Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:57:32 (24439): wrapper (7.7.26015): starting
22:57:32 (24439): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 22:57:32] Arguments: --nthreads 8
[2025-10-13 22:57:32] Threads: 8
[2025-10-13 22:57:32] Checking for CVMFS
[2025-10-13 22:57:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 22:57:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 22:57:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 22:57:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 22:57:35] 2.11.2.0 25379 222469 135772 151672 1 161 17164868 25165824 4632 130560 0 124302296 99.894 67988762 3545 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 22:57:35] CVMFS is ok
[2025-10-13 22:57:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 22:57:35] Checking for apptainer binary...
[2025-10-13 22:57:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 22:57:35] Running /usr/bin/apptainer --version
[2025-10-13 22:57:35] apptainer version 1.3.2-1.el7
[2025-10-13 22:57:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 22:57:59] cg-vwn336.simple-grid.lan
[2025-10-13 22:57:59] apptainer works
[2025-10-13 22:57:59] Set ATHENA_PROC_NUMBER=8
[2025-10-13 22:57:59] Set ATHENA_CORE_NUMBER=8
[2025-10-13 22:58:00] Starting ATLAS job with PandaID=6840852396
[2025-10-13 22:58:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 03:06:01]  *** The last 200 lines of the pilot log: ***
[2025-10-14 03:06:01] 2025-10-14 01:04:56,734 | INFO     | sum of square deviations: 3772712597.5
[2025-10-14 03:06:01] 2025-10-14 01:04:56,736 | INFO     | sum of deviations: 71557874631.99998
[2025-10-14 03:06:01] 2025-10-14 01:04:56,736 | INFO     | mean x: 1760396764.5
[2025-10-14 03:06:01] 2025-10-14 01:04:56,737 | INFO     | mean y: 2445718.304347826
[2025-10-14 03:06:01] 2025-10-14 01:04:56,737 | INFO     | -- intersect: -33387389240.272667
[2025-10-14 03:06:01] 2025-10-14 01:04:56,737 | INFO     | intersect: -33387389240.272667
[2025-10-14 03:06:01] 2025-10-14 01:04:56,737 | INFO     | chi2: 6.394504761736144
[2025-10-14 03:06:01] 2025-10-14 01:04:56,738 | INFO     | sum of square deviations: 3531973200.0
[2025-10-14 03:06:01] 2025-10-14 01:04:56,744 | INFO     | sum of deviations: 85023302674.0
[2025-10-14 03:06:01] 2025-10-14 01:04:56,745 | INFO     | mean x: 1760396612.0
[2025-10-14 03:06:01] 2025-10-14 01:04:56,745 | INFO     | mean y: 2454078.351111111
[2025-10-14 03:06:01] 2025-10-14 01:04:56,745 | INFO     | -- intersect: -42374632465.89564
[2025-10-14 03:06:01] 2025-10-14 01:04:56,745 | INFO     | intersect: -42374632465.89564
[2025-10-14 03:06:01] 2025-10-14 01:04:56,745 | INFO     | chi2: 5.681893055658382
[2025-10-14 03:06:01] 2025-10-14 01:04:56,745 | INFO     | current chi2=5.681893055658382 (change=11.144126599794468 %)
[2025-10-14 03:06:01] 2025-10-14 01:04:56,745 | INFO     | right removable region: 224
[2025-10-14 03:06:01] 2025-10-14 01:04:56,746 | INFO     | sum of square deviations: 3531973200.0
[2025-10-14 03:06:01] 2025-10-14 01:04:56,747 | INFO     | sum of deviations: -6608418530.000007
