Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
19:54:24 (2124324): wrapper (7.7.26015): starting
19:54:24 (2124324): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 19:54:24] Arguments: --nthreads 8
[2025-10-13 19:54:24] Threads: 8
[2025-10-13 19:54:24] Checking for CVMFS
[2025-10-13 19:54:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 19:54:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 19:54:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 19:54:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 19:54:25] 2.11.5.0 1942209 140 58056 151668 3 188 2757985 4194305 918 130560 0 442928 99.995 5477 633 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-10-13 19:54:25] CVMFS is ok
[2025-10-13 19:54:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 19:54:25] Checking for apptainer binary...
[2025-10-13 19:54:25] apptainer is not installed, using version from CVMFS
[2025-10-13 19:54:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 19:54:25] mikemint-desktop
[2025-10-13 19:54:25] apptainer works
[2025-10-13 19:54:25] Set ATHENA_PROC_NUMBER=8
[2025-10-13 19:54:25] Set ATHENA_CORE_NUMBER=8
[2025-10-13 19:54:25] Starting ATLAS job with PandaID=6829084201
[2025-10-13 19:54:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/35 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:01:51]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:01:51] 2025-10-13 19:00:48,579 | INFO     | summary of transferred files:
[2025-10-13 21:01:51] 2025-10-13 19:00:48,579 | INFO     |  -- lfn=log.46376905._050035.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 21:01:51] 2025-10-13 19:00:48,579 | INFO     | stage-out finished correctly
[2025-10-13 21:01:51] 2025-10-13 19:00:48,722 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 21:01:51] 2025-10-13 19:00:49,457 | INFO     | PID=2128889 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 21:01:51] 2025-10-13 19:00:49,457 | INFO     | .. there are 6 such processes running
[2025-10-13 21:01:51] 2025-10-13 19:00:50,457 | INFO     | time since job start (3970s) is within the limit (172800.0s)
[2025-10-13 21:01:51] 2025-10-13 19:00:51,025 | INFO     | job 6829084201 has state=finished
[2025-10-13 21:01:51] 2025-10-13 19:00:51,025 | INFO     | preparing for final server update for job 6829084201 in state='finished'
[2025-10-13 21:01:51] 2025-10-13 19:00:51,026 | INFO     | this job has now completed (state=finished)
[2025-10-13 21:01:51] 2025-10-13 19:00:51,026 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 21:01:51] 2025-10-13 19:00:51,026 | INFO     | log transfer has been attempted: DONE
[2025-10-13 21:01:51] 2025-10-13 19:00:51,026 | INFO     | job 6829084201 has finished - writing final server update
[2025-10-13 21:01:51] 2025-10-13 19:00:51,026 | INFO     | total number of processed events: 400 (read)
[2025-10-13 21:01:51] 2025-10-13 19:00:51,029 | INFO     | executing command: lscpu
[2025-10-13 21:01:51] 2025-10-13 19:00:51,130 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 21:01:51] 2025-10-13 19:00:52,463 | INFO     | time since job start (3972s) is within the limit (172800.0s)
[2025-10-13 21:01:51] 2025-10-13 19:00:53,930 | WARNING  | process 2136252 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 21:01:51] 2025-10-13 19:00:53,931 | INFO     | using path: /var/lib/boinc-client/slots/35/PanDA_Pilot-6829084201/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 21:01:51] 2025-10-13 19:00:53,932 | INFO     | using path: /var/lib/boinc-client/slots/35/PanDA_Pilot-6829084201/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 21:01:51] 2025-10-13 19:00:53,932 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-13 21:01:51] 2025-10-13 19:00:53,932 | WARNING  | maxPSS not found in memory monitor output
[2025-10-13 21:01:51] 2025-10-13 19:00:53,933 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3378873 B
