Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:04:05 (2901332): wrapper (7.7.26015): starting
08:04:05 (2901332): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 08:04:05] Arguments: --nthreads 8
[2025-10-13 08:04:05] Threads: 8
[2025-10-13 08:04:05] Checking for CVMFS
[2025-10-13 08:04:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 08:04:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 08:04:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 08:04:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 08:04:06] 2.13.2.0 5281 7093 108772 151660 1 122 37894211 40960001 10722 16776704 0 10915191 99.914 2355022 34266 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 08:04:06] CVMFS is ok
[2025-10-13 08:04:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 08:04:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 08:04:06] Further information can be found at the LHC@home message board.
[2025-10-13 08:04:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 08:04:06] Checking for apptainer binary...
[2025-10-13 08:04:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 08:04:06] Running /usr/bin/apptainer --version
[2025-10-13 08:04:07] apptainer version 1.4.3-1.el9
[2025-10-13 08:04:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 08:04:07] c-210-33-4.aglt2.org
[2025-10-13 08:04:07] apptainer works
[2025-10-13 08:04:07] Set ATHENA_PROC_NUMBER=8
[2025-10-13 08:04:07] Set ATHENA_CORE_NUMBER=8
[2025-10-13 08:04:07] Starting ATLAS job with PandaID=6842879534
[2025-10-13 08:04:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:42:54]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:42:54] 2025-10-13 17:42:07,651 | INFO     | time since job start (20215s) is within the limit (172800.0s)
[2025-10-13 13:42:54] 2025-10-13 17:42:07,768 | INFO     | monitor loop #1293: job 0:6842879534 is in state 'finished'
[2025-10-13 13:42:54] 2025-10-13 17:42:07,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:42:54] 2025-10-13 17:42:08,529 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 13:42:54] 2025-10-13 17:42:08,554 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2495.9748571428568
[2025-10-13 13:42:54] 2025-10-13 17:42:08,657 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6842879534/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 13:42:54] 2025-10-13 17:42:08,658 | INFO     | extracted standard info from prmon json
[2025-10-13 13:42:54] 2025-10-13 17:42:08,659 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 13:42:54] 2025-10-13 17:42:08,659 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 13:42:54] 2025-10-13 17:42:08,659 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 13:42:54] 2025-10-13 17:42:08,659 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 13:42:54] 2025-10-13 17:42:08,718 | INFO     | fitting pss+swap vs Time
[2025-10-13 13:42:54] 2025-10-13 17:42:08,719 | INFO     | sum of square deviations: 11144027759.018244
[2025-10-13 13:42:54] 2025-10-13 17:42:08,745 | INFO     | sum of deviations: 256898085425.7635
[2025-10-13 13:42:54] 2025-10-13 17:42:08,745 | INFO     | mean x: 1760367216.9454546
[2025-10-13 13:42:54] 2025-10-13 17:42:08,745 | INFO     | mean y: 2434973.875757576
[2025-10-13 13:42:54] 2025-10-13 17:42:08,745 | INFO     | -- intersect: -40578491192.03389
[2025-10-13 13:42:54] 2025-10-13 17:42:08,746 | INFO     | intersect: -40578491192.03389
[2025-10-13 13:42:54] 2025-10-13 17:42:08,750 | INFO     | chi2: 3.3316963795964183
[2025-10-13 13:42:54] 2025-10-13 17:42:08,751 | INFO     | sum of square deviations: 10645168934.412252
[2025-10-13 13:42:54] 2025-10-13 17:42:08,792 | INFO     | sum of deviations: 252185701412.81525
[2025-10-13 13:42:54] 2025-10-13 17:42:08,792 | INFO     | mean x: 1760367064.4492307
[2025-10-13 13:42:54] 2025-10-13 17:42:08,792 | INFO     | mean y: 2433533.2615384613
