Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:44:07 (1554): wrapper (7.7.26015): starting
05:44:07 (1554): wrapper: running run_atlas (--nthreads 8)
[2025-10-14 05:44:07] Arguments: --nthreads 8
[2025-10-14 05:44:07] Threads: 8
[2025-10-14 05:44:07] Checking for CVMFS
[2025-10-14 05:44:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 05:44:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 05:44:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 05:44:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 05:44:10] 2.11.2.0 20219 222764 135412 151683 3 108 13643108 25165824 4632 130560 0 116183166 99.895 63946194 3159 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-14 05:44:10] CVMFS is ok
[2025-10-14 05:44:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 05:44:10] Checking for apptainer binary...
[2025-10-14 05:44:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 05:44:10] Running /usr/bin/apptainer --version
[2025-10-14 05:44:10] apptainer version 1.3.2-1.el7
[2025-10-14 05:44:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 05:44:30] cg-vwn421.simple-grid.lan
[2025-10-14 05:44:30] apptainer works
[2025-10-14 05:44:30] Set ATHENA_PROC_NUMBER=8
[2025-10-14 05:44:30] Set ATHENA_CORE_NUMBER=8
[2025-10-14 05:44:31] Starting ATLAS job with PandaID=6840850029
[2025-10-14 05:44:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/27 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 09:12:52]  *** The last 200 lines of the pilot log: ***
[2025-10-14 09:12:52] 2025-10-14 07:11:45,489 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 09:12:52] 2025-10-14 07:11:45,489 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 09:12:52] 2025-10-14 07:11:45,496 | INFO     | fitting pss+swap vs Time
[2025-10-14 09:12:52] 2025-10-14 07:11:45,496 | INFO     | sum of square deviations: 2406926989.5
[2025-10-14 09:12:52] 2025-10-14 07:11:45,498 | INFO     | sum of deviations: 4833752667.000002
[2025-10-14 09:12:52] 2025-10-14 07:11:45,498 | INFO     | mean x: 1760419770.5
[2025-10-14 09:12:52] 2025-10-14 07:11:45,498 | INFO     | mean y: 2474510.0303030303
[2025-10-14 09:12:52] 2025-10-14 07:11:45,498 | INFO     | -- intersect: -3532918876.5641127
[2025-10-14 09:12:52] 2025-10-14 07:11:45,498 | INFO     | intersect: -3532918876.5641127
[2025-10-14 09:12:52] 2025-10-14 07:11:45,498 | INFO     | chi2: 2.271828736496526
[2025-10-14 09:12:52] 2025-10-14 07:11:45,499 | INFO     | sum of square deviations: 2229146912.0
[2025-10-14 09:12:52] 2025-10-14 07:11:45,500 | INFO     | sum of deviations: 17482283836.999996
[2025-10-14 09:12:52] 2025-10-14 07:11:45,500 | INFO     | mean x: 1760419618.0
[2025-10-14 09:12:52] 2025-10-14 07:11:45,500 | INFO     | mean y: 2485131.196891192
[2025-10-14 09:12:52] 2025-10-14 07:11:45,500 | INFO     | -- intersect: -13803763020.69661
[2025-10-14 09:12:52] 2025-10-14 07:11:45,500 | INFO     | intersect: -13803763020.69661
[2025-10-14 09:12:52] 2025-10-14 07:11:45,504 | INFO     | chi2: 1.5052453530110228
[2025-10-14 09:12:52] 2025-10-14 07:11:45,504 | INFO     | current chi2=1.5052453530110228 (change=33.74300937260266 %)
[2025-10-14 09:12:52] 2025-10-14 07:11:45,504 | INFO     | sum of square deviations: 2060343747.0
[2025-10-14 09:12:52] 2025-10-14 07:11:45,506 | INFO     | sum of deviations: 16899317847.5
