Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:00:28 (1975333): wrapper (7.7.26015): starting
08:00:28 (1975333): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 08:00:28] Arguments: --nthreads 8
[2025-10-13 08:00:28] Threads: 8
[2025-10-13 08:00:28] Checking for CVMFS
[2025-10-13 08:00:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 08:00:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 08:00:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 08:00:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 08:00:30] 2.13.2.0 981271 130675 271656 151660 2 468 32231093 32935936 15821 16776704 0 107684440 99.688 85111479 29592 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 08:00:30] CVMFS is ok
[2025-10-13 08:00:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 08:00:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 08:00:30] Further information can be found at the LHC@home message board.
[2025-10-13 08:00:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 08:00:30] Checking for apptainer binary...
[2025-10-13 08:00:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 08:00:30] Running /usr/bin/apptainer --version
[2025-10-13 08:00:30] apptainer version 1.4.3-1.el9
[2025-10-13 08:00:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 08:00:31] c-4-36.aglt2.org
[2025-10-13 08:00:31] apptainer works
[2025-10-13 08:00:31] Set ATHENA_PROC_NUMBER=8
[2025-10-13 08:00:31] Set ATHENA_CORE_NUMBER=8
[2025-10-13 08:00:31] Starting ATLAS job with PandaID=6837328782
[2025-10-13 08:00:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 14:10:18]  *** The last 200 lines of the pilot log: ***
[2025-10-13 14:10:18] 2025-10-13 18:09:23,883 | INFO     | time since job start (22070s) is within the limit (172800.0s)
[2025-10-13 14:10:18] 2025-10-13 18:09:24,063 | INFO     | monitor loop #1380: job 0:6837328782 is in state 'finished'
[2025-10-13 14:10:18] 2025-10-13 18:09:24,063 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:10:18] 2025-10-13 18:09:24,556 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 14:10:18] 2025-10-13 18:09:24,563 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2700.1484999999993
[2025-10-13 14:10:18] 2025-10-13 18:09:24,570 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837328782/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 14:10:18] 2025-10-13 18:09:24,571 | INFO     | extracted standard info from prmon json
[2025-10-13 14:10:18] 2025-10-13 18:09:24,571 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 14:10:18] 2025-10-13 18:09:24,571 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 14:10:18] 2025-10-13 18:09:24,571 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 14:10:18] 2025-10-13 18:09:24,572 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 14:10:18] 2025-10-13 18:09:24,579 | INFO     | fitting pss+swap vs Time
[2025-10-13 14:10:18] 2025-10-13 18:09:24,579 | INFO     | sum of square deviations: 14467687069.988815
[2025-10-13 14:10:18] 2025-10-13 18:09:24,583 | INFO     | sum of deviations: 66531608495.48333
[2025-10-13 14:10:18] 2025-10-13 18:09:24,584 | INFO     | mean x: 1760367980.9944444
[2025-10-13 14:10:18] 2025-10-13 18:09:24,584 | INFO     | mean y: 2091873.2416666667
[2025-10-13 14:10:18] 2025-10-13 18:09:24,584 | INFO     | -- intersect: -8093197494.915599
[2025-10-13 14:10:18] 2025-10-13 18:09:24,584 | INFO     | intersect: -8093197494.915599
[2025-10-13 14:10:18] 2025-10-13 18:09:24,585 | INFO     | chi2: 2.778863409697474
[2025-10-13 14:10:18] 2025-10-13 18:09:24,585 | INFO     | sum of square deviations: 13873274398.749289
[2025-10-13 14:10:18] 2025-10-13 18:09:24,589 | INFO     | sum of deviations: 81811855267.6789
[2025-10-13 14:10:18] 2025-10-13 18:09:24,589 | INFO     | mean x: 1760367828.5014083
[2025-10-13 14:10:18] 2025-10-13 18:09:24,589 | INFO     | mean y: 2095733.6422535211