[2025-10-13 21:01:51] 2025-10-13 19:00:53,933 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15552 B
[2025-10-13 21:01:51] 2025-10-13 19:00:53,933 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/35
[2025-10-13 21:01:51] 2025-10-13 19:00:54,465 | INFO     | time since job start (3974s) is within the limit (172800.0s)
[2025-10-13 21:01:51] 2025-10-13 19:00:55,570 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 21:01:51] 2025-10-13 19:00:55,599 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2442.0861484375
[2025-10-13 21:01:51] 2025-10-13 19:00:55,600 | INFO     | sufficient remaining disk space (202023895040 B)
[2025-10-13 21:01:51] 2025-10-13 19:00:55,601 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-13 21:01:51] 2025-10-13 19:00:55,602 | INFO     | size of work directory /var/lib/boinc-client/slots/35/PanDA_Pilot-6829084201: 3671485 B (within 2537553920 B limit)
[2025-10-13 21:01:51] 2025-10-13 19:00:55,602 | INFO     | pfn file=/var/lib/boinc-client/slots/35/PanDA_Pilot-6829084201/HITS.46376905._050035.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-13 21:01:51] 2025-10-13 19:00:55,602 | INFO     | total size of present files: 0 B (workdir size: 3671485 B)
[2025-10-13 21:01:51] 2025-10-13 19:00:55,603 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/35/PanDA_Pilot-6829084201/HITS.46376905._050035.pool.root.1 since it does not exist
[2025-10-13 21:01:51] 2025-10-13 19:00:55,633 | INFO     | using path: /var/lib/boinc-client/slots/35/PanDA_Pilot-6829084201/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 21:01:51] 2025-10-13 19:00:55,634 | INFO     | extracted standard info from prmon json
[2025-10-13 21:01:51] 2025-10-13 19:00:55,634 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 21:01:51] 2025-10-13 19:00:55,634 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 21:01:51] 2025-10-13 19:00:55,635 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 21:01:51] 2025-10-13 19:00:55,635 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 21:01:51] 2025-10-13 19:00:55,637 | INFO     | fitting pss+swap vs Time
[2025-10-13 21:01:51] 2025-10-13 19:00:55,637 | INFO     | sum of square deviations: 60482994.5
[2025-10-13 21:01:51] 2025-10-13 19:00:55,638 | INFO     | sum of deviations: -1470984865.9999998
[2025-10-13 21:01:51] 2025-10-13 19:00:55,638 | INFO     | mean x: 1760380149.5
[2025-10-13 21:01:51] 2025-10-13 19:00:55,638 | INFO     | mean y: 2505465.103448276
[2025-10-13 21:01:51] 2025-10-13 19:00:55,638 | INFO     | -- intersect: 42816069504.51814
[2025-10-13 21:01:51] 2025-10-13 19:00:55,638 | INFO     | intersect: 42816069504.51814
[2025-10-13 21:01:51] 2025-10-13 19:00:55,639 | INFO     | chi2: 0.024529378832274993
[2025-10-13 21:01:51] 2025-10-13 19:00:55,639 | INFO     | -- intersect: 42816069504.51814
[2025-10-13 21:01:51] 2025-10-13 19:00:55,639 | INFO     | current memory leak: -24.32 B/s (using 58 data points, chi2=0.02)
[2025-10-13 21:01:51] 2025-10-13 19:00:55,639 | INFO     | could have reported an average CPU frequency of 2415 MHz (6 samples)
[2025-10-13 21:01:51] 2025-10-13 19:00:55,640 | INFO     | ..............................
[2025-10-13 21:01:51] 2025-10-13 19:00:55,640 | INFO     | . Timing measurements:
[2025-10-13 21:01:51] 2025-10-13 19:00:55,640 | INFO     | . get job = 0 s
[2025-10-13 21:01:51] 2025-10-13 19:00:55,640 | INFO     | . initial setup = 1 s
[2025-10-13 21:01:51] 2025-10-13 19:00:55,640 | INFO     | . payload setup = 5 s
[2025-10-13 21:01:51] 2025-10-13 19:00:55,640 | INFO     | . stage-in = 0 s
[2025-10-13 21:01:51] 2025-10-13 19:00:55,641 | INFO     | . payload execution = 3943 s
[2025-10-13 21:01:51] 2025-10-13 19:00:55,641 | INFO     | . stage-out = 0 s
[2025-10-13 21:01:51] 2025-10-13 19:00:55,641 | INFO     | . log creation = 0 s
[2025-10-13 21:01:51] 2025-10-13 19:00:55,641 | INFO     | ..............................
