Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:58:09 (16694): wrapper (7.7.26015): starting
07:58:09 (16694): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 07:58:09] Arguments: --nthreads 12
[2025-10-13 07:58:09] Threads: 12
[2025-10-13 07:58:09] Checking for CVMFS
[2025-10-13 07:58:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:58:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:58:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:58:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:58:10] 2.11.2.0 2945 224292 98340 151660 3 56 16865497 20275201 1 130560 2 111162167 99.984 13466721 12807 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 07:58:10] CVMFS is ok
[2025-10-13 07:58:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:58:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 07:58:10] Further information can be found at the LHC@home message board.
[2025-10-13 07:58:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:58:10] Checking for apptainer binary...
[2025-10-13 07:58:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:58:10] Running /usr/bin/apptainer --version
[2025-10-13 07:58:10] apptainer version 1.3.2-1.el7
[2025-10-13 07:58:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:58:11] c-205-2.aglt2.org
[2025-10-13 07:58:11] apptainer works
[2025-10-13 07:58:11] Set ATHENA_PROC_NUMBER=12
[2025-10-13 07:58:11] Set ATHENA_CORE_NUMBER=12
[2025-10-13 07:58:11] Starting ATLAS job with PandaID=6842885185
[2025-10-13 07:58:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:16:40]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:16:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/4a/log.46676269._096759.job.log.tgz.1
[2025-10-13 09:16:40]  workdir=None
[2025-10-13 09:16:40] ]
[2025-10-13 09:16:40] 2025-10-13 13:15:51,070 | INFO     | transferring file log.46676269._096759.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6842885185/log.46676269._096759.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 09:16:40] 2025-10-13 13:15:51,070 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6842885185/log.46676269._096759.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._096759.job
[2025-10-13 09:16:40] 2025-10-13 13:15:51,091 | INFO     | adding to output.list: log.46676269._096759.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/4a/log.46676269._096759.job.log.tg
[2025-10-13 09:16:40] 2025-10-13 13:15:51,092 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 09:16:40] 2025-10-13 13:15:51,092 | INFO     | summary of transferred files:
[2025-10-13 09:16:40] 2025-10-13 13:15:51,093 | INFO     |  -- lfn=log.46676269._096759.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 09:16:40] 2025-10-13 13:15:51,093 | INFO     | stage-out finished correctly
[2025-10-13 09:16:40] 2025-10-13 13:15:51,251 | WARNING  | process 26822 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 09:16:40] 2025-10-13 13:15:51,252 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6842885185/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 09:16:40] 2025-10-13 13:15:51,341 | INFO     | number of running child processes to parent process 26822: 1
[2025-10-13 09:16:40] 2025-10-13 13:15:51,341 | INFO     | maximum number of monitored processes: 6
[2025-10-13 09:16:40] 2025-10-13 13:15:51,919 | INFO     | time since job start (4644s) is within the limit (172800.0s)
[2025-10-13 09:16:40] 2025-10-13 13:15:53,844 | INFO     | monitor loop #346: job 0:6842885185 is in state 'finished'
[2025-10-13 09:16:40] 2025-10-13 13:15:53,845 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 09:16:40] 2025-10-13 13:15:53,925 | INFO     | time since job start (4646s) is within the limit (172800.0s)
[2025-10-13 09:16:40] 2025-10-13 13:15:54,372 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 09:16:40] 2025-10-13 13:15:54,454 | INFO     | job 6842885185 has state=finished
[2025-10-13 09:16:40] 2025-10-13 13:15:54,454 | INFO     | preparing for final server update for job 6842885185 in state='finished'