[2025-10-13 14:10:18] 2025-10-13 18:09:24,590 | INFO     | -- intersect: -10378940052.416954
[2025-10-13 14:10:18] 2025-10-13 18:09:24,590 | INFO     | intersect: -10378940052.416954
[2025-10-13 14:10:18] 2025-10-13 18:09:24,590 | INFO     | chi2: 2.1150546548066496
[2025-10-13 14:10:18] 2025-10-13 18:09:24,590 | INFO     | current chi2=2.1150546548066496 (change=23.887779175266886 %)
[2025-10-13 14:10:18] 2025-10-13 18:09:24,591 | INFO     | right removable region: 354
[2025-10-13 14:10:18] 2025-10-13 18:09:24,591 | INFO     | sum of square deviations: 13873165818.749264
[2025-10-13 14:10:18] 2025-10-13 18:09:24,595 | INFO     | sum of deviations: 7101823012.535221
[2025-10-13 14:10:18] 2025-10-13 18:09:24,595 | INFO     | mean x: 1760368133.5014083
[2025-10-13 14:10:18] 2025-10-13 18:09:24,596 | INFO     | mean y: 2107051.9295774647
[2025-10-13 14:10:18] 2025-10-13 18:09:24,596 | INFO     | -- intersect: -899044356.7948862
[2025-10-13 14:10:18] 2025-10-13 18:09:24,596 | INFO     | intersect: -899044356.7948862
[2025-10-13 14:10:18] 2025-10-13 18:09:24,597 | INFO     | chi2: 0.982116045254819
[2025-10-13 14:10:18] 2025-10-13 18:09:24,597 | INFO     | current chi2=0.982116045254819 (change=64.6576351386145 %)
[2025-10-13 14:10:18] 2025-10-13 18:09:24,597 | INFO     | sum of square deviations: 13295199570.99721
[2025-10-13 14:10:18] 2025-10-13 18:09:24,601 | INFO     | sum of deviations: 11200385446.305698
[2025-10-13 14:10:18] 2025-10-13 18:09:24,601 | INFO     | mean x: 1760368286.0028572
[2025-10-13 14:10:18] 2025-10-13 18:09:24,601 | INFO     | mean y: 2105946.694285714
[2025-10-13 14:10:18] 2025-10-13 18:09:24,601 | INFO     | -- intersect: -1480895735.6344023
[2025-10-13 14:10:18] 2025-10-13 18:09:24,602 | INFO     | intersect: -1480895735.6344023
[2025-10-13 14:10:18] 2025-10-13 18:09:24,602 | INFO     | chi2: 0.9123425980820676
[2025-10-13 14:10:18] 2025-10-13 18:09:24,602 | INFO     | current chi2=0.9123425980820676 (change=7.104399475995528 %)
[2025-10-13 14:10:18] 2025-10-13 18:09:24,603 | INFO     | left removable region: 20
[2025-10-13 14:10:18] 2025-10-13 18:09:24,603 | INFO     | sum of square deviations: 11554035940.925098
[2025-10-13 14:10:18] 2025-10-13 18:09:24,606 | INFO     | sum of deviations: 18550639311.470078
[2025-10-13 14:10:18] 2025-10-13 18:09:24,606 | INFO     | mean x: 1760368408.01497
[2025-10-13 14:10:18] 2025-10-13 18:09:24,606 | INFO     | mean y: 2111836.505988024
[2025-10-13 14:10:18] 2025-10-13 18:09:24,606 | INFO     | -- intersect: -2824256331.237294
[2025-10-13 14:10:18] 2025-10-13 18:09:24,607 | INFO     | intersect: -2824256331.237294
[2025-10-13 14:10:18] 2025-10-13 18:09:24,607 | INFO     | chi2: 0.193582591527255
[2025-10-13 14:10:18] 2025-10-13 18:09:24,607 | INFO     | -- intersect: -2824256331.237294
[2025-10-13 14:10:18] 2025-10-13 18:09:24,607 | INFO     | current memory leak: 1.61 B/s (using 334 data points, chi2=0.19)
[2025-10-13 14:10:18] 2025-10-13 18:09:24,608 | INFO     | could have reported an average CPU frequency of 2617 MHz (16 samples)
[2025-10-13 14:10:18] 2025-10-13 18:09:24,608 | INFO     | ..............................
[2025-10-13 14:10:18] 2025-10-13 18:09:24,609 | INFO     | . Timing measurements:
[2025-10-13 14:10:18] 2025-10-13 18:09:24,609 | INFO     | . get job = 0 s
[2025-10-13 14:10:18] 2025-10-13 18:09:24,609 | INFO     | . initial setup = 6 s
[2025-10-13 14:10:18] 2025-10-13 18:09:24,609 | INFO     | . payload setup = 40 s
[2025-10-13 14:10:18] 2025-10-13 18:09:24,609 | INFO     | . stage-in = 0 s
[2025-10-13 14:10:18] 2025-10-13 18:09:24,609 | INFO     | . payload execution = 21951 s
[2025-10-13 14:10:18] 2025-10-13 18:09:24,609 | INFO     | . stage-out = 2 s
[2025-10-13 14:10:18] 2025-10-13 18:09:24,609 | INFO     | . log creation = 0 s
[2025-10-13 14:10:18] 2025-10-13 18:09:24,609 | INFO     | ..............................
