Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:40:36 (494789): wrapper (7.7.26015): starting
08:40:36 (494789): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 08:40:36] Arguments: --nthreads 9
[2025-10-13 08:40:36] Threads: 9
[2025-10-13 08:40:36] Checking for CVMFS
[2025-10-13 08:40:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 08:40:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 08:40:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 08:40:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 08:40:38] 2.13.2.0 2849342 130694 524984 151661 0 305 21317846 32935936 27739 16776704 0 269625342 99.644 247311256 20822 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 08:40:38] CVMFS is ok
[2025-10-13 08:40:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 08:40:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 08:40:38] Further information can be found at the LHC@home message board.
[2025-10-13 08:40:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 08:40:38] Checking for apptainer binary...
[2025-10-13 08:40:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 08:40:38] Running /usr/bin/apptainer --version
[2025-10-13 08:40:38] apptainer version 1.4.3-1.el9
[2025-10-13 08:40:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 08:40:39] c6-8-25-4.aglt2.org
[2025-10-13 08:40:39] apptainer works
[2025-10-13 08:40:39] Set ATHENA_PROC_NUMBER=9
[2025-10-13 08:40:39] Set ATHENA_CORE_NUMBER=9
[2025-10-13 08:40:39] Starting ATLAS job with PandaID=6839989445
[2025-10-13 08:40:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:03:00]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:03:00] 2025-10-13 15:02:04,622 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 11:03:00] 2025-10-13 15:02:04,622 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:03:00] 2025-10-13 15:02:04,622 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:03:00] 2025-10-13 15:02:04,625 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:03:00] 2025-10-13 15:02:04,626 | INFO     | sum of square deviations: 779984639.9338263
[2025-10-13 11:03:00] 2025-10-13 15:02:04,626 | INFO     | sum of deviations: 20589480622.845596
[2025-10-13 11:03:00] 2025-10-13 15:02:04,627 | INFO     | mean x: 1760363541.7720587
[2025-10-13 11:03:00] 2025-10-13 15:02:04,627 | INFO     | mean y: 2168940.8014705884
[2025-10-13 11:03:00] 2025-10-13 15:02:04,627 | INFO     | -- intersect: -46466657721.675705
[2025-10-13 11:03:00] 2025-10-13 15:02:04,627 | INFO     | intersect: -46466657721.675705
[2025-10-13 11:03:00] 2025-10-13 15:02:04,627 | INFO     | chi2: 2.357041261733573
[2025-10-13 11:03:00] 2025-10-13 15:02:04,627 | INFO     | sum of square deviations: 697083748.1068685
[2025-10-13 11:03:00] 2025-10-13 15:02:04,628 | INFO     | sum of deviations: 20787767041.801525
[2025-10-13 11:03:00] 2025-10-13 15:02:04,628 | INFO     | mean x: 1760363389.2748091
[2025-10-13 11:03:00] 2025-10-13 15:02:04,628 | INFO     | mean y: 2169274.0610687025
[2025-10-13 11:03:00] 2025-10-13 15:02:04,628 | INFO     | -- intersect: -52493709656.61621
[2025-10-13 11:03:00] 2025-10-13 15:02:04,628 | INFO     | intersect: -52493709656.61621
[2025-10-13 11:03:00] 2025-10-13 15:02:04,629 | INFO     | chi2: 2.353061087925667
[2025-10-13 11:03:00] 2025-10-13 15:02:04,629 | INFO     | current chi2=2.353061087925667 (change=0.16886313670125555 %)
[2025-10-13 11:03:00] 2025-10-13 15:02:04,629 | INFO     | right removable region: 130
