Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:12:09 (1169069): wrapper (7.7.26015): starting
08:12:09 (1169069): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 08:12:09] Arguments: --nthreads 9
[2025-10-13 08:12:09] Threads: 9
[2025-10-13 08:12:09] Checking for CVMFS
[2025-10-13 08:12:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 08:12:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 08:12:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 08:12:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 08:12:11] 2.13.2.0 709547 78807 383380 151660 3 650 30584748 32935937 33785 16776704 0 546245524 99.705 404257564 17460 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 08:12:11] CVMFS is ok
[2025-10-13 08:12:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 08:12:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 08:12:11] Further information can be found at the LHC@home message board.
[2025-10-13 08:12:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 08:12:11] Checking for apptainer binary...
[2025-10-13 08:12:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 08:12:11] Running /usr/bin/apptainer --version
[2025-10-13 08:12:12] apptainer version 1.4.3-1.el9
[2025-10-13 08:12:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 08:12:12] c7-2-37.aglt2.org
[2025-10-13 08:12:12] apptainer works
[2025-10-13 08:12:12] Set ATHENA_PROC_NUMBER=9
[2025-10-13 08:12:12] Set ATHENA_CORE_NUMBER=9
[2025-10-13 08:12:12] Starting ATLAS job with PandaID=6830895359
[2025-10-13 08:12:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:00:14 (1911648): wrapper (7.7.26015): starting
10:00:14 (1911648): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 10:00:14] Arguments: --nthreads 9
[2025-10-13 10:00:14] Threads: 9
[2025-10-13 10:00:14] This job has been restarted, cleaning up previous attempt
[2025-10-13 10:00:15] Checking for CVMFS
[2025-10-13 10:00:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:00:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:00:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:00:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:00:15] 2.13.2.0 709547 78915 386320 151662 3 596 18841029 32935937 32439 16776704 0 547141309 99.705 405241002 17429 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 10:00:15] CVMFS is ok
[2025-10-13 10:00:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 10:00:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 10:00:15] Further information can be found at the LHC@home message board.
[2025-10-13 10:00:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:00:15] Checking for apptainer binary...
[2025-10-13 10:00:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 10:00:15] Running /usr/bin/apptainer --version
[2025-10-13 10:00:15] apptainer version 1.4.3-1.el9
[2025-10-13 10:00:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:00:15] c7-2-37.aglt2.org
[2025-10-13 10:00:15] apptainer works
[2025-10-13 10:00:15] Set ATHENA_PROC_NUMBER=9
[2025-10-13 10:00:15] Set ATHENA_CORE_NUMBER=9
[2025-10-13 10:00:15] Starting ATLAS job with PandaID=6830895359
[2025-10-13 10:00:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:24:54]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:24:54] 2025-10-13 16:24:20,561 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 12:24:54] 2025-10-13 16:24:20,562 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 12:24:54] 2025-10-13 16:24:20,562 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 12:24:54] 2025-10-13 16:24:20,564 | INFO     | fitting pss+swap vs Time
