Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:19:42 (4352): wrapper (7.7.26015): starting
08:19:42 (4352): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 08:19:42] Arguments: --nthreads 8
[2025-10-13 08:19:42] Threads: 8
[2025-10-13 08:19:42] Checking for CVMFS
[2025-10-13 08:19:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 08:19:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 08:19:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 08:19:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 08:19:42] 2.11.2.0 3129 200069 81652 151661 2 1 12019927 20275200 1 130560 1 71233252 99.977 9466390 25255 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 08:19:42] CVMFS is ok
[2025-10-13 08:19:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 08:19:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 08:19:42] Further information can be found at the LHC@home message board.
[2025-10-13 08:19:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 08:19:42] Checking for apptainer binary...
[2025-10-13 08:19:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 08:19:42] Running /usr/bin/apptainer --version
[2025-10-13 08:19:42] apptainer version 1.3.2-1.el7
[2025-10-13 08:19:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 08:19:44] c-204-31.aglt2.org
[2025-10-13 08:19:44] apptainer works
[2025-10-13 08:19:44] Set ATHENA_PROC_NUMBER=8
[2025-10-13 08:19:44] Set ATHENA_CORE_NUMBER=8
[2025-10-13 08:19:44] Starting ATLAS job with PandaID=6842904534
[2025-10-13 08:19:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:31:23]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:31:23] 2025-10-13 14:30:26,215 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 10:31:23] 2025-10-13 14:30:26,215 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 10:31:23] 2025-10-13 14:30:26,215 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:31:23] 2025-10-13 14:30:26,218 | INFO     | fitting pss+swap vs Time
[2025-10-13 10:31:23] 2025-10-13 14:30:26,218 | INFO     | sum of square deviations: 650252192.0
[2025-10-13 10:31:23] 2025-10-13 14:30:26,219 | INFO     | sum of deviations: -13637320796.0
[2025-10-13 10:31:23] 2025-10-13 14:30:26,219 | INFO     | mean x: 1760361909.5
[2025-10-13 10:31:23] 2025-10-13 14:30:26,219 | INFO     | mean y: 2550048.375
[2025-10-13 10:31:23] 2025-10-13 14:30:26,219 | INFO     | -- intersect: 36921487611.772896
[2025-10-13 10:31:23] 2025-10-13 14:30:26,219 | INFO     | intersect: 36921487611.772896
[2025-10-13 10:31:23] 2025-10-13 14:30:26,220 | INFO     | chi2: 2.63524733402166
[2025-10-13 10:31:23] 2025-10-13 14:30:26,220 | INFO     | sum of square deviations: 576985702.0
[2025-10-13 10:31:23] 2025-10-13 14:30:26,221 | INFO     | sum of deviations: -3499882441.999996
[2025-10-13 10:31:23] 2025-10-13 14:30:26,221 | INFO     | mean x: 1760361757.0
[2025-10-13 10:31:23] 2025-10-13 14:30:26,221 | INFO     | mean y: 2570559.4227642277
[2025-10-13 10:31:23] 2025-10-13 14:30:26,221 | INFO     | -- intersect: 10680580748.473452
[2025-10-13 10:31:23] 2025-10-13 14:30:26,221 | INFO     | intersect: 10680580748.473452
[2025-10-13 10:31:23] 2025-10-13 14:30:26,221 | INFO     | chi2: 1.7741379809171072
[2025-10-13 10:31:23] 2025-10-13 14:30:26,222 | INFO     | current chi2=1.7741379809171072 (change=32.67660465822048 %)
[2025-10-13 10:31:23] 2025-10-13 14:30:26,222 | INFO     | sum of square deviations: 509440249.5
