Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:17:23 (765836): wrapper (7.7.26015): starting
09:17:23 (765836): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 09:17:23] Arguments: --nthreads 9
[2025-10-13 09:17:23] Threads: 9
[2025-10-13 09:17:23] Checking for CVMFS
[2025-10-13 09:17:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:17:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:17:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:17:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:17:25] 2.13.2.0 1969590 130751 278920 151662 2 32 20050423 32935936 12514 16776704 0 95922977 99.695 80300174 29596 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 09:17:25] CVMFS is ok
[2025-10-13 09:17:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:17:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:17:25] Further information can be found at the LHC@home message board.
[2025-10-13 09:17:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:17:25] Checking for apptainer binary...
[2025-10-13 09:17:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:17:25] Running /usr/bin/apptainer --version
[2025-10-13 09:17:25] apptainer version 1.4.3-1.el9
[2025-10-13 09:17:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:17:26] c-8-36.aglt2.org
[2025-10-13 09:17:26] apptainer works
[2025-10-13 09:17:26] Set ATHENA_PROC_NUMBER=9
[2025-10-13 09:17:26] Set ATHENA_CORE_NUMBER=9
[2025-10-13 09:17:26] Starting ATLAS job with PandaID=6842902648
[2025-10-13 09:17:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:33:23]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:33:23] 2025-10-13 15:32:41,805 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:33:23] 2025-10-13 15:32:41,805 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:33:23] 2025-10-13 15:32:41,808 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:33:23] 2025-10-13 15:32:41,808 | INFO     | sum of square deviations: 697014325.5267191
[2025-10-13 11:33:23] 2025-10-13 15:32:41,809 | INFO     | sum of deviations: 1230663048.0000043
[2025-10-13 11:33:23] 2025-10-13 15:32:41,809 | INFO     | mean x: 1760365551.1374047
[2025-10-13 11:33:23] 2025-10-13 15:32:41,809 | INFO     | mean y: 2284021.0
[2025-10-13 11:33:23] 2025-10-13 15:32:41,809 | INFO     | -- intersect: -3105854155.5286536
[2025-10-13 11:33:23] 2025-10-13 15:32:41,809 | INFO     | intersect: -3105854155.5286536
[2025-10-13 11:33:23] 2025-10-13 15:32:41,810 | INFO     | chi2: 2.6628669901962
[2025-10-13 11:33:23] 2025-10-13 15:32:41,810 | INFO     | sum of square deviations: 620201325.2063484
[2025-10-13 11:33:23] 2025-10-13 15:32:41,811 | INFO     | sum of deviations: 2423818526.492066
[2025-10-13 11:33:23] 2025-10-13 15:32:41,811 | INFO     | mean x: 1760365398.6349206
[2025-10-13 11:33:23] 2025-10-13 15:32:41,811 | INFO     | mean y: 2286348.706349206
[2025-10-13 11:33:23] 2025-10-13 15:32:41,811 | INFO     | -- intersect: -6877425275.881512
[2025-10-13 11:33:23] 2025-10-13 15:32:41,811 | INFO     | intersect: -6877425275.881512
[2025-10-13 11:33:23] 2025-10-13 15:32:41,811 | INFO     | chi2: 2.664433373162159
[2025-10-13 11:33:23] 2025-10-13 15:32:41,811 | INFO     | current chi2=2.664433373162159 (change=-0.058823177114208404 %)
[2025-10-13 11:33:23] 2025-10-13 15:32:41,812 | INFO     | right removable region: 125