[2025-10-13 14:10:18] 2025-10-13 18:09:24,688 | INFO     | 
[2025-10-13 14:10:18] 2025-10-13 18:09:24,688 | INFO     | job summary report
[2025-10-13 14:10:18] 2025-10-13 18:09:24,688 | INFO     | --------------------------------------------------
[2025-10-13 14:10:18] 2025-10-13 18:09:24,688 | INFO     | PanDA job id: 6837328782
[2025-10-13 14:10:18] 2025-10-13 18:09:24,688 | INFO     | task id: 46676269
[2025-10-13 14:10:18] 2025-10-13 18:09:24,689 | INFO     | errors: (none)
[2025-10-13 14:10:18] 2025-10-13 18:09:24,689 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 14:10:18] 2025-10-13 18:09:24,689 | INFO     | pilot state: finished 
[2025-10-13 14:10:18] 2025-10-13 18:09:24,689 | INFO     | transexitcode: 0
[2025-10-13 14:10:18] 2025-10-13 18:09:24,689 | INFO     | exeerrorcode: 0
[2025-10-13 14:10:18] 2025-10-13 18:09:24,689 | INFO     | exeerrordiag: 
[2025-10-13 14:10:18] 2025-10-13 18:09:24,689 | INFO     | exitcode: 0
[2025-10-13 14:10:18] 2025-10-13 18:09:24,689 | INFO     | exitmsg: OK
[2025-10-13 14:10:18] 2025-10-13 18:09:24,689 | INFO     | cpuconsumptiontime: 52903 s
[2025-10-13 14:10:18] 2025-10-13 18:09:24,689 | INFO     | nevents: 400
[2025-10-13 14:10:18] 2025-10-13 18:09:24,690 | INFO     | neventsw: 0
[2025-10-13 14:10:18] 2025-10-13 18:09:24,690 | INFO     | pid: 1989014
[2025-10-13 14:10:18] 2025-10-13 18:09:24,690 | INFO     | pgrp: 1989014
[2025-10-13 14:10:18] 2025-10-13 18:09:24,690 | INFO     | corecount: 8
[2025-10-13 14:10:18] 2025-10-13 18:09:24,690 | INFO     | event service: False
[2025-10-13 14:10:18] 2025-10-13 18:09:24,690 | INFO     | sizes: {0: 2348025, 1: 2348710, 2: 2348738, 3: 2348909, 4: 2348937, 14: 2348965, 25: 2349121, 27: 2349411, 36: 2349439, 21995: 2383303, 21997: 2392301, 22000: 2392
[2025-10-13 14:10:18] 2025-10-13 18:09:24,690 | INFO     | --------------------------------------------------
[2025-10-13 14:10:18] 2025-10-13 18:09:24,690 | INFO     | 
[2025-10-13 14:10:18] 2025-10-13 18:09:24,690 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 14:10:18] 2025-10-13 18:09:24,705 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 14:10:18] 2025-10-13 18:09:24,706 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 14:10:18] 2025-10-13 18:09:24,706 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 14:10:18] 2025-10-13 18:09:24,706 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 14:10:18] 2025-10-13 18:09:24,706 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 14:10:18] 2025-10-13 18:09:24,706 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 14:10:18] 2025-10-13 18:09:24,706 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 14:10:18] 2025-10-13 18:09:24,706 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 14:10:18] 2025-10-13 18:09:24,707 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 14:10:18] 2025-10-13 18:09:24,707 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 14:10:18] 2025-10-13 18:09:24,707 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 14:10:18] 2025-10-13 18:09:24,707 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 14:10:18] 2025-10-13 18:09:24,707 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 14:10:18] 2025-10-13 18:09:24,707 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 14:10:18] 2025-10-13 18:09:24,707 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 14:10:18] 2025-10-13 18:09:24,707 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 14:10:18] 2025-10-13 18:09:24,707 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 14:10:18] 2025-10-13 18:09:24,707 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 14:10:18] 2025-10-13 18:09:24,708 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 14:10:18] 2025-10-13 18:09:24,708 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 14:10:18] 2025-10-13 18:09:24,708 | INFO     | job 6837328782 has completed (purged errors)
[2025-10-13 14:10:18] 2025-10-13 18:09:24,708 | INFO     | overall cleanup function is called
