5 05:53 runpilot2-wrapper.sh
[2025-10-13 10:03:29] -rw-r--r-- 1 boincer umatlas      5112 Oct  5 05:53 queuedata.json
[2025-10-13 10:03:29] -rw-r--r-- 1 boincer umatlas       100 Oct 13 08:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:03:29] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 08:56 run_atlas
[2025-10-13 10:03:29] -rw-r--r-- 1 boincer umatlas       105 Oct 13 08:56 job.xml
[2025-10-13 10:03:29] -rw-r--r-- 2 boincer umatlas 212633602 Oct 13 08:56 EVNT.46376901._002962.pool.root.1
[2025-10-13 10:03:29] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 08:56 start_atlas.sh
[2025-10-13 10:03:29] drwxrwx--x 2 boincer umatlas      4096 Oct 13 08:56 shared
[2025-10-13 10:03:29] -rw-r--r-- 2 boincer umatlas    565599 Oct 13 08:56 input.tar.gz
[2025-10-13 10:03:29] -rw-r--r-- 1 boincer umatlas         0 Oct 13 08:56 boinc_lockfile
[2025-10-13 10:03:29] -rw-r--r-- 1 boincer umatlas      2519 Oct 13 08:57 pandaJob.out
[2025-10-13 10:03:29] -rw------- 1 boincer umatlas    972497 Oct 13 08:57 agis_schedconf.cvmfs.json
[2025-10-13 10:03:29] -rw------- 1 boincer umatlas   1560580 Oct 13 08:57 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:03:29] drwx------ 4 boincer umatlas      4096 Oct 13 08:57 pilot3
[2025-10-13 10:03:29] -rw------- 1 boincer umatlas 181901742 Oct 13 10:01 HITS.46376905._080895.pool.root.1
[2025-10-13 10:03:29] -rw-r--r-- 1 boincer umatlas      5951 Oct 13 10:02 init_data.xml
[2025-10-13 10:03:29] -rw-r--r-- 1 boincer umatlas       529 Oct 13 10:02 boinc_task_state.xml
[2025-10-13 10:03:29] -rw------- 1 boincer umatlas        95 Oct 13 10:02 pilot_heartbeat.json
[2025-10-13 10:03:29] -rw------- 1 boincer umatlas      1046 Oct 13 10:02 memory_monitor_summary.json
[2025-10-13 10:03:29] -rw------- 1 boincer umatlas    364731 Oct 13 10:02 log.46376905._080895.job.log.tgz.1
[2025-10-13 10:03:29] -rw------- 1 boincer umatlas      7849 Oct 13 10:02 heartbeat.json
[2025-10-13 10:03:29] -rw-r--r-- 1 boincer umatlas        27 Oct 13 10:03 wrapper_checkpoint.txt
[2025-10-13 10:03:29] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 10:03 boinc_mmap_file
[2025-10-13 10:03:29] -rw------- 1 boincer umatlas      5004 Oct 13 10:03 pilotlog.txt
[2025-10-13 10:03:29] -rw------- 1 boincer umatlas    572487 Oct 13 10:03 log.46376905._080895.job.log.1
[2025-10-13 10:03:29] -rw------- 1 boincer umatlas       357 Oct 13 10:03 output.list
[2025-10-13 10:03:29] -rw-r--r-- 1 boincer umatlas       620 Oct 13 10:03 runtime_log
[2025-10-13 10:03:29] -rw------- 1 boincer umatlas    952320 Oct 13 10:03 result.tar.gz
[2025-10-13 10:03:29] -rw-r--r-- 1 boincer umatlas      8700 Oct 13 10:03 runtime_log.err
[2025-10-13 10:03:29] -rw------- 1 boincer umatlas       658 Oct 13 10:03 fF5NDmcbaP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTmONDmcZqF0n.diag
[2025-10-13 10:03:29] -rw-r--r-- 1 boincer umatlas     22066 Oct 13 10:03 stderr.txt
[2025-10-13 10:03:29] HITS file was successfully produced:
[2025-10-13 10:03:29] -rw------- 1 boincer umatlas 181901742 Oct 13 10:01 shared/HITS.pool.root.1
[2025-10-13 10:03:29]  *** Contents of shared directory: ***
[2025-10-13 10:03:29] total 386796
[2025-10-13 10:03:29] -rw-r--r-- 2 boincer umatlas 212633602 Oct 13 08:56 ATLAS.root_0
[2025-10-13 10:03:29] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 08:56 start_atlas.sh
[2025-10-13 10:03:29] -rw-r--r-- 2 boincer umatlas    565599 Oct 13 08:56 input.tar.gz
[2025-10-13 10:03:29] -rw------- 1 boincer umatlas 181901742 Oct 13 10:01 HITS.pool.root.1
[2025-10-13 10:03:29] -rw------- 1 boincer umatlas    952320 Oct 13 10:03 result.tar.gz
10:03:31 (7203): run_atlas exited; CPU time 41615.842081
10:03:31 (7203): called boinc_finish(0)

</stderr_txt>
]]>

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