[2025-10-13 13:42:54] 2025-10-13 17:42:08,792 | INFO     | -- intersect: -41700934973.8404
[2025-10-13 13:42:54] 2025-10-13 17:42:08,792 | INFO     | intersect: -41700934973.8404
[2025-10-13 13:42:54] 2025-10-13 17:42:08,793 | INFO     | chi2: 3.3217193941593033
[2025-10-13 13:42:54] 2025-10-13 17:42:08,793 | INFO     | current chi2=3.3217193941593033 (change=0.2994566221044295 %)
[2025-10-13 13:42:54] 2025-10-13 17:42:08,793 | INFO     | right removable region: 324
[2025-10-13 13:42:54] 2025-10-13 17:42:08,818 | INFO     | sum of square deviations: 10645099150.510757
[2025-10-13 13:42:54] 2025-10-13 17:42:08,821 | INFO     | sum of deviations: 180179173266.45538
[2025-10-13 13:42:54] 2025-10-13 17:42:08,822 | INFO     | mean x: 1760367369.4523077
[2025-10-13 13:42:54] 2025-10-13 17:42:08,857 | INFO     | mean y: 2458365.1261538463
[2025-10-13 13:42:54] 2025-10-13 17:42:08,857 | INFO     | -- intersect: -29793556945.63242
[2025-10-13 13:42:54] 2025-10-13 17:42:08,857 | INFO     | intersect: -29793556945.63242
[2025-10-13 13:42:54] 2025-10-13 17:42:08,858 | INFO     | chi2: 1.2323206574698031
[2025-10-13 13:42:54] 2025-10-13 17:42:08,858 | INFO     | current chi2=1.2323206574698031 (change=63.0122160885777 %)
[2025-10-13 13:42:54] 2025-10-13 17:42:08,858 | INFO     | sum of square deviations: 10161326388.296875
[2025-10-13 13:42:54] 2025-10-13 17:42:08,860 | INFO     | sum of deviations: 155954020147.3749
[2025-10-13 13:42:54] 2025-10-13 17:42:08,861 | INFO     | mean x: 1760367521.953125
[2025-10-13 13:42:54] 2025-10-13 17:42:08,861 | INFO     | mean y: 2465978.425
[2025-10-13 13:42:54] 2025-10-13 17:42:08,861 | INFO     | -- intersect: -27015305274.514427
[2025-10-13 13:42:54] 2025-10-13 17:42:08,861 | INFO     | intersect: -27015305274.514427
[2025-10-13 13:42:54] 2025-10-13 17:42:08,862 | INFO     | chi2: 1.0804143893442277
[2025-10-13 13:42:54] 2025-10-13 17:42:08,862 | INFO     | current chi2=1.0804143893442277 (change=12.326845874471411 %)
[2025-10-13 13:42:54] 2025-10-13 17:42:08,862 | INFO     | left removable region: 20
[2025-10-13 13:42:54] 2025-10-13 17:42:08,862 | INFO     | sum of square deviations: 8712092593.671064
[2025-10-13 13:42:54] 2025-10-13 17:42:08,865 | INFO     | sum of deviations: 90738979494.03946
[2025-10-13 13:42:54] 2025-10-13 17:42:08,865 | INFO     | mean x: 1760367643.9671052
[2025-10-13 13:42:54] 2025-10-13 17:42:08,865 | INFO     | mean y: 2485913.2039473685
[2025-10-13 13:42:54] 2025-10-13 17:42:08,865 | INFO     | -- intersect: -18332255347.91868
[2025-10-13 13:42:54] 2025-10-13 17:42:08,866 | INFO     | intersect: -18332255347.91868
[2025-10-13 13:42:54] 2025-10-13 17:42:08,866 | INFO     | chi2: 0.5155545040169814
[2025-10-13 13:42:54] 2025-10-13 17:42:08,867 | INFO     | -- intersect: -18332255347.91868
[2025-10-13 13:42:54] 2025-10-13 17:42:08,867 | INFO     | current memory leak: 10.42 B/s (using 304 data points, chi2=0.52)
[2025-10-13 13:42:54] 2025-10-13 17:42:08,868 | INFO     | could have reported an average CPU frequency of 2561 MHz (14 samples)
[2025-10-13 13:42:54] 2025-10-13 17:42:08,868 | INFO     | ..............................
[2025-10-13 13:42:54] 2025-10-13 17:42:08,868 | INFO     | . Timing measurements:
[2025-10-13 13:42:54] 2025-10-13 17:42:08,868 | INFO     | . get job = 0 s
[2025-10-13 13:42:54] 2025-10-13 17:42:08,868 | INFO     | . initial setup = 3 s
[2025-10-13 13:42:54] 2025-10-13 17:42:08,868 | INFO     | . payload setup = 9 s
[2025-10-13 13:42:54] 2025-10-13 17:42:08,869 | INFO     | . stage-in = 0 s
[2025-10-13 13:42:54] 2025-10-13 17:42:08,869 | INFO     | . payload execution = 20134 s
[2025-10-13 13:42:54] 2025-10-13 17:42:08,869 | INFO     | . stage-out = 2 s
[2025-10-13 13:42:54] 2025-10-13 17:42:08,869 | INFO     | . log creation = 0 s
[2025-10-13 13:42:54] 2025-10-13 17:42:08,869 | INFO     | ..............................