[2025-10-13 09:16:40] 2025-10-13 13:15:54,454 | INFO     | this job has now completed (state=finished)
[2025-10-13 09:16:40] 2025-10-13 13:15:54,455 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 09:16:40] 2025-10-13 13:15:54,455 | INFO     | log transfer has been attempted: DONE
[2025-10-13 09:16:40] 2025-10-13 13:15:54,455 | INFO     | job 6842885185 has finished - writing final server update
[2025-10-13 09:16:40] 2025-10-13 13:15:54,455 | INFO     | total number of processed events: 400 (read)
[2025-10-13 09:16:40] 2025-10-13 13:15:54,456 | INFO     | executing command: lscpu
[2025-10-13 09:16:40] 2025-10-13 13:15:54,483 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 09:16:40] 2025-10-13 13:15:55,930 | INFO     | time since job start (4648s) is within the limit (172800.0s)
[2025-10-13 09:16:40] 2025-10-13 13:15:56,348 | INFO     | monitor loop #347: job 0:6842885185 is in state 'finished'
[2025-10-13 09:16:40] 2025-10-13 13:15:56,348 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 09:16:40] 2025-10-13 13:15:57,936 | INFO     | time since job start (4650s) is within the limit (172800.0s)
[2025-10-13 09:16:40] 2025-10-13 13:15:58,851 | INFO     | monitor loop #348: job 0:6842885185 is in state 'finished'
[2025-10-13 09:16:40] 2025-10-13 13:15:58,851 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 09:16:40] 2025-10-13 13:15:59,278 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 09:16:40] 2025-10-13 13:15:59,281 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1673.5833333333333
[2025-10-13 09:16:40] 2025-10-13 13:15:59,282 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6842885185/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 09:16:40] 2025-10-13 13:15:59,283 | INFO     | extracted standard info from prmon json
[2025-10-13 09:16:40] 2025-10-13 13:15:59,283 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 09:16:40] 2025-10-13 13:15:59,283 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 09:16:40] 2025-10-13 13:15:59,284 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 09:16:40] 2025-10-13 13:15:59,284 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 09:16:40] 2025-10-13 13:15:59,285 | INFO     | fitting pss+swap vs Time
[2025-10-13 09:16:40] 2025-10-13 13:15:59,285 | INFO     | sum of square deviations: 101843770.0
[2025-10-13 09:16:40] 2025-10-13 13:15:59,286 | INFO     | sum of deviations: -18703819.9999999
[2025-10-13 09:16:40] 2025-10-13 13:15:59,286 | INFO     | mean x: 1760359115.0
[2025-10-13 09:16:40] 2025-10-13 13:15:59,286 | INFO     | mean y: 2694142.507246377
[2025-10-13 09:16:40] 2025-10-13 13:15:59,286 | INFO     | -- intersect: 325987752.14403737
[2025-10-13 09:16:40] 2025-10-13 13:15:59,286 | INFO     | intersect: 325987752.14403737
[2025-10-13 09:16:40] 2025-10-13 13:15:59,286 | INFO     | chi2: 0.11620477995511545
[2025-10-13 09:16:40] 2025-10-13 13:15:59,286 | INFO     | -- intersect: 325987752.14403737
[2025-10-13 09:16:40] 2025-10-13 13:15:59,287 | INFO     | current memory leak: -0.18 B/s (using 69 data points, chi2=0.12)
[2025-10-13 09:16:40] 2025-10-13 13:15:59,287 | INFO     | could have reported an average CPU frequency of 2032 MHz (6 samples)
[2025-10-13 09:16:40] 2025-10-13 13:15:59,287 | INFO     | ..............................
[2025-10-13 09:16:40] 2025-10-13 13:15:59,287 | INFO     | . Timing measurements:
[2025-10-13 09:16:40] 2025-10-13 13:15:59,287 | INFO     | . get job = 0 s
[2025-10-13 09:16:40] 2025-10-13 13:15:59,287 | INFO     | . initial setup = 2 s
[2025-10-13 09:16:40] 2025-10-13 13:15:59,288 | INFO     | . payload setup = 7 s
[2025-10-13 09:16:40] 2025-10-13 13:15:59,288 | INFO     | . stage-in = 0 s
[2025-10-13 09:16:40] 2025-10-13 13:15:59,288 | INFO     | . payload execution = 4615 s
[2025-10-13 09:16:40] 2025-10-13 13:15:59,288 | INFO     | . stage-out = 0 s
[2025-10-13 09:16:40] 2025-10-13 13:15:59,288 | INFO     | . log creation = 0 s
[2025-10-13 09:16:40] 2025-10-13 13:15:59,288 | INFO     | ..............................