[2025-10-14 03:06:01] 2025-10-14 01:04:56,748 | INFO     | mean x: 1760396917.0
[2025-10-14 03:06:01] 2025-10-14 01:04:56,748 | INFO     | mean y: 2495189.4711111113
[2025-10-14 03:06:01] 2025-10-14 01:04:56,748 | INFO     | -- intersect: 3296246004.584228
[2025-10-14 03:06:01] 2025-10-14 01:04:56,748 | INFO     | intersect: 3296246004.584228
[2025-10-14 03:06:01] 2025-10-14 01:04:56,748 | INFO     | chi2: 1.8092016722135704
[2025-10-14 03:06:01] 2025-10-14 01:04:56,748 | INFO     | current chi2=1.8092016722135704 (change=71.70693056576344 %)
[2025-10-14 03:06:01] 2025-10-14 01:04:56,749 | INFO     | sum of square deviations: 3301699115.0
[2025-10-14 03:06:01] 2025-10-14 01:04:56,750 | INFO     | sum of deviations: -38471237342.0
[2025-10-14 03:06:01] 2025-10-14 01:04:56,751 | INFO     | mean x: 1760397069.5
[2025-10-14 03:06:01] 2025-10-14 01:04:56,751 | INFO     | mean y: 2516148.7454545456
[2025-10-14 03:06:01] 2025-10-14 01:04:56,751 | INFO     | -- intersect: 20514577096.157307
[2025-10-14 03:06:01] 2025-10-14 01:04:56,751 | INFO     | intersect: 20514577096.157307
[2025-10-14 03:06:01] 2025-10-14 01:04:56,751 | INFO     | chi2: 0.843333943604608
[2025-10-14 03:06:01] 2025-10-14 01:04:56,752 | INFO     | current chi2=0.843333943604608 (change=53.386404812859624 %)
[2025-10-14 03:06:01] 2025-10-14 01:04:56,752 | INFO     | sum of square deviations: 3081657780.0
[2025-10-14 03:06:01] 2025-10-14 01:04:56,754 | INFO     | sum of deviations: -36907315926.0
[2025-10-14 03:06:01] 2025-10-14 01:04:56,754 | INFO     | mean x: 1760397222.0
[2025-10-14 03:06:01] 2025-10-14 01:04:56,754 | INFO     | mean y: 2515059.1674418603
[2025-10-14 03:06:01] 2025-10-14 01:04:56,754 | INFO     | -- intersect: 21085821858.927265
[2025-10-14 03:06:01] 2025-10-14 01:04:56,754 | INFO     | intersect: 21085821858.927265
[2025-10-14 03:06:01] 2025-10-14 01:04:56,754 | INFO     | chi2: 0.8431983601903044
[2025-10-14 03:06:01] 2025-10-14 01:04:56,755 | INFO     | current chi2=0.8431983601903044 (change=0.016077073065994017 %)
[2025-10-14 03:06:01] 2025-10-14 01:04:56,755 | INFO     | left removable region: 30
[2025-10-14 03:06:01] 2025-10-14 01:04:56,755 | INFO     | sum of square deviations: 2263977332.5
[2025-10-14 03:06:01] 2025-10-14 01:04:56,757 | INFO     | sum of deviations: -13716668650.499996
[2025-10-14 03:06:01] 2025-10-14 01:04:56,757 | INFO     | mean x: 1760397496.5
[2025-10-14 03:06:01] 2025-10-14 01:04:56,757 | INFO     | mean y: 2519046.211340206
[2025-10-14 03:06:01] 2025-10-14 01:04:56,757 | INFO     | -- intersect: 10668168744.212557
[2025-10-14 03:06:01] 2025-10-14 01:04:56,757 | INFO     | intersect: 10668168744.212557
[2025-10-14 03:06:01] 2025-10-14 01:04:56,757 | INFO     | chi2: 0.051399164213822804
[2025-10-14 03:06:01] 2025-10-14 01:04:56,757 | INFO     | -- intersect: 10668168744.212557
[2025-10-14 03:06:01] 2025-10-14 01:04:56,758 | INFO     | current memory leak: -6.06 B/s (using 194 data points, chi2=0.05)
[2025-10-14 03:06:01] 2025-10-14 01:04:56,758 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-14 03:06:01] 2025-10-14 01:04:56,758 | INFO     | ..............................