[2025-10-13 21:01:51] 2025-10-13 19:00:55,719 | INFO     | 
[2025-10-13 21:01:51] 2025-10-13 19:00:55,719 | INFO     | job summary report
[2025-10-13 21:01:51] 2025-10-13 19:00:55,719 | INFO     | --------------------------------------------------
[2025-10-13 21:01:51] 2025-10-13 19:00:55,720 | INFO     | PanDA job id: 6829084201
[2025-10-13 21:01:51] 2025-10-13 19:00:55,720 | INFO     | task id: 46376905
[2025-10-13 21:01:51] 2025-10-13 19:00:55,720 | INFO     | errors: (none)
[2025-10-13 21:01:51] 2025-10-13 19:00:55,720 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 21:01:51] 2025-10-13 19:00:55,720 | INFO     | pilot state: finished 
[2025-10-13 21:01:51] 2025-10-13 19:00:55,720 | INFO     | transexitcode: 0
[2025-10-13 21:01:51] 2025-10-13 19:00:55,720 | INFO     | exeerrorcode: 0
[2025-10-13 21:01:51] 2025-10-13 19:00:55,720 | INFO     | exeerrordiag: 
[2025-10-13 21:01:51] 2025-10-13 19:00:55,720 | INFO     | exitcode: 0
[2025-10-13 21:01:51] 2025-10-13 19:00:55,720 | INFO     | exitmsg: OK
[2025-10-13 21:01:51] 2025-10-13 19:00:55,720 | INFO     | cpuconsumptiontime: 28953 s
[2025-10-13 21:01:51] 2025-10-13 19:00:55,720 | INFO     | nevents: 400
[2025-10-13 21:01:51] 2025-10-13 19:00:55,720 | INFO     | neventsw: 0
[2025-10-13 21:01:51] 2025-10-13 19:00:55,720 | INFO     | pid: 2136252
[2025-10-13 21:01:51] 2025-10-13 19:00:55,720 | INFO     | pgrp: 2136252
[2025-10-13 21:01:51] 2025-10-13 19:00:55,720 | INFO     | corecount: 8
[2025-10-13 21:01:51] 2025-10-13 19:00:55,720 | INFO     | event service: False
[2025-10-13 21:01:51] 2025-10-13 19:00:55,721 | INFO     | sizes: {0: 2348824, 5: 2349086, 11: 2349142, 3952: 2375093, 3953: 2384162, 3954: 2384162, 3961: 2384512}
[2025-10-13 21:01:51] 2025-10-13 19:00:55,721 | INFO     | --------------------------------------------------
[2025-10-13 21:01:51] 2025-10-13 19:00:55,721 | INFO     | 
[2025-10-13 21:01:51] 2025-10-13 19:00:55,721 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/35
[2025-10-13 21:01:51] 2025-10-13 19:00:55,742 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 21:01:51] 2025-10-13 19:00:55,745 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 21:01:51] 2025-10-13 19:00:55,745 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 21:01:51] 2025-10-13 19:00:55,745 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 21:01:51] 2025-10-13 19:00:55,745 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 21:01:51] 2025-10-13 19:00:55,745 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 21:01:51] 2025-10-13 19:00:55,745 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 21:01:51] 2025-10-13 19:00:55,745 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 21:01:51] 2025-10-13 19:00:55,746 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 21:01:51] 2025-10-13 19:00:55,746 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 21:01:51] 2025-10-13 19:00:55,746 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 21:01:51] 2025-10-13 19:00:55,746 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 21:01:51] 2025-10-13 19:00:55,746 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 21:01:51] 2025-10-13 19:00:55,746 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 21:01:51] 2025-10-13 19:00:55,746 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 21:01:51] 2025-10-13 19:00:55,746 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 21:01:51] 2025-10-13 19:00:55,746 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 21:01:51] 2025-10-13 19:00:55,746 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 21:01:51] 2025-10-13 19:00:55,746 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 21:01:51] 2025-10-13 19:00:55,746 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 21:01:51] 2025-10-13 19:00:55,746 | INFO     | job 6829084201 has completed (purged errors)
[2025-10-13 21:01:51] 2025-10-13 19:00:55,747 | INFO     | overall cleanup function is called