[2025-10-14 09:12:52] 2025-10-14 07:11:45,506 | INFO     | mean x: 1760419465.5
[2025-10-14 09:12:52] 2025-10-14 07:11:45,506 | INFO     | mean y: 2484604.39893617
[2025-10-14 09:12:52] 2025-10-14 07:11:45,506 | INFO     | -- intersect: -14436799197.50471
[2025-10-14 09:12:52] 2025-10-14 07:11:45,506 | INFO     | intersect: -14436799197.50471
[2025-10-14 09:12:52] 2025-10-14 07:11:45,507 | INFO     | chi2: 1.5062896422610854
[2025-10-14 09:12:52] 2025-10-14 07:11:45,507 | INFO     | current chi2=1.5062896422610854 (change=-0.0693766798863498 %)
[2025-10-14 09:12:52] 2025-10-14 07:11:45,507 | INFO     | right removable region: 187
[2025-10-14 09:12:52] 2025-10-14 07:11:45,507 | INFO     | sum of square deviations: 2229146912.0
[2025-10-14 09:12:52] 2025-10-14 07:11:45,512 | INFO     | sum of deviations: -23460891397.0
[2025-10-14 09:12:52] 2025-10-14 07:11:45,512 | INFO     | mean x: 1760419923.0
[2025-10-14 09:12:52] 2025-10-14 07:11:45,512 | INFO     | mean y: 2498476.8756476683
[2025-10-14 09:12:52] 2025-10-14 07:11:45,512 | INFO     | -- intersect: 18530223322.773155
[2025-10-14 09:12:52] 2025-10-14 07:11:45,512 | INFO     | intersect: 18530223322.773155
[2025-10-14 09:12:52] 2025-10-14 07:11:45,512 | INFO     | chi2: 0.8835505883517556
[2025-10-14 09:12:52] 2025-10-14 07:11:45,513 | INFO     | current chi2=0.8835505883517556 (change=61.10839808663074 %)
[2025-10-14 09:12:52] 2025-10-14 07:11:45,513 | INFO     | sum of square deviations: 2060343747.0
[2025-10-14 09:12:52] 2025-10-14 07:11:45,514 | INFO     | sum of deviations: -20833807782.5
[2025-10-14 09:12:52] 2025-10-14 07:11:45,514 | INFO     | mean x: 1760420075.5
[2025-10-14 09:12:52] 2025-10-14 07:11:45,514 | INFO     | mean y: 2496055.8031914895
[2025-10-14 09:12:52] 2025-10-14 07:11:45,514 | INFO     | -- intersect: 17803532180.393684
[2025-10-14 09:12:52] 2025-10-14 07:11:45,514 | INFO     | intersect: 17803532180.393684
[2025-10-14 09:12:52] 2025-10-14 07:11:45,515 | INFO     | chi2: 0.867553749180173
[2025-10-14 09:12:52] 2025-10-14 07:11:45,515 | INFO     | current chi2=0.867553749180173 (change=1.8105176299440104 %)
[2025-10-14 09:12:52] 2025-10-14 07:11:45,515 | INFO     | left removable region: 20
[2025-10-14 09:12:52] 2025-10-14 07:11:45,515 | INFO     | sum of square deviations: 1444149868.0
[2025-10-14 09:12:52] 2025-10-14 07:11:45,516 | INFO     | sum of deviations: 3114909978.0
[2025-10-14 09:12:52] 2025-10-14 07:11:45,516 | INFO     | mean x: 1760420045.0
[2025-10-14 09:12:52] 2025-10-14 07:11:45,516 | INFO     | mean y: 2495574.155688623
[2025-10-14 09:12:52] 2025-10-14 07:11:45,519 | INFO     | -- intersect: -3794582613.605991
[2025-10-14 09:12:52] 2025-10-14 07:11:45,520 | INFO     | intersect: -3794582613.605991
[2025-10-14 09:12:52] 2025-10-14 07:11:45,520 | INFO     | chi2: 0.0007787231889801951
[2025-10-14 09:12:52] 2025-10-14 07:11:45,520 | INFO     | -- intersect: -3794582613.605991
[2025-10-14 09:12:52] 2025-10-14 07:11:45,520 | INFO     | current memory leak: 2.16 B/s (using 167 data points, chi2=0.00)
[2025-10-14 09:12:52] 2025-10-14 07:11:45,521 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2025-10-14 09:12:52] 2025-10-14 07:11:45,521 | INFO     | ..............................