[2025-10-14 03:06:01] 2025-10-14 01:04:56,764 | INFO     | . Timing measurements:
[2025-10-14 03:06:01] 2025-10-14 01:04:56,764 | INFO     | . get job = 0 s
[2025-10-14 03:06:01] 2025-10-14 01:04:56,764 | INFO     | . initial setup = 5 s
[2025-10-14 03:06:01] 2025-10-14 01:04:56,764 | INFO     | . payload setup = 127 s
[2025-10-14 03:06:01] 2025-10-14 01:04:56,764 | INFO     | . stage-in = 0 s
[2025-10-14 03:06:01] 2025-10-14 01:04:56,764 | INFO     | . payload execution = 14169 s
[2025-10-14 03:06:01] 2025-10-14 01:04:56,764 | INFO     | . stage-out = 3 s
[2025-10-14 03:06:01] 2025-10-14 01:04:56,764 | INFO     | . log creation = 1 s
[2025-10-14 03:06:01] 2025-10-14 01:04:56,764 | INFO     | ..............................
[2025-10-14 03:06:01] 2025-10-14 01:04:56,971 | INFO     | 
[2025-10-14 03:06:01] 2025-10-14 01:04:56,971 | INFO     | job summary report
[2025-10-14 03:06:01] 2025-10-14 01:04:56,971 | INFO     | --------------------------------------------------
[2025-10-14 03:06:01] 2025-10-14 01:04:56,971 | INFO     | PanDA job id: 6840852396
[2025-10-14 03:06:01] 2025-10-14 01:04:56,971 | INFO     | task id: 46676269
[2025-10-14 03:06:01] 2025-10-14 01:04:56,971 | INFO     | errors: (none)
[2025-10-14 03:06:01] 2025-10-14 01:04:56,971 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 03:06:01] 2025-10-14 01:04:56,972 | INFO     | pilot state: finished 
[2025-10-14 03:06:01] 2025-10-14 01:04:56,972 | INFO     | transexitcode: 0
[2025-10-14 03:06:01] 2025-10-14 01:04:56,972 | INFO     | exeerrorcode: 0
[2025-10-14 03:06:01] 2025-10-14 01:04:56,972 | INFO     | exeerrordiag: 
[2025-10-14 03:06:01] 2025-10-14 01:04:56,972 | INFO     | exitcode: 0
[2025-10-14 03:06:01] 2025-10-14 01:04:56,972 | INFO     | exitmsg: OK
[2025-10-14 03:06:01] 2025-10-14 01:04:56,972 | INFO     | cpuconsumptiontime: 53203 s
[2025-10-14 03:06:01] 2025-10-14 01:04:56,972 | INFO     | nevents: 400
[2025-10-14 03:06:01] 2025-10-14 01:04:56,972 | INFO     | neventsw: 0
[2025-10-14 03:06:01] 2025-10-14 01:04:56,972 | INFO     | pid: 2710
[2025-10-14 03:06:01] 2025-10-14 01:04:56,972 | INFO     | pgrp: 2710
[2025-10-14 03:06:01] 2025-10-14 01:04:56,973 | INFO     | corecount: 8
[2025-10-14 03:06:01] 2025-10-14 01:04:56,973 | INFO     | event service: False
[2025-10-14 03:06:01] 2025-10-14 01:04:56,973 | INFO     | sizes: {0: 2348630, 1: 2348885, 12: 2348885, 23: 2348913, 33: 2348941, 44: 2348997, 55: 2349153, 66: 2349181, 76: 2349209, 87: 2349265, 98: 2349835, 108: 2349863, 
[2025-10-14 03:06:01] 2025-10-14 01:04:56,973 | INFO     | --------------------------------------------------
[2025-10-14 03:06:01] 2025-10-14 01:04:56,973 | INFO     | 
[2025-10-14 03:06:01] 2025-10-14 01:04:56,973 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-10-14 03:06:01] 2025-10-14 01:04:57,085 | INFO     | PID=28588 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-14 03:06:01] 2025-10-14 01:04:57,086 | INFO     | .. there are 9 such processes running
