Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:14:05 (22395): wrapper (7.7.26015): starting
07:14:05 (22395): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 07:14:05] Arguments: --nthreads 12
[2025-10-13 07:14:05] Threads: 12
[2025-10-13 07:14:05] Checking for CVMFS
[2025-10-13 07:14:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:14:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:14:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:14:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:14:06] 2.11.2.0 2979 224248 105432 151659 1 1 16719664 20275200 1 130560 2 110007880 99.984 13089088 12039 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 07:14:06] CVMFS is ok
[2025-10-13 07:14:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:14:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 07:14:06] Further information can be found at the LHC@home message board.
[2025-10-13 07:14:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:14:06] Checking for apptainer binary...
[2025-10-13 07:14:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:14:06] Running /usr/bin/apptainer --version
[2025-10-13 07:14:06] apptainer version 1.3.2-1.el7
[2025-10-13 07:14:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:14:08] c-205-7.aglt2.org
[2025-10-13 07:14:08] apptainer works
[2025-10-13 07:14:08] Set ATHENA_PROC_NUMBER=12
[2025-10-13 07:14:08] Set ATHENA_CORE_NUMBER=12
[2025-10-13 07:14:08] Starting ATLAS job with PandaID=6837401817
[2025-10-13 07:14:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:30:37]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:30:37]  storage_token=
[2025-10-13 08:30:37]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6837401817/log.46676269._032446.job.log.tgz.1
[2025-10-13 08:30:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2e/1e/log.46676269._032446.job.log.tgz.1
[2025-10-13 08:30:37]  workdir=None
[2025-10-13 08:30:37] ]
[2025-10-13 08:30:37] 2025-10-13 12:29:33,428 | INFO     | transferring file log.46676269._032446.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6837401817/log.46676269._032446.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 08:30:37] 2025-10-13 12:29:33,428 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6837401817/log.46676269._032446.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._032446.job
[2025-10-13 08:30:37] 2025-10-13 12:29:33,450 | INFO     | adding to output.list: log.46676269._032446.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2e/1e/log.46676269._032446.job.log.tg
[2025-10-13 08:30:37] 2025-10-13 12:29:33,451 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 08:30:37] 2025-10-13 12:29:33,452 | INFO     | summary of transferred files:
[2025-10-13 08:30:37] 2025-10-13 12:29:33,452 | INFO     |  -- lfn=log.46676269._032446.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 08:30:37] 2025-10-13 12:29:33,452 | INFO     | stage-out finished correctly
[2025-10-13 08:30:37] 2025-10-13 12:29:34,066 | INFO     | time since job start (4510s) is within the limit (172800.0s)
[2025-10-13 08:30:37] 2025-10-13 12:29:35,038 | WARNING  | process 326 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 08:30:37] 2025-10-13 12:29:35,039 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837401817/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 08:30:37] 2025-10-13 12:29:35,126 | INFO     | number of running child processes to parent process 326: 1
[2025-10-13 08:30:37] 2025-10-13 12:29:35,126 | INFO     | maximum number of monitored processes: 6
[2025-10-13 08:30:37] 2025-10-13 12:29:36,072 | INFO     | time since job start (4512s) is within the limit (172800.0s)
[2025-10-13 08:30:37] 2025-10-13 12:29:36,300 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 08:30:37] 2025-10-13 12:29:37,629 | INFO     | monitor loop #335: job 0:6837401817 is in state 'finished'
[2025-10-13 08:30:37] 2025-10-13 12:29:37,629 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:30:37] 2025-10-13 12:29:38,074 | INFO     | time since job start (4514s) is within the limit (172800.0s)
[2025-10-13 08:30:37] 2025-10-13 12:29:38,991 | INFO     | job 6837401817 has state=finished
