Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:28:28 (6015): wrapper (7.7.26015): starting
08:28:28 (6015): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 08:28:28] Arguments: --nthreads 8
[2025-10-13 08:28:28] Threads: 8
[2025-10-13 08:28:28] Checking for CVMFS
[2025-10-13 08:28:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 08:28:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 08:28:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 08:28:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 08:28:29] 2.11.2.0 24877 54323 127816 151661 2 39 14512882 18432000 1833 130560 0 50682500 99.977 2314842 37574 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 08:28:29] CVMFS is ok
[2025-10-13 08:28:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 08:28:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 08:28:29] Further information can be found at the LHC@home message board.
[2025-10-13 08:28:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 08:28:29] Checking for apptainer binary...
[2025-10-13 08:28:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 08:28:29] Running /usr/bin/apptainer --version
[2025-10-13 08:28:29] apptainer version 1.3.2-1.el7
[2025-10-13 08:28:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 08:28:29] c-206-3.aglt2.org
[2025-10-13 08:28:29] apptainer works
[2025-10-13 08:28:29] Set ATHENA_PROC_NUMBER=8
[2025-10-13 08:28:29] Set ATHENA_CORE_NUMBER=8
[2025-10-13 08:28:30] Starting ATLAS job with PandaID=6841124468
[2025-10-13 08:28:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:19:24]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:19:24] 2025-10-13 15:18:50,950 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:19:24] 2025-10-13 15:18:50,989 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 11:19:24] 2025-10-13 15:18:50,993 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2461.2916666666665
[2025-10-13 11:19:24] 2025-10-13 15:18:50,995 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6841124468/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 11:19:24] 2025-10-13 15:18:50,996 | INFO     | extracted standard info from prmon json
[2025-10-13 11:19:24] 2025-10-13 15:18:50,996 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 11:19:24] 2025-10-13 15:18:50,996 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 11:19:24] 2025-10-13 15:18:50,996 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:19:24] 2025-10-13 15:18:50,996 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:19:24] 2025-10-13 15:18:50,999 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:19:24] 2025-10-13 15:18:50,999 | INFO     | sum of square deviations: 1444149868.0
[2025-10-13 11:19:24] 2025-10-13 15:18:51,000 | INFO     | sum of deviations: -12085420527.999996
[2025-10-13 11:19:24] 2025-10-13 15:18:51,000 | INFO     | mean x: 1760363609.0
[2025-10-13 11:19:24] 2025-10-13 15:18:51,000 | INFO     | mean y: 2522350.502994012
[2025-10-13 11:19:24] 2025-10-13 15:18:51,000 | INFO     | -- intersect: 14734189034.388159
[2025-10-13 11:19:24] 2025-10-13 15:18:51,000 | INFO     | intersect: 14734189034.388159
[2025-10-13 11:19:24] 2025-10-13 15:18:51,001 | INFO     | chi2: 1.5710144415303406
[2025-10-13 11:19:24] 2025-10-13 15:18:51,001 | INFO     | sum of square deviations: 1318277740.5
[2025-10-13 11:19:24] 2025-10-13 15:18:51,002 | INFO     | sum of deviations: -11369588944.0
[2025-10-13 11:19:24] 2025-10-13 15:18:51,002 | INFO     | mean x: 1760363456.5
[2025-10-13 11:19:24] 2025-10-13 15:18:51,002 | INFO     | mean y: 2523217.592592593
[2025-10-13 11:19:24] 2025-10-13 15:18:51,002 | INFO     | -- intersect: 15184914816.538069