[2025-10-14 03:06:01] 2025-10-14 01:04:57,542 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 03:06:01] 2025-10-14 01:04:57,542 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 03:06:01] 2025-10-14 01:04:57,542 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 03:06:01] 2025-10-14 01:04:57,542 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 03:06:01] 2025-10-14 01:04:57,542 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 03:06:01] 2025-10-14 01:04:57,543 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 03:06:01] 2025-10-14 01:04:57,543 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 03:06:01] 2025-10-14 01:04:57,543 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 03:06:01] 2025-10-14 01:04:57,543 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 03:06:01] 2025-10-14 01:04:57,543 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 03:06:01] 2025-10-14 01:04:57,543 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 03:06:01] 2025-10-14 01:04:57,543 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 03:06:01] 2025-10-14 01:04:57,543 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 03:06:01] 2025-10-14 01:04:57,543 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 03:06:01] 2025-10-14 01:04:57,543 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 03:06:01] 2025-10-14 01:04:57,543 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 03:06:01] 2025-10-14 01:04:57,543 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 03:06:01] 2025-10-14 01:04:57,543 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 03:06:01] 2025-10-14 01:04:57,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 03:06:01] 2025-10-14 01:04:57,544 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 03:06:01] 2025-10-14 01:04:57,544 | INFO     | job 6840852396 has completed (purged errors)
[2025-10-14 03:06:01] 2025-10-14 01:04:57,544 | INFO     | overall cleanup function is called
[2025-10-14 03:06:01] 2025-10-14 01:04:58,553 | INFO     | --- collectZombieJob: --- 10, [2710]
[2025-10-14 03:06:01] 2025-10-14 01:04:58,553 | INFO     | zombie collector waiting for pid 2710
[2025-10-14 03:06:01] 2025-10-14 01:04:58,553 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 03:06:01] 2025-10-14 01:04:58,553 | INFO     | collected zombie processes
[2025-10-14 03:06:01] 2025-10-14 01:04:58,553 | INFO     | will attempt to kill all subprocesses of pid=2710
[2025-10-14 03:06:01] 2025-10-14 01:04:58,635 | INFO     | process IDs to be killed: [2710] (in reverse order)
[2025-10-14 03:06:01] 2025-10-14 01:04:59,075 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 03:06:01] 2025-10-14 01:04:59,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 03:06:01] 2025-10-14 01:04:59,084 | INFO     | did not find any defunct processes belonging to 2710
[2025-10-14 03:06:01] 2025-10-14 01:04:59,086 | INFO     | did not find any defunct processes belonging to 2710
[2025-10-14 03:06:01] 2025-10-14 01:04:59,087 | INFO     | ready for new job
[2025-10-14 03:06:01] 2025-10-14 01:04:59,087 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 03:06:01] 2025-10-14 01:04:59,089 | INFO     | ***************************************
[2025-10-14 03:06:01] 2025-10-14 01:04:59,089 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 03:06:01] 2025-10-14 01:04:59,089 | INFO     | ***************************************
[2025-10-14 03:06:01] 2025-10-14 01:04:59,089 | INFO     | 
[2025-10-14 03:06:01] 2025-10-14 01:04:59,090 | INFO     | pilot is running in a VM
[2025-10-14 03:06:01] 2025-10-14 01:04:59,090 | INFO     | architecture information:
[2025-10-14 03:06:01] 2025-10-14 01:04:59,100 | INFO     | executing command: cat /etc/os-release