[2025-10-13 21:01:51] 2025-10-13 19:00:56,061 | INFO     | number of running child processes to parent process 2136252: 1
[2025-10-13 21:01:51] 2025-10-13 19:00:56,061 | INFO     | maximum number of monitored processes: 6
[2025-10-13 21:01:51] 2025-10-13 19:00:56,061 | INFO     | aborting job monitoring since job object (job id=6829084201) has expired
[2025-10-13 21:01:51] 2025-10-13 19:00:56,753 | INFO     | --- collectZombieJob: --- 10, [2136252]
[2025-10-13 21:01:51] 2025-10-13 19:00:56,753 | INFO     | zombie collector waiting for pid 2136252
[2025-10-13 21:01:51] 2025-10-13 19:00:56,753 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 21:01:51] 2025-10-13 19:00:56,753 | INFO     | collected zombie processes
[2025-10-13 21:01:51] 2025-10-13 19:00:56,753 | INFO     | will attempt to kill all subprocesses of pid=2136252
[2025-10-13 21:01:51] 2025-10-13 19:00:57,078 | INFO     | process IDs to be killed: [2136252] (in reverse order)
[2025-10-13 21:01:51] 2025-10-13 19:00:57,190 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 21:01:51] 2025-10-13 19:00:57,191 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 21:01:51] 2025-10-13 19:00:57,204 | INFO     | did not find any defunct processes belonging to 2136252
[2025-10-13 21:01:51] 2025-10-13 19:00:57,214 | INFO     | did not find any defunct processes belonging to 2136252
[2025-10-13 21:01:51] 2025-10-13 19:00:57,215 | INFO     | ready for new job
[2025-10-13 21:01:51] 2025-10-13 19:00:57,215 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 21:01:51] 2025-10-13 19:00:57,216 | INFO     | ***************************************
[2025-10-13 21:01:51] 2025-10-13 19:00:57,216 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 21:01:51] 2025-10-13 19:00:57,216 | INFO     | ***************************************
[2025-10-13 21:01:51] 2025-10-13 19:00:57,216 | INFO     | 
[2025-10-13 21:01:51] 2025-10-13 19:00:57,226 | INFO     | architecture information:
[2025-10-13 21:01:51] 2025-10-13 19:00:57,226 | INFO     | executing command: cat /etc/os-release
[2025-10-13 21:01:51] 2025-10-13 19:00:57,244 | INFO     | cat /etc/os-release:
[2025-10-13 21:01:51] NAME="CentOS Linux"
[2025-10-13 21:01:51] VERSION="7 (Core)"
[2025-10-13 21:01:51] ID="centos"
[2025-10-13 21:01:51] ID_LIKE="rhel fedora"
[2025-10-13 21:01:51] VERSION_ID="7"
[2025-10-13 21:01:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 21:01:51] ANSI_COLOR="0;31"
[2025-10-13 21:01:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 21:01:51] HOME_URL="https://www.centos.org/"
[2025-10-13 21:01:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 21:01:51] 
[2025-10-13 21:01:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 21:01:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 21:01:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 21:01:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 21:01:51] 
[2025-10-13 21:01:51] 2025-10-13 19:00:57,244 | INFO     | ***************************************
[2025-10-13 21:01:51] 2025-10-13 19:00:57,747 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/35
[2025-10-13 21:01:51] 2025-10-13 19:00:57,766 | INFO     | sufficient remaining disk space (202028089344 B)
[2025-10-13 21:01:51] 2025-10-13 19:00:57,766 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 21:01:51] 2025-10-13 19:00:57,766 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 21:01:51] 2025-10-13 19:00:57,766 | INFO     | update_server=False
[2025-10-13 21:01:51] 2025-10-13 19:00:57,767 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 21:01:51] 2025-10-13 19:00:57,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:01:51] 2025-10-13 19:00:57,767 | INFO     | aborting loop
[2025-10-13 21:01:51] 2025-10-13 19:00:58,337 | INFO     | all payload control threads have been joined
[2025-10-13 21:01:51] 2025-10-13 19:00:58,521 | INFO     | all job control threads have been joined
[2025-10-13 21:01:51] 2025-10-13 19:00:58,757 | INFO     | all data control threads have been joined