[2025-10-13 11:33:23] 2025-10-13 15:32:41,812 | INFO     | sum of square deviations: 620198092.9285725
[2025-10-13 11:33:23] 2025-10-13 15:32:41,813 | INFO     | sum of deviations: -24515538468.214287
[2025-10-13 11:33:23] 2025-10-13 15:32:41,813 | INFO     | mean x: 1760365703.642857
[2025-10-13 11:33:23] 2025-10-13 15:32:41,813 | INFO     | mean y: 2334657.1507936507
[2025-10-13 11:33:23] 2025-10-13 15:32:41,813 | INFO     | -- intersect: 69587058663.6334
[2025-10-13 11:33:23] 2025-10-13 15:32:41,813 | INFO     | intersect: 69587058663.6334
[2025-10-13 11:33:23] 2025-10-13 15:32:41,813 | INFO     | chi2: 0.43943110964618387
[2025-10-13 11:33:23] 2025-10-13 15:32:41,813 | INFO     | current chi2=0.43943110964618387 (change=83.49781978356317 %)
[2025-10-13 11:33:23] 2025-10-13 15:32:41,814 | INFO     | sum of square deviations: 549249876.6115724
[2025-10-13 11:33:23] 2025-10-13 15:32:41,814 | INFO     | sum of deviations: -27752457673.074383
[2025-10-13 11:33:23] 2025-10-13 15:32:41,814 | INFO     | mean x: 1760365856.1404958
[2025-10-13 11:33:23] 2025-10-13 15:32:41,814 | INFO     | mean y: 2341405.2396694217
[2025-10-13 11:33:23] 2025-10-13 15:32:41,815 | INFO     | -- intersect: 88949978886.84837
[2025-10-13 11:33:23] 2025-10-13 15:32:41,815 | INFO     | intersect: 88949978886.84837
[2025-10-13 11:33:23] 2025-10-13 15:32:41,815 | INFO     | chi2: 0.29724006625779986
[2025-10-13 11:33:23] 2025-10-13 15:32:41,815 | INFO     | current chi2=0.29724006625779986 (change=32.35798291633739 %)
[2025-10-13 11:33:23] 2025-10-13 15:32:41,815 | INFO     | sum of square deviations: 483929916.79310334
[2025-10-13 11:33:23] 2025-10-13 15:32:41,816 | INFO     | sum of deviations: -25302017063.362057
[2025-10-13 11:33:23] 2025-10-13 15:32:41,816 | INFO     | mean x: 1760366008.637931
[2025-10-13 11:33:23] 2025-10-13 15:32:41,816 | INFO     | mean y: 2335672.9913793104
[2025-10-13 11:33:23] 2025-10-13 15:32:41,816 | INFO     | -- intersect: 92042131607.66226
[2025-10-13 11:33:23] 2025-10-13 15:32:41,816 | INFO     | intersect: 92042131607.66226
[2025-10-13 11:33:23] 2025-10-13 15:32:41,816 | INFO     | chi2: 0.2932887705297862
[2025-10-13 11:33:23] 2025-10-13 15:32:41,817 | INFO     | current chi2=0.2932887705297862 (change=1.3293281009386753 %)
[2025-10-13 11:33:23] 2025-10-13 15:32:41,817 | INFO     | left removable region: 30
[2025-10-13 11:33:23] 2025-10-13 15:32:41,817 | INFO     | sum of square deviations: 265771528.63157895
[2025-10-13 11:33:23] 2025-10-13 15:32:41,817 | INFO     | sum of deviations: -12060960822.421047
[2025-10-13 11:33:23] 2025-10-13 15:32:41,817 | INFO     | mean x: 1760366283.1578948
[2025-10-13 11:33:23] 2025-10-13 15:32:41,818 | INFO     | mean y: 2306061.8947368423
[2025-10-13 11:33:23] 2025-10-13 15:32:41,818 | INFO     | -- intersect: 79889376296.98528
[2025-10-13 11:33:23] 2025-10-13 15:32:41,818 | INFO     | intersect: 79889376296.98528
[2025-10-13 11:33:23] 2025-10-13 15:32:41,818 | INFO     | chi2: 0.2629595116585766
[2025-10-13 11:33:23] 2025-10-13 15:32:41,818 | INFO     | -- intersect: 79889376296.98528
[2025-10-13 11:33:23] 2025-10-13 15:32:41,818 | INFO     | current memory leak: -45.38 B/s (using 95 data points, chi2=0.26)
[2025-10-13 11:33:23] 2025-10-13 15:32:41,819 | INFO     | could have reported an average CPU frequency of 2617 MHz (8 samples)
[2025-10-13 11:33:23] 2025-10-13 15:32:41,819 | INFO     | ..............................
