Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:29:28 (852882): wrapper (7.7.26015): starting
07:29:28 (852882): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 07:29:28] Arguments: --nthreads 8
[2025-10-13 07:29:28] Threads: 8
[2025-10-13 07:29:28] Checking for CVMFS
[2025-10-13 07:29:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:29:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:29:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:29:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:29:29] 2.13.2.0 194911 130643 244460 151660 1 196 21674357 32935937 16128 16776704 0 107927537 99.672 93720327 30084 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 07:29:29] CVMFS is ok
[2025-10-13 07:29:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:29:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 07:29:29] Further information can be found at the LHC@home message board.
[2025-10-13 07:29:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:29:29] Checking for apptainer binary...
[2025-10-13 07:29:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:29:29] Running /usr/bin/apptainer --version
[2025-10-13 07:29:29] apptainer version 1.4.3-1.el9
[2025-10-13 07:29:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:29:29] c-4-37.aglt2.org
[2025-10-13 07:29:29] apptainer works
[2025-10-13 07:29:29] Set ATHENA_PROC_NUMBER=8
[2025-10-13 07:29:29] Set ATHENA_CORE_NUMBER=8
[2025-10-13 07:29:29] Starting ATLAS job with PandaID=6842862433
[2025-10-13 07:29:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:11:14]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:11:14] 2025-10-13 15:10:40,476 | INFO     | chi2: 2.700992799610224
[2025-10-13 11:11:14] 2025-10-13 15:10:40,476 | INFO     | sum of square deviations: 2913111811.744078
[2025-10-13 11:11:14] 2025-10-13 15:10:40,478 | INFO     | sum of deviations: 59723126014.16113
[2025-10-13 11:11:14] 2025-10-13 15:10:40,478 | INFO     | mean x: 1760361470.3459716
[2025-10-13 11:11:14] 2025-10-13 15:10:40,478 | INFO     | mean y: 2149256.18957346
[2025-10-13 11:11:14] 2025-10-13 15:10:40,478 | INFO     | -- intersect: -36087879797.99994
[2025-10-13 11:11:14] 2025-10-13 15:10:40,478 | INFO     | intersect: -36087879797.99994
[2025-10-13 11:11:14] 2025-10-13 15:10:40,479 | INFO     | chi2: 2.691427182231133
[2025-10-13 11:11:14] 2025-10-13 15:10:40,479 | INFO     | current chi2=2.691427182231133 (change=0.3541519022365268 %)
[2025-10-13 11:11:14] 2025-10-13 15:10:40,479 | INFO     | right removable region: 210
[2025-10-13 11:11:14] 2025-10-13 15:10:40,479 | INFO     | sum of square deviations: 2913080213.4312906
[2025-10-13 11:11:14] 2025-10-13 15:10:40,481 | INFO     | sum of deviations: 17615572655.72512
[2025-10-13 11:11:14] 2025-10-13 15:10:40,481 | INFO     | mean x: 1760361775.3412323
[2025-10-13 11:11:14] 2025-10-13 15:10:40,481 | INFO     | mean y: 2179008.36492891
[2025-10-13 11:11:14] 2025-10-13 15:10:40,481 | INFO     | -- intersect: -10642835368.825392
[2025-10-13 11:11:14] 2025-10-13 15:10:40,481 | INFO     | intersect: -10642835368.825392
[2025-10-13 11:11:14] 2025-10-13 15:10:40,482 | INFO     | chi2: 0.5118040813159567
[2025-10-13 11:11:14] 2025-10-13 15:10:40,482 | INFO     | current chi2=0.5118040813159567 (change=81.05126080344182 %)
[2025-10-13 11:11:14] 2025-10-13 15:10:40,482 | INFO     | sum of square deviations: 2710862681.0291133