[2025-10-13 12:24:54] 2025-10-13 16:24:20,565 | INFO     | sum of square deviations: 869188390.0
[2025-10-13 12:24:54] 2025-10-13 16:24:20,565 | INFO     | sum of deviations: 7654750797.999997
[2025-10-13 12:24:54] 2025-10-13 16:24:20,565 | INFO     | mean x: 1760368321.0
[2025-10-13 12:24:54] 2025-10-13 16:24:20,565 | INFO     | mean y: 2169444.085106383
[2025-10-13 12:24:54] 2025-10-13 16:24:20,565 | INFO     | -- intersect: -15501006812.041214
[2025-10-13 12:24:54] 2025-10-13 16:24:20,565 | INFO     | intersect: -15501006812.041214
[2025-10-13 12:24:54] 2025-10-13 16:24:20,566 | INFO     | chi2: 1.9288924010839756
[2025-10-13 12:24:54] 2025-10-13 16:24:20,566 | INFO     | sum of square deviations: 779958810.0
[2025-10-13 12:24:54] 2025-10-13 16:24:20,566 | INFO     | sum of deviations: 15186986572.999998
[2025-10-13 12:24:54] 2025-10-13 16:24:20,566 | INFO     | mean x: 1760368168.5
[2025-10-13 12:24:54] 2025-10-13 16:24:20,566 | INFO     | mean y: 2181946.1911764704
[2025-10-13 12:24:54] 2025-10-13 16:24:20,567 | INFO     | -- intersect: -34274868836.203472
[2025-10-13 12:24:54] 2025-10-13 16:24:20,567 | INFO     | intersect: -34274868836.203472
[2025-10-13 12:24:54] 2025-10-13 16:24:20,567 | INFO     | chi2: 1.2629822135249162
[2025-10-13 12:24:54] 2025-10-13 16:24:20,567 | INFO     | current chi2=1.2629822135249162 (change=34.522930733971435 %)
[2025-10-13 12:24:54] 2025-10-13 16:24:20,567 | INFO     | sum of square deviations: 697054930.0
[2025-10-13 12:24:54] 2025-10-13 16:24:20,568 | INFO     | sum of deviations: 14698884093.0
[2025-10-13 12:24:54] 2025-10-13 16:24:20,568 | INFO     | mean x: 1760368016.0
[2025-10-13 12:24:54] 2025-10-13 16:24:20,568 | INFO     | mean y: 2181027.8015267174
[2025-10-13 12:24:54] 2025-10-13 16:24:20,568 | INFO     | -- intersect: -37118918493.30561
[2025-10-13 12:24:54] 2025-10-13 16:24:20,568 | INFO     | intersect: -37118918493.30561
[2025-10-13 12:24:54] 2025-10-13 16:24:20,568 | INFO     | chi2: 1.2621376722959483
[2025-10-13 12:24:54] 2025-10-13 16:24:20,568 | INFO     | current chi2=1.2621376722959483 (change=0.06686881413878842 %)
[2025-10-13 12:24:54] 2025-10-13 16:24:20,568 | INFO     | right removable region: 130
[2025-10-13 12:24:54] 2025-10-13 16:24:20,568 | INFO     | sum of square deviations: 779958810.0
[2025-10-13 12:24:54] 2025-10-13 16:24:20,569 | INFO     | sum of deviations: -7759643195.5
[2025-10-13 12:24:54] 2025-10-13 16:24:20,569 | INFO     | mean x: 1760368473.5
[2025-10-13 12:24:54] 2025-10-13 16:24:20,569 | INFO     | mean y: 2195288.286764706
[2025-10-13 12:24:54] 2025-10-13 16:24:20,569 | INFO     | -- intersect: 17515724300.116245
[2025-10-13 12:24:54] 2025-10-13 16:24:20,569 | INFO     | intersect: 17515724300.116245
[2025-10-13 12:24:54] 2025-10-13 16:24:20,569 | INFO     | chi2: 0.7372383534410849
[2025-10-13 12:24:54] 2025-10-13 16:24:20,569 | INFO     | current chi2=0.7372383534410849 (change=61.779187215068056 %)
[2025-10-13 12:24:54] 2025-10-13 16:24:20,570 | INFO     | sum of square deviations: 697054930.0
[2025-10-13 12:24:54] 2025-10-13 16:24:20,570 | INFO     | sum of deviations: -7000796028.0
[2025-10-13 12:24:54] 2025-10-13 16:24:20,570 | INFO     | mean x: 1760368626.0
[2025-10-13 12:24:54] 2025-10-13 16:24:20,570 | INFO     | mean y: 2193928.9694656488
[2025-10-13 12:24:54] 2025-10-13 16:24:20,570 | INFO     | -- intersect: 17682266408.6471
[2025-10-13 12:24:54] 2025-10-13 16:24:20,570 | INFO     | intersect: 17682266408.6471