[2025-10-13 11:19:24] 2025-10-13 15:18:51,002 | INFO     | intersect: 15184914816.538069
[2025-10-13 11:19:24] 2025-10-13 15:18:51,002 | INFO     | chi2: 1.5699033422151614
[2025-10-13 11:19:24] 2025-10-13 15:18:51,003 | INFO     | current chi2=1.5699033422151614 (change=0.07072495871501622 %)
[2025-10-13 11:19:24] 2025-10-13 15:18:51,003 | INFO     | right removable region: 161
[2025-10-13 11:19:24] 2025-10-13 15:18:51,003 | INFO     | sum of square deviations: 1318277740.5
[2025-10-13 11:19:24] 2025-10-13 15:18:51,004 | INFO     | sum of deviations: -36214606270.0
[2025-10-13 11:19:24] 2025-10-13 15:18:51,004 | INFO     | mean x: 1760363761.5
[2025-10-13 11:19:24] 2025-10-13 15:18:51,004 | INFO     | mean y: 2551174.6172839506
[2025-10-13 11:19:24] 2025-10-13 15:18:51,004 | INFO     | -- intersect: 48361769081.55022
[2025-10-13 11:19:24] 2025-10-13 15:18:51,004 | INFO     | intersect: 48361769081.55022
[2025-10-13 11:19:24] 2025-10-13 15:18:51,004 | INFO     | chi2: 0.1706154704214119
[2025-10-13 11:19:24] 2025-10-13 15:18:51,004 | INFO     | current chi2=0.1706154704214119 (change=89.13978981280314 %)
[2025-10-13 11:19:24] 2025-10-13 15:18:51,005 | INFO     | sum of square deviations: 1199940638.0
[2025-10-13 11:19:24] 2025-10-13 15:18:51,005 | INFO     | sum of deviations: -34004601401.999973
[2025-10-13 11:19:24] 2025-10-13 15:18:51,005 | INFO     | mean x: 1760363914.0
[2025-10-13 11:19:24] 2025-10-13 15:18:51,006 | INFO     | mean y: 2548273.6624203823
[2025-10-13 11:19:24] 2025-10-13 15:18:51,006 | INFO     | -- intersect: 49888743742.30406
[2025-10-13 11:19:24] 2025-10-13 15:18:51,006 | INFO     | intersect: 49888743742.30406
[2025-10-13 11:19:24] 2025-10-13 15:18:51,006 | INFO     | chi2: 0.15921394667695993
[2025-10-13 11:19:24] 2025-10-13 15:18:51,006 | INFO     | current chi2=0.15921394667695993 (change=6.682584947479124 %)
[2025-10-13 11:19:24] 2025-10-13 15:18:51,006 | INFO     | left removable region: 20
[2025-10-13 11:19:24] 2025-10-13 15:18:51,006 | INFO     | sum of square deviations: 869188390.0
[2025-10-13 11:19:24] 2025-10-13 15:18:51,007 | INFO     | sum of deviations: -23448611731.0
[2025-10-13 11:19:24] 2025-10-13 15:18:51,007 | INFO     | mean x: 1760364036.0
[2025-10-13 11:19:24] 2025-10-13 15:18:51,007 | INFO     | mean y: 2536521.631205674
[2025-10-13 11:19:24] 2025-10-13 15:18:51,007 | INFO     | -- intersect: 47492923255.144875
[2025-10-13 11:19:24] 2025-10-13 15:18:51,007 | INFO     | intersect: 47492923255.144875
[2025-10-13 11:19:24] 2025-10-13 15:18:51,008 | INFO     | chi2: 0.14486166646857393
[2025-10-13 11:19:24] 2025-10-13 15:18:51,008 | INFO     | -- intersect: 47492923255.144875
[2025-10-13 11:19:24] 2025-10-13 15:18:51,008 | INFO     | current memory leak: -26.98 B/s (using 141 data points, chi2=0.14)
[2025-10-13 11:19:24] 2025-10-13 15:18:51,008 | INFO     | could have reported an average CPU frequency of 2513 MHz (9 samples)
[2025-10-13 11:19:24] 2025-10-13 15:18:51,008 | INFO     | ..............................
[2025-10-13 11:19:24] 2025-10-13 15:18:51,008 | INFO     | . Timing measurements:
[2025-10-13 11:19:24] 2025-10-13 15:18:51,009 | INFO     | . get job = 0 s
[2025-10-13 11:19:24] 2025-10-13 15:18:51,009 | INFO     | . initial setup = 2 s
[2025-10-13 11:19:24] 2025-10-13 15:18:51,009 | INFO     | . payload setup = 5 s
[2025-10-13 11:19:24] 2025-10-13 15:18:51,009 | INFO     | . stage-in = 0 s
[2025-10-13 11:19:24] 2025-10-13 15:18:51,009 | INFO     | . payload execution = 10175 s
[2025-10-13 11:19:24] 2025-10-13 15:18:51,009 | INFO     | . stage-out = 1 s
[2025-10-13 11:19:24] 2025-10-13 15:18:51,009 | INFO     | . log creation = 0 s
[2025-10-13 11:19:24] 2025-10-13 15:18:51,009 | INFO     | ..............................