[2025-10-13 10:31:23] 2025-10-13 14:30:26,222 | INFO     | sum of deviations: -2462184174.9999967
[2025-10-13 10:31:23] 2025-10-13 14:30:26,223 | INFO     | mean x: 1760361604.5
[2025-10-13 10:31:23] 2025-10-13 14:30:26,223 | INFO     | mean y: 2572903.627118644
[2025-10-13 10:31:23] 2025-10-13 14:30:26,223 | INFO     | -- intersect: 8510605963.699462
[2025-10-13 10:31:23] 2025-10-13 14:30:26,223 | INFO     | intersect: 8510605963.699462
[2025-10-13 10:31:23] 2025-10-13 14:30:26,223 | INFO     | chi2: 1.776547007782563
[2025-10-13 10:31:23] 2025-10-13 14:30:26,223 | INFO     | current chi2=1.776547007782563 (change=-0.13578576702418843 %)
[2025-10-13 10:31:23] 2025-10-13 14:30:26,223 | INFO     | right removable region: 117
[2025-10-13 10:31:23] 2025-10-13 14:30:26,224 | INFO     | sum of square deviations: 576985702.0
[2025-10-13 10:31:23] 2025-10-13 14:30:26,224 | INFO     | sum of deviations: -34556058055.0
[2025-10-13 10:31:23] 2025-10-13 14:30:26,224 | INFO     | mean x: 1760362062.0
[2025-10-13 10:31:23] 2025-10-13 14:30:26,225 | INFO     | mean y: 2592889.5203252034
[2025-10-13 10:31:23] 2025-10-13 14:30:26,225 | INFO     | -- intersect: 105431849457.63457
[2025-10-13 10:31:23] 2025-10-13 14:30:26,225 | INFO     | intersect: 105431849457.63457
[2025-10-13 10:31:23] 2025-10-13 14:30:26,225 | INFO     | chi2: 1.0554927483612555
[2025-10-13 10:31:23] 2025-10-13 14:30:26,225 | INFO     | current chi2=1.0554927483612555 (change=59.947108769086036 %)
[2025-10-13 10:31:23] 2025-10-13 14:30:26,225 | INFO     | sum of square deviations: 509440249.5
[2025-10-13 10:31:23] 2025-10-13 14:30:26,226 | INFO     | sum of deviations: -35073142519.5
[2025-10-13 10:31:23] 2025-10-13 14:30:26,226 | INFO     | mean x: 1760362214.5
[2025-10-13 10:31:23] 2025-10-13 14:30:26,226 | INFO     | mean y: 2593933.3305084747
[2025-10-13 10:31:23] 2025-10-13 14:30:26,226 | INFO     | -- intersect: 121197248057.53537
[2025-10-13 10:31:23] 2025-10-13 14:30:26,227 | INFO     | intersect: 121197248057.53537
[2025-10-13 10:31:23] 2025-10-13 14:30:26,227 | INFO     | chi2: 1.0147342585030825
[2025-10-13 10:31:23] 2025-10-13 14:30:26,227 | INFO     | current chi2=1.0147342585030825 (change=3.8615603869807815 %)
[2025-10-13 10:31:23] 2025-10-13 14:30:26,227 | INFO     | left removable region: 20
[2025-10-13 10:31:23] 2025-10-13 14:30:26,227 | INFO     | sum of square deviations: 282974608.0
[2025-10-13 10:31:23] 2025-10-13 14:30:26,228 | INFO     | sum of deviations: -18301713612.0
[2025-10-13 10:31:23] 2025-10-13 14:30:26,228 | INFO     | mean x: 1760362184.0
[2025-10-13 10:31:23] 2025-10-13 14:30:26,228 | INFO     | mean y: 2609748.525773196
[2025-10-13 10:31:23] 2025-10-13 14:30:26,228 | INFO     | -- intersect: 113856092125.15955
[2025-10-13 10:31:23] 2025-10-13 14:30:26,228 | INFO     | intersect: 113856092125.15955
[2025-10-13 10:31:23] 2025-10-13 14:30:26,228 | INFO     | chi2: 0.09229934388117797
[2025-10-13 10:31:23] 2025-10-13 14:30:26,229 | INFO     | -- intersect: 113856092125.15955
[2025-10-13 10:31:23] 2025-10-13 14:30:26,229 | INFO     | current memory leak: -64.68 B/s (using 97 data points, chi2=0.09)
[2025-10-13 10:31:23] 2025-10-13 14:30:26,229 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2025-10-13 10:31:23] 2025-10-13 14:30:26,229 | INFO     | ..............................