[2025-10-13 12:24:54] 2025-10-13 16:24:20,571 | INFO     | chi2: 0.7290324979752255
[2025-10-13 12:24:54] 2025-10-13 16:24:20,571 | INFO     | current chi2=0.7290324979752255 (change=1.1130532517140872 %)
[2025-10-13 12:24:54] 2025-10-13 16:24:20,571 | INFO     | left removable region: 20
[2025-10-13 12:24:54] 2025-10-13 16:24:20,571 | INFO     | sum of square deviations: 412686807.5
[2025-10-13 12:24:54] 2025-10-13 16:24:20,571 | INFO     | sum of deviations: 469787778.9999998
[2025-10-13 12:24:54] 2025-10-13 16:24:20,571 | INFO     | mean x: 1760368595.5
[2025-10-13 12:24:54] 2025-10-13 16:24:20,571 | INFO     | mean y: 2208085.7636363637
[2025-10-13 12:24:54] 2025-10-13 16:24:20,571 | INFO     | -- intersect: -2001732039.4638805
[2025-10-13 12:24:54] 2025-10-13 16:24:20,571 | INFO     | intersect: -2001732039.4638805
[2025-10-13 12:24:54] 2025-10-13 16:24:20,572 | INFO     | chi2: 0.03941341897104053
[2025-10-13 12:24:54] 2025-10-13 16:24:20,572 | INFO     | -- intersect: -2001732039.4638805
[2025-10-13 12:24:54] 2025-10-13 16:24:20,572 | INFO     | current memory leak: 1.14 B/s (using 110 data points, chi2=0.04)
[2025-10-13 12:24:54] 2025-10-13 16:24:20,572 | INFO     | could have reported an average CPU frequency of 3194 MHz (8 samples)
[2025-10-13 12:24:54] 2025-10-13 16:24:20,572 | INFO     | ..............................
[2025-10-13 12:24:54] 2025-10-13 16:24:20,572 | INFO     | . Timing measurements:
[2025-10-13 12:24:54] 2025-10-13 16:24:20,573 | INFO     | . get job = 0 s
[2025-10-13 12:24:54] 2025-10-13 16:24:20,573 | INFO     | . initial setup = 1 s
[2025-10-13 12:24:54] 2025-10-13 16:24:20,573 | INFO     | . payload setup = 5 s
[2025-10-13 12:24:54] 2025-10-13 16:24:20,573 | INFO     | . stage-in = 0 s
[2025-10-13 12:24:54] 2025-10-13 16:24:20,573 | INFO     | . payload execution = 8583 s
[2025-10-13 12:24:54] 2025-10-13 16:24:20,573 | INFO     | . stage-out = 4 s
[2025-10-13 12:24:54] 2025-10-13 16:24:20,573 | INFO     | . log creation = 0 s
[2025-10-13 12:24:54] 2025-10-13 16:24:20,573 | INFO     | ..............................
[2025-10-13 12:24:54] 2025-10-13 16:24:21,099 | INFO     | 
[2025-10-13 12:24:54] 2025-10-13 16:24:21,111 | INFO     | job summary report
[2025-10-13 12:24:54] 2025-10-13 16:24:21,112 | INFO     | --------------------------------------------------
[2025-10-13 12:24:54] 2025-10-13 16:24:21,112 | INFO     | PanDA job id: 6830895359
[2025-10-13 12:24:54] 2025-10-13 16:24:21,112 | INFO     | task id: 46376905
[2025-10-13 12:24:54] 2025-10-13 16:24:21,112 | INFO     | errors: (none)
[2025-10-13 12:24:54] 2025-10-13 16:24:21,114 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 12:24:54] 2025-10-13 16:24:21,114 | INFO     | pilot state: finished 
[2025-10-13 12:24:54] 2025-10-13 16:24:21,114 | INFO     | transexitcode: 0
[2025-10-13 12:24:54] 2025-10-13 16:24:21,114 | INFO     | exeerrorcode: 0
[2025-10-13 12:24:54] 2025-10-13 16:24:21,115 | INFO     | exeerrordiag: 
[2025-10-13 12:24:54] 2025-10-13 16:24:21,115 | INFO     | exitcode: 0
[2025-10-13 12:24:54] 2025-10-13 16:24:21,115 | INFO     | exitmsg: OK
[2025-10-13 12:24:54] 2025-10-13 16:24:21,115 | INFO     | cpuconsumptiontime: 28869 s
[2025-10-13 12:24:54] 2025-10-13 16:24:21,115 | INFO     | nevents: 400
[2025-10-13 12:24:54] 2025-10-13 16:24:21,115 | INFO     | neventsw: 0
[2025-10-13 12:24:54] 2025-10-13 16:24:21,115 | INFO     | pid: 1933766
[2025-10-13 12:24:54] 2025-10-13 16:24:21,115 | INFO     | pgrp: 1933766
[2025-10-13 12:24:54] 2025-10-13 16:24:21,117 | INFO     | corecount: 9