[2025-10-13 11:03:00] 2025-10-13 15:02:04,629 | INFO     | sum of square deviations: 697069474.5496198
[2025-10-13 11:03:00] 2025-10-13 15:02:04,630 | INFO     | sum of deviations: -3983130850.816795
[2025-10-13 11:03:00] 2025-10-13 15:02:04,630 | INFO     | mean x: 1760363694.2824428
[2025-10-13 11:03:00] 2025-10-13 15:02:04,630 | INFO     | mean y: 2213686.427480916
[2025-10-13 11:03:00] 2025-10-13 15:02:04,630 | INFO     | -- intersect: 10061123444.14504
[2025-10-13 11:03:00] 2025-10-13 15:02:04,630 | INFO     | intersect: 10061123444.14504
[2025-10-13 11:03:00] 2025-10-13 15:02:04,630 | INFO     | chi2: 0.3230419603370202
[2025-10-13 11:03:00] 2025-10-13 15:02:04,630 | INFO     | current chi2=0.3230419603370202 (change=86.29459884383073 %)
[2025-10-13 11:03:00] 2025-10-13 15:02:04,631 | INFO     | sum of square deviations: 620247446.6349198
[2025-10-13 11:03:00] 2025-10-13 15:02:04,631 | INFO     | sum of deviations: -11676230547.047619
[2025-10-13 11:03:00] 2025-10-13 15:02:04,631 | INFO     | mean x: 1760363846.7936509
[2025-10-13 11:03:00] 2025-10-13 15:02:04,631 | INFO     | mean y: 2228815.1904761903
[2025-10-13 11:03:00] 2025-10-13 15:02:04,632 | INFO     | -- intersect: 33141283612.378048
[2025-10-13 11:03:00] 2025-10-13 15:02:04,632 | INFO     | intersect: 33141283612.378048
[2025-10-13 11:03:00] 2025-10-13 15:02:04,632 | INFO     | chi2: 0.08606657269352218
[2025-10-13 11:03:00] 2025-10-13 15:02:04,632 | INFO     | current chi2=0.08606657269352218 (change=73.35746334509255 %)
[2025-10-13 11:03:00] 2025-10-13 15:02:04,632 | INFO     | sum of square deviations: 549293435.289254
[2025-10-13 11:03:00] 2025-10-13 15:02:04,633 | INFO     | sum of deviations: -9909206398.611572
[2025-10-13 11:03:00] 2025-10-13 15:02:04,633 | INFO     | mean x: 1760363999.2975206
[2025-10-13 11:03:00] 2025-10-13 15:02:04,633 | INFO     | mean y: 2224978.628099174
[2025-10-13 11:03:00] 2025-10-13 15:02:04,633 | INFO     | -- intersect: 31759040343.695522
[2025-10-13 11:03:00] 2025-10-13 15:02:04,633 | INFO     | intersect: 31759040343.695522
[2025-10-13 11:03:00] 2025-10-13 15:02:04,633 | INFO     | chi2: 0.08369108542247926
[2025-10-13 11:03:00] 2025-10-13 15:02:04,633 | INFO     | current chi2=0.08369108542247926 (change=2.760057937361913 %)
[2025-10-13 11:03:00] 2025-10-13 15:02:04,633 | INFO     | left removable region: 30
[2025-10-13 11:03:00] 2025-10-13 15:02:04,634 | INFO     | sum of square deviations: 310074305.16
[2025-10-13 11:03:00] 2025-10-13 15:02:04,634 | INFO     | sum of deviations: -1191774200.6599998
[2025-10-13 11:03:00] 2025-10-13 15:02:04,634 | INFO     | mean x: 1760364273.78
[2025-10-13 11:03:00] 2025-10-13 15:02:04,634 | INFO     | mean y: 2207853.47
[2025-10-13 11:03:00] 2025-10-13 15:02:04,634 | INFO     | -- intersect: 6768188427.616651
[2025-10-13 11:03:00] 2025-10-13 15:02:04,634 | INFO     | intersect: 6768188427.616651
[2025-10-13 11:03:00] 2025-10-13 15:02:04,635 | INFO     | chi2: 0.04176582668495511
[2025-10-13 11:03:00] 2025-10-13 15:02:04,635 | INFO     | -- intersect: 6768188427.616651
[2025-10-13 11:03:00] 2025-10-13 15:02:04,635 | INFO     | current memory leak: -3.84 B/s (using 100 data points, chi2=0.04)
[2025-10-13 11:03:00] 2025-10-13 15:02:04,635 | INFO     | could have reported an average CPU frequency of 2556 MHz (8 samples)
[2025-10-13 11:03:00] 2025-10-13 15:02:04,636 | INFO     | ..............................
