Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:36:07 (23601): wrapper (7.7.26015): starting
07:36:07 (23601): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 07:36:07] Arguments: --nthreads 8
[2025-10-13 07:36:07] Threads: 8
[2025-10-13 07:36:07] Checking for CVMFS
[2025-10-13 07:36:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:36:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:36:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:36:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:36:08] 2.11.2.0 8814 54249 114888 151660 2 57 18361796 18432000 1833 130560 0 49787314 99.974 2432874 39804 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 07:36:08] CVMFS is ok
[2025-10-13 07:36:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:36:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 07:36:08] Further information can be found at the LHC@home message board.
[2025-10-13 07:36:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:36:08] Checking for apptainer binary...
[2025-10-13 07:36:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:36:08] Running /usr/bin/apptainer --version
[2025-10-13 07:36:08] apptainer version 1.3.2-1.el7
[2025-10-13 07:36:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:36:08] c-206-19.aglt2.org
[2025-10-13 07:36:08] apptainer works
[2025-10-13 07:36:08] Set ATHENA_PROC_NUMBER=8
[2025-10-13 07:36:08] Set ATHENA_CORE_NUMBER=8
[2025-10-13 07:36:08] Starting ATLAS job with PandaID=6842875067
[2025-10-13 07:36:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:53:38]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:53:38] 2025-10-13 13:52:43,090 | INFO     | monitor loop #612: job 0:6842875067 is in state 'finished'
[2025-10-13 09:53:38] 2025-10-13 13:52:43,090 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 09:53:38] 2025-10-13 13:52:44,330 | INFO     | time since job start (8184s) is within the limit (172800.0s)
[2025-10-13 09:53:38] 2025-10-13 13:52:44,404 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 09:53:38] 2025-10-13 13:52:44,410 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1640.375
[2025-10-13 09:53:38] 2025-10-13 13:52:44,413 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6842875067/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 09:53:38] 2025-10-13 13:52:44,413 | INFO     | extracted standard info from prmon json
[2025-10-13 09:53:38] 2025-10-13 13:52:44,413 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 09:53:38] 2025-10-13 13:52:44,414 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 09:53:38] 2025-10-13 13:52:44,414 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 09:53:38] 2025-10-13 13:52:44,414 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 09:53:38] 2025-10-13 13:52:44,416 | INFO     | fitting pss+swap vs Time
[2025-10-13 09:53:38] 2025-10-13 13:52:44,416 | INFO     | sum of square deviations: 746051197.5
[2025-10-13 09:53:38] 2025-10-13 13:52:44,417 | INFO     | sum of deviations: -766204926.5000001
[2025-10-13 09:53:38] 2025-10-13 13:52:44,417 | INFO     | mean x: 1760359461.5
[2025-10-13 09:53:38] 2025-10-13 13:52:44,417 | INFO     | mean y: 2523416.6343283583
[2025-10-13 09:53:38] 2025-10-13 13:52:44,417 | INFO     | -- intersect: 1810436997.2732594
[2025-10-13 09:53:38] 2025-10-13 13:52:44,418 | INFO     | intersect: 1810436997.2732594
[2025-10-13 09:53:38] 2025-10-13 13:52:44,418 | INFO     | chi2: 1.550227668695434
[2025-10-13 09:53:38] 2025-10-13 13:52:44,418 | INFO     | sum of square deviations: 665612480.0
[2025-10-13 09:53:38] 2025-10-13 13:52:44,419 | INFO     | sum of deviations: -563006758.9999982
[2025-10-13 09:53:38] 2025-10-13 13:52:44,419 | INFO     | mean x: 1760359309.0
[2025-10-13 09:53:38] 2025-10-13 13:52:44,419 | INFO     | mean y: 2523802.0465116277