[2025-10-13 14:10:18] 2025-10-13 18:09:25,716 | INFO     | --- collectZombieJob: --- 10, [1989014]
[2025-10-13 14:10:18] 2025-10-13 18:09:25,716 | INFO     | zombie collector waiting for pid 1989014
[2025-10-13 14:10:18] 2025-10-13 18:09:25,716 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 14:10:18] 2025-10-13 18:09:25,716 | INFO     | collected zombie processes
[2025-10-13 14:10:18] 2025-10-13 18:09:25,717 | INFO     | will attempt to kill all subprocesses of pid=1989014
[2025-10-13 14:10:18] 2025-10-13 18:09:26,026 | INFO     | process IDs to be killed: [1989014] (in reverse order)
[2025-10-13 14:10:18] 2025-10-13 18:09:26,129 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 14:10:18] 2025-10-13 18:09:26,129 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 14:10:18] 2025-10-13 18:09:26,140 | INFO     | did not find any defunct processes belonging to 1989014
[2025-10-13 14:10:18] 2025-10-13 18:09:26,151 | INFO     | did not find any defunct processes belonging to 1989014
[2025-10-13 14:10:18] 2025-10-13 18:09:26,151 | INFO     | ready for new job
[2025-10-13 14:10:18] 2025-10-13 18:09:26,151 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 14:10:18] 2025-10-13 18:09:26,154 | INFO     | ***************************************
[2025-10-13 14:10:18] 2025-10-13 18:09:26,154 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 14:10:18] 2025-10-13 18:09:26,154 | INFO     | ***************************************
[2025-10-13 14:10:18] 2025-10-13 18:09:26,154 | INFO     | 
[2025-10-13 14:10:18] 2025-10-13 18:09:26,168 | INFO     | architecture information:
[2025-10-13 14:10:18] 2025-10-13 18:09:26,169 | INFO     | executing command: cat /etc/os-release
[2025-10-13 14:10:18] 2025-10-13 18:09:26,182 | INFO     | cat /etc/os-release:
[2025-10-13 14:10:18] NAME="CentOS Linux"
[2025-10-13 14:10:18] VERSION="7 (Core)"
[2025-10-13 14:10:18] ID="centos"
[2025-10-13 14:10:18] ID_LIKE="rhel fedora"
[2025-10-13 14:10:18] VERSION_ID="7"
[2025-10-13 14:10:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 14:10:18] ANSI_COLOR="0;31"
[2025-10-13 14:10:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 14:10:18] HOME_URL="https://www.centos.org/"
[2025-10-13 14:10:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 14:10:18] 
[2025-10-13 14:10:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 14:10:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 14:10:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 14:10:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 14:10:18] 
[2025-10-13 14:10:18] 2025-10-13 18:09:26,183 | INFO     | ***************************************
[2025-10-13 14:10:18] 2025-10-13 18:09:26,685 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 14:10:18] 2025-10-13 18:09:26,707 | INFO     | sufficient remaining disk space (76522979328 B)
[2025-10-13 14:10:18] 2025-10-13 18:09:26,707 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 14:10:18] 2025-10-13 18:09:26,708 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 14:10:18] 2025-10-13 18:09:26,708 | INFO     | update_server=False
[2025-10-13 14:10:18] 2025-10-13 18:09:26,708 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 14:10:18] 2025-10-13 18:09:26,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 14:10:18] 2025-10-13 18:09:26,713 | INFO     | all data control threads have been joined
[2025-10-13 14:10:18] 2025-10-13 18:09:26,713 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 14:10:18] 2025-10-13 18:09:27,339 | INFO     | all job control threads have been joined
[2025-10-13 14:10:18] 2025-10-13 18:09:27,571 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:10:18] 2025-10-13 18:09:27,571 | INFO     | aborting loop
[2025-10-13 14:10:18] 2025-10-13 18:09:27,711 | INFO     | [job] retrieve thread has finished
[2025-10-13 14:10:18] 2025-10-13 18:09:27,719 | INFO     | [data] control thread has finished