[2025-10-13 11:11:14] 2025-10-13 15:10:40,483 | INFO     | sum of deviations: 2540831766.058251
[2025-10-13 11:11:14] 2025-10-13 15:10:40,484 | INFO     | mean x: 1760361927.8446603
[2025-10-13 11:11:14] 2025-10-13 15:10:40,484 | INFO     | mean y: 2190344.6893203883
[2025-10-13 11:11:14] 2025-10-13 15:10:40,484 | INFO     | -- intersect: -1647758041.6041794
[2025-10-13 11:11:14] 2025-10-13 15:10:40,484 | INFO     | intersect: -1647758041.6041794
[2025-10-13 11:11:14] 2025-10-13 15:10:40,484 | INFO     | chi2: 0.2689652043609768
[2025-10-13 11:11:14] 2025-10-13 15:10:40,484 | INFO     | current chi2=0.2689652043609768 (change=47.447624163252016 %)
[2025-10-13 11:11:14] 2025-10-13 15:10:40,485 | INFO     | sum of square deviations: 2518214157.920408
[2025-10-13 11:11:14] 2025-10-13 15:10:40,486 | INFO     | sum of deviations: -8262469181.293525
[2025-10-13 11:11:14] 2025-10-13 15:10:40,486 | INFO     | mean x: 1760362080.3532338
[2025-10-13 11:11:14] 2025-10-13 15:10:40,487 | INFO     | mean y: 2198871.9900497515
[2025-10-13 11:11:14] 2025-10-13 15:10:40,487 | INFO     | -- intersect: 5778092630.3064
[2025-10-13 11:11:14] 2025-10-13 15:10:40,487 | INFO     | intersect: 5778092630.3064
[2025-10-13 11:11:14] 2025-10-13 15:10:40,487 | INFO     | chi2: 0.12813031802760178
[2025-10-13 11:11:14] 2025-10-13 15:10:40,487 | INFO     | current chi2=0.12813031802760178 (change=52.3617494195871 %)
[2025-10-13 11:11:14] 2025-10-13 15:10:40,488 | INFO     | sum of square deviations: 2334938802.7091713
[2025-10-13 11:11:14] 2025-10-13 15:10:40,489 | INFO     | sum of deviations: -6520073774.540813
[2025-10-13 11:11:14] 2025-10-13 15:10:40,489 | INFO     | mean x: 1760362232.8520408
[2025-10-13 11:11:14] 2025-10-13 15:10:40,489 | INFO     | mean y: 2197412.602040816
[2025-10-13 11:11:14] 2025-10-13 15:10:40,489 | INFO     | -- intersect: 4917825871.383667
[2025-10-13 11:11:14] 2025-10-13 15:10:40,489 | INFO     | intersect: 4917825871.383667
[2025-10-13 11:11:14] 2025-10-13 15:10:40,490 | INFO     | chi2: 0.12515656584313936
[2025-10-13 11:11:14] 2025-10-13 15:10:40,490 | INFO     | current chi2=0.12515656584313936 (change=2.3208809829238146 %)
[2025-10-13 11:11:14] 2025-10-13 15:10:40,490 | INFO     | left removable region: 40
[2025-10-13 11:11:14] 2025-10-13 15:10:40,490 | INFO     | sum of square deviations: 1523611073.1529398
[2025-10-13 11:11:14] 2025-10-13 15:10:40,491 | INFO     | sum of deviations: 5968790504.6705885
[2025-10-13 11:11:14] 2025-10-13 15:10:40,492 | INFO     | mean x: 1760362659.8705883
[2025-10-13 11:11:14] 2025-10-13 15:10:40,492 | INFO     | mean y: 2187881.394117647
[2025-10-13 11:11:14] 2025-10-13 15:10:40,492 | INFO     | -- intersect: -6894083820.851193
[2025-10-13 11:11:14] 2025-10-13 15:10:40,492 | INFO     | intersect: -6894083820.851193
[2025-10-13 11:11:14] 2025-10-13 15:10:40,492 | INFO     | chi2: 0.06813217487500224
[2025-10-13 11:11:14] 2025-10-13 15:10:40,492 | INFO     | -- intersect: -6894083820.851193
[2025-10-13 11:11:14] 2025-10-13 15:10:40,492 | INFO     | current memory leak: 3.92 B/s (using 170 data points, chi2=0.07)
[2025-10-13 11:11:14] 2025-10-13 15:10:40,493 | INFO     | could have reported an average CPU frequency of 2601 MHz (11 samples)
[2025-10-13 11:11:14] 2025-10-13 15:10:40,493 | INFO     | ..............................