[2025-10-13 09:53:38] 2025-10-13 13:52:44,419 | INFO     | -- intersect: 1491519605.1834457
[2025-10-13 09:53:38] 2025-10-13 13:52:44,419 | INFO     | intersect: 1491519605.1834457
[2025-10-13 09:53:38] 2025-10-13 13:52:44,419 | INFO     | chi2: 1.5507212150445528
[2025-10-13 09:53:38] 2025-10-13 13:52:44,419 | INFO     | current chi2=1.5507212150445528 (change=-0.031837023624681327 %)
[2025-10-13 09:53:38] 2025-10-13 13:52:44,420 | INFO     | right removable region: 128
[2025-10-13 09:53:38] 2025-10-13 13:52:44,420 | INFO     | sum of square deviations: 665612480.0
[2025-10-13 09:53:38] 2025-10-13 13:52:44,420 | INFO     | sum of deviations: -20131641205.0
[2025-10-13 09:53:38] 2025-10-13 13:52:44,420 | INFO     | mean x: 1760359614.0
[2025-10-13 09:53:38] 2025-10-13 13:52:44,421 | INFO     | mean y: 2559494.697674419
[2025-10-13 09:53:38] 2025-10-13 13:52:44,421 | INFO     | -- intersect: 53245143138.59254
[2025-10-13 09:53:38] 2025-10-13 13:52:44,421 | INFO     | intersect: 53245143138.59254
[2025-10-13 09:53:38] 2025-10-13 13:52:44,421 | INFO     | chi2: 0.150844264897714
[2025-10-13 09:53:38] 2025-10-13 13:52:44,421 | INFO     | current chi2=0.150844264897714 (change=90.26954118135086 %)
[2025-10-13 09:53:38] 2025-10-13 13:52:44,421 | INFO     | sum of square deviations: 591173875.0
[2025-10-13 09:53:38] 2025-10-13 13:52:44,422 | INFO     | sum of deviations: -19705186972.0
[2025-10-13 09:53:38] 2025-10-13 13:52:44,422 | INFO     | mean x: 1760359766.5
[2025-10-13 09:53:38] 2025-10-13 13:52:44,422 | INFO     | mean y: 2558506.709677419
[2025-10-13 09:53:38] 2025-10-13 13:52:44,422 | INFO     | -- intersect: 58679404361.693985
[2025-10-13 09:53:38] 2025-10-13 13:52:44,422 | INFO     | intersect: 58679404361.693985
[2025-10-13 09:53:38] 2025-10-13 13:52:44,423 | INFO     | chi2: 0.1291311050676499
[2025-10-13 09:53:38] 2025-10-13 13:52:44,423 | INFO     | current chi2=0.1291311050676499 (change=14.394421852754935 %)
[2025-10-13 09:53:38] 2025-10-13 13:52:44,423 | INFO     | left removable region: 20
[2025-10-13 09:53:38] 2025-10-13 13:52:44,423 | INFO     | sum of square deviations: 390582207.0
[2025-10-13 09:53:38] 2025-10-13 13:52:44,424 | INFO     | sum of deviations: -11951860967.0
[2025-10-13 09:53:38] 2025-10-13 13:52:44,424 | INFO     | mean x: 1760359888.5
[2025-10-13 09:53:38] 2025-10-13 13:52:44,424 | INFO     | mean y: 2543422.6296296297
[2025-10-13 09:53:38] 2025-10-13 13:52:44,424 | INFO     | -- intersect: 53869760777.04337
[2025-10-13 09:53:38] 2025-10-13 13:52:44,424 | INFO     | intersect: 53869760777.04337
[2025-10-13 09:53:38] 2025-10-13 13:52:44,424 | INFO     | chi2: 0.11382209258862465
[2025-10-13 09:53:38] 2025-10-13 13:52:44,424 | INFO     | -- intersect: 53869760777.04337
[2025-10-13 09:53:38] 2025-10-13 13:52:44,425 | INFO     | current memory leak: -30.60 B/s (using 108 data points, chi2=0.11)
[2025-10-13 09:53:38] 2025-10-13 13:52:44,425 | INFO     | could have reported an average CPU frequency of 2257 MHz (8 samples)
[2025-10-13 09:53:38] 2025-10-13 13:52:44,425 | INFO     | ..............................
[2025-10-13 09:53:38] 2025-10-13 13:52:44,425 | INFO     | . Timing measurements:
[2025-10-13 09:53:38] 2025-10-13 13:52:44,425 | INFO     | . get job = 0 s
[2025-10-13 09:53:38] 2025-10-13 13:52:44,425 | INFO     | . initial setup = 2 s
[2025-10-13 09:53:38] 2025-10-13 13:52:44,425 | INFO     | . payload setup = 4 s
[2025-10-13 09:53:38] 2025-10-13 13:52:44,425 | INFO     | . stage-in = 0 s
[2025-10-13 09:53:38] 2025-10-13 13:52:44,426 | INFO     | . payload execution = 8149 s
[2025-10-13 09:53:38] 2025-10-13 13:52:44,426 | INFO     | . stage-out = 0 s
[2025-10-13 09:53:38] 2025-10-13 13:52:44,426 | INFO     | . log creation = 0 s
[2025-10-13 09:53:38] 2025-10-13 13:52:44,426 | INFO     | ..............................