[2025-10-13 10:31:23] 2025-10-13 14:30:26,229 | INFO     | . Timing measurements:
[2025-10-13 10:31:23] 2025-10-13 14:30:26,229 | INFO     | . get job = 0 s
[2025-10-13 10:31:23] 2025-10-13 14:30:26,230 | INFO     | . initial setup = 2 s
[2025-10-13 10:31:23] 2025-10-13 14:30:26,230 | INFO     | . payload setup = 8 s
[2025-10-13 10:31:23] 2025-10-13 14:30:26,230 | INFO     | . stage-in = 0 s
[2025-10-13 10:31:23] 2025-10-13 14:30:26,230 | INFO     | . payload execution = 7780 s
[2025-10-13 10:31:23] 2025-10-13 14:30:26,230 | INFO     | . stage-out = 0 s
[2025-10-13 10:31:23] 2025-10-13 14:30:26,230 | INFO     | . log creation = 0 s
[2025-10-13 10:31:23] 2025-10-13 14:30:26,230 | INFO     | ..............................
[2025-10-13 10:31:23] 2025-10-13 14:30:26,323 | INFO     | 
[2025-10-13 10:31:23] 2025-10-13 14:30:26,324 | INFO     | job summary report
[2025-10-13 10:31:23] 2025-10-13 14:30:26,324 | INFO     | --------------------------------------------------
[2025-10-13 10:31:23] 2025-10-13 14:30:26,324 | INFO     | PanDA job id: 6842904534
[2025-10-13 10:31:23] 2025-10-13 14:30:26,324 | INFO     | task id: 46676269
[2025-10-13 10:31:23] 2025-10-13 14:30:26,324 | INFO     | errors: (none)
[2025-10-13 10:31:23] 2025-10-13 14:30:26,324 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:31:23] 2025-10-13 14:30:26,324 | INFO     | pilot state: finished 
[2025-10-13 10:31:23] 2025-10-13 14:30:26,324 | INFO     | transexitcode: 0
[2025-10-13 10:31:23] 2025-10-13 14:30:26,325 | INFO     | exeerrorcode: 0
[2025-10-13 10:31:23] 2025-10-13 14:30:26,325 | INFO     | exeerrordiag: 
[2025-10-13 10:31:23] 2025-10-13 14:30:26,325 | INFO     | exitcode: 0
[2025-10-13 10:31:23] 2025-10-13 14:30:26,325 | INFO     | exitmsg: OK
[2025-10-13 10:31:23] 2025-10-13 14:30:26,325 | INFO     | cpuconsumptiontime: 57745 s
[2025-10-13 10:31:23] 2025-10-13 14:30:26,325 | INFO     | nevents: 400
[2025-10-13 10:31:23] 2025-10-13 14:30:26,325 | INFO     | neventsw: 0
[2025-10-13 10:31:23] 2025-10-13 14:30:26,325 | INFO     | pid: 15741
[2025-10-13 10:31:23] 2025-10-13 14:30:26,325 | INFO     | pgrp: 15741
[2025-10-13 10:31:23] 2025-10-13 14:30:26,326 | INFO     | corecount: 8
[2025-10-13 10:31:23] 2025-10-13 14:30:26,326 | INFO     | event service: False
[2025-10-13 10:31:23] 2025-10-13 14:30:26,326 | INFO     | sizes: {0: 2348635, 1: 2348834, 7: 2349096, 12: 2349124, 7792: 2376755, 7793: 2376754, 7794: 2385936, 7796: 2385992, 7804: 2386186}
[2025-10-13 10:31:23] 2025-10-13 14:30:26,326 | INFO     | --------------------------------------------------
[2025-10-13 10:31:23] 2025-10-13 14:30:26,326 | INFO     | 
[2025-10-13 10:31:23] 2025-10-13 14:30:26,326 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 10:31:23] 2025-10-13 14:30:26,348 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:30:26,349 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:30:26,349 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:30:26,349 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:30:26,349 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:30:26,349 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:30:26,349 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:30:26,350 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:30:26,350 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:30:26,350 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:30:26,350 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:30:26,350 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:30:26,351 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:30:26,351 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:30:26,351 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:30:26,351 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:30:26,351 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:30:26,351 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:31:23] 2025-10-13 14:30:26,352 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:30:26,352 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:31:23] 2025-10-13 14:30:26,352 | INFO     | job 6842904534 has completed (purged errors)