[2025-10-13 08:30:37] 2025-10-13 12:29:38,991 | INFO     | preparing for final server update for job 6837401817 in state='finished'
[2025-10-13 08:30:37] 2025-10-13 12:29:38,991 | INFO     | this job has now completed (state=finished)
[2025-10-13 08:30:37] 2025-10-13 12:29:38,991 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 08:30:37] 2025-10-13 12:29:38,992 | INFO     | log transfer has been attempted: DONE
[2025-10-13 08:30:37] 2025-10-13 12:29:38,992 | INFO     | job 6837401817 has finished - writing final server update
[2025-10-13 08:30:37] 2025-10-13 12:29:38,992 | INFO     | total number of processed events: 400 (read)
[2025-10-13 08:30:37] 2025-10-13 12:29:38,993 | INFO     | executing command: lscpu
[2025-10-13 08:30:37] 2025-10-13 12:29:39,020 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 08:30:37] 2025-10-13 12:29:40,079 | INFO     | time since job start (4516s) is within the limit (172800.0s)
[2025-10-13 08:30:37] 2025-10-13 12:29:40,132 | INFO     | monitor loop #336: job 0:6837401817 is in state 'finished'
[2025-10-13 08:30:37] 2025-10-13 12:29:40,132 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:30:37] 2025-10-13 12:29:42,084 | INFO     | time since job start (4518s) is within the limit (172800.0s)
[2025-10-13 08:30:37] 2025-10-13 12:29:42,635 | INFO     | monitor loop #337: job 0:6837401817 is in state 'finished'
[2025-10-13 08:30:37] 2025-10-13 12:29:42,635 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:30:37] 2025-10-13 12:29:43,802 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 08:30:37] 2025-10-13 12:29:43,806 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-13 08:30:37] 2025-10-13 12:29:43,808 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837401817/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 08:30:37] 2025-10-13 12:29:43,808 | INFO     | extracted standard info from prmon json
[2025-10-13 08:30:37] 2025-10-13 12:29:43,808 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 08:30:37] 2025-10-13 12:29:43,809 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 08:30:37] 2025-10-13 12:29:43,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:30:37] 2025-10-13 12:29:43,809 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:30:37] 2025-10-13 12:29:43,810 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:30:37] 2025-10-13 12:29:43,811 | INFO     | sum of square deviations: 93240818.0
[2025-10-13 08:30:37] 2025-10-13 12:29:43,811 | INFO     | sum of deviations: 3467195958.0
[2025-10-13 08:30:37] 2025-10-13 12:29:43,811 | INFO     | mean x: 1760356411.0
[2025-10-13 08:30:37] 2025-10-13 12:29:43,811 | INFO     | mean y: 2707568.880597015
[2025-10-13 08:30:37] 2025-10-13 12:29:43,811 | INFO     | -- intersect: -65456827898.28558
[2025-10-13 08:30:37] 2025-10-13 12:29:43,811 | INFO     | intersect: -65456827898.28558
[2025-10-13 08:30:37] 2025-10-13 12:29:43,812 | INFO     | chi2: 0.11578703066710451
[2025-10-13 08:30:37] 2025-10-13 12:29:43,812 | INFO     | -- intersect: -65456827898.28558
[2025-10-13 08:30:37] 2025-10-13 12:29:43,812 | INFO     | current memory leak: 37.19 B/s (using 67 data points, chi2=0.12)
[2025-10-13 08:30:37] 2025-10-13 12:29:43,812 | INFO     | could have reported an average CPU frequency of 2041 MHz (6 samples)
[2025-10-13 08:30:37] 2025-10-13 12:29:43,812 | INFO     | ..............................
[2025-10-13 08:30:37] 2025-10-13 12:29:43,812 | INFO     | . Timing measurements:
[2025-10-13 08:30:37] 2025-10-13 12:29:43,813 | INFO     | . get job = 0 s
[2025-10-13 08:30:37] 2025-10-13 12:29:43,813 | INFO     | . initial setup = 2 s
[2025-10-13 08:30:37] 2025-10-13 12:29:43,813 | INFO     | . payload setup = 7 s
[2025-10-13 08:30:37] 2025-10-13 12:29:43,813 | INFO     | . stage-in = 0 s
[2025-10-13 08:30:37] 2025-10-13 12:29:43,813 | INFO     | . payload execution = 4480 s
[2025-10-13 08:30:37] 2025-10-13 12:29:43,813 | INFO     | . stage-out = 0 s
[2025-10-13 08:30:37] 2025-10-13 12:29:43,813 | INFO     | . log creation = 0 s
[2025-10-13 08:30:37] 2025-10-13 12:29:43,813 | INFO     | ..............................