[2025-10-13 09:53:38] 2025-10-13 13:52:44,508 | INFO     | 
[2025-10-13 09:53:38] 2025-10-13 13:52:44,508 | INFO     | job summary report
[2025-10-13 09:53:38] 2025-10-13 13:52:44,508 | INFO     | --------------------------------------------------
[2025-10-13 09:53:38] 2025-10-13 13:52:44,509 | INFO     | PanDA job id: 6842875067
[2025-10-13 09:53:38] 2025-10-13 13:52:44,509 | INFO     | task id: 46676269
[2025-10-13 09:53:38] 2025-10-13 13:52:44,509 | INFO     | errors: (none)
[2025-10-13 09:53:38] 2025-10-13 13:52:44,509 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:53:38] 2025-10-13 13:52:44,509 | INFO     | pilot state: finished 
[2025-10-13 09:53:38] 2025-10-13 13:52:44,509 | INFO     | transexitcode: 0
[2025-10-13 09:53:38] 2025-10-13 13:52:44,510 | INFO     | exeerrorcode: 0
[2025-10-13 09:53:38] 2025-10-13 13:52:44,510 | INFO     | exeerrordiag: 
[2025-10-13 09:53:38] 2025-10-13 13:52:44,510 | INFO     | exitcode: 0
[2025-10-13 09:53:38] 2025-10-13 13:52:44,510 | INFO     | exitmsg: OK
[2025-10-13 09:53:38] 2025-10-13 13:52:44,510 | INFO     | cpuconsumptiontime: 60702 s
[2025-10-13 09:53:38] 2025-10-13 13:52:44,510 | INFO     | nevents: 400
[2025-10-13 09:53:38] 2025-10-13 13:52:44,511 | INFO     | neventsw: 0
[2025-10-13 09:53:38] 2025-10-13 13:52:44,511 | INFO     | pid: 2398
[2025-10-13 09:53:38] 2025-10-13 13:52:44,511 | INFO     | pgrp: 2398
[2025-10-13 09:53:38] 2025-10-13 13:52:44,511 | INFO     | corecount: 8
[2025-10-13 09:53:38] 2025-10-13 13:52:44,511 | INFO     | event service: False
[2025-10-13 09:53:38] 2025-10-13 13:52:44,511 | INFO     | sizes: {0: 2347926, 1: 2348782, 2: 2348782, 5: 2349072, 12: 2349128, 8158: 2377028, 8159: 2386026, 8162: 2386082, 8169: 2386276}
[2025-10-13 09:53:38] 2025-10-13 13:52:44,511 | INFO     | --------------------------------------------------
[2025-10-13 09:53:38] 2025-10-13 13:52:44,511 | INFO     | 
[2025-10-13 09:53:38] 2025-10-13 13:52:44,511 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 09:53:38] 2025-10-13 13:52:44,534 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:53:38] 2025-10-13 13:52:44,535 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:53:38] 2025-10-13 13:52:44,535 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:53:38] 2025-10-13 13:52:44,535 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:53:38] 2025-10-13 13:52:44,535 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:53:38] 2025-10-13 13:52:44,535 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:53:38] 2025-10-13 13:52:44,535 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:53:38] 2025-10-13 13:52:44,536 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:53:38] 2025-10-13 13:52:44,536 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:53:38] 2025-10-13 13:52:44,536 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:53:38] 2025-10-13 13:52:44,536 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:53:38] 2025-10-13 13:52:44,536 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:53:38] 2025-10-13 13:52:44,536 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:53:38] 2025-10-13 13:52:44,537 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:53:38] 2025-10-13 13:52:44,537 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:53:38] 2025-10-13 13:52:44,537 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:53:38] 2025-10-13 13:52:44,537 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:53:38] 2025-10-13 13:52:44,537 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:53:38] 2025-10-13 13:52:44,537 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:53:38] 2025-10-13 13:52:44,538 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:53:38] 2025-10-13 13:52:44,538 | INFO     | job 6842875067 has completed (purged errors)
[2025-10-13 09:53:38] 2025-10-13 13:52:44,538 | INFO     | overall cleanup function is called