[2025-10-14 09:12:52] 2025-10-14 07:11:45,521 | INFO     | . Timing measurements:
[2025-10-14 09:12:52] 2025-10-14 07:11:45,521 | INFO     | . get job = 0 s
[2025-10-14 09:12:52] 2025-10-14 07:11:45,521 | INFO     | . initial setup = 5 s
[2025-10-14 09:12:52] 2025-10-14 07:11:45,521 | INFO     | . payload setup = 9 s
[2025-10-14 09:12:52] 2025-10-14 07:11:45,521 | INFO     | . stage-in = 0 s
[2025-10-14 09:12:52] 2025-10-14 07:11:45,521 | INFO     | . payload execution = 12052 s
[2025-10-14 09:12:52] 2025-10-14 07:11:45,521 | INFO     | . stage-out = 3 s
[2025-10-14 09:12:52] 2025-10-14 07:11:45,522 | INFO     | . log creation = 1 s
[2025-10-14 09:12:52] 2025-10-14 07:11:45,522 | INFO     | ..............................
[2025-10-14 09:12:52] 2025-10-14 07:11:45,902 | INFO     | 
[2025-10-14 09:12:52] 2025-10-14 07:11:45,902 | INFO     | job summary report
[2025-10-14 09:12:52] 2025-10-14 07:11:45,902 | INFO     | --------------------------------------------------
[2025-10-14 09:12:52] 2025-10-14 07:11:45,902 | INFO     | PanDA job id: 6840850029
[2025-10-14 09:12:52] 2025-10-14 07:11:45,902 | INFO     | task id: 46676269
[2025-10-14 09:12:52] 2025-10-14 07:11:45,902 | INFO     | errors: (none)
[2025-10-14 09:12:52] 2025-10-14 07:11:45,902 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 09:12:52] 2025-10-14 07:11:45,902 | INFO     | pilot state: finished 
[2025-10-14 09:12:52] 2025-10-14 07:11:45,903 | INFO     | transexitcode: 0
[2025-10-14 09:12:52] 2025-10-14 07:11:45,903 | INFO     | exeerrorcode: 0
[2025-10-14 09:12:52] 2025-10-14 07:11:45,903 | INFO     | exeerrordiag: 
[2025-10-14 09:12:52] 2025-10-14 07:11:45,903 | INFO     | exitcode: 0
[2025-10-14 09:12:52] 2025-10-14 07:11:45,903 | INFO     | exitmsg: OK
[2025-10-14 09:12:52] 2025-10-14 07:11:45,903 | INFO     | cpuconsumptiontime: 46046 s
[2025-10-14 09:12:52] 2025-10-14 07:11:45,903 | INFO     | nevents: 400
[2025-10-14 09:12:52] 2025-10-14 07:11:45,903 | INFO     | neventsw: 0
[2025-10-14 09:12:52] 2025-10-14 07:11:45,903 | INFO     | pid: 12266
[2025-10-14 09:12:52] 2025-10-14 07:11:45,903 | INFO     | pgrp: 12266
[2025-10-14 09:12:52] 2025-10-14 07:11:45,903 | INFO     | corecount: 8
[2025-10-14 09:12:52] 2025-10-14 07:11:45,903 | INFO     | event service: False
[2025-10-14 09:12:52] 2025-10-14 07:11:45,903 | INFO     | sizes: {0: 2348687, 1: 2348886, 12: 2348886, 17: 2349176, 23: 2349204, 12066: 2378521, 12071: 2387521, 12075: 2387577, 12173: 2387771}
[2025-10-14 09:12:52] 2025-10-14 07:11:45,903 | INFO     | --------------------------------------------------
[2025-10-14 09:12:52] 2025-10-14 07:11:45,903 | INFO     | 
[2025-10-14 09:12:52] 2025-10-14 07:11:45,904 | INFO     | executing command: ls -lF /var/lib/boinc/slots/27
[2025-10-14 09:12:52] 2025-10-14 07:11:46,594 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 09:12:52] 2025-10-14 07:11:46,594 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 09:12:52] 2025-10-14 07:11:46,594 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 09:12:52] 2025-10-14 07:11:46,594 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 09:12:52] 2025-10-14 07:11:46,595 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 09:12:52] 2025-10-14 07:11:46,595 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 