[2025-10-14 03:06:01] 2025-10-14 01:04:59,230 | INFO     | cat /etc/os-release:
[2025-10-14 03:06:01] NAME="CentOS Linux"
[2025-10-14 03:06:01] VERSION="7 (Core)"
[2025-10-14 03:06:01] ID="centos"
[2025-10-14 03:06:01] ID_LIKE="rhel fedora"
[2025-10-14 03:06:01] VERSION_ID="7"
[2025-10-14 03:06:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 03:06:01] ANSI_COLOR="0;31"
[2025-10-14 03:06:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 03:06:01] HOME_URL="https://www.centos.org/"
[2025-10-14 03:06:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 03:06:01] 
[2025-10-14 03:06:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 03:06:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 03:06:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 03:06:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 03:06:01] 
[2025-10-14 03:06:01] 2025-10-14 01:04:59,230 | INFO     | ***************************************
[2025-10-14 03:06:01] 2025-10-14 01:04:59,734 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-10-14 03:06:01] 2025-10-14 01:04:59,864 | INFO     | sufficient remaining disk space (496121151488 B)
[2025-10-14 03:06:01] 2025-10-14 01:04:59,864 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 03:06:01] 2025-10-14 01:04:59,864 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 03:06:01] 2025-10-14 01:04:59,864 | INFO     | update_server=False
[2025-10-14 03:06:01] 2025-10-14 01:04:59,864 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 03:06:01] 2025-10-14 01:04:59,865 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 03:06:01] 2025-10-14 01:04:59,865 | INFO     | aborting loop
[2025-10-14 03:06:01] 2025-10-14 01:04:59,868 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 03:06:01] 2025-10-14 01:05:00,558 | INFO     | all job control threads have been joined
[2025-10-14 03:06:01] 2025-10-14 01:05:00,870 | INFO     | [job] retrieve thread has finished
[2025-10-14 03:06:01] 2025-10-14 01:05:00,871 | INFO     | [job] job monitor thread has finished
[2025-10-14 03:06:01] 2025-10-14 01:05:00,924 | INFO     | all data control threads have been joined
[2025-10-14 03:06:01] 2025-10-14 01:05:00,933 | INFO     | all payload control threads have been joined
[2025-10-14 03:06:01] 2025-10-14 01:05:01,116 | INFO     | [payload] validate_post thread has finished
[2025-10-14 03:06:01] 2025-10-14 01:05:01,150 | INFO     | [payload] failed_post thread has finished
[2025-10-14 03:06:01] 2025-10-14 01:05:01,166 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 03:06:01] 2025-10-14 01:05:01,329 | INFO     | [data] copytool_in thread has finished
[2025-10-14 03:06:01] 2025-10-14 01:05:01,491 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 03:06:01] 2025-10-14 01:05:01,511 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 03:06:01] 2025-10-14 01:05:01,563 | INFO     | [job] control thread has finished
[2025-10-14 03:06:01] 2025-10-14 01:05:01,875 | INFO     | [data] copytool_out thread has finished
[2025-10-14 03:06:01] 2025-10-14 01:05:01,930 | INFO     | [data] control thread has finished
[2025-10-14 03:06:01] 2025-10-14 01:05:01,939 | INFO     | [payload] control thread has finished
[2025-10-14 03:06:01] 2025-10-14 01:05:01,992 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 03:06:01] 2025-10-14 01:05:01,995 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 03:06:01] 2025-10-14 01:05:02,125 | INFO     | [job] validate thread has finished