[2025-10-13 11:03:00] 2025-10-13 15:02:04,636 | INFO     | . Timing measurements:
[2025-10-13 11:03:00] 2025-10-13 15:02:04,636 | INFO     | . get job = 0 s
[2025-10-13 11:03:00] 2025-10-13 15:02:04,636 | INFO     | . initial setup = 5 s
[2025-10-13 11:03:00] 2025-10-13 15:02:04,636 | INFO     | . payload setup = 36 s
[2025-10-13 11:03:00] 2025-10-13 15:02:04,636 | INFO     | . stage-in = 0 s
[2025-10-13 11:03:00] 2025-10-13 15:02:04,636 | INFO     | . payload execution = 8311 s
[2025-10-13 11:03:00] 2025-10-13 15:02:04,636 | INFO     | . stage-out = 1 s
[2025-10-13 11:03:00] 2025-10-13 15:02:04,636 | INFO     | . log creation = 0 s
[2025-10-13 11:03:00] 2025-10-13 15:02:04,636 | INFO     | ..............................
[2025-10-13 11:03:00] 2025-10-13 15:02:04,739 | INFO     | 
[2025-10-13 11:03:00] 2025-10-13 15:02:04,739 | INFO     | job summary report
[2025-10-13 11:03:00] 2025-10-13 15:02:04,739 | INFO     | --------------------------------------------------
[2025-10-13 11:03:00] 2025-10-13 15:02:04,739 | INFO     | PanDA job id: 6839989445
[2025-10-13 11:03:00] 2025-10-13 15:02:04,739 | INFO     | task id: 46676269
[2025-10-13 11:03:00] 2025-10-13 15:02:04,739 | INFO     | errors: (none)
[2025-10-13 11:03:00] 2025-10-13 15:02:04,739 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:03:00] 2025-10-13 15:02:04,739 | INFO     | pilot state: finished 
[2025-10-13 11:03:00] 2025-10-13 15:02:04,739 | INFO     | transexitcode: 0
[2025-10-13 11:03:00] 2025-10-13 15:02:04,739 | INFO     | exeerrorcode: 0
[2025-10-13 11:03:00] 2025-10-13 15:02:04,740 | INFO     | exeerrordiag: 
[2025-10-13 11:03:00] 2025-10-13 15:02:04,740 | INFO     | exitcode: 0
[2025-10-13 11:03:00] 2025-10-13 15:02:04,740 | INFO     | exitmsg: OK
[2025-10-13 11:03:00] 2025-10-13 15:02:04,740 | INFO     | cpuconsumptiontime: 45562 s
[2025-10-13 11:03:00] 2025-10-13 15:02:04,740 | INFO     | nevents: 400
[2025-10-13 11:03:00] 2025-10-13 15:02:04,740 | INFO     | neventsw: 0
[2025-10-13 11:03:00] 2025-10-13 15:02:04,740 | INFO     | pid: 509983
[2025-10-13 11:03:00] 2025-10-13 15:02:04,740 | INFO     | pgrp: 509983
[2025-10-13 11:03:00] 2025-10-13 15:02:04,740 | INFO     | corecount: 9
[2025-10-13 11:03:00] 2025-10-13 15:02:04,740 | INFO     | event service: False
[2025-10-13 11:03:00] 2025-10-13 15:02:04,740 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 13: 2348913, 23: 2348969, 28: 2349259, 34: 2349415, 8351: 2377207, 8354: 2386261, 8365: 2386399}
[2025-10-13 11:03:00] 2025-10-13 15:02:04,740 | INFO     | --------------------------------------------------
[2025-10-13 11:03:00] 2025-10-13 15:02:04,740 | INFO     | 
[2025-10-13 11:03:00] 2025-10-13 15:02:04,741 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 11:03:00] 2025-10-13 15:02:04,814 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:03:00] 2025-10-13 15:02:04,814 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:03:00] 2025-10-13 15:02:04,814 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:03:00] 2025-10-13 15:02:04,814 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:03:00] 2025-10-13 15:02:04,814 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:03:00] 2025-10-13 15:02:04,814 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:03:00] 2025-10-13 15:02:04,814 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:03:00] 2025-10-13 15:02:04,814 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:03:00] 2025-10-13 15:02:04,815 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:03:00] 2025-10-13 15:02:04,815 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:03:00] 2025-10-13 15:02:04,815 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:03:00] 2025-10-13 15:02:04,815 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:03:00] 2025-10-13 15:02:04,815 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:03:00] 2025-10-13 15:02:04,815 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:03:00] 2025-10-13 15:02:04,815 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:03:00] 2025-10-13 15:02:04,815 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:03:00] 2025-10-13 15:02:04,815 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:03:00] 2025-10-13 15:02:04,815 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:03:00] 2025-10-13 15:02:04,815 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:03:00] 2025-10-13 15:02:04,815 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:03:00] 2025-10-13 15:02:04,816 | INFO     | job 6839989445 has completed (purged errors)