09:12:52] 2025-10-14 07:11:46,595 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 09:12:52] 2025-10-14 07:11:46,595 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 09:12:52] 2025-10-14 07:11:46,595 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 09:12:52] 2025-10-14 07:11:46,595 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 09:12:52] 2025-10-14 07:11:46,595 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 09:12:52] 2025-10-14 07:11:46,595 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 09:12:52] 2025-10-14 07:11:46,595 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 09:12:52] 2025-10-14 07:11:46,595 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 09:12:52] 2025-10-14 07:11:46,595 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 09:12:52] 2025-10-14 07:11:46,595 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 09:12:52] 2025-10-14 07:11:46,595 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 09:12:52] 2025-10-14 07:11:46,595 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 09:12:52] 2025-10-14 07:11:46,596 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 09:12:52] 2025-10-14 07:11:46,596 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 09:12:52] 2025-10-14 07:11:46,596 | INFO     | job 6840850029 has completed (purged errors)
[2025-10-14 09:12:52] 2025-10-14 07:11:46,596 | INFO     | overall cleanup function is called
[2025-10-14 09:12:52] 2025-10-14 07:11:47,605 | INFO     | --- collectZombieJob: --- 10, [12266]
[2025-10-14 09:12:52] 2025-10-14 07:11:47,605 | INFO     | zombie collector waiting for pid 12266
[2025-10-14 09:12:52] 2025-10-14 07:11:47,605 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 09:12:52] 2025-10-14 07:11:47,605 | INFO     | collected zombie processes
[2025-10-14 09:12:52] 2025-10-14 07:11:47,605 | INFO     | will attempt to kill all subprocesses of pid=12266
[2025-10-14 09:12:52] 2025-10-14 07:11:47,730 | INFO     | process IDs to be killed: [12266] (in reverse order)
[2025-10-14 09:12:52] 2025-10-14 07:11:48,589 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 09:12:52] 2025-10-14 07:11:48,589 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 09:12:52] 2025-10-14 07:11:48,592 | INFO     | did not find any defunct processes belonging to 12266
[2025-10-14 09:12:52] 2025-10-14 07:11:48,595 | INFO     | did not find any defunct processes belonging to 12266
[2025-10-14 09:12:52] 2025-10-14 07:11:48,595 | INFO     | ready for new job
[2025-10-14 09:12:52] 2025-10-14 07:11:48,595 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 09:12:52] 2025-10-14 07:11:48,597 | INFO     | ***************************************
[2025-10-14 09:12:52] 2025-10-14 07:11:48,597 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 09:12:52] 2025-10-14 07:11:48,597 | INFO     | ***************************************
[2025-10-14 09:12:52] 2025-10-14 07:11:48,597 | INFO     | 
[2025-10-14 09:12:52] 2025-10-14 07:11:48,598 | INFO     | pilot is running in a VM
[2025-10-14 09:12:52] 2025-10-14 07:11:48,598 | INFO     | architecture information:
[2025-10-14 09:12:52] 2025-10-14 07:11:48,601 | INFO     | executing command: cat /etc/os-release
[2025-10-14 09:12:52] 2025-10-14 07:11:48,717 | INFO     | cat /etc/os-release:
[2025-10-14 09:12:52] NAME="CentOS Linux"
[2025-10-14 09:12:52] VERSION="7 (Core)"
[2025-10-14 09:12:52] ID="centos"
[2025-10-14 09:12:52] ID_LIKE="rhel fedora"
[2025-10-14 09:12:52] VERSION_ID="7"
[2025-10-14 09:12:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 09:12:52] ANSI_COLOR="0;31"
[2025-10-14 09:12:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 09:12:52] HOME_URL="https://www.centos.org/"
[2025-10-14 09:12:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 09:12:52] 
[2025-10-14 09:12:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 09:12:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 09:12:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 09:12:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 09:12:52] 
[2025-10-14 09:12:52] 2025-10-14 07:11:48,717 | INFO     | ***************************************
[2025-10-14 09:12:52] 2025-10-14 07:11:49,221 | INFO     | executing command: df -mP /var/lib/boinc/slots/27
[2025-10-14 09:12:52] 2025-10-14 07:11:49,387 | INFO     | sufficient remaining disk space (496276340736 B)
[2025-10-14 09:12:52] 2025-10-14 07:11:49,388 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 09:12:52] 2025-10-14 07:11:49,388 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 09:12:52] 2025-10-14 07:11:49,388 | INFO     | update_server=False
[2025-10-14 09:12:52] 2025-10-14 07:11:49,388 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 09:12:52] 2025-10-14 07:11:49,388 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 09:12:52] 2025-10-14 07:11:49,958 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 09:12:52] 2025-10-14 07:11:49,958 | INFO     | aborting loop
[2025-10-14 09:12:52] 2025-10-14 07:11:50,014 | INFO     | all data control threads have been joined
[2025-10-14 09:12:52] 2025-10-14 07:11:50,363 | INFO     | all payload control threads have been joined
[2025-10-14 09:12:52] 2025-10-14 07:11:50,394 | INFO     | [job] retrieve thread has finished
[2025-10-14 09:12:52] 2025-10-14 07:11:50,585 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 09:12:52] 2025-10-14 07:11:50,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 09:12:52] 2025-10-14 07:11:50,823 | INFO     | all job control threads have been joined
[2025-10-14 09:12:52] 2025-10-14 07:11:50,873 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 09:12:52] 2025-10-14 07:11:50,964 | INFO     | [job] job monitor thread has finished
[2025-10-14 09:12:52] 2025-10-14 07:11:50,971 | INFO     | [payload] failed_post thread has finished
[2025-10-14 09:12:52] 2025-10-14 07:11:50,982 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 09:12:52] 2025-10-14 07:11:51,020 | INFO     | [data] control thread has finished
[2025-10-14 09:12:52] 2025-10-14 07:11:51,166 | INFO     | [data] copytool_in thread has finished
[2025-10-14 09:12:52] 2025-10-14 07:11:51,369 | INFO     | [payload] control thread has finished
[2025-10-14 09:12:52] 2025-10-14 07:11:51,396 | INFO     | [data] copytool_out thread has finished
[2025-10-14 09:12:52] 2025-10-14 07:11:51,408 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 09:12:52] 2025-10-14 07:11:51,654 | INFO     | [job] queue monitor thread has finished
[2025-10-14 09:12:52] 2025-10-14 07:11:51,830 | INFO     | [job] control thread has finished