[2025-10-13 21:01:51] 2025-10-13 19:00:58,769 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:01:51] 2025-10-13 19:00:58,769 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:01:51] 2025-10-13 19:00:58,969 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:01:51] 2025-10-13 19:00:59,169 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:01:51] 2025-10-13 19:00:59,253 | INFO     | [job] validate thread has finished
[2025-10-13 21:01:51] 2025-10-13 19:00:59,305 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:01:51] 2025-10-13 19:00:59,313 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:01:51] 2025-10-13 19:00:59,317 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:01:51] 2025-10-13 19:00:59,342 | INFO     | [payload] control thread has finished
[2025-10-13 21:01:51] 2025-10-13 19:00:59,469 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:01:51] 2025-10-13 19:00:59,525 | INFO     | [job] control thread has finished
[2025-10-13 21:01:51] 2025-10-13 19:00:59,589 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:01:51] 2025-10-13 19:00:59,761 | INFO     | [data] control thread has finished
[2025-10-13 21:01:51] 2025-10-13 19:01:00,173 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:01:51] 2025-10-13 19:01:00,725 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:01:51] 2025-10-13 19:01:01,174 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:01:51] 2025-10-13 19:01:01,729 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:01:51] 2025-10-13 19:01:03,309 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:01:51] 2025-10-13 19:01:08,441 | INFO     | job.realtimelogging is not enabled
[2025-10-13 21:01:51] 2025-10-13 19:01:09,446 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:01:51] 2025-10-13 19:01:27,926 | INFO     | PID=2128889 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 21:01:51] 2025-10-13 19:01:27,927 | INFO     | .. there are 6 such processes running
[2025-10-13 21:01:51] 2025-10-13 19:01:27,927 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:01:51] 2025-10-13 19:01:27,927 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:01:51] 2025-10-13 19:01:27,927 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:01:51] 2025-10-13 19:01:46,089 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:01:51] 2025-10-13 19:01:46,186 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140256290432832)>', '<ExcThread(monitor, started 140255697032960)>']
[2025-10-13 21:01:51] 2025-10-13 19:01:47,009 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:01:51] 2025-10-13 19:01:47,009 | INFO     | [monitor] control thread has ended
[2025-10-13 21:01:51] 2025-10-13 19:01:51,193 | INFO     | all workflow threads have been joined
[2025-10-13 21:01:51] 2025-10-13 19:01:51,193 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:01:51] 2025-10-13 19:01:51,193 | INFO     | traces error code: 0
[2025-10-13 21:01:51] 2025-10-13 19:01:51,194 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:01:51] 2025-10-13 19:01:51,313 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:01:51] 2025-10-13 19:01:51,316 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:01:51] 2025-10-13 19:01:51,319 [wrapper] pilotpid: 2128889
[2025-10-13 21:01:51] 2025-10-13 19:01:51,321 [wrapper] Pilot exit status: 0
[2025-10-13 21:01:51] 2025-10-13 19:01:51,331 [wrapper] pandaids: 6829084201
[2025-10-13 21:01:51] 2025-10-13 19:01:51,431 [wrapper] cleanup supervisor_pilot 2264408 2128890
[2025-10-13 21:01:51] 2025-10-13 19:01:51,434 [wrapper] Test setup, not cleaning
[2025-10-13 21:01:51] 2025-10-13 19:01:51,437 [wrapper] apfmon messages muted
[2025-10-13 21:01:51] 2025-10-13 19:01:51,440 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:01:51] 2025-10-13 19:01:51,442 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:01:51]  *** Error codes and diagnostics ***
[2025-10-13 21:01:51]     "exeErrorCode": 0,
[2025-10-13 21:01:51]     "exeErrorDiag": "",