[2025-10-13 09:53:38] 2025-10-13 13:52:45,546 | INFO     | --- collectZombieJob: --- 10, [2398]
[2025-10-13 09:53:38] 2025-10-13 13:52:45,547 | INFO     | zombie collector waiting for pid 2398
[2025-10-13 09:53:38] 2025-10-13 13:52:45,547 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:53:38] 2025-10-13 13:52:45,547 | INFO     | collected zombie processes
[2025-10-13 09:53:38] 2025-10-13 13:52:45,547 | INFO     | will attempt to kill all subprocesses of pid=2398
[2025-10-13 09:53:38] 2025-10-13 13:52:45,644 | INFO     | process IDs to be killed: [2398] (in reverse order)
[2025-10-13 09:53:38] 2025-10-13 13:52:45,697 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:53:38] 2025-10-13 13:52:45,697 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:53:38] 2025-10-13 13:52:45,701 | INFO     | did not find any defunct processes belonging to 2398
[2025-10-13 09:53:38] 2025-10-13 13:52:45,703 | INFO     | did not find any defunct processes belonging to 2398
[2025-10-13 09:53:38] 2025-10-13 13:52:45,703 | INFO     | ready for new job
[2025-10-13 09:53:38] 2025-10-13 13:52:45,704 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:53:38] 2025-10-13 13:52:45,705 | INFO     | ***************************************
[2025-10-13 09:53:38] 2025-10-13 13:52:45,705 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:53:38] 2025-10-13 13:52:45,705 | INFO     | ***************************************
[2025-10-13 09:53:38] 2025-10-13 13:52:45,705 | INFO     | 
[2025-10-13 09:53:38] 2025-10-13 13:52:45,706 | INFO     | architecture information:
[2025-10-13 09:53:38] 2025-10-13 13:52:45,707 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:53:38] 2025-10-13 13:52:45,721 | INFO     | cat /etc/os-release:
[2025-10-13 09:53:38] NAME="CentOS Linux"
[2025-10-13 09:53:38] VERSION="7 (Core)"
[2025-10-13 09:53:38] ID="centos"
[2025-10-13 09:53:38] ID_LIKE="rhel fedora"
[2025-10-13 09:53:38] VERSION_ID="7"
[2025-10-13 09:53:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:53:38] ANSI_COLOR="0;31"
[2025-10-13 09:53:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:53:38] HOME_URL="https://www.centos.org/"
[2025-10-13 09:53:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:53:38] 
[2025-10-13 09:53:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:53:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:53:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:53:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:53:38] 
[2025-10-13 09:53:38] 2025-10-13 13:52:45,721 | INFO     | ***************************************
[2025-10-13 09:53:38] 2025-10-13 13:52:46,224 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 09:53:38] 2025-10-13 13:52:46,240 | INFO     | sufficient remaining disk space (29189210112 B)
[2025-10-13 09:53:38] 2025-10-13 13:52:46,240 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:53:38] 2025-10-13 13:52:46,241 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:53:38] 2025-10-13 13:52:46,241 | INFO     | update_server=False
[2025-10-13 09:53:38] 2025-10-13 13:52:46,241 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:53:38] 2025-10-13 13:52:46,241 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:53:38] 2025-10-13 13:52:46,242 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 09:53:38] 2025-10-13 13:52:46,242 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:53:38] 2025-10-13 13:52:46,242 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:53:38] 2025-10-13 13:52:46,243 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:53:38] 2025-10-13 13:52:46,243 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:53:38] 2025-10-13 13:52:46,599 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:53:38] 2025-10-13 13:52:46,599 | INFO     | aborting loop
[2025-10-13 09:53:38] 2025-10-13 13:52:46,962 | INFO     | all data control threads have been joined