[2025-10-13 11:11:14] 2025-10-13 15:10:40,493 | INFO     | . Timing measurements:
[2025-10-13 11:11:14] 2025-10-13 15:10:40,494 | INFO     | . get job = 0 s
[2025-10-13 11:11:14] 2025-10-13 15:10:40,494 | INFO     | . initial setup = 3 s
[2025-10-13 11:11:14] 2025-10-13 15:10:40,494 | INFO     | . payload setup = 32 s
[2025-10-13 11:11:14] 2025-10-13 15:10:40,494 | INFO     | . stage-in = 0 s
[2025-10-13 11:11:14] 2025-10-13 15:10:40,494 | INFO     | . payload execution = 13177 s
[2025-10-13 11:11:14] 2025-10-13 15:10:40,494 | INFO     | . stage-out = 2 s
[2025-10-13 11:11:14] 2025-10-13 15:10:40,494 | INFO     | . log creation = 0 s
[2025-10-13 11:11:14] 2025-10-13 15:10:40,494 | INFO     | ..............................
[2025-10-13 11:11:14] 2025-10-13 15:10:40,693 | INFO     | 
[2025-10-13 11:11:14] 2025-10-13 15:10:40,693 | INFO     | job summary report
[2025-10-13 11:11:14] 2025-10-13 15:10:40,693 | INFO     | --------------------------------------------------
[2025-10-13 11:11:14] 2025-10-13 15:10:40,693 | INFO     | PanDA job id: 6842862433
[2025-10-13 11:11:14] 2025-10-13 15:10:40,693 | INFO     | task id: 46676269
[2025-10-13 11:11:14] 2025-10-13 15:10:40,694 | INFO     | errors: (none)
[2025-10-13 11:11:14] 2025-10-13 15:10:40,694 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:11:14] 2025-10-13 15:10:40,694 | INFO     | pilot state: finished 
[2025-10-13 11:11:14] 2025-10-13 15:10:40,694 | INFO     | transexitcode: 0
[2025-10-13 11:11:14] 2025-10-13 15:10:40,694 | INFO     | exeerrorcode: 0
[2025-10-13 11:11:14] 2025-10-13 15:10:40,694 | INFO     | exeerrordiag: 
[2025-10-13 11:11:14] 2025-10-13 15:10:40,694 | INFO     | exitcode: 0
[2025-10-13 11:11:14] 2025-10-13 15:10:40,694 | INFO     | exitmsg: OK
[2025-10-13 11:11:14] 2025-10-13 15:10:40,695 | INFO     | cpuconsumptiontime: 50880 s
[2025-10-13 11:11:14] 2025-10-13 15:10:40,695 | INFO     | nevents: 400
[2025-10-13 11:11:14] 2025-10-13 15:10:40,695 | INFO     | neventsw: 0
[2025-10-13 11:11:14] 2025-10-13 15:10:40,695 | INFO     | pid: 865072
[2025-10-13 11:11:14] 2025-10-13 15:10:40,695 | INFO     | pgrp: 865072
[2025-10-13 11:11:14] 2025-10-13 15:10:40,695 | INFO     | corecount: 8
[2025-10-13 11:11:14] 2025-10-13 15:10:40,695 | INFO     | event service: False
[2025-10-13 11:11:14] 2025-10-13 15:10:40,695 | INFO     | sizes: {0: 2348635, 1: 2348834, 7: 2349096, 12: 2349124, 13213: 2379465, 13217: 2388463, 13220: 2388647, 13227: 2388841}
[2025-10-13 11:11:14] 2025-10-13 15:10:40,696 | INFO     | --------------------------------------------------
[2025-10-13 11:11:14] 2025-10-13 15:10:40,696 | INFO     | 
[2025-10-13 11:11:14] 2025-10-13 15:10:40,696 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 11:11:14] 2025-10-13 15:10:40,719 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:11:14] 2025-10-13 15:10:40,719 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:11:14] 2025-10-13 15:10:40,720 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:11:14] 2025-10-13 15:10:40,720 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:11:14] 2025-10-13 15:10:40,720 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:11:14] 2025-10-13 15:10:40,720 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:11:14] 2025-10-13 15:10:40,720 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:11:14] 2025-10-13 15:10:40,720 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:11:14] 2025-10-13 15:10:40,720 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:11:14] 2025-10-13 15:10:40,720 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:11:14] 2025-10-13 15:10:40,720 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:11:14] 2025-10-13 15:10:40,720 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:11:14] 2025-10-13 15:10:40,721 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:11:14] 2025-10-13 15:10:40,721 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:11:14] 2025-10-13 15:10:40,721 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:11:14] 2025-10-13 15:10:40,721 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:11:14] 2025-10-13 15:10:40,721 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:11:14] 2025-10-13 15:10:40,721 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:11:14] 2025-10-13 15:10:40,721 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:11:14] 2025-10-13 15:10:40,721 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:11:14] 2025-10-13 15:10:40,722 | INFO     | job 6842862433 has completed (purged errors)