[2025-10-13 11:33:23] 2025-10-13 15:32:41,819 | INFO     | . Timing measurements:
[2025-10-13 11:33:23] 2025-10-13 15:32:41,819 | INFO     | . get job = 0 s
[2025-10-13 11:33:23] 2025-10-13 15:32:41,819 | INFO     | . initial setup = 5 s
[2025-10-13 11:33:23] 2025-10-13 15:32:41,820 | INFO     | . payload setup = 24 s
[2025-10-13 11:33:23] 2025-10-13 15:32:41,820 | INFO     | . stage-in = 0 s
[2025-10-13 11:33:23] 2025-10-13 15:32:41,820 | INFO     | . payload execution = 7990 s
[2025-10-13 11:33:23] 2025-10-13 15:32:41,820 | INFO     | . stage-out = 1 s
[2025-10-13 11:33:23] 2025-10-13 15:32:41,820 | INFO     | . log creation = 0 s
[2025-10-13 11:33:23] 2025-10-13 15:32:41,820 | INFO     | ..............................
[2025-10-13 11:33:23] 2025-10-13 15:32:42,321 | INFO     | 
[2025-10-13 11:33:23] 2025-10-13 15:32:42,321 | INFO     | job summary report
[2025-10-13 11:33:23] 2025-10-13 15:32:42,321 | INFO     | --------------------------------------------------
[2025-10-13 11:33:23] 2025-10-13 15:32:42,321 | INFO     | PanDA job id: 6842902648
[2025-10-13 11:33:23] 2025-10-13 15:32:42,321 | INFO     | task id: 46676269
[2025-10-13 11:33:23] 2025-10-13 15:32:42,321 | INFO     | errors: (none)
[2025-10-13 11:33:23] 2025-10-13 15:32:42,322 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:33:23] 2025-10-13 15:32:42,322 | INFO     | pilot state: finished 
[2025-10-13 11:33:23] 2025-10-13 15:32:42,322 | INFO     | transexitcode: 0
[2025-10-13 11:33:23] 2025-10-13 15:32:42,322 | INFO     | exeerrorcode: 0
[2025-10-13 11:33:23] 2025-10-13 15:32:42,322 | INFO     | exeerrordiag: 
[2025-10-13 11:33:23] 2025-10-13 15:32:42,322 | INFO     | exitcode: 0
[2025-10-13 11:33:23] 2025-10-13 15:32:42,322 | INFO     | exitmsg: OK
[2025-10-13 11:33:23] 2025-10-13 15:32:42,322 | INFO     | cpuconsumptiontime: 49741 s
[2025-10-13 11:33:23] 2025-10-13 15:32:42,322 | INFO     | nevents: 400
[2025-10-13 11:33:23] 2025-10-13 15:32:42,323 | INFO     | neventsw: 0
[2025-10-13 11:33:23] 2025-10-13 15:32:42,323 | INFO     | pid: 778284
[2025-10-13 11:33:23] 2025-10-13 15:32:42,323 | INFO     | pgrp: 778284
[2025-10-13 11:33:23] 2025-10-13 15:32:42,323 | INFO     | corecount: 9
[2025-10-13 11:33:23] 2025-10-13 15:32:42,323 | INFO     | event service: False
[2025-10-13 11:33:23] 2025-10-13 15:32:42,323 | INFO     | sizes: {0: 2348635, 1: 2348834, 12: 2348834, 23: 2348862, 25: 2349152, 34: 2349180, 8017: 2377070, 8018: 2377069, 8019: 2386123, 8020: 2386179, 8025: 2386373}
[2025-10-13 11:33:23] 2025-10-13 15:32:42,323 | INFO     | --------------------------------------------------
[2025-10-13 11:33:23] 2025-10-13 15:32:42,323 | INFO     | 
[2025-10-13 11:33:23] 2025-10-13 15:32:42,323 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 11:33:23] 2025-10-13 15:32:42,350 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:33:23] 2025-10-13 15:32:42,351 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:33:23] 2025-10-13 15:32:42,351 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:33:23] 2025-10-13 15:32:42,351 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:33:23] 2025-10-13 15:32:42,351 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:33:23] 2025-10-13 15:32:42,351 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:33:23] 2025-10-13 15:32:42,351 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:33:23] 2025-10-13 15:32:42,351 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:33:23] 2025-10-13 15:32:42,351 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:33:23] 2025-10-13 15:32:42,352 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:33:23] 2025-10-13 15:32:42,352 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:33:23] 2025-10-13 15:32:42,352 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:33:23] 2025-10-13 15:32:42,352 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:33:23] 2025-10-13 15:32:42,352 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:33:23] 2025-10-13 15:32:42,352 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:33:23] 2025-10-13 15:32:42,352 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:33:23] 2025-10-13 15:32:42,352 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:33:23] 2025-10-13 15:32:42,352 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:33:23] 2025-10-13 15:32:42,353 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:33:23] 2025-10-13 15:32:42,353 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:33:23] 2025-10-13 15:32:42,353 | INFO     | job 6842902648 has completed (purged errors)