[2025-10-13 08:30:37] 2025-10-13 12:29:43,894 | INFO     | 
[2025-10-13 08:30:37] 2025-10-13 12:29:43,895 | INFO     | job summary report
[2025-10-13 08:30:37] 2025-10-13 12:29:43,895 | INFO     | --------------------------------------------------
[2025-10-13 08:30:37] 2025-10-13 12:29:43,895 | INFO     | PanDA job id: 6837401817
[2025-10-13 08:30:37] 2025-10-13 12:29:43,895 | INFO     | task id: 46676269
[2025-10-13 08:30:37] 2025-10-13 12:29:43,895 | INFO     | errors: (none)
[2025-10-13 08:30:37] 2025-10-13 12:29:43,895 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:30:37] 2025-10-13 12:29:43,896 | INFO     | pilot state: finished 
[2025-10-13 08:30:37] 2025-10-13 12:29:43,896 | INFO     | transexitcode: 0
[2025-10-13 08:30:37] 2025-10-13 12:29:43,896 | INFO     | exeerrorcode: 0
[2025-10-13 08:30:37] 2025-10-13 12:29:43,896 | INFO     | exeerrordiag: 
[2025-10-13 08:30:37] 2025-10-13 12:29:43,896 | INFO     | exitcode: 0
[2025-10-13 08:30:37] 2025-10-13 12:29:43,896 | INFO     | exitmsg: OK
[2025-10-13 08:30:37] 2025-10-13 12:29:43,896 | INFO     | cpuconsumptiontime: 46212 s
[2025-10-13 08:30:37] 2025-10-13 12:29:43,896 | INFO     | nevents: 400
[2025-10-13 08:30:37] 2025-10-13 12:29:43,896 | INFO     | neventsw: 0
[2025-10-13 08:30:37] 2025-10-13 12:29:43,896 | INFO     | pid: 326
[2025-10-13 08:30:37] 2025-10-13 12:29:43,897 | INFO     | pgrp: 326
[2025-10-13 08:30:37] 2025-10-13 12:29:43,897 | INFO     | corecount: 12
[2025-10-13 08:30:37] 2025-10-13 12:29:43,897 | INFO     | event service: False
[2025-10-13 08:30:37] 2025-10-13 12:29:43,897 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4491: 2375249, 4493: 2384247, 4495: 2384303, 4503: 2384625}
[2025-10-13 08:30:37] 2025-10-13 12:29:43,897 | INFO     | --------------------------------------------------
[2025-10-13 08:30:37] 2025-10-13 12:29:43,897 | INFO     | 
[2025-10-13 08:30:37] 2025-10-13 12:29:43,897 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 08:30:37] 2025-10-13 12:29:43,919 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:30:37] 2025-10-13 12:29:43,920 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:30:37] 2025-10-13 12:29:43,920 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:30:37] 2025-10-13 12:29:43,920 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:30:37] 2025-10-13 12:29:43,920 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:30:37] 2025-10-13 12:29:43,920 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:30:37] 2025-10-13 12:29:43,921 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:30:37] 2025-10-13 12:29:43,921 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:30:37] 2025-10-13 12:29:43,921 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:30:37] 2025-10-13 12:29:43,921 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:30:37] 2025-10-13 12:29:43,921 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:30:37] 2025-10-13 12:29:43,922 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:30:37] 2025-10-13 12:29:43,922 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:30:37] 2025-10-13 12:29:43,922 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:30:37] 2025-10-13 12:29:43,922 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:30:37] 2025-10-13 12:29:43,922 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:30:37] 2025-10-13 12:29:43,922 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:30:37] 2025-10-13 12:29:43,923 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:30:37] 2025-10-13 12:29:43,923 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:30:37] 2025-10-13 12:29:43,923 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:30:37] 2025-10-13 12:29:43,923 | INFO     | job 6837401817 has completed (purged errors)
[2025-10-13 08:30:37] 2025-10-13 12:29:43,923 | INFO     | overall cleanup function is called
[2025-10-13 08:30:37] 2025-10-13 12:29:44,932 | INFO     | --- collectZombieJob: --- 10, [326]
[2025-10-13 08:30:37] 2025-10-13 12:29:44,932 | INFO     | zombie collector waiting for pid 326
[2025-10-13 08:30:37] 2025-10-13 12:29:44,932 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:30:37] 2025-10-13 12:29:44,932 | INFO     | collected zombie processes
[2025-10-13 08:30:37] 2025-10-13 12:29:44,932 | INFO     | will attempt to kill all subprocesses of pid=326
[2025-10-13 08:30:37] 2025-10-13 12:29:45,027 | INFO     | process IDs to be killed: [326] (in reverse order)