[2025-10-13 13:42:54] 2025-10-13 17:42:08,991 | INFO     | 
[2025-10-13 13:42:54] 2025-10-13 17:42:08,992 | INFO     | job summary report
[2025-10-13 13:42:54] 2025-10-13 17:42:08,992 | INFO     | --------------------------------------------------
[2025-10-13 13:42:54] 2025-10-13 17:42:08,992 | INFO     | PanDA job id: 6842879534
[2025-10-13 13:42:54] 2025-10-13 17:42:08,992 | INFO     | task id: 46676269
[2025-10-13 13:42:54] 2025-10-13 17:42:08,992 | INFO     | errors: (none)
[2025-10-13 13:42:54] 2025-10-13 17:42:08,992 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 13:42:54] 2025-10-13 17:42:08,992 | INFO     | pilot state: finished 
[2025-10-13 13:42:54] 2025-10-13 17:42:08,992 | INFO     | transexitcode: 0
[2025-10-13 13:42:54] 2025-10-13 17:42:08,993 | INFO     | exeerrorcode: 0
[2025-10-13 13:42:54] 2025-10-13 17:42:08,993 | INFO     | exeerrordiag: 
[2025-10-13 13:42:54] 2025-10-13 17:42:08,993 | INFO     | exitcode: 0
[2025-10-13 13:42:54] 2025-10-13 17:42:08,993 | INFO     | exitmsg: OK
[2025-10-13 13:42:54] 2025-10-13 17:42:08,993 | INFO     | cpuconsumptiontime: 48332 s
[2025-10-13 13:42:54] 2025-10-13 17:42:08,993 | INFO     | nevents: 400
[2025-10-13 13:42:54] 2025-10-13 17:42:08,993 | INFO     | neventsw: 0
[2025-10-13 13:42:54] 2025-10-13 17:42:08,993 | INFO     | pid: 2920313
[2025-10-13 13:42:54] 2025-10-13 17:42:08,993 | INFO     | pgrp: 2920313
[2025-10-13 13:42:54] 2025-10-13 17:42:08,993 | INFO     | corecount: 8
[2025-10-13 13:42:54] 2025-10-13 17:42:08,993 | INFO     | event service: False
[2025-10-13 13:42:54] 2025-10-13 17:42:08,994 | INFO     | sizes: {0: 2348635, 1: 2348834, 12: 2348834, 23: 2349152, 34: 2349152, 20147: 2382732, 20150: 2391730, 20154: 2391786, 20170: 2391980}
[2025-10-13 13:42:54] 2025-10-13 17:42:08,994 | INFO     | --------------------------------------------------
[2025-10-13 13:42:54] 2025-10-13 17:42:08,994 | INFO     | 
[2025-10-13 13:42:54] 2025-10-13 17:42:08,994 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 13:42:54] 2025-10-13 17:42:09,036 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 13:42:54] 2025-10-13 17:42:09,037 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 13:42:54] 2025-10-13 17:42:09,037 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 13:42:54] 2025-10-13 17:42:09,038 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 13:42:54] 2025-10-13 17:42:09,038 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 13:42:54] 2025-10-13 17:42:09,038 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 13:42:54] 2025-10-13 17:42:09,038 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 13:42:54] 2025-10-13 17:42:09,038 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 13:42:54] 2025-10-13 17:42:09,038 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 13:42:54] 2025-10-13 17:42:09,038 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 13:42:54] 2025-10-13 17:42:09,039 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 13:42:54] 2025-10-13 17:42:09,039 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 13:42:54] 2025-10-13 17:42:09,039 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 13:42:54] 2025-10-13 17:42:09,039 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 13:42:54] 2025-10-13 17:42:09,039 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 13:42:54] 2025-10-13 17:42:09,039 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 13:42:54] 2025-10-13 17:42:09,039 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 13:42:54] 2025-10-13 17:42:09,039 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 13:42:54] 2025-10-13 17:42:09,039 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 13:42:54] 2025-10-13 17:42:09,040 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 13:42:54] 2025-10-13 17:42:09,040 | INFO     | job 6842879534 has completed (purged errors)