[2025-10-13 10:31:23] 2025-10-13 14:30:26,352 | INFO     | overall cleanup function is called
[2025-10-13 10:31:23] 2025-10-13 14:30:27,361 | INFO     | --- collectZombieJob: --- 10, [15741]
[2025-10-13 10:31:23] 2025-10-13 14:30:27,361 | INFO     | zombie collector waiting for pid 15741
[2025-10-13 10:31:23] 2025-10-13 14:30:27,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:31:23] 2025-10-13 14:30:27,361 | INFO     | collected zombie processes
[2025-10-13 10:31:23] 2025-10-13 14:30:27,362 | INFO     | will attempt to kill all subprocesses of pid=15741
[2025-10-13 10:31:23] 2025-10-13 14:30:27,454 | INFO     | process IDs to be killed: [15741] (in reverse order)
[2025-10-13 10:31:23] 2025-10-13 14:30:27,510 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:31:23] 2025-10-13 14:30:27,511 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:31:23] 2025-10-13 14:30:27,515 | INFO     | did not find any defunct processes belonging to 15741
[2025-10-13 10:31:23] 2025-10-13 14:30:27,519 | INFO     | did not find any defunct processes belonging to 15741
[2025-10-13 10:31:23] 2025-10-13 14:30:27,519 | INFO     | ready for new job
[2025-10-13 10:31:23] 2025-10-13 14:30:27,520 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:31:23] 2025-10-13 14:30:27,521 | INFO     | ***************************************
[2025-10-13 10:31:23] 2025-10-13 14:30:27,522 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 10:31:23] 2025-10-13 14:30:27,522 | INFO     | ***************************************
[2025-10-13 10:31:23] 2025-10-13 14:30:27,522 | INFO     | 
[2025-10-13 10:31:23] 2025-10-13 14:30:27,522 | INFO     | architecture information:
[2025-10-13 10:31:23] 2025-10-13 14:30:27,523 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:31:23] 2025-10-13 14:30:27,541 | INFO     | cat /etc/os-release:
[2025-10-13 10:31:23] NAME="CentOS Linux"
[2025-10-13 10:31:23] VERSION="7 (Core)"
[2025-10-13 10:31:23] ID="centos"
[2025-10-13 10:31:23] ID_LIKE="rhel fedora"
[2025-10-13 10:31:23] VERSION_ID="7"
[2025-10-13 10:31:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:31:23] ANSI_COLOR="0;31"
[2025-10-13 10:31:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:31:23] HOME_URL="https://www.centos.org/"
[2025-10-13 10:31:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:31:23] 
[2025-10-13 10:31:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:31:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:31:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:31:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:31:23] 
[2025-10-13 10:31:23] 2025-10-13 14:30:27,542 | INFO     | ***************************************
[2025-10-13 10:31:23] 2025-10-13 14:30:28,045 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 10:31:23] 2025-10-13 14:30:28,067 | INFO     | sufficient remaining disk space (18548260864 B)
[2025-10-13 10:31:23] 2025-10-13 14:30:28,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:31:23] 2025-10-13 14:30:28,068 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:31:23] 2025-10-13 14:30:28,068 | INFO     | update_server=False
[2025-10-13 10:31:23] 2025-10-13 14:30:28,069 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:31:23] 2025-10-13 14:30:28,069 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:31:23] 2025-10-13 14:30:28,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:31:23] 2025-10-13 14:30:28,070 | INFO     | aborting loop
[2025-10-13 10:31:23] 2025-10-13 14:30:28,530 | INFO     | all job control threads have been joined
[2025-10-13 10:31:23] 2025-10-13 14:30:28,726 | INFO     | all payload control threads have been joined