[2025-10-13 11:03:00] 2025-10-13 15:02:04,816 | INFO     | overall cleanup function is called
[2025-10-13 11:03:00] 2025-10-13 15:02:05,825 | INFO     | --- collectZombieJob: --- 10, [509983]
[2025-10-13 11:03:00] 2025-10-13 15:02:05,826 | INFO     | zombie collector waiting for pid 509983
[2025-10-13 11:03:00] 2025-10-13 15:02:05,826 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:03:00] 2025-10-13 15:02:05,826 | INFO     | collected zombie processes
[2025-10-13 11:03:00] 2025-10-13 15:02:05,826 | INFO     | will attempt to kill all subprocesses of pid=509983
[2025-10-13 11:03:00] 2025-10-13 15:02:06,218 | INFO     | process IDs to be killed: [509983] (in reverse order)
[2025-10-13 11:03:00] 2025-10-13 15:02:06,362 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:03:00] 2025-10-13 15:02:06,363 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:03:00] 2025-10-13 15:02:06,380 | INFO     | did not find any defunct processes belonging to 509983
[2025-10-13 11:03:00] 2025-10-13 15:02:06,397 | INFO     | did not find any defunct processes belonging to 509983
[2025-10-13 11:03:00] 2025-10-13 15:02:06,397 | INFO     | ready for new job
[2025-10-13 11:03:00] 2025-10-13 15:02:06,397 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:03:00] 2025-10-13 15:02:06,399 | INFO     | ***************************************
[2025-10-13 11:03:00] 2025-10-13 15:02:06,399 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:03:00] 2025-10-13 15:02:06,400 | INFO     | ***************************************
[2025-10-13 11:03:00] 2025-10-13 15:02:06,400 | INFO     | 
[2025-10-13 11:03:00] 2025-10-13 15:02:06,418 | INFO     | architecture information:
[2025-10-13 11:03:00] 2025-10-13 15:02:06,419 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:03:00] 2025-10-13 15:02:06,440 | INFO     | cat /etc/os-release:
[2025-10-13 11:03:00] NAME="CentOS Linux"
[2025-10-13 11:03:00] VERSION="7 (Core)"
[2025-10-13 11:03:00] ID="centos"
[2025-10-13 11:03:00] ID_LIKE="rhel fedora"
[2025-10-13 11:03:00] VERSION_ID="7"
[2025-10-13 11:03:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:03:00] ANSI_COLOR="0;31"
[2025-10-13 11:03:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:03:00] HOME_URL="https://www.centos.org/"
[2025-10-13 11:03:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:03:00] 
[2025-10-13 11:03:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:03:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:03:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:03:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:03:00] 
[2025-10-13 11:03:00] 2025-10-13 15:02:06,440 | INFO     | ***************************************
[2025-10-13 11:03:00] 2025-10-13 15:02:06,943 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 11:03:00] 2025-10-13 15:02:06,968 | INFO     | sufficient remaining disk space (74891395072 B)
[2025-10-13 11:03:00] 2025-10-13 15:02:06,968 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:03:00] 2025-10-13 15:02:06,969 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:03:00] 2025-10-13 15:02:06,969 | INFO     | update_server=False
[2025-10-13 11:03:00] 2025-10-13 15:02:06,969 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:03:00] 2025-10-13 15:02:06,969 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:03:00] 2025-10-13 15:02:07,605 | INFO     | all payload control threads have been joined
[2025-10-13 11:03:00] 2025-10-13 15:02:07,642 | INFO     | all job control threads have been joined
[2025-10-13 11:03:00] 2025-10-13 15:02:07,766 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:03:00] 2025-10-13 15:02:07,766 | INFO     | aborting loop