[2025-10-13 13:42:54] 2025-10-13 17:42:09,040 | INFO     | overall cleanup function is called
[2025-10-13 13:42:54] 2025-10-13 17:42:10,051 | INFO     | --- collectZombieJob: --- 10, [2920313]
[2025-10-13 13:42:54] 2025-10-13 17:42:10,051 | INFO     | zombie collector waiting for pid 2920313
[2025-10-13 13:42:54] 2025-10-13 17:42:10,051 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 13:42:54] 2025-10-13 17:42:10,051 | INFO     | collected zombie processes
[2025-10-13 13:42:54] 2025-10-13 17:42:10,051 | INFO     | will attempt to kill all subprocesses of pid=2920313
[2025-10-13 13:42:54] 2025-10-13 17:42:10,436 | INFO     | process IDs to be killed: [2920313] (in reverse order)
[2025-10-13 13:42:54] 2025-10-13 17:42:10,523 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 13:42:54] 2025-10-13 17:42:10,523 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 13:42:54] 2025-10-13 17:42:10,540 | INFO     | did not find any defunct processes belonging to 2920313
[2025-10-13 13:42:54] 2025-10-13 17:42:10,554 | INFO     | did not find any defunct processes belonging to 2920313
[2025-10-13 13:42:54] 2025-10-13 17:42:10,554 | INFO     | ready for new job
[2025-10-13 13:42:54] 2025-10-13 17:42:10,555 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 13:42:54] 2025-10-13 17:42:10,558 | INFO     | ***************************************
[2025-10-13 13:42:54] 2025-10-13 17:42:10,558 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 13:42:54] 2025-10-13 17:42:10,558 | INFO     | ***************************************
[2025-10-13 13:42:54] 2025-10-13 17:42:10,558 | INFO     | 
[2025-10-13 13:42:54] 2025-10-13 17:42:10,561 | INFO     | architecture information:
[2025-10-13 13:42:54] 2025-10-13 17:42:10,562 | INFO     | executing command: cat /etc/os-release
[2025-10-13 13:42:54] 2025-10-13 17:42:10,589 | INFO     | cat /etc/os-release:
[2025-10-13 13:42:54] NAME="CentOS Linux"
[2025-10-13 13:42:54] VERSION="7 (Core)"
[2025-10-13 13:42:54] ID="centos"
[2025-10-13 13:42:54] ID_LIKE="rhel fedora"
[2025-10-13 13:42:54] VERSION_ID="7"
[2025-10-13 13:42:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 13:42:54] ANSI_COLOR="0;31"
[2025-10-13 13:42:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 13:42:54] HOME_URL="https://www.centos.org/"
[2025-10-13 13:42:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 13:42:54] 
[2025-10-13 13:42:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 13:42:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 13:42:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:42:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:42:54] 
[2025-10-13 13:42:54] 2025-10-13 17:42:10,590 | INFO     | ***************************************
[2025-10-13 13:42:54] 2025-10-13 17:42:11,093 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 13:42:54] 2025-10-13 17:42:11,145 | INFO     | sufficient remaining disk space (74927046656 B)
[2025-10-13 13:42:54] 2025-10-13 17:42:11,146 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:42:54] 2025-10-13 17:42:11,146 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:42:54] 2025-10-13 17:42:11,146 | INFO     | update_server=False
[2025-10-13 13:42:54] 2025-10-13 17:42:11,146 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:42:54] 2025-10-13 17:42:11,152 | INFO     | all job control threads have been joined
[2025-10-13 13:42:54] 2025-10-13 17:42:11,300 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:42:54] 2025-10-13 17:42:11,306 | INFO     | aborting loop
[2025-10-13 13:42:54] 2025-10-13 17:42:11,403 | INFO     | all data control threads have been joined
[2025-10-13 13:42:54] 2025-10-13 17:42:11,778 | INFO     | all payload control threads have been joined
[2025-10-13 13:42:54] 2025-10-13 17:42:12,115 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:42:54] 2025-10-13 17:42:12,152 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:42:54] 2025-10-13 17:42:12,163 | INFO     | [job] control thread has finished