[2025-10-13 09:16:40] 2025-10-13 13:15:59,435 | INFO     | 
[2025-10-13 09:16:40] 2025-10-13 13:15:59,436 | INFO     | job summary report
[2025-10-13 09:16:40] 2025-10-13 13:15:59,436 | INFO     | --------------------------------------------------
[2025-10-13 09:16:40] 2025-10-13 13:15:59,436 | INFO     | PanDA job id: 6842885185
[2025-10-13 09:16:40] 2025-10-13 13:15:59,436 | INFO     | task id: 46676269
[2025-10-13 09:16:40] 2025-10-13 13:15:59,436 | INFO     | errors: (none)
[2025-10-13 09:16:40] 2025-10-13 13:15:59,436 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:16:40] 2025-10-13 13:15:59,437 | INFO     | pilot state: finished 
[2025-10-13 09:16:40] 2025-10-13 13:15:59,437 | INFO     | transexitcode: 0
[2025-10-13 09:16:40] 2025-10-13 13:15:59,437 | INFO     | exeerrorcode: 0
[2025-10-13 09:16:40] 2025-10-13 13:15:59,437 | INFO     | exeerrordiag: 
[2025-10-13 09:16:40] 2025-10-13 13:15:59,437 | INFO     | exitcode: 0
[2025-10-13 09:16:40] 2025-10-13 13:15:59,437 | INFO     | exitmsg: OK
[2025-10-13 09:16:40] 2025-10-13 13:15:59,437 | INFO     | cpuconsumptiontime: 47078 s
[2025-10-13 09:16:40] 2025-10-13 13:15:59,438 | INFO     | nevents: 400
[2025-10-13 09:16:40] 2025-10-13 13:15:59,438 | INFO     | neventsw: 0
[2025-10-13 09:16:40] 2025-10-13 13:15:59,438 | INFO     | pid: 26822
[2025-10-13 09:16:40] 2025-10-13 13:15:59,438 | INFO     | pgrp: 26822
[2025-10-13 09:16:40] 2025-10-13 13:15:59,438 | INFO     | corecount: 12
[2025-10-13 09:16:40] 2025-10-13 13:15:59,438 | INFO     | event service: False
[2025-10-13 09:16:40] 2025-10-13 13:15:59,439 | INFO     | sizes: {0: 2348806, 5: 2349068, 11: 2349124, 4626: 2375292, 4627: 2384290, 4631: 2384346, 4635: 2384668}
[2025-10-13 09:16:40] 2025-10-13 13:15:59,439 | INFO     | --------------------------------------------------
[2025-10-13 09:16:40] 2025-10-13 13:15:59,439 | INFO     | 
[2025-10-13 09:16:40] 2025-10-13 13:15:59,439 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 09:16:40] 2025-10-13 13:15:59,504 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:16:40] 2025-10-13 13:15:59,504 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:16:40] 2025-10-13 13:15:59,504 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:16:40] 2025-10-13 13:15:59,505 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:16:40] 2025-10-13 13:15:59,505 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:16:40] 2025-10-13 13:15:59,505 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:16:40] 2025-10-13 13:15:59,505 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:16:40] 2025-10-13 13:15:59,505 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:16:40] 2025-10-13 13:15:59,505 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:16:40] 2025-10-13 13:15:59,506 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:16:40] 2025-10-13 13:15:59,506 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:16:40] 2025-10-13 13:15:59,506 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:16:40] 2025-10-13 13:15:59,506 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:16:40] 2025-10-13 13:15:59,506 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:16:40] 2025-10-13 13:15:59,506 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:16:40] 2025-10-13 13:15:59,506 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:16:40] 2025-10-13 13:15:59,507 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:16:40] 2025-10-13 13:15:59,507 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:16:40] 2025-10-13 13:15:59,507 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:16:40] 2025-10-13 13:15:59,507 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:16:40] 2025-10-13 13:15:59,507 | INFO     | job 6842885185 has completed (purged errors)
[2025-10-13 09:16:40] 2025-10-13 13:15:59,507 | INFO     | overall cleanup function is called