[2025-10-13 14:10:18] 2025-10-13 18:09:27,841 | INFO     | all payload control threads have been joined
[2025-10-13 14:10:18] 2025-10-13 18:09:28,023 | INFO     | [data] copytool_in thread has finished
[2025-10-13 14:10:18] 2025-10-13 18:09:28,026 | INFO     | [job] validate thread has finished
[2025-10-13 14:10:18] 2025-10-13 18:09:28,046 | INFO     | [payload] validate_post thread has finished
[2025-10-13 14:10:18] 2025-10-13 18:09:28,344 | INFO     | [job] control thread has finished
[2025-10-13 14:10:18] 2025-10-13 18:09:28,392 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 14:10:18] 2025-10-13 18:09:28,460 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 14:10:18] 2025-10-13 18:09:28,488 | INFO     | [payload] failed_post thread has finished
[2025-10-13 14:10:18] 2025-10-13 18:09:28,490 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 14:10:18] 2025-10-13 18:09:28,577 | INFO     | [job] job monitor thread has finished
[2025-10-13 14:10:18] 2025-10-13 18:09:28,718 | INFO     | [data] copytool_out thread has finished
[2025-10-13 14:10:18] 2025-10-13 18:09:28,846 | INFO     | [payload] control thread has finished
[2025-10-13 14:10:18] 2025-10-13 18:09:28,906 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 14:10:18] 2025-10-13 18:09:29,700 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:10:18] 2025-10-13 18:09:30,705 | INFO     | [job] queue monitor thread has finished
[2025-10-13 14:10:18] 2025-10-13 18:09:30,719 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 14:10:18] 2025-10-13 18:09:57,376 | INFO     | PID=1980027 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 14:10:18] 2025-10-13 18:09:57,376 | INFO     | .. there are 16 such processes running
[2025-10-13 14:10:18] 2025-10-13 18:09:57,376 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 14:10:18] 2025-10-13 18:09:57,377 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 14:10:18] 2025-10-13 18:09:57,377 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 14:10:18] 2025-10-13 18:10:10,865 | INFO     | [monitor] cgroup control has ended
[2025-10-13 14:10:18] 2025-10-13 18:10:12,347 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139646536255296)>', '<ExcThread(monitor, started 139646180759296)>']
[2025-10-13 14:10:18] 2025-10-13 18:10:12,453 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 14:10:18] 2025-10-13 18:10:12,453 | INFO     | [monitor] control thread has ended
[2025-10-13 14:10:18] 2025-10-13 18:10:17,373 | INFO     | all workflow threads have been joined
[2025-10-13 14:10:18] 2025-10-13 18:10:17,373 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 14:10:18] 2025-10-13 18:10:17,373 | INFO     | traces error code: 0
[2025-10-13 14:10:18] 2025-10-13 18:10:17,374 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 14:10:18] 2025-10-13 18:10:17,593 [wrapper] ==== pilot stdout END ====
[2025-10-13 14:10:18] 2025-10-13 18:10:17,601 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 14:10:18] 2025-10-13 18:10:17,605 [wrapper] pilotpid: 1980027
[2025-10-13 14:10:18] 2025-10-13 18:10:17,609 [wrapper] Pilot exit status: 0
[2025-10-13 14:10:18] 2025-10-13 18:10:17,701 [wrapper] pandaids: 6837328782
[2025-10-13 14:10:18] 2025-10-13 18:10:17,912 [wrapper] cleanup supervisor_pilot 2800211 1980028
[2025-10-13 14:10:18] 2025-10-13 18:10:17,947 [wrapper] Test setup, not cleaning
[2025-10-13 14:10:18] 2025-10-13 18:10:17,990 [wrapper] apfmon messages muted
[2025-10-13 14:10:18] 2025-10-13 18:10:18,024 [wrapper] ==== wrapper stdout END ====
[2025-10-13 14:10:18] 2025-10-13 18:10:18,055 [wrapper] ==== wrapper stderr END ====
[2025-10-13 14:10:18]  *** Error codes and diagnostics ***
[2025-10-13 14:10:18]     "exeErrorCode": 0,
[2025-10-13 14:10:18]     "exeErrorDiag": "",
[2025-10-13 14:10:18]     "pilotErrorCode": 0,
[2025-10-13 14:10:18]     "pilotErrorDiag": "",
[2025-10-13 14:10:18]  *** Listing of results directory ***
[2025-10-13 14:10:18] total 420044