[2025-10-13 21:01:51]     "pilotErrorCode": 0,
[2025-10-13 21:01:51]     "pilotErrorDiag": "",
[2025-10-13 21:01:51]  *** Listing of results directory ***
[2025-10-13 21:01:51] insgesamt 388924
[2025-10-13 21:01:51] -rw-r--r-- 1 boinc boinc    557409 Okt 13 14:18 pilot3.tar.gz
[2025-10-13 21:01:51] -rw-r--r-- 1 boinc boinc      5112 Okt 13 14:19 queuedata.json
[2025-10-13 21:01:51] -rwx------ 1 boinc boinc     36292 Okt 13 14:19 runpilot2-wrapper.sh
[2025-10-13 21:01:51] -rw-r--r-- 1 boinc boinc       100 Okt 13 19:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:01:51] -rwxr-xr-x 1 boinc boinc      7986 Okt 13 19:54 run_atlas
[2025-10-13 21:01:51] -rw-r--r-- 1 boinc boinc       105 Okt 13 19:54 job.xml
[2025-10-13 21:01:51] -rw-r--r-- 1 boinc boinc      6667 Okt 13 19:54 init_data.xml
[2025-10-13 21:01:51] -rw-r--r-- 2 boinc boinc 213744105 Okt 13 19:54 EVNT.46376901._001766.pool.root.1
[2025-10-13 21:01:51] -rw-r--r-- 2 boinc boinc     15120 Okt 13 19:54 start_atlas.sh
[2025-10-13 21:01:51] drwxrwx--x 2 boinc boinc      4096 Okt 13 19:54 shared
[2025-10-13 21:01:51] -rw-r--r-- 2 boinc boinc    569674 Okt 13 19:54 input.tar.gz
[2025-10-13 21:01:51] -rw-r--r-- 1 boinc boinc         0 Okt 13 19:54 boinc_lockfile
[2025-10-13 21:01:51] -rw-r--r-- 1 boinc boinc      2519 Okt 13 19:54 pandaJob.out
[2025-10-13 21:01:51] -rw------- 1 boinc boinc    972791 Okt 13 19:54 agis_schedconf.cvmfs.json
[2025-10-13 21:01:51] -rw------- 1 boinc boinc   1560580 Okt 13 19:54 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:01:51] drwx------ 5 boinc boinc      4096 Okt 13 19:54 pilot3
[2025-10-13 21:01:51] -rw------- 1 boinc boinc 178785200 Okt 13 21:00 HITS.46376905._050035.pool.root.1
[2025-10-13 21:01:51] -rw-r--r-- 1 boinc boinc       529 Okt 13 21:00 boinc_task_state.xml
[2025-10-13 21:01:51] -rw------- 1 boinc boinc      1019 Okt 13 21:00 memory_monitor_summary.json
[2025-10-13 21:01:51] -rw------- 1 boinc boinc    316599 Okt 13 21:00 log.46376905._050035.job.log.tgz.1
[2025-10-13 21:01:51] -rw------- 1 boinc boinc      7743 Okt 13 21:00 heartbeat.json
[2025-10-13 21:01:51] -rw------- 1 boinc boinc        95 Okt 13 21:01 pilot_heartbeat.json
[2025-10-13 21:01:51] -rw-r--r-- 1 boinc boinc      8192 Okt 13 21:01 boinc_mmap_file
[2025-10-13 21:01:51] -rw-r--r-- 1 boinc boinc        27 Okt 13 21:01 wrapper_checkpoint.txt
[2025-10-13 21:01:51] -rw------- 1 boinc boinc      4904 Okt 13 21:01 pilotlog.txt
[2025-10-13 21:01:51] -rw------- 1 boinc boinc    594724 Okt 13 21:01 log.46376905._050035.job.log.1
[2025-10-13 21:01:51] -rw------- 1 boinc boinc       357 Okt 13 21:01 output.list
[2025-10-13 21:01:51] -rw-r--r-- 1 boinc boinc       620 Okt 13 21:01 runtime_log
[2025-10-13 21:01:51] -rw------- 1 boinc boinc    931840 Okt 13 21:01 result.tar.gz
[2025-10-13 21:01:51] -rw-r--r-- 1 boinc boinc      8856 Okt 13 21:01 runtime_log.err
[2025-10-13 21:01:51] -rw------- 1 boinc boinc       664 Okt 13 21:01 MY9MDmyhWS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmCkVMDm7xeaTn.diag
[2025-10-13 21:01:51] -rw-r--r-- 1 boinc boinc     22199 Okt 13 21:01 stderr.txt
[2025-10-13 21:01:51] HITS file was successfully produced:
[2025-10-13 21:01:51] -rw------- 1 boinc boinc 178785200 Okt 13 21:00 shared/HITS.pool.root.1
[2025-10-13 21:01:51]  *** Contents of shared directory: ***
[2025-10-13 21:01:51] insgesamt 384828
[2025-10-13 21:01:51] -rw-r--r-- 2 boinc boinc 213744105 Okt 13 19:54 ATLAS.root_0
[2025-10-13 21:01:51] -rw-r--r-- 2 boinc boinc     15120 Okt 13 19:54 start_atlas.sh
[2025-10-13 21:01:51] -rw-r--r-- 2 boinc boinc    569674 Okt 13 19:54 input.tar.gz
[2025-10-13 21:01:51] -rw------- 1 boinc boinc 178785200 Okt 13 21:00 HITS.pool.root.1
[2025-10-13 21:01:51] -rw------- 1 boinc boinc    931840 Okt 13 21:01 result.tar.gz
21:01:53 (2124324): run_atlas exited; CPU time 29095.724587
21:01:53 (2124324): called boinc_finish(0)

</stderr_txt>
]]>

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