[2025-10-13 09:53:38] 2025-10-13 13:52:47,247 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:53:38] 2025-10-13 13:52:47,247 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:53:38] 2025-10-13 13:52:47,371 | INFO     | [job] validate thread has finished
[2025-10-13 09:53:38] 2025-10-13 13:52:47,452 | INFO     | all payload control threads have been joined
[2025-10-13 09:53:38] 2025-10-13 13:52:47,488 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:53:38] 2025-10-13 13:52:47,600 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:53:38] 2025-10-13 13:52:47,747 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:53:38] 2025-10-13 13:52:47,776 | INFO     | all job control threads have been joined
[2025-10-13 09:53:38] 2025-10-13 13:52:47,904 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:53:38] 2025-10-13 13:52:47,968 | INFO     | [data] control thread has finished
[2025-10-13 09:53:38] 2025-10-13 13:52:48,068 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:53:38] 2025-10-13 13:52:48,104 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:53:38] 2025-10-13 13:52:48,214 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:53:38] 2025-10-13 13:52:48,248 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:53:38] 2025-10-13 13:52:48,458 | INFO     | [payload] control thread has finished
[2025-10-13 09:53:38] 2025-10-13 13:52:48,649 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:53:38] 2025-10-13 13:52:48,782 | INFO     | [job] control thread has finished
[2025-10-13 09:53:38] 2025-10-13 13:52:52,074 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:53:38] 2025-10-13 13:52:56,358 | INFO     | job.realtimelogging is not enabled
[2025-10-13 09:53:38] 2025-10-13 13:52:57,363 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:53:38] 2025-10-13 13:53:31,684 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:53:38] 2025-10-13 13:53:33,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140244693350208)>', '<ExcThread(monitor, started 140244389172992)>']
[2025-10-13 09:53:38] 2025-10-13 13:53:33,472 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:53:38] 2025-10-13 13:53:33,472 | INFO     | [monitor] control thread has ended
[2025-10-13 09:53:38] 2025-10-13 13:53:38,419 | INFO     | all workflow threads have been joined
[2025-10-13 09:53:38] 2025-10-13 13:53:38,419 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:53:38] 2025-10-13 13:53:38,425 | INFO     | traces error code: 0
[2025-10-13 09:53:38] 2025-10-13 13:53:38,425 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:53:38] 2025-10-13 13:53:38,530 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:53:38] 2025-10-13 13:53:38,534 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:53:38] 2025-10-13 13:53:38,538 [wrapper] pilotpid: 28166
[2025-10-13 09:53:38] 2025-10-13 13:53:38,542 [wrapper] Pilot exit status: 0
[2025-10-13 09:53:38] 2025-10-13 13:53:38,557 [wrapper] pandaids: 6842875067
[2025-10-13 09:53:38] 2025-10-13 13:53:38,602 [wrapper] cleanup supervisor_pilot 25524 28167
[2025-10-13 09:53:38] 2025-10-13 13:53:38,607 [wrapper] Test setup, not cleaning
[2025-10-13 09:53:38] 2025-10-13 13:53:38,611 [wrapper] apfmon messages muted
[2025-10-13 09:53:38] 2025-10-13 13:53:38,615 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:53:38] 2025-10-13 13:53:38,618 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:53:38]  *** Error codes and diagnostics ***
[2025-10-13 09:53:38]     "exeErrorCode": 0,
[2025-10-13 09:53:38]     "exeErrorDiag": "",
[2025-10-13 09:53:38]     "pilotErrorCode": 0,
[2025-10-13 09:53:38]     "pilotErrorDiag": "",
[2025-10-13 09:53:38]  *** Listing of results directory ***
[2025-10-13 09:53:38] total 409992
[2025-10-13 09:53:38] -rw-r--r-- 1 boincer umatlas    557409 Oct 13 07:13 pilot3.tar.gz