[2025-10-14 03:06:01] 2025-10-14 01:05:03,001 | INFO     | [job] queue monitor thread has finished
[2025-10-14 03:06:01] 2025-10-14 01:05:06,003 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 03:06:01] 2025-10-14 01:05:10,285 | INFO     | job.realtimelogging is not enabled
[2025-10-14 03:06:01] 2025-10-14 01:05:11,291 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 03:06:01] 2025-10-14 01:05:29,288 | INFO     | PID=28588 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-14 03:06:01] 2025-10-14 01:05:29,288 | INFO     | .. there are 9 such processes running
[2025-10-14 03:06:01] 2025-10-14 01:05:29,289 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 03:06:01] 2025-10-14 01:05:29,289 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 03:06:01] 2025-10-14 01:05:29,290 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 03:06:01] 2025-10-14 01:05:50,854 | INFO     | [monitor] cgroup control has ended
[2025-10-14 03:06:01] 2025-10-14 01:05:51,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139671002715968)>', '<ExcThread(monitor, started 139670256088832)>']
[2025-10-14 03:06:01] 2025-10-14 01:05:51,421 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 03:06:01] 2025-10-14 01:05:51,421 | INFO     | [monitor] control thread has ended
[2025-10-14 03:06:01] 2025-10-14 01:05:56,437 | INFO     | all workflow threads have been joined
[2025-10-14 03:06:01] 2025-10-14 01:05:56,437 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 03:06:01] 2025-10-14 01:05:56,437 | INFO     | traces error code: 0
[2025-10-14 03:06:01] 2025-10-14 01:05:56,437 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 03:06:01] 2025-10-14 01:05:56,760 [wrapper] ==== pilot stdout END ====
[2025-10-14 03:06:01] 2025-10-14 01:05:56,840 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 03:06:01] 2025-10-14 01:05:56,939 [wrapper] pilotpid: 28588
[2025-10-14 03:06:01] 2025-10-14 01:05:57,031 [wrapper] Pilot exit status: 0
[2025-10-14 03:06:01] 2025-10-14 01:05:57,457 [wrapper] pandaids: 6840852396
[2025-10-14 03:06:01] 2025-10-14 01:05:58,422 [wrapper] cleanup supervisor_pilot 29528 28589
[2025-10-14 03:06:01] 2025-10-14 01:05:58,501 [wrapper] Test setup, not cleaning
[2025-10-14 03:06:01] 2025-10-14 01:05:58,562 [wrapper] apfmon messages muted
[2025-10-14 03:06:01] 2025-10-14 01:05:58,604 [wrapper] ==== wrapper stdout END ====
[2025-10-14 03:06:01] 2025-10-14 01:05:58,649 [wrapper] ==== wrapper stderr END ====
[2025-10-14 03:06:01]  *** Error codes and diagnostics ***
[2025-10-14 03:06:01]     "exeErrorCode": 0,
[2025-10-14 03:06:01]     "exeErrorDiag": "",
[2025-10-14 03:06:01]     "pilotErrorCode": 0,
[2025-10-14 03:06:01]     "pilotErrorDiag": "",
[2025-10-14 03:06:01]  *** Listing of results directory ***
[2025-10-14 03:06:01] total 413000
[2025-10-14 03:06:01] -rw-r--r--. 1 boinc boinc    557409 Oct 12 23:57 pilot3.tar.gz
[2025-10-14 03:06:01] -rwx------. 1 boinc boinc     36292 Oct 13 00:37 runpilot2-wrapper.sh
[2025-10-14 03:06:01] -rw-r--r--. 1 boinc boinc      5112 Oct 13 00:37 queuedata.json
[2025-10-14 03:06:01] -rw-r--r--. 1 boinc boinc       100 Oct 13 22:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 03:06:01] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 22:57 run_atlas