[2025-10-13 11:11:14] 2025-10-13 15:10:40,722 | INFO     | overall cleanup function is called
[2025-10-13 11:11:14] 2025-10-13 15:10:41,730 | INFO     | --- collectZombieJob: --- 10, [865072]
[2025-10-13 11:11:14] 2025-10-13 15:10:41,730 | INFO     | zombie collector waiting for pid 865072
[2025-10-13 11:11:14] 2025-10-13 15:10:41,730 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:11:14] 2025-10-13 15:10:41,730 | INFO     | collected zombie processes
[2025-10-13 11:11:14] 2025-10-13 15:10:41,731 | INFO     | will attempt to kill all subprocesses of pid=865072
[2025-10-13 11:11:14] 2025-10-13 15:10:42,012 | INFO     | process IDs to be killed: [865072] (in reverse order)
[2025-10-13 11:11:14] 2025-10-13 15:10:42,101 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:11:14] 2025-10-13 15:10:42,101 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:11:14] 2025-10-13 15:10:42,112 | INFO     | did not find any defunct processes belonging to 865072
[2025-10-13 11:11:14] 2025-10-13 15:10:42,122 | INFO     | did not find any defunct processes belonging to 865072
[2025-10-13 11:11:14] 2025-10-13 15:10:42,122 | INFO     | ready for new job
[2025-10-13 11:11:14] 2025-10-13 15:10:42,122 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:11:14] 2025-10-13 15:10:42,124 | INFO     | ***************************************
[2025-10-13 11:11:14] 2025-10-13 15:10:42,125 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:11:14] 2025-10-13 15:10:42,125 | INFO     | ***************************************
[2025-10-13 11:11:14] 2025-10-13 15:10:42,125 | INFO     | 
[2025-10-13 11:11:14] 2025-10-13 15:10:42,139 | INFO     | architecture information:
[2025-10-13 11:11:14] 2025-10-13 15:10:42,139 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:11:14] 2025-10-13 15:10:42,156 | INFO     | cat /etc/os-release:
[2025-10-13 11:11:14] NAME="CentOS Linux"
[2025-10-13 11:11:14] VERSION="7 (Core)"
[2025-10-13 11:11:14] ID="centos"
[2025-10-13 11:11:14] ID_LIKE="rhel fedora"
[2025-10-13 11:11:14] VERSION_ID="7"
[2025-10-13 11:11:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:11:14] ANSI_COLOR="0;31"
[2025-10-13 11:11:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:11:14] HOME_URL="https://www.centos.org/"
[2025-10-13 11:11:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:11:14] 
[2025-10-13 11:11:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:11:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:11:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:11:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:11:14] 
[2025-10-13 11:11:14] 2025-10-13 15:10:42,157 | INFO     | ***************************************
[2025-10-13 11:11:14] 2025-10-13 15:10:42,659 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 11:11:14] 2025-10-13 15:10:42,677 | INFO     | sufficient remaining disk space (76535562240 B)
[2025-10-13 11:11:14] 2025-10-13 15:10:42,678 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:11:14] 2025-10-13 15:10:42,678 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:11:14] 2025-10-13 15:10:42,678 | INFO     | update_server=False
[2025-10-13 11:11:14] 2025-10-13 15:10:42,678 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:11:14] 2025-10-13 15:10:42,928 | INFO     | all data control threads have been joined
[2025-10-13 11:11:14] 2025-10-13 15:10:43,017 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 11:11:14] 2025-10-13 15:10:43,017 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 11:11:14] 2025-10-13 15:10:43,017 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:11:14] 2025-10-13 15:10:43,017 | INFO     | will abort loop