[2025-10-13 09:16:40] 2025-10-13 13:16:00,515 | INFO     | --- collectZombieJob: --- 10, [26822]
[2025-10-13 09:16:40] 2025-10-13 13:16:00,515 | INFO     | zombie collector waiting for pid 26822
[2025-10-13 09:16:40] 2025-10-13 13:16:00,516 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:16:40] 2025-10-13 13:16:00,516 | INFO     | collected zombie processes
[2025-10-13 09:16:40] 2025-10-13 13:16:00,516 | INFO     | will attempt to kill all subprocesses of pid=26822
[2025-10-13 09:16:40] 2025-10-13 13:16:00,609 | INFO     | process IDs to be killed: [26822] (in reverse order)
[2025-10-13 09:16:40] 2025-10-13 13:16:00,665 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:16:40] 2025-10-13 13:16:00,666 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:16:40] 2025-10-13 13:16:00,669 | INFO     | did not find any defunct processes belonging to 26822
[2025-10-13 09:16:40] 2025-10-13 13:16:00,672 | INFO     | did not find any defunct processes belonging to 26822
[2025-10-13 09:16:40] 2025-10-13 13:16:00,672 | INFO     | ready for new job
[2025-10-13 09:16:40] 2025-10-13 13:16:00,672 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:16:40] 2025-10-13 13:16:00,673 | INFO     | ***************************************
[2025-10-13 09:16:40] 2025-10-13 13:16:00,673 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:16:40] 2025-10-13 13:16:00,673 | INFO     | ***************************************
[2025-10-13 09:16:40] 2025-10-13 13:16:00,673 | INFO     | 
[2025-10-13 09:16:40] 2025-10-13 13:16:00,674 | INFO     | architecture information:
[2025-10-13 09:16:40] 2025-10-13 13:16:00,674 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:16:40] 2025-10-13 13:16:00,690 | INFO     | cat /etc/os-release:
[2025-10-13 09:16:40] NAME="CentOS Linux"
[2025-10-13 09:16:40] VERSION="7 (Core)"
[2025-10-13 09:16:40] ID="centos"
[2025-10-13 09:16:40] ID_LIKE="rhel fedora"
[2025-10-13 09:16:40] VERSION_ID="7"
[2025-10-13 09:16:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:16:40] ANSI_COLOR="0;31"
[2025-10-13 09:16:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:16:40] HOME_URL="https://www.centos.org/"
[2025-10-13 09:16:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:16:40] 
[2025-10-13 09:16:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:16:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:16:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:16:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:16:40] 
[2025-10-13 09:16:40] 2025-10-13 13:16:00,690 | INFO     | ***************************************
[2025-10-13 09:16:40] 2025-10-13 13:16:01,193 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 09:16:40] 2025-10-13 13:16:01,210 | INFO     | sufficient remaining disk space (29434576896 B)
[2025-10-13 09:16:40] 2025-10-13 13:16:01,211 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:16:40] 2025-10-13 13:16:01,211 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:16:40] 2025-10-13 13:16:01,211 | INFO     | update_server=False
[2025-10-13 09:16:40] 2025-10-13 13:16:01,211 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:16:40] 2025-10-13 13:16:01,212 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:16:40] 2025-10-13 13:16:01,212 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:16:40] 2025-10-13 13:16:01,354 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 09:16:40] 2025-10-13 13:16:01,354 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 09:16:40] 2025-10-13 13:16:01,354 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:16:40] 2025-10-13 13:16:01,355 | INFO     | will abort loop
[2025-10-13 09:16:40] 2025-10-13 13:16:01,689 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:16:40] 2025-10-13 13:16:01,724 | INFO     | all payload control threads have been joined
[2025-10-13 09:16:40] 2025-10-13 13:16:01,793 | INFO     | all data control threads have been joined