[2025-10-13 12:24:54] 2025-10-13 16:24:21,117 | INFO     | event service: False
[2025-10-13 12:24:54] 2025-10-13 16:24:21,117 | INFO     | sizes: {0: 2348645, 1: 2348844, 5: 2349106, 11: 2349162, 8594: 2377540, 8599: 2386538, 8601: 2386722, 8621: 2386916}
[2025-10-13 12:24:54] 2025-10-13 16:24:21,117 | INFO     | --------------------------------------------------
[2025-10-13 12:24:54] 2025-10-13 16:24:21,117 | INFO     | 
[2025-10-13 12:24:54] 2025-10-13 16:24:21,118 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 12:24:54] 2025-10-13 16:24:21,155 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 12:24:54] 2025-10-13 16:24:21,156 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 12:24:54] 2025-10-13 16:24:21,156 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 12:24:54] 2025-10-13 16:24:21,156 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 12:24:54] 2025-10-13 16:24:21,156 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 12:24:54] 2025-10-13 16:24:21,156 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 12:24:54] 2025-10-13 16:24:21,156 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 12:24:54] 2025-10-13 16:24:21,157 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 12:24:54] 2025-10-13 16:24:21,157 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 12:24:54] 2025-10-13 16:24:21,157 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 12:24:54] 2025-10-13 16:24:21,157 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 12:24:54] 2025-10-13 16:24:21,157 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 12:24:54] 2025-10-13 16:24:21,157 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 12:24:54] 2025-10-13 16:24:21,157 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 12:24:54] 2025-10-13 16:24:21,157 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 12:24:54] 2025-10-13 16:24:21,157 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 12:24:54] 2025-10-13 16:24:21,157 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 12:24:54] 2025-10-13 16:24:21,157 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 12:24:54] 2025-10-13 16:24:21,158 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 12:24:54] 2025-10-13 16:24:21,158 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 12:24:54] 2025-10-13 16:24:21,158 | INFO     | job 6830895359 has completed (purged errors)
[2025-10-13 12:24:54] 2025-10-13 16:24:21,158 | INFO     | overall cleanup function is called
[2025-10-13 12:24:54] 2025-10-13 16:24:22,176 | INFO     | --- collectZombieJob: --- 10, [1933766]
[2025-10-13 12:24:54] 2025-10-13 16:24:22,176 | INFO     | zombie collector waiting for pid 1933766
[2025-10-13 12:24:54] 2025-10-13 16:24:22,176 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 12:24:54] 2025-10-13 16:24:22,176 | INFO     | collected zombie processes
[2025-10-13 12:24:54] 2025-10-13 16:24:22,177 | INFO     | will attempt to kill all subprocesses of pid=1933766
[2025-10-13 12:24:54] 2025-10-13 16:24:22,771 | INFO     | process IDs to be killed: [1933766] (in reverse order)
[2025-10-13 12:24:54] 2025-10-13 16:24:22,976 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 12:24:54] 2025-10-13 16:24:22,978 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 12:24:54] 2025-10-13 16:24:23,020 | INFO     | did not find any defunct processes belonging to 1933766
[2025-10-13 12:24:54] 2025-10-13 16:24:23,042 | INFO     | did not find any defunct processes belonging to 1933766
[2025-10-13 12:24:54] 2025-10-13 16:24:23,042 | INFO     | ready for new job