[2025-10-13 13:42:54] 2025-10-13 17:42:12,222 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:42:54] 2025-10-13 17:42:12,312 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:42:54] 2025-10-13 17:42:12,312 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:42:54] 2025-10-13 17:42:12,409 | INFO     | [data] control thread has finished
[2025-10-13 13:42:54] 2025-10-13 17:42:12,647 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:42:54] 2025-10-13 17:42:12,784 | INFO     | [payload] control thread has finished
[2025-10-13 13:42:54] 2025-10-13 17:42:12,871 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:42:54] 2025-10-13 17:42:13,203 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:42:54] 2025-10-13 17:42:13,359 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:42:54] 2025-10-13 17:42:13,441 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:42:54] 2025-10-13 17:42:13,577 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:42:54] 2025-10-13 17:42:13,639 | INFO     | [job] validate thread has finished
[2025-10-13 13:42:54] 2025-10-13 17:42:14,008 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:42:54] 2025-10-13 17:42:14,122 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:42:54] 2025-10-13 17:42:15,014 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:42:54] 2025-10-13 17:42:16,231 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:42:54] 2025-10-13 17:42:41,049 | INFO     | PID=2910975 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 13:42:54] 2025-10-13 17:42:41,049 | INFO     | .. there are 9 such processes running
[2025-10-13 13:42:54] 2025-10-13 17:42:41,049 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:42:54] 2025-10-13 17:42:41,049 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:42:54] 2025-10-13 17:42:41,049 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:42:54] 2025-10-13 17:42:47,730 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:42:54] 2025-10-13 17:42:48,157 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140058667865920)>', '<ExcThread(monitor, started 140058296293120)>']
[2025-10-13 13:42:54] 2025-10-13 17:42:49,097 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:42:54] 2025-10-13 17:42:49,097 | INFO     | [monitor] control thread has ended
[2025-10-13 13:42:54] 2025-10-13 17:42:53,192 | INFO     | all workflow threads have been joined
[2025-10-13 13:42:54] 2025-10-13 17:42:53,192 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:42:54] 2025-10-13 17:42:53,192 | INFO     | traces error code: 0
[2025-10-13 13:42:54] 2025-10-13 17:42:53,193 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:42:54] 2025-10-13 17:42:53,824 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:42:54] 2025-10-13 17:42:53,830 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:42:54] 2025-10-13 17:42:53,833 [wrapper] pilotpid: 2910975
[2025-10-13 13:42:54] 2025-10-13 17:42:53,842 [wrapper] Pilot exit status: 0
[2025-10-13 13:42:54] 2025-10-13 17:42:53,871 [wrapper] pandaids: 6842879534
[2025-10-13 13:42:54] 2025-10-13 17:42:53,936 [wrapper] cleanup supervisor_pilot 3442100 2910976
[2025-10-13 13:42:54] 2025-10-13 17:42:53,940 [wrapper] Test setup, not cleaning
[2025-10-13 13:42:54] 2025-10-13 17:42:53,943 [wrapper] apfmon messages muted
[2025-10-13 13:42:54] 2025-10-13 17:42:53,951 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:42:54] 2025-10-13 17:42:53,966 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:42:54]  *** Error codes and diagnostics ***
[2025-10-13 13:42:54]     "exeErrorCode": 0,
[2025-10-13 13:42:54]     "exeErrorDiag": "",
[2025-10-13 13:42:54]     "pilotErrorCode": 0,
[2025-10-13 13:42:54]     "pilotErrorDiag": "",
[2025-10-13 13:42:54]  *** Listing of results directory ***
[2025-10-13 13:42:54] total 419452
[2025-10-13 13:42:54] -rw-r--r--. 1 boincer umatlas    557409 Oct 13 07:13 pilot3.tar.gz