[2025-10-13 11:33:23] 2025-10-13 15:32:42,353 | INFO     | overall cleanup function is called
[2025-10-13 11:33:23] 2025-10-13 15:32:43,360 | INFO     | --- collectZombieJob: --- 10, [778284]
[2025-10-13 11:33:23] 2025-10-13 15:32:43,361 | INFO     | zombie collector waiting for pid 778284
[2025-10-13 11:33:23] 2025-10-13 15:32:43,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:33:23] 2025-10-13 15:32:43,361 | INFO     | collected zombie processes
[2025-10-13 11:33:23] 2025-10-13 15:32:43,362 | INFO     | will attempt to kill all subprocesses of pid=778284
[2025-10-13 11:33:23] 2025-10-13 15:32:43,662 | INFO     | process IDs to be killed: [778284] (in reverse order)
[2025-10-13 11:33:23] 2025-10-13 15:32:43,739 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:33:23] 2025-10-13 15:32:43,741 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:33:23] 2025-10-13 15:32:43,753 | INFO     | did not find any defunct processes belonging to 778284
[2025-10-13 11:33:23] 2025-10-13 15:32:43,765 | INFO     | did not find any defunct processes belonging to 778284
[2025-10-13 11:33:23] 2025-10-13 15:32:43,766 | INFO     | ready for new job
[2025-10-13 11:33:23] 2025-10-13 15:32:43,766 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:33:23] 2025-10-13 15:32:43,768 | INFO     | ***************************************
[2025-10-13 11:33:23] 2025-10-13 15:32:43,768 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:33:23] 2025-10-13 15:32:43,768 | INFO     | ***************************************
[2025-10-13 11:33:23] 2025-10-13 15:32:43,768 | INFO     | 
[2025-10-13 11:33:23] 2025-10-13 15:32:43,782 | INFO     | architecture information:
[2025-10-13 11:33:23] 2025-10-13 15:32:43,783 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:33:23] 2025-10-13 15:32:43,799 | INFO     | cat /etc/os-release:
[2025-10-13 11:33:23] NAME="CentOS Linux"
[2025-10-13 11:33:23] VERSION="7 (Core)"
[2025-10-13 11:33:23] ID="centos"
[2025-10-13 11:33:23] ID_LIKE="rhel fedora"
[2025-10-13 11:33:23] VERSION_ID="7"
[2025-10-13 11:33:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:33:23] ANSI_COLOR="0;31"
[2025-10-13 11:33:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:33:23] HOME_URL="https://www.centos.org/"
[2025-10-13 11:33:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:33:23] 
[2025-10-13 11:33:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:33:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:33:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:33:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:33:23] 
[2025-10-13 11:33:23] 2025-10-13 15:32:43,800 | INFO     | ***************************************
[2025-10-13 11:33:23] 2025-10-13 15:32:44,302 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 11:33:23] 2025-10-13 15:32:44,320 | INFO     | sufficient remaining disk space (76528222208 B)
[2025-10-13 11:33:23] 2025-10-13 15:32:44,321 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:33:23] 2025-10-13 15:32:44,321 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:33:23] 2025-10-13 15:32:44,321 | INFO     | update_server=False
[2025-10-13 11:33:23] 2025-10-13 15:32:44,321 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:33:23] 2025-10-13 15:32:44,321 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:33:23] 2025-10-13 15:32:44,632 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:33:23] 2025-10-13 15:32:45,080 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:33:23] 2025-10-13 15:32:45,080 | INFO     | aborting loop
[2025-10-13 11:33:23] 2025-10-13 15:32:45,280 | INFO     | all job control threads have been joined