[2025-10-13 10:31:23] 2025-10-13 14:30:28,827 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:31:23] 2025-10-13 14:30:28,883 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:31:23] 2025-10-13 14:30:29,014 | INFO     | all data control threads have been joined
[2025-10-13 10:31:23] 2025-10-13 14:30:29,074 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:30:29,075 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:30:29,076 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:30:29,335 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:30:29,356 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:30:29,535 | INFO     | [job] control thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:30:29,731 | INFO     | [payload] control thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:30:29,830 | INFO     | [job] validate thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:30:29,873 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:30:30,018 | INFO     | [data] control thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:30:30,065 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:30:30,174 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:30:30,299 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:30:30,832 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:30:32,889 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:30:38,736 | INFO     | job.realtimelogging is not enabled
[2025-10-13 10:31:23] 2025-10-13 14:30:39,741 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:31:23] 2025-10-13 14:30:58,314 | INFO     | PID=8141 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 10:31:23] 2025-10-13 14:30:58,315 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:31:23] 2025-10-13 14:30:58,315 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:31:23] 2025-10-13 14:30:58,315 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:31:23] 2025-10-13 14:31:16,150 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:31:23] 2025-10-13 14:31:17,820 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140005327050560)>', '<ExcThread(monitor, started 140004886030080)>']
[2025-10-13 10:31:23] 2025-10-13 14:31:18,404 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:31:23] 2025-10-13 14:31:18,405 | INFO     | [monitor] control thread has ended
[2025-10-13 10:31:23] 2025-10-13 14:31:22,837 | INFO     | all workflow threads have been joined
[2025-10-13 10:31:23] 2025-10-13 14:31:22,838 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:31:23] 2025-10-13 14:31:22,838 | INFO     | traces error code: 0
[2025-10-13 10:31:23] 2025-10-13 14:31:22,838 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:31:23] 2025-10-13 14:31:22,945 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:31:23] 2025-10-13 14:31:22,949 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:31:23] 2025-10-13 14:31:22,954 [wrapper] pilotpid: 8141
[2025-10-13 10:31:23] 2025-10-13 14:31:22,959 [wrapper] Pilot exit status: 0
[2025-10-13 10:31:23] 2025-10-13 14:31:22,977 [wrapper] pandaids: 6842904534
[2025-10-13 10:31:23] 2025-10-13 14:31:23,026 [wrapper] cleanup supervisor_pilot 12594 8142
[2025-10-13 10:31:23] 2025-10-13 14:31:23,031 [wrapper] Test setup, not cleaning
[2025-10-13 10:31:23] 2025-10-13 14:31:23,036 [wrapper] apfmon messages muted
[2025-10-13 10:31:23] 2025-10-13 14:31:23,041 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:31:23] 2025-10-13 14:31:23,046 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:31:23]  *** Error codes and diagnostics ***
[2025-10-13 10:31:23]     "exeErrorCode": 0,
[2025-10-13 10:31:23]     "exeErrorDiag": "",
[2025-10-13 10:31:23]     "pilotErrorCode": 0,
[2025-10-13 10:31:23]     "pilotErrorDiag": "",
[2025-10-13 10:31:23]  *** Listing of results directory ***
[2025-10-13 10:31:23] total 414504
[2025-10-13 10:31:23] -rw-r--r-- 1 boincer umatlas    557409 Oct 13 08:18 pilot3.tar.gz