[2025-10-13 13:42:54] -rw-r--r--. 1 boincer umatlas      5112 Oct 13 07:45 queuedata.json
[2025-10-13 13:42:54] -rwx------. 1 boincer umatlas     36292 Oct 13 07:46 runpilot2-wrapper.sh
[2025-10-13 13:42:54] -rw-r--r--. 1 boincer umatlas       100 Oct 13 08:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:42:54] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 08:04 run_atlas
[2025-10-13 13:42:54] -rw-r--r--. 1 boincer umatlas       105 Oct 13 08:04 job.xml
[2025-10-13 13:42:54] -rw-r--r--. 2 boincer umatlas 221971535 Oct 13 08:04 EVNT.46676267._004485.pool.root.1
[2025-10-13 13:42:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 08:04 start_atlas.sh
[2025-10-13 13:42:54] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 08:04 shared
[2025-10-13 13:42:54] -rw-r--r--. 2 boincer umatlas    569687 Oct 13 08:04 input.tar.gz
[2025-10-13 13:42:54] -rw-r--r--. 1 boincer umatlas         0 Oct 13 08:04 boinc_lockfile
[2025-10-13 13:42:54] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 08:04 pandaJob.out
[2025-10-13 13:42:54] -rw-------. 1 boincer umatlas    972497 Oct 13 08:05 agis_schedconf.cvmfs.json
[2025-10-13 13:42:54] drwx------. 5 boincer umatlas      4096 Oct 13 08:05 pilot3
[2025-10-13 13:42:54] -rw-r--r--. 1 boincer umatlas      6840 Oct 13 13:36 init_data.xml
[2025-10-13 13:42:54] -rw-------. 1 boincer umatlas 197303634 Oct 13 13:41 HITS.46676269._096751.pool.root.1
[2025-10-13 13:42:54] -rw-r--r--. 1 boincer umatlas       531 Oct 13 13:41 boinc_task_state.xml
[2025-10-13 13:42:54] -rw-------. 1 boincer umatlas      1043 Oct 13 13:41 memory_monitor_summary.json
[2025-10-13 13:42:54] -rw-------. 1 boincer umatlas   1560580 Oct 13 13:41 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:42:54] -rw-------. 1 boincer umatlas    545602 Oct 13 13:41 log.46676269._096751.job.log.tgz.1
[2025-10-13 13:42:54] -rw-------. 1 boincer umatlas        95 Oct 13 13:41 pilot_heartbeat.json
[2025-10-13 13:42:54] -rw-------. 1 boincer umatlas      7833 Oct 13 13:42 heartbeat.json
[2025-10-13 13:42:54] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 13:42 boinc_mmap_file
[2025-10-13 13:42:54] -rw-r--r--. 1 boincer umatlas        28 Oct 13 13:42 wrapper_checkpoint.txt
[2025-10-13 13:42:54] -rw-------. 1 boincer umatlas      4823 Oct 13 13:42 pilotlog.txt
[2025-10-13 13:42:54] -rw-------. 1 boincer umatlas   2625380 Oct 13 13:42 log.46676269._096751.job.log.1
[2025-10-13 13:42:54] -rw-------. 1 boincer umatlas       357 Oct 13 13:42 output.list
[2025-10-13 13:42:54] -rw-r--r--. 1 boincer umatlas       620 Oct 13 13:42 runtime_log
[2025-10-13 13:42:54] -rw-------. 1 boincer umatlas   3194880 Oct 13 13:42 result.tar.gz
[2025-10-13 13:42:54] -rw-r--r--. 1 boincer umatlas      8714 Oct 13 13:42 runtime_log.err
[2025-10-13 13:42:54] -rw-------. 1 boincer umatlas       659 Oct 13 13:42 C6RMDm5BWS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDmmNDmBEWyYn.diag
[2025-10-13 13:42:54] -rw-r--r--. 1 boincer umatlas     21217 Oct 13 13:42 stderr.txt
[2025-10-13 13:42:54] HITS file was successfully produced:
[2025-10-13 13:42:54] -rw-------. 1 boincer umatlas 197303634 Oct 13 13:41 shared/HITS.pool.root.1
[2025-10-13 13:42:54]  *** Contents of shared directory: ***
[2025-10-13 13:42:54] total 413152
[2025-10-13 13:42:54] -rw-r--r--. 2 boincer umatlas 221971535 Oct 13 08:04 ATLAS.root_0
[2025-10-13 13:42:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 08:04 start_atlas.sh
[2025-10-13 13:42:54] -rw-r--r--. 2 boincer umatlas    569687 Oct 13 08:04 input.tar.gz
[2025-10-13 13:42:54] -rw-------. 1 boincer umatlas 197303634 Oct 13 13:41 HITS.pool.root.1
[2025-10-13 13:42:54] -rw-------. 1 boincer umatlas   3194880 Oct 13 13:42 result.tar.gz
13:42:55 (2901332): run_atlas exited; CPU time 48930.637835
13:42:55 (2901332): called boinc_finish(0)

</stderr_txt>
]]>

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