[2025-10-13 11:11:14] 2025-10-13 15:10:43,349 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:11:14] 2025-10-13 15:10:43,683 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:11:14] 2025-10-13 15:10:43,769 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:11:14] 2025-10-13 15:10:43,772 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:11:14] 2025-10-13 15:10:43,934 | INFO     | [data] control thread has finished
[2025-10-13 11:11:14] 2025-10-13 15:10:43,934 | INFO     | all payload control threads have been joined
[2025-10-13 11:11:14] 2025-10-13 15:10:44,022 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:11:14] 2025-10-13 15:10:44,023 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:11:14] 2025-10-13 15:10:44,060 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:11:14] 2025-10-13 15:10:44,094 | INFO     | all job control threads have been joined
[2025-10-13 11:11:14] 2025-10-13 15:10:44,133 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:11:14] 2025-10-13 15:10:44,358 | INFO     | [job] validate thread has finished
[2025-10-13 11:11:14] 2025-10-13 15:10:44,424 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:11:14] 2025-10-13 15:10:44,936 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:11:14] 2025-10-13 15:10:44,940 | INFO     | [payload] control thread has finished
[2025-10-13 11:11:14] 2025-10-13 15:10:45,042 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:11:14] 2025-10-13 15:10:45,099 | INFO     | [job] control thread has finished
[2025-10-13 11:11:14] 2025-10-13 15:10:45,355 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:11:14] 2025-10-13 15:10:45,609 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:11:14] 2025-10-13 15:10:46,614 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:11:14] 2025-10-13 15:10:47,775 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:11:14] 2025-10-13 15:11:07,988 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:11:14] 2025-10-13 15:11:09,386 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139628901885760)>', '<ExcThread(monitor, started 139628405303040)>']
[2025-10-13 11:11:14] 2025-10-13 15:11:12,752 | INFO     | PID=856564 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 11:11:14] 2025-10-13 15:11:12,752 | INFO     | .. there are 15 such processes running
[2025-10-13 11:11:14] 2025-10-13 15:11:12,752 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:11:14] 2025-10-13 15:11:12,752 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:11:14] 2025-10-13 15:11:12,753 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:11:14] 2025-10-13 15:11:12,753 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:11:14] 2025-10-13 15:11:12,753 | INFO     | [monitor] control thread has ended
[2025-10-13 11:11:14] 2025-10-13 15:11:14,412 | INFO     | all workflow threads have been joined
[2025-10-13 11:11:14] 2025-10-13 15:11:14,412 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:11:14] 2025-10-13 15:11:14,412 | INFO     | traces error code: 0
[2025-10-13 11:11:14] 2025-10-13 15:11:14,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:11:14] 2025-10-13 15:11:14,557 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:11:14] 2025-10-13 15:11:14,561 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:11:14] 2025-10-13 15:11:14,564 [wrapper] pilotpid: 856564
[2025-10-13 11:11:14] 2025-10-13 15:11:14,566 [wrapper] Pilot exit status: 0
[2025-10-13 11:11:14] 2025-10-13 15:11:14,579 [wrapper] pandaids: 6842862433
[2025-10-13 11:11:14] 2025-10-13 15:11:14,637 [wrapper] cleanup supervisor_pilot 1297075 856565
[2025-10-13 11:11:14] 2025-10-13 15:11:14,641 [wrapper] Test setup, not cleaning
[2025-10-13 11:11:14] 2025-10-13 15:11:14,645 [wrapper] apfmon messages muted
[2025-10-13 11:11:14] 2025-10-13 15:11:14,649 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:11:14] 2025-10-13 15:11:14,652 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:11:14]  *** Error codes and diagnostics ***
[2025-10-13 11:11:14]     "exeErrorCode": 0,
[2025-10-13 11:11:14]     "exeErrorDiag": "",
[2025-10-13 11:11:14]     "pilotErrorCode": 0,
[2025-10-13 11:11:14]     "pilotErrorDiag": "",