[2025-10-13 14:10:18] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 06:27 pilot3.tar.gz
[2025-10-13 14:10:18] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 06:48 queuedata.json
[2025-10-13 14:10:18] -rwx------. 1 boincer umatlas     36292 Oct  9 06:49 runpilot2-wrapper.sh
[2025-10-13 14:10:18] -rw-r--r--. 1 boincer umatlas       100 Oct 13 08:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 14:10:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 08:00 run_atlas
[2025-10-13 14:10:18] -rw-r--r--. 1 boincer umatlas       105 Oct 13 08:00 job.xml
[2025-10-13 14:10:18] -rw-r--r--. 2 boincer umatlas 223278176 Oct 13 08:00 EVNT.46676267._000576.pool.root.1
[2025-10-13 14:10:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 08:00 start_atlas.sh
[2025-10-13 14:10:18] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 08:00 shared
[2025-10-13 14:10:18] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 08:00 input.tar.gz
[2025-10-13 14:10:18] -rw-r--r--. 1 boincer umatlas         0 Oct 13 08:00 boinc_lockfile
[2025-10-13 14:10:18] -rw-r--r--. 1 boincer umatlas      2548 Oct 13 08:00 pandaJob.out
[2025-10-13 14:10:18] -rw-------. 1 boincer umatlas    972497 Oct 13 08:01 agis_schedconf.cvmfs.json
[2025-10-13 14:10:18] drwx------. 5 boincer umatlas      4096 Oct 13 08:01 pilot3
[2025-10-13 14:10:18] -rw-r--r--. 1 boincer umatlas      6659 Oct 13 14:02 init_data.xml
[2025-10-13 14:10:18] -rw-------. 1 boincer umatlas 196205820 Oct 13 14:08 HITS.46676269._014028.pool.root.1
[2025-10-13 14:10:18] -rw-r--r--. 1 boincer umatlas       531 Oct 13 14:08 boinc_task_state.xml
[2025-10-13 14:10:18] -rw-------. 1 boincer umatlas      1053 Oct 13 14:09 memory_monitor_summary.json
[2025-10-13 14:10:18] -rw-------. 1 boincer umatlas   1560580 Oct 13 14:09 agis_ddmendpoints.agis.ALL.json
[2025-10-13 14:10:18] -rw-------. 1 boincer umatlas    546658 Oct 13 14:09 log.46676269._014028.job.log.tgz.1
[2025-10-13 14:10:18] -rw-------. 1 boincer umatlas        95 Oct 13 14:09 pilot_heartbeat.json
[2025-10-13 14:10:18] -rw-------. 1 boincer umatlas      7822 Oct 13 14:09 heartbeat.json
[2025-10-13 14:10:18] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 14:10 boinc_mmap_file
[2025-10-13 14:10:18] -rw-r--r--. 1 boincer umatlas        28 Oct 13 14:10 wrapper_checkpoint.txt
[2025-10-13 14:10:18] -rw-------. 1 boincer umatlas      4824 Oct 13 14:10 pilotlog.txt
[2025-10-13 14:10:18] -rw-------. 1 boincer umatlas   2819510 Oct 13 14:10 log.46676269._014028.job.log.1
[2025-10-13 14:10:18] -rw-------. 1 boincer umatlas       357 Oct 13 14:10 output.list
[2025-10-13 14:10:18] -rw-r--r--. 1 boincer umatlas       620 Oct 13 14:10 runtime_log
[2025-10-13 14:10:18] -rw-------. 1 boincer umatlas   3389440 Oct 13 14:10 result.tar.gz
[2025-10-13 14:10:18] -rw-r--r--. 1 boincer umatlas      8694 Oct 13 14:10 runtime_log.err
[2025-10-13 14:10:18] -rw-------. 1 boincer umatlas       655 Oct 13 14:10 nk3MDmZO3Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvIZNDmfx3Bbn.diag
[2025-10-13 14:10:18] -rw-r--r--. 1 boincer umatlas     21252 Oct 13 14:10 stderr.txt
[2025-10-13 14:10:18] HITS file was successfully produced:
[2025-10-13 14:10:18] -rw-------. 1 boincer umatlas 196205820 Oct 13 14:08 shared/HITS.pool.root.1
[2025-10-13 14:10:18]  *** Contents of shared directory: ***
[2025-10-13 14:10:18] total 413552
[2025-10-13 14:10:18] -rw-r--r--. 2 boincer umatlas 223278176 Oct 13 08:00 ATLAS.root_0
[2025-10-13 14:10:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 08:00 start_atlas.sh
[2025-10-13 14:10:18] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 08:00 input.tar.gz
[2025-10-13 14:10:18] -rw-------. 1 boincer umatlas 196205820 Oct 13 14:08 HITS.pool.root.1
[2025-10-13 14:10:18] -rw-------. 1 boincer umatlas   3389440 Oct 13 14:10 result.tar.gz
14:10:20 (1975333): run_atlas exited; CPU time 53496.085337
14:10:20 (1975333): called boinc_finish(0)

</stderr_txt>
]]>

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