[2025-10-13 09:53:38] -rw-r--r-- 1 boincer umatlas      5112 Oct 13 07:33 queuedata.json
[2025-10-13 09:53:38] -rwx------ 1 boincer umatlas     36292 Oct 13 07:35 runpilot2-wrapper.sh
[2025-10-13 09:53:38] -rw-r--r-- 1 boincer umatlas       100 Oct 13 07:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:53:38] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 07:36 run_atlas
[2025-10-13 09:53:38] -rw-r--r-- 1 boincer umatlas       105 Oct 13 07:36 job.xml
[2025-10-13 09:53:38] -rw-r--r-- 2 boincer umatlas 221234308 Oct 13 07:36 EVNT.46676267._004370.pool.root.1
[2025-10-13 09:53:38] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 07:36 start_atlas.sh
[2025-10-13 09:53:38] drwxrwx--x 2 boincer umatlas      4096 Oct 13 07:36 shared
[2025-10-13 09:53:38] -rw-r--r-- 2 boincer umatlas    569686 Oct 13 07:36 input.tar.gz
[2025-10-13 09:53:38] -rw-r--r-- 1 boincer umatlas         0 Oct 13 07:36 boinc_lockfile
[2025-10-13 09:53:38] -rw-r--r-- 1 boincer umatlas      2548 Oct 13 07:36 pandaJob.out
[2025-10-13 09:53:38] -rw------- 1 boincer umatlas    972497 Oct 13 07:36 agis_schedconf.cvmfs.json
[2025-10-13 09:53:38] -rw------- 1 boincer umatlas   1560580 Oct 13 07:36 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:53:38] drwx------ 5 boincer umatlas      4096 Oct 13 07:36 pilot3
[2025-10-13 09:53:38] -rw-r--r-- 1 boincer umatlas      5952 Oct 13 09:47 init_data.xml
[2025-10-13 09:53:38] -rw------- 1 boincer umatlas 191627539 Oct 13 09:52 HITS.46676269._096740.pool.root.1
[2025-10-13 09:53:38] -rw------- 1 boincer umatlas        95 Oct 13 09:52 pilot_heartbeat.json
[2025-10-13 09:53:38] -rw-r--r-- 1 boincer umatlas       529 Oct 13 09:52 boinc_task_state.xml
[2025-10-13 09:53:38] -rw------- 1 boincer umatlas      1065 Oct 13 09:52 memory_monitor_summary.json
[2025-10-13 09:53:38] -rw------- 1 boincer umatlas    368631 Oct 13 09:52 log.46676269._096740.job.log.tgz.1
[2025-10-13 09:53:38] -rw------- 1 boincer umatlas      7858 Oct 13 09:52 heartbeat.json
[2025-10-13 09:53:38] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 09:53 boinc_mmap_file
[2025-10-13 09:53:38] -rw-r--r-- 1 boincer umatlas        27 Oct 13 09:53 wrapper_checkpoint.txt
[2025-10-13 09:53:38] -rw------- 1 boincer umatlas      4624 Oct 13 09:53 pilotlog.txt
[2025-10-13 09:53:38] -rw------- 1 boincer umatlas   1166180 Oct 13 09:53 log.46676269._096740.job.log.1
[2025-10-13 09:53:38] -rw------- 1 boincer umatlas       357 Oct 13 09:53 output.list
[2025-10-13 09:53:38] -rw-r--r-- 1 boincer umatlas       620 Oct 13 09:53 runtime_log
[2025-10-13 09:53:38] -rw------- 1 boincer umatlas   1556480 Oct 13 09:53 result.tar.gz
[2025-10-13 09:53:38] -rw------- 1 boincer umatlas       658 Oct 13 09:53 UIdMDm00VS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmzjVMDm50He1n.diag
[2025-10-13 09:53:38] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 09:53 runtime_log.err
[2025-10-13 09:53:38] -rw-r--r-- 1 boincer umatlas     21008 Oct 13 09:53 stderr.txt
[2025-10-13 09:53:38] HITS file was successfully produced:
[2025-10-13 09:53:38] -rw------- 1 boincer umatlas 191627539 Oct 13 09:52 shared/HITS.pool.root.1
[2025-10-13 09:53:38]  *** Contents of shared directory: ***
[2025-10-13 09:53:38] total 405292
[2025-10-13 09:53:38] -rw-r--r-- 2 boincer umatlas 221234308 Oct 13 07:36 ATLAS.root_0
[2025-10-13 09:53:38] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 07:36 start_atlas.sh
[2025-10-13 09:53:38] -rw-r--r-- 2 boincer umatlas    569686 Oct 13 07:36 input.tar.gz
[2025-10-13 09:53:38] -rw------- 1 boincer umatlas 191627539 Oct 13 09:52 HITS.pool.root.1
[2025-10-13 09:53:38] -rw------- 1 boincer umatlas   1556480 Oct 13 09:53 result.tar.gz
09:53:40 (23601): run_atlas exited; CPU time 60665.797369
09:53:40 (23601): called boinc_finish(0)

</stderr_txt>
]]>

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