[2025-10-13 11:19:24] 2025-10-13 15:18:51,313 | INFO     | 
[2025-10-13 11:19:24] 2025-10-13 15:18:51,313 | INFO     | job summary report
[2025-10-13 11:19:24] 2025-10-13 15:18:51,313 | INFO     | --------------------------------------------------
[2025-10-13 11:19:24] 2025-10-13 15:18:51,313 | INFO     | PanDA job id: 6841124468
[2025-10-13 11:19:24] 2025-10-13 15:18:51,314 | INFO     | task id: 46676269
[2025-10-13 11:19:24] 2025-10-13 15:18:51,314 | INFO     | errors: (none)
[2025-10-13 11:19:24] 2025-10-13 15:18:51,314 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:19:24] 2025-10-13 15:18:51,314 | INFO     | pilot state: finished 
[2025-10-13 11:19:24] 2025-10-13 15:18:51,314 | INFO     | transexitcode: 0
[2025-10-13 11:19:24] 2025-10-13 15:18:51,314 | INFO     | exeerrorcode: 0
[2025-10-13 11:19:24] 2025-10-13 15:18:51,315 | INFO     | exeerrordiag: 
[2025-10-13 11:19:24] 2025-10-13 15:18:51,315 | INFO     | exitcode: 0
[2025-10-13 11:19:24] 2025-10-13 15:18:51,315 | INFO     | exitmsg: OK
[2025-10-13 11:19:24] 2025-10-13 15:18:51,315 | INFO     | cpuconsumptiontime: 77152 s
[2025-10-13 11:19:24] 2025-10-13 15:18:51,315 | INFO     | nevents: 400
[2025-10-13 11:19:24] 2025-10-13 15:18:51,315 | INFO     | neventsw: 0
[2025-10-13 11:19:24] 2025-10-13 15:18:51,316 | INFO     | pid: 16566
[2025-10-13 11:19:24] 2025-10-13 15:18:51,316 | INFO     | pgrp: 16566
[2025-10-13 11:19:24] 2025-10-13 15:18:51,316 | INFO     | corecount: 8
[2025-10-13 11:19:24] 2025-10-13 15:18:51,316 | INFO     | event service: False
[2025-10-13 11:19:24] 2025-10-13 15:18:51,316 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 4: 2349175, 12: 2349203, 10184: 2377932, 10187: 2386930, 10189: 2386986, 10194: 2387244}
[2025-10-13 11:19:24] 2025-10-13 15:18:51,316 | INFO     | --------------------------------------------------
[2025-10-13 11:19:24] 2025-10-13 15:18:51,317 | INFO     | 
[2025-10-13 11:19:24] 2025-10-13 15:18:51,317 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 11:19:24] 2025-10-13 15:18:51,334 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:19:24] 2025-10-13 15:18:51,334 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:19:24] 2025-10-13 15:18:51,335 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:19:24] 2025-10-13 15:18:51,335 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:19:24] 2025-10-13 15:18:51,335 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:19:24] 2025-10-13 15:18:51,335 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:19:24] 2025-10-13 15:18:51,335 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:19:24] 2025-10-13 15:18:51,335 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:19:24] 2025-10-13 15:18:51,336 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:19:24] 2025-10-13 15:18:51,336 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:19:24] 2025-10-13 15:18:51,336 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:19:24] 2025-10-13 15:18:51,336 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:19:24] 2025-10-13 15:18:51,336 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:19:24] 2025-10-13 15:18:51,337 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:19:24] 2025-10-13 15:18:51,337 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:19:24] 2025-10-13 15:18:51,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:19:24] 2025-10-13 15:18:51,337 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:19:24] 2025-10-13 15:18:51,337 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:19:24] 2025-10-13 15:18:51,337 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:19:24] 2025-10-13 15:18:51,338 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:19:24] 2025-10-13 15:18:51,338 | INFO     | job 6841124468 has completed (purged errors)
[2025-10-13 11:19:24] 2025-10-13 15:18:51,338 | INFO     | overall cleanup function is called