[2025-10-13 11:11:14]  *** Listing of results directory ***
[2025-10-13 11:11:14] total 415324
[2025-10-13 11:11:14] -rw-r--r--. 1 boincer umatlas    557409 Oct 13 07:13 pilot3.tar.gz
[2025-10-13 11:11:14] -rw-r--r--. 1 boincer umatlas      5112 Oct 13 07:18 queuedata.json
[2025-10-13 11:11:14] -rwx------. 1 boincer umatlas     36292 Oct 13 07:18 runpilot2-wrapper.sh
[2025-10-13 11:11:14] -rw-r--r--. 1 boincer umatlas       100 Oct 13 07:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:11:14] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 07:29 run_atlas
[2025-10-13 11:11:14] -rw-r--r--. 1 boincer umatlas       105 Oct 13 07:29 job.xml
[2025-10-13 11:11:14] -rw-r--r--. 2 boincer umatlas 222357721 Oct 13 07:29 EVNT.46676267._004700.pool.root.1
[2025-10-13 11:11:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 07:29 start_atlas.sh
[2025-10-13 11:11:14] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 07:29 shared
[2025-10-13 11:11:14] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 07:29 input.tar.gz
[2025-10-13 11:11:14] -rw-r--r--. 1 boincer umatlas         0 Oct 13 07:29 boinc_lockfile
[2025-10-13 11:11:14] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 07:29 pandaJob.out
[2025-10-13 11:11:14] -rw-------. 1 boincer umatlas    972497 Oct 13 07:29 agis_schedconf.cvmfs.json
[2025-10-13 11:11:14] drwx------. 5 boincer umatlas      4096 Oct 13 07:29 pilot3
[2025-10-13 11:11:14] -rw-r--r--. 1 boincer umatlas      6659 Oct 13 11:02 init_data.xml
[2025-10-13 11:11:14] -rw-r--r--. 1 boincer umatlas       531 Oct 13 11:09 boinc_task_state.xml
[2025-10-13 11:11:14] -rw-------. 1 boincer umatlas 194581871 Oct 13 11:09 HITS.46676269._096719.pool.root.1
[2025-10-13 11:11:14] -rw-------. 1 boincer umatlas      1050 Oct 13 11:10 memory_monitor_summary.json
[2025-10-13 11:11:14] -rw-------. 1 boincer umatlas   1560580 Oct 13 11:10 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:11:14] -rw-------. 1 boincer umatlas    451637 Oct 13 11:10 log.46676269._096719.job.log.tgz.1
[2025-10-13 11:11:14] -rw-------. 1 boincer umatlas        95 Oct 13 11:10 pilot_heartbeat.json
[2025-10-13 11:11:14] -rw-------. 1 boincer umatlas      7820 Oct 13 11:10 heartbeat.json
[2025-10-13 11:11:14] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 11:11 boinc_mmap_file
[2025-10-13 11:11:14] -rw-r--r--. 1 boincer umatlas        28 Oct 13 11:11 wrapper_checkpoint.txt
[2025-10-13 11:11:14] -rw-------. 1 boincer umatlas      5009 Oct 13 11:11 pilotlog.txt
[2025-10-13 11:11:14] -rw-------. 1 boincer umatlas   1769589 Oct 13 11:11 log.46676269._096719.job.log.1
[2025-10-13 11:11:14] -rw-------. 1 boincer umatlas       357 Oct 13 11:11 output.list
[2025-10-13 11:11:14] -rw-r--r--. 1 boincer umatlas       620 Oct 13 11:11 runtime_log
[2025-10-13 11:11:14] -rw-------. 1 boincer umatlas   2242560 Oct 13 11:11 result.tar.gz
[2025-10-13 11:11:14] -rw-r--r--. 1 boincer umatlas      8694 Oct 13 11:11 runtime_log.err
[2025-10-13 11:11:14] -rw-------. 1 boincer umatlas       653 Oct 13 11:11 1VxLDm2kVS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmllmNDm1JUF5m.diag
[2025-10-13 11:11:14] -rw-r--r--. 1 boincer umatlas     21020 Oct 13 11:11 stderr.txt
[2025-10-13 11:11:14] HITS file was successfully produced:
[2025-10-13 11:11:14] -rw-------. 1 boincer umatlas 194581871 Oct 13 11:09 shared/HITS.pool.root.1
[2025-10-13 11:11:14]  *** Contents of shared directory: ***
[2025-10-13 11:11:14] total 409948
[2025-10-13 11:11:14] -rw-r--r--. 2 boincer umatlas 222357721 Oct 13 07:29 ATLAS.root_0
[2025-10-13 11:11:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 07:29 start_atlas.sh
[2025-10-13 11:11:14] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 07:29 input.tar.gz
[2025-10-13 11:11:14] -rw-------. 1 boincer umatlas 194581871 Oct 13 11:09 HITS.pool.root.1
[2025-10-13 11:11:14] -rw-------. 1 boincer umatlas   2242560 Oct 13 11:11 result.tar.gz
11:11:16 (852882): run_atlas exited; CPU time 51257.042899
11:11:16 (852882): called boinc_finish(0)

</stderr_txt>
]]>

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