[2025-10-13 09:16:40] 2025-10-13 13:16:01,919 | INFO     | all job control threads have been joined
[2025-10-13 09:16:40] 2025-10-13 13:16:02,217 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:16:40] 2025-10-13 13:16:02,217 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:16:40] 2025-10-13 13:16:02,360 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:16:40] 2025-10-13 13:16:02,414 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:16:40] 2025-10-13 13:16:02,492 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:16:40] 2025-10-13 13:16:02,698 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:16:40] 2025-10-13 13:16:02,730 | INFO     | [payload] control thread has finished
[2025-10-13 09:16:40] 2025-10-13 13:16:02,796 | INFO     | [data] control thread has finished
[2025-10-13 09:16:40] 2025-10-13 13:16:02,922 | INFO     | [job] control thread has finished
[2025-10-13 09:16:40] 2025-10-13 13:16:02,978 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:16:40] 2025-10-13 13:16:03,536 | INFO     | [job] validate thread has finished
[2025-10-13 09:16:40] 2025-10-13 13:16:03,581 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:16:40] 2025-10-13 13:16:03,694 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:16:40] 2025-10-13 13:16:03,758 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:16:40] 2025-10-13 13:16:05,218 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:16:40] 2025-10-13 13:16:11,662 | INFO     | job.realtimelogging is not enabled
[2025-10-13 09:16:40] 2025-10-13 13:16:12,667 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:16:40] 2025-10-13 13:16:31,142 | INFO     | PID=20446 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 09:16:40] 2025-10-13 13:16:31,143 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:16:40] 2025-10-13 13:16:31,143 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:16:40] 2025-10-13 13:16:31,143 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:16:40] 2025-10-13 13:16:34,349 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:16:40] 2025-10-13 13:16:35,354 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140430915336000)>', '<ExcThread(monitor, started 140430129755904)>']
[2025-10-13 09:16:40] 2025-10-13 13:16:36,168 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:16:40] 2025-10-13 13:16:36,168 | INFO     | [monitor] control thread has ended
[2025-10-13 09:16:40] 2025-10-13 13:16:40,380 | INFO     | all workflow threads have been joined
[2025-10-13 09:16:40] 2025-10-13 13:16:40,380 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:16:40] 2025-10-13 13:16:40,380 | INFO     | traces error code: 0
[2025-10-13 09:16:40] 2025-10-13 13:16:40,380 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:16:40] 2025-10-13 13:16:40,465 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:16:40] 2025-10-13 13:16:40,469 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:16:40] 2025-10-13 13:16:40,472 [wrapper] pilotpid: 20446
[2025-10-13 09:16:40] 2025-10-13 13:16:40,476 [wrapper] Pilot exit status: 0
[2025-10-13 09:16:40] 2025-10-13 13:16:40,492 [wrapper] pandaids: 6842885185
[2025-10-13 09:16:40] 2025-10-13 13:16:40,534 [wrapper] cleanup supervisor_pilot 18304 20447
[2025-10-13 09:16:40] 2025-10-13 13:16:40,538 [wrapper] Test setup, not cleaning
[2025-10-13 09:16:40] 2025-10-13 13:16:40,542 [wrapper] apfmon messages muted
[2025-10-13 09:16:40] 2025-10-13 13:16:40,546 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:16:40] 2025-10-13 13:16:40,550 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:16:40]  *** Error codes and diagnostics ***
[2025-10-13 09:16:40]     "exeErrorCode": 0,
[2025-10-13 09:16:40]     "exeErrorDiag": "",
[2025-10-13 09:16:40]     "pilotErrorCode": 0,
[2025-10-13 09:16:40]     "pilotErrorDiag": "",
[2025-10-13 09:16:40]  *** Listing of results directory ***
[2025-10-13 09:16:40] total 411684