[2025-10-13 11:03:00] 2025-10-13 15:02:07,974 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:03:00] 2025-10-13 15:02:07,979 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:03:00] 2025-10-13 15:02:08,054 | INFO     | all data control threads have been joined
[2025-10-13 11:03:00] 2025-10-13 15:02:08,344 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:03:00] 2025-10-13 15:02:08,391 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:03:00] 2025-10-13 15:02:08,610 | INFO     | [payload] control thread has finished
[2025-10-13 11:03:00] 2025-10-13 15:02:08,647 | INFO     | [job] control thread has finished
[2025-10-13 11:03:00] 2025-10-13 15:02:08,765 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:03:00] 2025-10-13 15:02:08,772 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:03:00] 2025-10-13 15:02:08,778 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:03:00] 2025-10-13 15:02:08,779 | INFO     | [job] validate thread has finished
[2025-10-13 11:03:00] 2025-10-13 15:02:08,933 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:03:00] 2025-10-13 15:02:08,975 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:03:00] 2025-10-13 15:02:09,060 | INFO     | [data] control thread has finished
[2025-10-13 11:03:00] 2025-10-13 15:02:09,201 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:03:00] 2025-10-13 15:02:09,417 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:03:00] 2025-10-13 15:02:09,755 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:03:00] 2025-10-13 15:02:10,762 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:03:00] 2025-10-13 15:02:13,209 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:03:00] 2025-10-13 15:02:36,569 | INFO     | PID=500280 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 11:03:00] 2025-10-13 15:02:36,569 | INFO     | .. there are 27 such processes running
[2025-10-13 11:03:00] 2025-10-13 15:02:36,570 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:03:00] 2025-10-13 15:02:36,570 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:03:00] 2025-10-13 15:02:36,570 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:03:00] 2025-10-13 15:02:54,182 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:03:00] 2025-10-13 15:02:54,999 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139672405800768)>', '<ExcThread(monitor, started 139671891846912)>']
[2025-10-13 11:03:00] 2025-10-13 15:02:55,666 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:03:00] 2025-10-13 15:02:55,667 | INFO     | [monitor] control thread has ended
[2025-10-13 11:03:00] 2025-10-13 15:03:00,023 | INFO     | all workflow threads have been joined
[2025-10-13 11:03:00] 2025-10-13 15:03:00,024 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:03:00] 2025-10-13 15:03:00,024 | INFO     | traces error code: 0
[2025-10-13 11:03:00] 2025-10-13 15:03:00,024 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:03:00] 2025-10-13 15:03:00,214 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:03:00] 2025-10-13 15:03:00,217 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:03:00] 2025-10-13 15:03:00,219 [wrapper] pilotpid: 500280
[2025-10-13 11:03:00] 2025-10-13 15:03:00,222 [wrapper] Pilot exit status: 0
[2025-10-13 11:03:00] 2025-10-13 15:03:00,232 [wrapper] pandaids: 6839989445
[2025-10-13 11:03:00] 2025-10-13 15:03:00,311 [wrapper] cleanup supervisor_pilot  896721 500281
[2025-10-13 11:03:00] 2025-10-13 15:03:00,314 [wrapper] Test setup, not cleaning
[2025-10-13 11:03:00] 2025-10-13 15:03:00,317 [wrapper] apfmon messages muted
[2025-10-13 11:03:00] 2025-10-13 15:03:00,320 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:03:00] 2025-10-13 15:03:00,322 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:03:00]  *** Error codes and diagnostics ***
[2025-10-13 11:03:00]     "exeErrorCode": 0,
[2025-10-13 11:03:00]     "exeErrorDiag": "",
[2025-10-13 11:03:00]     "pilotErrorCode": 0,
[2025-10-13 11:03:00]     "pilotErrorDiag": "",
[2025-10-13 11:03:00]  *** Listing of results directory ***