[2025-10-13 11:33:23] 2025-10-13 15:32:45,289 | INFO     | all data control threads have been joined
[2025-10-13 11:33:23] 2025-10-13 15:32:45,325 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:33:23] 2025-10-13 15:32:45,443 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:33:23] 2025-10-13 15:32:45,534 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:33:23] 2025-10-13 15:32:45,537 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:33:23] 2025-10-13 15:32:45,575 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:33:23] 2025-10-13 15:32:45,582 | INFO     | all payload control threads have been joined
[2025-10-13 11:33:23] 2025-10-13 15:32:45,966 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:33:23] 2025-10-13 15:32:46,085 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:33:23] 2025-10-13 15:32:46,150 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:33:23] 2025-10-13 15:32:46,286 | INFO     | [job] control thread has finished
[2025-10-13 11:33:23] 2025-10-13 15:32:46,295 | INFO     | [data] control thread has finished
[2025-10-13 11:33:23] 2025-10-13 15:32:46,519 | INFO     | [job] validate thread has finished
[2025-10-13 11:33:23] 2025-10-13 15:32:46,588 | INFO     | [payload] control thread has finished
[2025-10-13 11:33:23] 2025-10-13 15:32:46,638 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:33:23] 2025-10-13 15:32:46,749 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:33:23] 2025-10-13 15:32:46,943 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:33:23] 2025-10-13 15:32:47,948 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:33:23] 2025-10-13 15:32:48,329 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:33:23] 2025-10-13 15:32:57,233 [wrapper] supervise_pilot (15 min periods counter: 10)
[2025-10-13 11:33:23] 2025-10-13 15:33:14,123 | INFO     | PID=770036 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 11:33:23] 2025-10-13 15:33:14,123 | INFO     | .. there are 16 such processes running
[2025-10-13 11:33:23] 2025-10-13 15:33:14,124 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:33:23] 2025-10-13 15:33:14,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:33:23] 2025-10-13 15:33:14,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:33:23] 2025-10-13 15:33:16,879 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:33:23] 2025-10-13 15:33:17,881 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140171848488768)>', '<ExcThread(monitor, started 140171215365888)>']
[2025-10-13 11:33:23] 2025-10-13 15:33:18,142 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:33:23] 2025-10-13 15:33:18,143 | INFO     | [monitor] control thread has ended
[2025-10-13 11:33:23] 2025-10-13 15:33:22,907 | INFO     | all workflow threads have been joined
[2025-10-13 11:33:23] 2025-10-13 15:33:22,907 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:33:23] 2025-10-13 15:33:22,907 | INFO     | traces error code: 0
[2025-10-13 11:33:23] 2025-10-13 15:33:22,908 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:33:23] 2025-10-13 15:33:23,120 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:33:23] 2025-10-13 15:33:23,123 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:33:23] 2025-10-13 15:33:23,126 [wrapper] pilotpid: 770036
[2025-10-13 11:33:23] 2025-10-13 15:33:23,129 [wrapper] Pilot exit status: 0
[2025-10-13 11:33:23] 2025-10-13 15:33:23,141 [wrapper] pandaids: 6842902648
[2025-10-13 11:33:23] 2025-10-13 15:33:23,200 [wrapper] cleanup supervisor_pilot 1133830 770037
[2025-10-13 11:33:23] 2025-10-13 15:33:23,204 [wrapper] Test setup, not cleaning
[2025-10-13 11:33:23] 2025-10-13 15:33:23,207 [wrapper] apfmon messages muted
[2025-10-13 11:33:23] 2025-10-13 15:33:23,210 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:33:23] 2025-10-13 15:33:23,213 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:33:23]  *** Error codes and diagnostics ***
[2025-10-13 11:33:23]     "exeErrorCode": 0,
[2025-10-13 11:33:23]     "exeErrorDiag": "",
[2025-10-13 11:33:23]     "pilotErrorCode": 0,
[2025-10-13 11:33:23]     "pilotErrorDiag": "",