[2025-10-13 11:19:24] 2025-10-13 15:18:52,345 | INFO     | --- collectZombieJob: --- 10, [16566]
[2025-10-13 11:19:24] 2025-10-13 15:18:52,345 | INFO     | zombie collector waiting for pid 16566
[2025-10-13 11:19:24] 2025-10-13 15:18:52,345 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:19:24] 2025-10-13 15:18:52,345 | INFO     | collected zombie processes
[2025-10-13 11:19:24] 2025-10-13 15:18:52,345 | INFO     | will attempt to kill all subprocesses of pid=16566
[2025-10-13 11:19:24] 2025-10-13 15:18:52,490 | INFO     | process IDs to be killed: [16566] (in reverse order)
[2025-10-13 11:19:24] 2025-10-13 15:18:52,549 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:19:24] 2025-10-13 15:18:52,549 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:19:24] 2025-10-13 15:18:52,555 | INFO     | did not find any defunct processes belonging to 16566
[2025-10-13 11:19:24] 2025-10-13 15:18:52,560 | INFO     | did not find any defunct processes belonging to 16566
[2025-10-13 11:19:24] 2025-10-13 15:18:52,560 | INFO     | ready for new job
[2025-10-13 11:19:24] 2025-10-13 15:18:52,561 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:19:24] 2025-10-13 15:18:52,562 | INFO     | ***************************************
[2025-10-13 11:19:24] 2025-10-13 15:18:52,563 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:19:24] 2025-10-13 15:18:52,563 | INFO     | ***************************************
[2025-10-13 11:19:24] 2025-10-13 15:18:52,563 | INFO     | 
[2025-10-13 11:19:24] 2025-10-13 15:18:52,564 | INFO     | architecture information:
[2025-10-13 11:19:24] 2025-10-13 15:18:52,565 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:19:24] 2025-10-13 15:18:52,577 | INFO     | cat /etc/os-release:
[2025-10-13 11:19:24] NAME="CentOS Linux"
[2025-10-13 11:19:24] VERSION="7 (Core)"
[2025-10-13 11:19:24] ID="centos"
[2025-10-13 11:19:24] ID_LIKE="rhel fedora"
[2025-10-13 11:19:24] VERSION_ID="7"
[2025-10-13 11:19:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:19:24] ANSI_COLOR="0;31"
[2025-10-13 11:19:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:19:24] HOME_URL="https://www.centos.org/"
[2025-10-13 11:19:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:19:24] 
[2025-10-13 11:19:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:19:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:19:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:19:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:19:24] 
[2025-10-13 11:19:24] 2025-10-13 15:18:52,578 | INFO     | ***************************************
[2025-10-13 11:19:24] 2025-10-13 15:18:53,080 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 11:19:24] 2025-10-13 15:18:53,098 | INFO     | sufficient remaining disk space (28223471616 B)
[2025-10-13 11:19:24] 2025-10-13 15:18:53,099 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:19:24] 2025-10-13 15:18:53,099 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:19:24] 2025-10-13 15:18:53,099 | INFO     | update_server=False
[2025-10-13 11:19:24] 2025-10-13 15:18:53,099 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:19:24] 2025-10-13 15:18:53,100 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:19:24] 2025-10-13 15:18:53,183 | INFO     | all data control threads have been joined
[2025-10-13 11:19:24] 2025-10-13 15:18:53,221 | INFO     | all payload control threads have been joined
[2025-10-13 11:19:24] 2025-10-13 15:18:53,453 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 11:19:24] 2025-10-13 15:18:53,453 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 11:19:24] 2025-10-13 15:18:53,454 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:19:24] 2025-10-13 15:18:53,454 | INFO     | will abort loop