[2025-10-14 09:12:52] 2025-10-14 07:11:51,874 | INFO     | [job] validate thread has finished
[2025-10-14 09:12:52] 2025-10-14 07:11:51,941 | INFO     | [payload] validate_post thread has finished
[2025-10-14 09:12:52] 2025-10-14 07:11:51,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 09:12:52] 2025-10-14 07:11:55,992 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 09:12:52] 2025-10-14 07:12:18,163 | INFO     | PID=5664 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-14 09:12:52] 2025-10-14 07:12:18,163 | INFO     | .. there are 9 such processes running
[2025-10-14 09:12:52] 2025-10-14 07:12:18,164 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 09:12:52] 2025-10-14 07:12:18,164 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 09:12:52] 2025-10-14 07:12:18,164 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 09:12:52] 2025-10-14 07:12:42,546 | INFO     | [monitor] cgroup control has ended
[2025-10-14 09:12:52] 2025-10-14 07:12:44,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140117037037376)>', '<ExcThread(monitor, started 140116462925568)>']
[2025-10-14 09:12:52] 2025-10-14 07:12:44,321 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 09:12:52] 2025-10-14 07:12:44,321 | INFO     | [monitor] control thread has ended
[2025-10-14 09:12:52] 2025-10-14 07:12:49,065 | INFO     | all workflow threads have been joined
[2025-10-14 09:12:52] 2025-10-14 07:12:49,065 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 09:12:52] 2025-10-14 07:12:49,065 | INFO     | traces error code: 0
[2025-10-14 09:12:52] 2025-10-14 07:12:49,065 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 09:12:52] 2025-10-14 07:12:49,476 [wrapper] ==== pilot stdout END ====
[2025-10-14 09:12:52] 2025-10-14 07:12:49,579 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 09:12:52] 2025-10-14 07:12:49,678 [wrapper] pilotpid: 5664
[2025-10-14 09:12:52] 2025-10-14 07:12:49,746 [wrapper] Pilot exit status: 0
[2025-10-14 09:12:52] 2025-10-14 07:12:49,968 [wrapper] pandaids: 6840850029
[2025-10-14 09:12:52] 2025-10-14 07:12:50,073 [wrapper] cleanup supervisor_pilot 17502 5665
[2025-10-14 09:12:52] 2025-10-14 07:12:50,165 [wrapper] Test setup, not cleaning
[2025-10-14 09:12:52] 2025-10-14 07:12:50,223 [wrapper] apfmon messages muted
[2025-10-14 09:12:52] 2025-10-14 07:12:50,278 [wrapper] ==== wrapper stdout END ====
[2025-10-14 09:12:52] 2025-10-14 07:12:50,373 [wrapper] ==== wrapper stderr END ====
[2025-10-14 09:12:52]  *** Error codes and diagnostics ***
[2025-10-14 09:12:52]     "exeErrorCode": 0,
[2025-10-14 09:12:52]     "exeErrorDiag": "",
[2025-10-14 09:12:52]     "pilotErrorCode": 0,
[2025-10-14 09:12:52]     "pilotErrorDiag": "",
[2025-10-14 09:12:52]  *** Listing of results directory ***
[2025-10-14 09:12:52] total 407800
[2025-10-14 09:12:52] -rw-r--r--. 1 boinc boinc    557409 Oct 12 23:57 pilot3.tar.gz
[2025-10-14 09:12:52] -rwx------. 1 boinc boinc     36292 Oct 13 00:02 runpilot2-wrapper.sh
[2025-10-14 09:12:52] -rw-r--r--. 1 boinc boinc      5112 Oct 13 00:02 queuedata.json
[2025-10-14 09:12:52] -rw-r--r--. 1 boinc boinc       100 Oct 14 05:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 09:12:52] -rwxr-xr-x. 1 boinc boinc      7986 Oct 14 05:44 run_atlas
[2025-10-14 09:12:52] -rw-r--r--. 1 boinc boinc       105 Oct 14 05:44 job.xml