[2025-10-13 11:33:23]  *** Listing of results directory ***
[2025-10-13 11:33:23] total 411596
[2025-10-13 11:33:23] -rw-r--r--. 1 boincer umatlas    557409 Oct 13 08:01 pilot3.tar.gz
[2025-10-13 11:33:23] -rw-r--r--. 1 boincer umatlas      5112 Oct 13 08:16 queuedata.json
[2025-10-13 11:33:23] -rwx------. 1 boincer umatlas     36292 Oct 13 08:17 runpilot2-wrapper.sh
[2025-10-13 11:33:23] -rw-r--r--. 1 boincer umatlas       100 Oct 13 09:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:33:23] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 09:17 run_atlas
[2025-10-13 11:33:23] -rw-r--r--. 1 boincer umatlas       105 Oct 13 09:17 job.xml
[2025-10-13 11:33:23] -rw-r--r--. 2 boincer umatlas 221715479 Oct 13 09:17 EVNT.46676267._003228.pool.root.1
[2025-10-13 11:33:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 09:17 start_atlas.sh
[2025-10-13 11:33:23] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 09:17 shared
[2025-10-13 11:33:23] -rw-r--r--. 2 boincer umatlas    569683 Oct 13 09:17 input.tar.gz
[2025-10-13 11:33:23] -rw-r--r--. 1 boincer umatlas         0 Oct 13 09:17 boinc_lockfile
[2025-10-13 11:33:23] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 09:17 pandaJob.out
[2025-10-13 11:33:23] -rw-------. 1 boincer umatlas    972489 Oct 13 09:17 agis_schedconf.cvmfs.json
[2025-10-13 11:33:23] -rw-------. 1 boincer umatlas   1560580 Oct 13 09:18 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:33:23] drwx------. 5 boincer umatlas      4096 Oct 13 09:18 pilot3
[2025-10-13 11:33:23] -rw-r--r--. 1 boincer umatlas      6658 Oct 13 11:31 init_data.xml
[2025-10-13 11:33:23] -rw-------. 1 boincer umatlas 192843296 Oct 13 11:31 HITS.46676269._096775.pool.root.1
[2025-10-13 11:33:23] -rw-r--r--. 1 boincer umatlas       530 Oct 13 11:32 boinc_task_state.xml
[2025-10-13 11:33:23] -rw-------. 1 boincer umatlas      1039 Oct 13 11:32 memory_monitor_summary.json
[2025-10-13 11:33:23] -rw-------. 1 boincer umatlas    381917 Oct 13 11:32 log.46676269._096775.job.log.tgz.1
[2025-10-13 11:33:23] -rw-------. 1 boincer umatlas      7821 Oct 13 11:32 heartbeat.json
[2025-10-13 11:33:23] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 11:32 boinc_mmap_file
[2025-10-13 11:33:23] -rw-r--r--. 1 boincer umatlas        27 Oct 13 11:33 wrapper_checkpoint.txt
[2025-10-13 11:33:23] -rw-------. 1 boincer umatlas        95 Oct 13 11:33 pilot_heartbeat.json
[2025-10-13 11:33:23] -rw-------. 1 boincer umatlas      4823 Oct 13 11:33 pilotlog.txt
[2025-10-13 11:33:23] -rw-------. 1 boincer umatlas   1126395 Oct 13 11:33 log.46676269._096775.job.log.1
[2025-10-13 11:33:23] -rw-------. 1 boincer umatlas       357 Oct 13 11:33 output.list
[2025-10-13 11:33:23] -rw-r--r--. 1 boincer umatlas       620 Oct 13 11:33 runtime_log
[2025-10-13 11:33:23] -rw-------. 1 boincer umatlas   1525760 Oct 13 11:33 result.tar.gz
[2025-10-13 11:33:23] -rw-------. 1 boincer umatlas       651 Oct 13 11:33 RMtKDmMfWS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWmmNDmv8jm5n.diag
[2025-10-13 11:33:23] -rw-r--r--. 1 boincer umatlas      8693 Oct 13 11:33 runtime_log.err
[2025-10-13 11:33:23] -rw-r--r--. 1 boincer umatlas     21002 Oct 13 11:33 stderr.txt
[2025-10-13 11:33:23] HITS file was successfully produced:
[2025-10-13 11:33:23] -rw-------. 1 boincer umatlas 192843296 Oct 13 11:31 shared/HITS.pool.root.1
[2025-10-13 11:33:23]  *** Contents of shared directory: ***
[2025-10-13 11:33:23] total 406920
[2025-10-13 11:33:23] -rw-r--r--. 2 boincer umatlas 221715479 Oct 13 09:17 ATLAS.root_0
[2025-10-13 11:33:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 09:17 start_atlas.sh
[2025-10-13 11:33:23] -rw-r--r--. 2 boincer umatlas    569683 Oct 13 09:17 input.tar.gz
[2025-10-13 11:33:23] -rw-------. 1 boincer umatlas 192843296 Oct 13 11:31 HITS.pool.root.1
[2025-10-13 11:33:23] -rw-------. 1 boincer umatlas   1525760 Oct 13 11:33 result.tar.gz
11:33:24 (765836): run_atlas exited; CPU time 49892.557713
11:33:24 (765836): called boinc_finish(0)

</stderr_txt>
]]>

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