[2025-10-13 11:19:24] 2025-10-13 15:18:54,088 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:19:24] 2025-10-13 15:18:54,104 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:19:24] 2025-10-13 15:18:54,105 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:19:24] 2025-10-13 15:18:54,148 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:19:24] 2025-10-13 15:18:54,187 | INFO     | [data] control thread has finished
[2025-10-13 11:19:24] 2025-10-13 15:18:54,215 | INFO     | all job control threads have been joined
[2025-10-13 11:19:24] 2025-10-13 15:18:54,226 | INFO     | [payload] control thread has finished
[2025-10-13 11:19:24] 2025-10-13 15:18:54,445 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:19:24] 2025-10-13 15:18:54,458 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:19:24] 2025-10-13 15:18:54,471 | INFO     | [job] validate thread has finished
[2025-10-13 11:19:24] 2025-10-13 15:18:54,794 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:19:24] 2025-10-13 15:18:54,799 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:19:24] 2025-10-13 15:18:54,800 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:19:24] 2025-10-13 15:18:54,807 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:19:24] 2025-10-13 15:18:55,110 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:19:24] 2025-10-13 15:18:55,220 | INFO     | [job] control thread has finished
[2025-10-13 11:19:24] 2025-10-13 15:18:56,093 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:19:24] 2025-10-13 15:18:56,184 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:19:24] 2025-10-13 15:18:56,544 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:19:24] 2025-10-13 15:19:00,189 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:19:24] 2025-10-13 15:19:01,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140088581326656)>', '<ExcThread(monitor, started 140087857764096)>']
[2025-10-13 11:19:24] 2025-10-13 15:19:06,796 | INFO     | all workflow threads have been joined
[2025-10-13 11:19:24] 2025-10-13 15:19:06,796 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:19:24] 2025-10-13 15:19:06,796 | INFO     | traces error code: 0
[2025-10-13 11:19:24] 2025-10-13 15:19:06,797 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:19:24] 2025-10-13 15:19:23,693 | INFO     | PID=9715 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 11:19:24] 2025-10-13 15:19:23,693 | INFO     | .. there are 3 such processes running
[2025-10-13 11:19:24] 2025-10-13 15:19:23,694 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:19:24] 2025-10-13 15:19:23,694 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:19:24] 2025-10-13 15:19:23,694 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:19:24] 2025-10-13 15:19:23,695 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:19:24] 2025-10-13 15:19:23,695 | INFO     | [monitor] control thread has ended
[2025-10-13 11:19:24] 2025-10-13 15:19:23,826 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:19:24] 2025-10-13 15:19:23,828 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:19:24] 2025-10-13 15:19:23,830 [wrapper] pilotpid: 9715
[2025-10-13 11:19:24] 2025-10-13 15:19:23,832 [wrapper] Pilot exit status: 0
[2025-10-13 11:19:24] 2025-10-13 15:19:23,846 [wrapper] pandaids: 6841124468
[2025-10-13 11:19:24] 2025-10-13 15:19:23,875 [wrapper] cleanup supervisor_pilot 26826 9716
[2025-10-13 11:19:24] 2025-10-13 15:19:23,877 [wrapper] Test setup, not cleaning
[2025-10-13 11:19:24] 2025-10-13 15:19:23,880 [wrapper] apfmon messages muted
[2025-10-13 11:19:24] 2025-10-13 15:19:23,882 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:19:24] 2025-10-13 15:19:23,884 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:19:24]  *** Error codes and diagnostics ***
[2025-10-13 11:19:24]     "exeErrorCode": 0,
[2025-10-13 11:19:24]     "exeErrorDiag": "",
[2025-10-13 11:19:24]     "pilotErrorCode": 0,
[2025-10-13 11:19:24]     "pilotErrorDiag": "",
[2025-10-13 11:19:24]  *** Listing of results directory ***
[2025-10-13 11:19:24] total 411596