[2025-10-13 12:24:54] 2025-10-13 16:24:23,042 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 12:24:54] 2025-10-13 16:24:23,044 | INFO     | ***************************************
[2025-10-13 12:24:54] 2025-10-13 16:24:23,044 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 12:24:54] 2025-10-13 16:24:23,044 | INFO     | ***************************************
[2025-10-13 12:24:54] 2025-10-13 16:24:23,044 | INFO     | 
[2025-10-13 12:24:54] 2025-10-13 16:24:23,069 | INFO     | architecture information:
[2025-10-13 12:24:54] 2025-10-13 16:24:23,070 | INFO     | executing command: cat /etc/os-release
[2025-10-13 12:24:54] 2025-10-13 16:24:23,091 | INFO     | cat /etc/os-release:
[2025-10-13 12:24:54] NAME="CentOS Linux"
[2025-10-13 12:24:54] VERSION="7 (Core)"
[2025-10-13 12:24:54] ID="centos"
[2025-10-13 12:24:54] ID_LIKE="rhel fedora"
[2025-10-13 12:24:54] VERSION_ID="7"
[2025-10-13 12:24:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:24:54] ANSI_COLOR="0;31"
[2025-10-13 12:24:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:24:54] HOME_URL="https://www.centos.org/"
[2025-10-13 12:24:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:24:54] 
[2025-10-13 12:24:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:24:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:24:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:24:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:24:54] 
[2025-10-13 12:24:54] 2025-10-13 16:24:23,092 | INFO     | ***************************************
[2025-10-13 12:24:54] 2025-10-13 16:24:23,595 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 12:24:54] 2025-10-13 16:24:23,685 | INFO     | sufficient remaining disk space (76051120128 B)
[2025-10-13 12:24:54] 2025-10-13 16:24:23,686 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:24:54] 2025-10-13 16:24:23,686 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:24:54] 2025-10-13 16:24:23,686 | INFO     | update_server=False
[2025-10-13 12:24:54] 2025-10-13 16:24:23,687 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:24:54] 2025-10-13 16:24:23,896 | INFO     | all payload control threads have been joined
[2025-10-13 12:24:54] 2025-10-13 16:24:24,253 | INFO     | all data control threads have been joined
[2025-10-13 12:24:54] 2025-10-13 16:24:24,434 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:24:54] 2025-10-13 16:24:24,437 | INFO     | aborting loop
[2025-10-13 12:24:54] 2025-10-13 16:24:24,689 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:24:54] 2025-10-13 16:24:24,691 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:24:54] 2025-10-13 16:24:24,819 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:24:54] 2025-10-13 16:24:24,902 | INFO     | [payload] control thread has finished
[2025-10-13 12:24:54] 2025-10-13 16:24:25,050 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:24:54] 2025-10-13 16:24:25,109 | INFO     | all job control threads have been joined
[2025-10-13 12:24:54] 2025-10-13 16:24:25,118 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:24:54] 2025-10-13 16:24:25,192 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:24:54] 2025-10-13 16:24:25,207 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:24:54] 2025-10-13 16:24:25,238 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:24:54] 2025-10-13 16:24:25,259 | INFO     | [data] control thread has finished
[2025-10-13 12:24:54] 2025-10-13 16:24:25,312 | INFO     | [job] validate thread has finished