[2025-10-13 09:16:40] -rw-r--r-- 1 boincer umatlas    557409 Oct 13 07:13 pilot3.tar.gz
[2025-10-13 09:16:40] -rwx------ 1 boincer umatlas     36292 Oct 13 07:57 runpilot2-wrapper.sh
[2025-10-13 09:16:40] -rw-r--r-- 1 boincer umatlas      5112 Oct 13 07:57 queuedata.json
[2025-10-13 09:16:40] -rw-r--r-- 1 boincer umatlas       100 Oct 13 07:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:16:40] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 07:58 run_atlas
[2025-10-13 09:16:40] -rw-r--r-- 1 boincer umatlas       105 Oct 13 07:58 job.xml
[2025-10-13 09:16:40] -rw-r--r-- 2 boincer umatlas 219615312 Oct 13 07:58 EVNT.46676267._002131.pool.root.1
[2025-10-13 09:16:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 07:58 start_atlas.sh
[2025-10-13 09:16:40] drwxrwx--x 2 boincer umatlas      4096 Oct 13 07:58 shared
[2025-10-13 09:16:40] -rw-r--r-- 2 boincer umatlas    569680 Oct 13 07:58 input.tar.gz
[2025-10-13 09:16:40] -rw-r--r-- 1 boincer umatlas         0 Oct 13 07:58 boinc_lockfile
[2025-10-13 09:16:40] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 07:58 pandaJob.out
[2025-10-13 09:16:40] -rw------- 1 boincer umatlas    972497 Oct 13 07:58 agis_schedconf.cvmfs.json
[2025-10-13 09:16:40] -rw------- 1 boincer umatlas   1560580 Oct 13 07:58 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:16:40] drwx------ 5 boincer umatlas      4096 Oct 13 07:58 pilot3
[2025-10-13 09:16:40] -rw-r--r-- 1 boincer umatlas      5951 Oct 13 09:11 init_data.xml
[2025-10-13 09:16:40] -rw------- 1 boincer umatlas 195926375 Oct 13 09:15 HITS.46676269._096759.pool.root.1
[2025-10-13 09:16:40] -rw-r--r-- 1 boincer umatlas       529 Oct 13 09:15 boinc_task_state.xml
[2025-10-13 09:16:40] -rw------- 1 boincer umatlas      1044 Oct 13 09:15 memory_monitor_summary.json
[2025-10-13 09:16:40] -rw------- 1 boincer umatlas    385531 Oct 13 09:15 log.46676269._096759.job.log.tgz.1
[2025-10-13 09:16:40] -rw------- 1 boincer umatlas      7848 Oct 13 09:15 heartbeat.json
[2025-10-13 09:16:40] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 09:16 boinc_mmap_file
[2025-10-13 09:16:40] -rw-r--r-- 1 boincer umatlas        27 Oct 13 09:16 wrapper_checkpoint.txt
[2025-10-13 09:16:40] -rw------- 1 boincer umatlas        95 Oct 13 09:16 pilot_heartbeat.json
[2025-10-13 09:16:40] -rw------- 1 boincer umatlas      5004 Oct 13 09:16 pilotlog.txt
[2025-10-13 09:16:40] -rw------- 1 boincer umatlas    673624 Oct 13 09:16 log.46676269._096759.job.log.1
[2025-10-13 09:16:40] -rw------- 1 boincer umatlas       357 Oct 13 09:16 output.list
[2025-10-13 09:16:40] -rw-r--r-- 1 boincer umatlas       620 Oct 13 09:16 runtime_log
[2025-10-13 09:16:40] -rw------- 1 boincer umatlas   1075200 Oct 13 09:16 result.tar.gz
[2025-10-13 09:16:40] -rw------- 1 boincer umatlas       658 Oct 13 09:16 zplNDmLMWS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm7jVMDmlBuSrn.diag
[2025-10-13 09:16:40] -rw-r--r-- 1 boincer umatlas      8700 Oct 13 09:16 runtime_log.err
[2025-10-13 09:16:40] -rw-r--r-- 1 boincer umatlas     22267 Oct 13 09:16 stderr.txt
[2025-10-13 09:16:40] HITS file was successfully produced:
[2025-10-13 09:16:40] -rw------- 1 boincer umatlas 195926375 Oct 13 09:15 shared/HITS.pool.root.1
[2025-10-13 09:16:40]  *** Contents of shared directory: ***
[2025-10-13 09:16:40] total 407444
[2025-10-13 09:16:40] -rw-r--r-- 2 boincer umatlas 219615312 Oct 13 07:58 ATLAS.root_0
[2025-10-13 09:16:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 07:58 start_atlas.sh
[2025-10-13 09:16:40] -rw-r--r-- 2 boincer umatlas    569680 Oct 13 07:58 input.tar.gz
[2025-10-13 09:16:40] -rw------- 1 boincer umatlas 195926375 Oct 13 09:15 HITS.pool.root.1
[2025-10-13 09:16:40] -rw------- 1 boincer umatlas   1075200 Oct 13 09:16 result.tar.gz
09:16:42 (16694): run_atlas exited; CPU time 47047.973247
09:16:42 (16694): called boinc_finish(0)

</stderr_txt>
]]>

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