[2025-10-13 11:19:24] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 21:18 pilot3.tar.gz
[2025-10-13 11:19:24] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 21:47 queuedata.json
[2025-10-13 11:19:24] -rwx------ 1 boincer umatlas     36292 Oct 12 21:48 runpilot2-wrapper.sh
[2025-10-13 11:19:24] -rw-r--r-- 1 boincer umatlas       100 Oct 13 08:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:19:24] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 08:28 run_atlas
[2025-10-13 11:19:24] -rw-r--r-- 1 boincer umatlas       105 Oct 13 08:28 job.xml
[2025-10-13 11:19:24] -rw-r--r-- 2 boincer umatlas 220479320 Oct 13 08:28 EVNT.46676267._004367.pool.root.1
[2025-10-13 11:19:24] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 08:28 start_atlas.sh
[2025-10-13 11:19:24] drwxrwx--x 2 boincer umatlas      4096 Oct 13 08:28 shared
[2025-10-13 11:19:24] -rw-r--r-- 2 boincer umatlas    569682 Oct 13 08:28 input.tar.gz
[2025-10-13 11:19:24] -rw-r--r-- 1 boincer umatlas         0 Oct 13 08:28 boinc_lockfile
[2025-10-13 11:19:24] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 08:28 pandaJob.out
[2025-10-13 11:19:24] -rw------- 1 boincer umatlas    972497 Oct 13 08:28 agis_schedconf.cvmfs.json
[2025-10-13 11:19:24] -rw------- 1 boincer umatlas   1560580 Oct 13 08:28 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:19:24] drwx------ 5 boincer umatlas      4096 Oct 13 08:28 pilot3
[2025-10-13 11:19:24] -rw-r--r-- 1 boincer umatlas      5950 Oct 13 11:13 init_data.xml
[2025-10-13 11:19:24] -rw------- 1 boincer umatlas 193396114 Oct 13 11:18 HITS.46676269._094376.pool.root.1
[2025-10-13 11:19:24] -rw-r--r-- 1 boincer umatlas       530 Oct 13 11:18 boinc_task_state.xml
[2025-10-13 11:19:24] -rw------- 1 boincer umatlas      1055 Oct 13 11:18 memory_monitor_summary.json
[2025-10-13 11:19:24] -rw------- 1 boincer umatlas    410734 Oct 13 11:18 log.46676269._094376.job.log.tgz.1
[2025-10-13 11:19:24] -rw------- 1 boincer umatlas      7859 Oct 13 11:18 heartbeat.json
[2025-10-13 11:19:24] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 11:18 boinc_mmap_file
[2025-10-13 11:19:24] -rw-r--r-- 1 boincer umatlas        28 Oct 13 11:18 wrapper_checkpoint.txt
[2025-10-13 11:19:24] -rw------- 1 boincer umatlas        95 Oct 13 11:19 pilot_heartbeat.json
[2025-10-13 11:19:24] -rw------- 1 boincer umatlas       819 Oct 13 11:19 pilotlog.txt
[2025-10-13 11:19:24] -rw------- 1 boincer umatlas   1439379 Oct 13 11:19 log.46676269._094376.job.log.1
[2025-10-13 11:19:24] -rw------- 1 boincer umatlas       357 Oct 13 11:19 output.list
[2025-10-13 11:19:24] -rw-r--r-- 1 boincer umatlas       620 Oct 13 11:19 runtime_log
[2025-10-13 11:19:24] -rw------- 1 boincer umatlas   1873920 Oct 13 11:19 result.tar.gz
[2025-10-13 11:19:24] -rw------- 1 boincer umatlas       660 Oct 13 11:19 wsGLDmnqMS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQPmNDm67moqm.diag
[2025-10-13 11:19:24] -rw-r--r-- 1 boincer umatlas      8699 Oct 13 11:19 runtime_log.err
[2025-10-13 11:19:24] -rw-r--r-- 1 boincer umatlas     21108 Oct 13 11:19 stderr.txt
[2025-10-13 11:19:24] HITS file was successfully produced:
[2025-10-13 11:19:24] -rw------- 1 boincer umatlas 193396114 Oct 13 11:18 shared/HITS.pool.root.1
[2025-10-13 11:19:24]  *** Contents of shared directory: ***
[2025-10-13 11:19:24] total 406588
[2025-10-13 11:19:24] -rw-r--r-- 2 boincer umatlas 220479320 Oct 13 08:28 ATLAS.root_0
[2025-10-13 11:19:24] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 08:28 start_atlas.sh
[2025-10-13 11:19:24] -rw-r--r-- 2 boincer umatlas    569682 Oct 13 08:28 input.tar.gz
[2025-10-13 11:19:24] -rw------- 1 boincer umatlas 193396114 Oct 13 11:18 HITS.pool.root.1
[2025-10-13 11:19:24] -rw------- 1 boincer umatlas   1873920 Oct 13 11:19 result.tar.gz
11:19:25 (6015): run_atlas exited; CPU time 77245.718318
11:19:25 (6015): called boinc_finish(0)

</stderr_txt>
]]>

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