[2025-10-13 12:24:54] 2025-10-13 16:24:25,414 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:24:54] 2025-10-13 16:24:25,444 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:24:54] 2025-10-13 16:24:25,663 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:24:54] 2025-10-13 16:24:25,672 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:24:54] 2025-10-13 16:24:26,120 | INFO     | [job] control thread has finished
[2025-10-13 12:24:54] 2025-10-13 16:24:26,669 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:24:54] 2025-10-13 16:24:26,696 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:24:54] 2025-10-13 16:24:28,837 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:24:54] 2025-10-13 16:24:39,502 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:24:54] 2025-10-13 16:24:39,791 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140418728851264)>', '<ExcThread(monitor, started 140418100483840)>']
[2025-10-13 12:24:54] 2025-10-13 16:24:44,816 | INFO     | all workflow threads have been joined
[2025-10-13 12:24:54] 2025-10-13 16:24:44,816 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:24:54] 2025-10-13 16:24:44,817 | INFO     | traces error code: 0
[2025-10-13 12:24:54] 2025-10-13 16:24:44,817 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:24:54] 2025-10-13 16:24:54,217 | INFO     | PID=1919591 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 12:24:54] 2025-10-13 16:24:54,218 | INFO     | .. there are 37 such processes running
[2025-10-13 12:24:54] 2025-10-13 16:24:54,219 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:24:54] 2025-10-13 16:24:54,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:24:54] 2025-10-13 16:24:54,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:24:54] 2025-10-13 16:24:54,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:24:54] 2025-10-13 16:24:54,219 | INFO     | [monitor] control thread has ended
[2025-10-13 12:24:54] 2025-10-13 16:24:54,418 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:24:54] 2025-10-13 16:24:54,424 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:24:54] 2025-10-13 16:24:54,427 [wrapper] pilotpid: 1919591
[2025-10-13 12:24:54] 2025-10-13 16:24:54,429 [wrapper] Pilot exit status: 0
[2025-10-13 12:24:54] 2025-10-13 16:24:54,454 [wrapper] pandaids: 6830895359 6830895359
[2025-10-13 12:24:54] 2025-10-13 16:24:54,572 [wrapper] cleanup supervisor_pilot 2605989 1919592
[2025-10-13 12:24:54] 2025-10-13 16:24:54,585 [wrapper] Test setup, not cleaning
[2025-10-13 12:24:54] 2025-10-13 16:24:54,610 [wrapper] apfmon messages muted
[2025-10-13 12:24:54] 2025-10-13 16:24:54,612 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:24:54] 2025-10-13 16:24:54,614 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:24:54]  *** Error codes and diagnostics ***
[2025-10-13 12:24:54]     "exeErrorCode": 0,
[2025-10-13 12:24:54]     "exeErrorDiag": "",
[2025-10-13 12:24:54]     "pilotErrorCode": 0,
[2025-10-13 12:24:54]     "pilotErrorDiag": "",
[2025-10-13 12:24:54]  *** Listing of results directory ***
[2025-10-13 12:24:54] total 597444
[2025-10-13 12:24:54] drwx------. 4 boincer umatlas      4096 Jul 31 09:00 pilot3
[2025-10-13 12:24:54] -rw-r--r--. 1 boincer umatlas    552446 Oct  5 00:22 pilot3.tar.gz
[2025-10-13 12:24:54] -rw-r--r--. 1 boincer umatlas      5112 Oct  5 00:28 queuedata.json
[2025-10-13 12:24:54] -rwx------. 1 boincer umatlas     36292 Oct  5 00:29 runpilot2-wrapper.sh
[2025-10-13 12:24:54] -rw-r--r--. 1 boincer umatlas       100 Oct 13 08:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:24:54] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 08:12 run_atlas