[2025-10-14 09:12:52] -rw-r--r--. 2 boinc boinc 222640114 Oct 14 05:44 EVNT.46676267._004056.pool.root.1
[2025-10-14 09:12:52] -rw-r--r--. 2 boinc boinc     15120 Oct 14 05:44 start_atlas.sh
[2025-10-14 09:12:52] drwxrwx--x. 2 boinc boinc        68 Oct 14 05:44 shared
[2025-10-14 09:12:52] -rw-r--r--. 2 boinc boinc    569679 Oct 14 05:44 input.tar.gz
[2025-10-14 09:12:52] -rw-r--r--. 1 boinc boinc      6390 Oct 14 05:44 init_data.xml
[2025-10-14 09:12:52] -rw-r--r--. 1 boinc boinc         0 Oct 14 05:44 boinc_lockfile
[2025-10-14 09:12:52] -rw-r--r--. 1 boinc boinc      2550 Oct 14 05:44 pandaJob.out
[2025-10-14 09:12:52] -rw-------. 1 boinc boinc    972807 Oct 14 05:48 agis_schedconf.cvmfs.json
[2025-10-14 09:12:52] drwx------. 5 boinc boinc      4096 Oct 14 05:48 pilot3
[2025-10-14 09:12:52] -rw-------. 1 boinc boinc 186878699 Oct 14 09:08 HITS.46676269._090621.pool.root.1
[2025-10-14 09:12:52] -rw-r--r--. 1 boinc boinc       530 Oct 14 09:09 boinc_task_state.xml
[2025-10-14 09:12:52] -rw-------. 1 boinc boinc      1016 Oct 14 09:09 memory_monitor_summary.json
[2025-10-14 09:12:52] -rw-------. 1 boinc boinc   1560580 Oct 14 09:09 agis_ddmendpoints.agis.ALL.json
[2025-10-14 09:12:52] -rw-------. 1 boinc boinc    434917 Oct 14 09:10 log.46676269._090621.job.log.tgz.1
[2025-10-14 09:12:52] -rw-------. 1 boinc boinc      7774 Oct 14 09:11 heartbeat.json
[2025-10-14 09:12:52] -rw-------. 1 boinc boinc        95 Oct 14 09:12 pilot_heartbeat.json
[2025-10-14 09:12:52] -rw-r--r--. 1 boinc boinc      8192 Oct 14 09:12 boinc_mmap_file
[2025-10-14 09:12:52] -rw-r--r--. 1 boinc boinc        28 Oct 14 09:12 wrapper_checkpoint.txt
[2025-10-14 09:12:52] -rw-------. 1 boinc boinc      4884 Oct 14 09:12 pilotlog.txt
[2025-10-14 09:12:52] -rw-------. 1 boinc boinc   1656067 Oct 14 09:12 log.46676269._090621.job.log.1
[2025-10-14 09:12:52] -rw-------. 1 boinc boinc       357 Oct 14 09:12 output.list
[2025-10-14 09:12:52] -rw-r--r--. 1 boinc boinc       620 Oct 14 09:12 runtime_log
[2025-10-14 09:12:52] -rw-------. 1 boinc boinc   2109440 Oct 14 09:12 result.tar.gz
[2025-10-14 09:12:52] -rw-r--r--. 1 boinc boinc      8717 Oct 14 09:12 runtime_log.err
[2025-10-14 09:12:52] -rw-------. 1 boinc boinc       657 Oct 14 09:12 HMCODmZKJS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmumlNDm6qgzfn.diag
[2025-10-14 09:12:52] -rw-r--r--. 1 boinc boinc     20576 Oct 14 09:12 stderr.txt
[2025-10-14 09:12:52] HITS file was successfully produced:
[2025-10-14 09:12:52] -rw-------. 1 boinc boinc 186878699 Oct 14 09:08 shared/HITS.pool.root.1
[2025-10-14 09:12:52]  *** Contents of shared directory: ***
[2025-10-14 09:12:52] total 402560
[2025-10-14 09:12:52] -rw-r--r--. 2 boinc boinc 222640114 Oct 14 05:44 ATLAS.root_0
[2025-10-14 09:12:52] -rw-r--r--. 2 boinc boinc     15120 Oct 14 05:44 start_atlas.sh
[2025-10-14 09:12:52] -rw-r--r--. 2 boinc boinc    569679 Oct 14 05:44 input.tar.gz
[2025-10-14 09:12:52] -rw-------. 1 boinc boinc 186878699 Oct 14 09:08 HITS.pool.root.1
[2025-10-14 09:12:52] -rw-------. 1 boinc boinc   2109440 Oct 14 09:12 result.tar.gz
09:12:53 (1554): run_atlas exited; CPU time 46172.184908
09:12:53 (1554): called boinc_finish(0)

</stderr_txt>
]]>

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