[2025-10-14 03:06:01] -rw-r--r--. 1 boinc boinc       105 Oct 13 22:57 job.xml
[2025-10-14 03:06:01] -rw-r--r--. 1 boinc boinc      6389 Oct 13 22:57 init_data.xml
[2025-10-14 03:06:01] -rw-r--r--. 2 boinc boinc 220486928 Oct 13 22:57 EVNT.46676267._004620.pool.root.1
[2025-10-14 03:06:01] -rw-r--r--. 2 boinc boinc     15120 Oct 13 22:57 start_atlas.sh
[2025-10-14 03:06:01] drwxrwx--x. 2 boinc boinc        68 Oct 13 22:57 shared
[2025-10-14 03:06:01] -rw-r--r--. 2 boinc boinc    569677 Oct 13 22:57 input.tar.gz
[2025-10-14 03:06:01] -rw-r--r--. 1 boinc boinc         0 Oct 13 22:57 boinc_lockfile
[2025-10-14 03:06:01] -rw-r--r--. 1 boinc boinc      2550 Oct 13 22:57 pandaJob.out
[2025-10-14 03:06:01] -rw-------. 1 boinc boinc    972799 Oct 13 23:01 agis_schedconf.cvmfs.json
[2025-10-14 03:06:01] drwx------. 5 boinc boinc      4096 Oct 13 23:01 pilot3
[2025-10-14 03:06:01] -rw-------. 1 boinc boinc 193702367 Oct 14 03:01 HITS.46676269._091225.pool.root.1
[2025-10-14 03:06:01] -rw-r--r--. 1 boinc boinc       530 Oct 14 03:02 boinc_task_state.xml
[2025-10-14 03:06:01] -rw-------. 1 boinc boinc      1014 Oct 14 03:03 memory_monitor_summary.json
[2025-10-14 03:06:01] -rw-------. 1 boinc boinc   1560580 Oct 14 03:03 agis_ddmendpoints.agis.ALL.json
[2025-10-14 03:06:01] -rw-------. 1 boinc boinc    471558 Oct 14 03:03 log.46676269._091225.job.log.tgz.1
[2025-10-14 03:06:01] -rw-------. 1 boinc boinc      7797 Oct 14 03:04 heartbeat.json
[2025-10-14 03:06:01] -rw-------. 1 boinc boinc        95 Oct 14 03:05 pilot_heartbeat.json
[2025-10-14 03:06:01] -rw-r--r--. 1 boinc boinc      8192 Oct 14 03:05 boinc_mmap_file
[2025-10-14 03:06:01] -rw-------. 1 boinc boinc      4956 Oct 14 03:05 pilotlog.txt
[2025-10-14 03:06:01] -rw-r--r--. 1 boinc boinc        28 Oct 14 03:05 wrapper_checkpoint.txt
[2025-10-14 03:06:01] -rw-------. 1 boinc boinc   1948808 Oct 14 03:05 log.46676269._091225.job.log.1
[2025-10-14 03:06:01] -rw-------. 1 boinc boinc       357 Oct 14 03:06 output.list
[2025-10-14 03:06:01] -rw-r--r--. 1 boinc boinc       620 Oct 14 03:06 runtime_log
[2025-10-14 03:06:01] -rw-------. 1 boinc boinc   2437120 Oct 14 03:06 result.tar.gz
[2025-10-14 03:06:01] -rw-r--r--. 1 boinc boinc      8703 Oct 14 03:06 runtime_log.err
[2025-10-14 03:06:01] -rw-------. 1 boinc boinc       657 Oct 14 03:06 3ZHODmprJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm4BVMDmrTCYIn.diag
[2025-10-14 03:06:01] -rw-r--r--. 1 boinc boinc     20734 Oct 14 03:06 stderr.txt
[2025-10-14 03:06:01] HITS file was successfully produced:
[2025-10-14 03:06:01] -rw-------. 1 boinc boinc 193702367 Oct 14 03:01 shared/HITS.pool.root.1
[2025-10-14 03:06:01]  *** Contents of shared directory: ***
[2025-10-14 03:06:01] total 407440
[2025-10-14 03:06:01] -rw-r--r--. 2 boinc boinc 220486928 Oct 13 22:57 ATLAS.root_0
[2025-10-14 03:06:01] -rw-r--r--. 2 boinc boinc     15120 Oct 13 22:57 start_atlas.sh
[2025-10-14 03:06:01] -rw-r--r--. 2 boinc boinc    569677 Oct 13 22:57 input.tar.gz
[2025-10-14 03:06:01] -rw-------. 1 boinc boinc 193702367 Oct 14 03:01 HITS.pool.root.1
[2025-10-14 03:06:01] -rw-------. 1 boinc boinc   2437120 Oct 14 03:06 result.tar.gz
03:06:02 (24439): run_atlas exited; CPU time 53391.706892
03:06:02 (24439): called boinc_finish(0)

</stderr_txt>
]]>

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