[2025-10-13 12:24:54] -rw-r--r--. 1 boincer umatlas       105 Oct 13 08:12 job.xml
[2025-10-13 12:24:54] -rw-r--r--. 3 boincer umatlas 213262942 Oct 13 08:12 EVNT.46376901._002781.pool.root.1
[2025-10-13 12:24:54] -rw-r--r--. 3 boincer umatlas 213262942 Oct 13 08:12 ATLAS.root_0
[2025-10-13 12:24:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 08:12 start_atlas.sh
[2025-10-13 12:24:54] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 08:12 shared
[2025-10-13 12:24:54] -rw-r--r--. 2 boincer umatlas    565606 Oct 13 08:12 input.tar.gz
[2025-10-13 12:24:54] -rw-r--r--. 1 boincer umatlas         0 Oct 13 08:12 boinc_lockfile
[2025-10-13 12:24:54] -rw-r--r--. 1 boincer umatlas      2519 Oct 13 10:00 pandaJob.out
[2025-10-13 12:24:54] -rw-------. 1 boincer umatlas    972489 Oct 13 10:00 agis_schedconf.cvmfs.json
[2025-10-13 12:24:54] -rw-r--r--. 1 boincer umatlas      6935 Oct 13 12:18 init_data.xml
[2025-10-13 12:24:54] -rw-------. 1 boincer umatlas 178191802 Oct 13 12:22 HITS.46376905._076192.pool.root.1
[2025-10-13 12:24:54] -rw-r--r--. 1 boincer umatlas       531 Oct 13 12:22 boinc_task_state.xml
[2025-10-13 12:24:54] -rw-------. 1 boincer umatlas      1051 Oct 13 12:23 memory_monitor_summary.json
[2025-10-13 12:24:54] -rw-------. 1 boincer umatlas   1560580 Oct 13 12:23 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:24:54] -rw-------. 1 boincer umatlas    405620 Oct 13 12:23 log.46376905._076192.job.log.tgz.1
[2025-10-13 12:24:54] -rw-------. 1 boincer umatlas      7805 Oct 13 12:24 heartbeat.json
[2025-10-13 12:24:54] -rw-r--r--. 1 boincer umatlas        28 Oct 13 12:24 wrapper_checkpoint.txt
[2025-10-13 12:24:54] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 12:24 boinc_mmap_file
[2025-10-13 12:24:54] -rw-------. 1 boincer umatlas        95 Oct 13 12:24 pilot_heartbeat.json
[2025-10-13 12:24:54] -rw-------. 1 boincer umatlas       823 Oct 13 12:24 pilotlog.txt
[2025-10-13 12:24:54] -rw-------. 1 boincer umatlas   1183710 Oct 13 12:24 log.46376905._076192.job.log.1
[2025-10-13 12:24:54] -rw-------. 1 boincer umatlas       357 Oct 13 12:24 output.list
[2025-10-13 12:24:54] -rw-r--r--. 1 boincer umatlas       620 Oct 13 12:24 runtime_log
[2025-10-13 12:24:54] -rw-------. 1 boincer umatlas   1607680 Oct 13 12:24 result.tar.gz
[2025-10-13 12:24:54] -rw-r--r--. 1 boincer umatlas      8783 Oct 13 12:24 runtime_log.err
[2025-10-13 12:24:54] -rw-------. 1 boincer umatlas       782 Oct 13 12:24 JBCNDmGYVP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmq5NNDmPY8Wgn.diag
[2025-10-13 12:24:54] -rw-r--r--. 1 boincer umatlas     23067 Oct 13 12:24 stderr.txt
[2025-10-13 12:24:54] HITS file was successfully produced:
[2025-10-13 12:24:54] -rw-------. 1 boincer umatlas 178191802 Oct 13 12:22 shared/HITS.pool.root.1
[2025-10-13 12:24:54]  *** Contents of shared directory: ***
[2025-10-13 12:24:54] total 384432
[2025-10-13 12:24:54] -rw-r--r--. 3 boincer umatlas 213262942 Oct 13 08:12 ATLAS.root_0
[2025-10-13 12:24:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 08:12 start_atlas.sh
[2025-10-13 12:24:54] -rw-r--r--. 2 boincer umatlas    565606 Oct 13 08:12 input.tar.gz
[2025-10-13 12:24:54] -rw-------. 1 boincer umatlas 178191802 Oct 13 12:22 HITS.pool.root.1
[2025-10-13 12:24:54] -rw-------. 1 boincer umatlas   1607680 Oct 13 12:24 result.tar.gz
12:24:56 (1911648): run_atlas exited; CPU time 29247.279739
12:24:56 (1911648): called boinc_finish(0)

</stderr_txt>
]]>

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