[2025-10-13 11:03:00] total 411592
[2025-10-13 11:03:00] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 08:35 pilot3.tar.gz
[2025-10-13 11:03:00] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 08:53 queuedata.json
[2025-10-13 11:03:00] -rwx------. 1 boincer umatlas     36292 Oct 12 08:53 runpilot2-wrapper.sh
[2025-10-13 11:03:00] -rw-r--r--. 1 boincer umatlas       100 Oct 13 08:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:03:00] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 08:40 run_atlas
[2025-10-13 11:03:00] -rw-r--r--. 1 boincer umatlas       105 Oct 13 08:40 job.xml
[2025-10-13 11:03:00] -rw-r--r--. 2 boincer umatlas 220908457 Oct 13 08:40 EVNT.46676267._003832.pool.root.1
[2025-10-13 11:03:00] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 08:40 start_atlas.sh
[2025-10-13 11:03:00] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 08:40 shared
[2025-10-13 11:03:00] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 08:40 input.tar.gz
[2025-10-13 11:03:00] -rw-r--r--. 1 boincer umatlas         0 Oct 13 08:40 boinc_lockfile
[2025-10-13 11:03:00] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 08:40 pandaJob.out
[2025-10-13 11:03:00] -rw-------. 1 boincer umatlas    972497 Oct 13 08:41 agis_schedconf.cvmfs.json
[2025-10-13 11:03:00] -rw-------. 1 boincer umatlas   1560580 Oct 13 08:41 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:03:00] drwx------. 5 boincer umatlas      4096 Oct 13 08:41 pilot3
[2025-10-13 11:03:00] -rw-------. 1 boincer umatlas 193661886 Oct 13 11:01 HITS.46676269._078818.pool.root.1
[2025-10-13 11:03:00] -rw-r--r--. 1 boincer umatlas       530 Oct 13 11:01 boinc_task_state.xml
[2025-10-13 11:03:00] -rw-r--r--. 1 boincer umatlas      6857 Oct 13 11:01 init_data.xml
[2025-10-13 11:03:00] -rw-------. 1 boincer umatlas      1039 Oct 13 11:01 memory_monitor_summary.json
[2025-10-13 11:03:00] -rw-------. 1 boincer umatlas    393296 Oct 13 11:01 log.46676269._078818.job.log.tgz.1
[2025-10-13 11:03:00] -rw-------. 1 boincer umatlas      7825 Oct 13 11:02 heartbeat.json
[2025-10-13 11:03:00] -rw-------. 1 boincer umatlas        95 Oct 13 11:02 pilot_heartbeat.json
[2025-10-13 11:03:00] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 11:02 boinc_mmap_file
[2025-10-13 11:03:00] -rw-r--r--. 1 boincer umatlas        27 Oct 13 11:02 wrapper_checkpoint.txt
[2025-10-13 11:03:00] -rw-------. 1 boincer umatlas      4823 Oct 13 11:03 pilotlog.txt
[2025-10-13 11:03:00] -rw-------. 1 boincer umatlas   1107422 Oct 13 11:03 log.46676269._078818.job.log.1
[2025-10-13 11:03:00] -rw-------. 1 boincer umatlas       357 Oct 13 11:03 output.list
[2025-10-13 11:03:00] -rw-r--r--. 1 boincer umatlas       620 Oct 13 11:03 runtime_log
[2025-10-13 11:03:00] -rw-------. 1 boincer umatlas   1515520 Oct 13 11:03 result.tar.gz
[2025-10-13 11:03:00] -rw-r--r--. 1 boincer umatlas      8708 Oct 13 11:03 runtime_log.err
[2025-10-13 11:03:00] -rw-------. 1 boincer umatlas       653 Oct 13 11:03 nVeKDmMlAS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmJwTMDmYzsaon.diag
[2025-10-13 11:03:00] -rw-r--r--. 1 boincer umatlas     20982 Oct 13 11:03 stderr.txt
[2025-10-13 11:03:00] HITS file was successfully produced:
[2025-10-13 11:03:00] -rw-------. 1 boincer umatlas 193661886 Oct 13 11:01 shared/HITS.pool.root.1
[2025-10-13 11:03:00]  *** Contents of shared directory: ***
[2025-10-13 11:03:00] total 406920
[2025-10-13 11:03:00] -rw-r--r--. 2 boincer umatlas 220908457 Oct 13 08:40 ATLAS.root_0
[2025-10-13 11:03:00] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 08:40 start_atlas.sh
[2025-10-13 11:03:00] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 08:40 input.tar.gz
[2025-10-13 11:03:00] -rw-------. 1 boincer umatlas 193661886 Oct 13 11:01 HITS.pool.root.1
[2025-10-13 11:03:00] -rw-------. 1 boincer umatlas   1515520 Oct 13 11:03 result.tar.gz
11:03:01 (494789): run_atlas exited; CPU time 45962.217704
11:03:01 (494789): called boinc_finish(0)

</stderr_txt>
]]>

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