[2025-10-13 10:31:23] -rwx------ 1 boincer umatlas     36292 Oct 13 08:19 runpilot2-wrapper.sh
[2025-10-13 10:31:23] -rw-r--r-- 1 boincer umatlas      5112 Oct 13 08:19 queuedata.json
[2025-10-13 10:31:23] -rw-r--r-- 1 boincer umatlas       100 Oct 13 08:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:31:23] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 08:19 run_atlas
[2025-10-13 10:31:23] -rw-r--r-- 1 boincer umatlas       105 Oct 13 08:19 job.xml
[2025-10-13 10:31:23] -rw-r--r-- 2 boincer umatlas 222382289 Oct 13 08:19 EVNT.46676267._004445.pool.root.1
[2025-10-13 10:31:23] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 08:19 start_atlas.sh
[2025-10-13 10:31:23] drwxrwx--x 2 boincer umatlas      4096 Oct 13 08:19 shared
[2025-10-13 10:31:23] -rw-r--r-- 2 boincer umatlas    569677 Oct 13 08:19 input.tar.gz
[2025-10-13 10:31:23] -rw-r--r-- 1 boincer umatlas         0 Oct 13 08:19 boinc_lockfile
[2025-10-13 10:31:23] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 08:19 pandaJob.out
[2025-10-13 10:31:23] -rw------- 1 boincer umatlas    972497 Oct 13 08:20 agis_schedconf.cvmfs.json
[2025-10-13 10:31:23] -rw------- 1 boincer umatlas   1560580 Oct 13 08:20 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:31:23] drwx------ 5 boincer umatlas      4096 Oct 13 08:20 pilot3
[2025-10-13 10:31:23] -rw-r--r-- 1 boincer umatlas      5909 Oct 13 10:28 init_data.xml
[2025-10-13 10:31:23] -rw------- 1 boincer umatlas 195212013 Oct 13 10:29 HITS.46676269._096780.pool.root.1
[2025-10-13 10:31:23] -rw-r--r-- 1 boincer umatlas       529 Oct 13 10:29 boinc_task_state.xml
[2025-10-13 10:31:23] -rw------- 1 boincer umatlas      1049 Oct 13 10:30 memory_monitor_summary.json
[2025-10-13 10:31:23] -rw------- 1 boincer umatlas    379640 Oct 13 10:30 log.46676269._096780.job.log.tgz.1
[2025-10-13 10:31:23] -rw------- 1 boincer umatlas      7853 Oct 13 10:30 heartbeat.json
[2025-10-13 10:31:23] -rw------- 1 boincer umatlas        95 Oct 13 10:30 pilot_heartbeat.json
[2025-10-13 10:31:23] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 10:31 boinc_mmap_file
[2025-10-13 10:31:23] -rw-r--r-- 1 boincer umatlas        27 Oct 13 10:31 wrapper_checkpoint.txt
[2025-10-13 10:31:23] -rw------- 1 boincer umatlas      4817 Oct 13 10:31 pilotlog.txt
[2025-10-13 10:31:23] -rw------- 1 boincer umatlas   1098679 Oct 13 10:31 log.46676269._096780.job.log.1
[2025-10-13 10:31:23] -rw------- 1 boincer umatlas       357 Oct 13 10:31 output.list
[2025-10-13 10:31:23] -rw-r--r-- 1 boincer umatlas       620 Oct 13 10:31 runtime_log
[2025-10-13 10:31:23] -rw------- 1 boincer umatlas   1495040 Oct 13 10:31 result.tar.gz
[2025-10-13 10:31:23] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 10:31 runtime_log.err
[2025-10-13 10:31:23] -rw------- 1 boincer umatlas       661 Oct 13 10:31 g6TLDmIhWS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZmmNDmwjmyPm.diag
[2025-10-13 10:31:23] -rw-r--r-- 1 boincer umatlas     20856 Oct 13 10:31 stderr.txt
[2025-10-13 10:31:23] HITS file was successfully produced:
[2025-10-13 10:31:23] -rw------- 1 boincer umatlas 195212013 Oct 13 10:29 shared/HITS.pool.root.1
[2025-10-13 10:31:23]  *** Contents of shared directory: ***
[2025-10-13 10:31:23] total 409856
[2025-10-13 10:31:23] -rw-r--r-- 2 boincer umatlas 222382289 Oct 13 08:19 ATLAS.root_0
[2025-10-13 10:31:23] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 08:19 start_atlas.sh
[2025-10-13 10:31:23] -rw-r--r-- 2 boincer umatlas    569677 Oct 13 08:19 input.tar.gz
[2025-10-13 10:31:23] -rw------- 1 boincer umatlas 195212013 Oct 13 10:29 HITS.pool.root.1
[2025-10-13 10:31:23] -rw------- 1 boincer umatlas   1495040 Oct 13 10:31 result.tar.gz
10:31:24 (4352): run_atlas exited; CPU time 57682.507983
10:31:24 (4352): called boinc_finish(0)

</stderr_txt>
]]>

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