[2025-10-13 08:30:37] 2025-10-13 12:29:45,079 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:30:37] 2025-10-13 12:29:45,080 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:30:37] 2025-10-13 12:29:45,083 | INFO     | did not find any defunct processes belonging to 326
[2025-10-13 08:30:37] 2025-10-13 12:29:45,087 | INFO     | did not find any defunct processes belonging to 326
[2025-10-13 08:30:37] 2025-10-13 12:29:45,087 | INFO     | ready for new job
[2025-10-13 08:30:37] 2025-10-13 12:29:45,087 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:30:37] 2025-10-13 12:29:45,088 | INFO     | ***************************************
[2025-10-13 08:30:37] 2025-10-13 12:29:45,088 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:30:37] 2025-10-13 12:29:45,088 | INFO     | ***************************************
[2025-10-13 08:30:37] 2025-10-13 12:29:45,088 | INFO     | 
[2025-10-13 08:30:37] 2025-10-13 12:29:45,089 | INFO     | architecture information:
[2025-10-13 08:30:37] 2025-10-13 12:29:45,089 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:30:37] 2025-10-13 12:29:45,104 | INFO     | cat /etc/os-release:
[2025-10-13 08:30:37] NAME="CentOS Linux"
[2025-10-13 08:30:37] VERSION="7 (Core)"
[2025-10-13 08:30:37] ID="centos"
[2025-10-13 08:30:37] ID_LIKE="rhel fedora"
[2025-10-13 08:30:37] VERSION_ID="7"
[2025-10-13 08:30:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:30:37] ANSI_COLOR="0;31"
[2025-10-13 08:30:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:30:37] HOME_URL="https://www.centos.org/"
[2025-10-13 08:30:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:30:37] 
[2025-10-13 08:30:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:30:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:30:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:30:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:30:37] 
[2025-10-13 08:30:37] 2025-10-13 12:29:45,104 | INFO     | ***************************************
[2025-10-13 08:30:37] 2025-10-13 12:29:45,607 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 08:30:37] 2025-10-13 12:29:45,624 | INFO     | sufficient remaining disk space (29369565184 B)
[2025-10-13 08:30:37] 2025-10-13 12:29:45,624 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:30:37] 2025-10-13 12:29:45,625 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:30:37] 2025-10-13 12:29:45,625 | INFO     | update_server=False
[2025-10-13 08:30:37] 2025-10-13 12:29:45,625 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:30:37] 2025-10-13 12:29:45,625 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:30:37] 2025-10-13 12:29:45,743 | INFO     | all data control threads have been joined
[2025-10-13 08:30:37] 2025-10-13 12:29:46,143 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:30:37] 2025-10-13 12:29:46,143 | INFO     | aborting loop
[2025-10-13 08:30:37] 2025-10-13 12:29:46,492 | INFO     | all job control threads have been joined
[2025-10-13 08:30:37] 2025-10-13 12:29:46,540 | INFO     | all payload control threads have been joined
[2025-10-13 08:30:37] 2025-10-13 12:29:46,553 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:30:37] 2025-10-13 12:29:46,631 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:30:37] 2025-10-13 12:29:46,631 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:30:37] 2025-10-13 12:29:46,653 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:30:37] 2025-10-13 12:29:46,738 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:30:37] 2025-10-13 12:29:46,746 | INFO     | [data] control thread has finished
[2025-10-13 08:30:37] 2025-10-13 12:29:46,890 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:30:37] 2025-10-13 12:29:46,929 | INFO     | [job] validate thread has finished
[2025-10-13 08:30:37] 2025-10-13 12:29:47,149 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:30:37] 2025-10-13 12:29:47,256 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:30:37] 2025-10-13 12:29:47,296 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:30:37] 2025-10-13 12:29:47,497 | INFO     | [job] control thread has finished
[2025-10-13 08:30:37] 2025-10-13 12:29:47,530 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:30:37] 2025-10-13 12:29:47,546 | INFO     | [payload] control thread has finished
[2025-10-13 08:30:37] 2025-10-13 12:29:47,689 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:30:37] 2025-10-13 12:29:47,905 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:30:37] 2025-10-13 12:29:48,558 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:30:37] 2025-10-13 12:29:50,896 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:30:37] 2025-10-13 12:30:15,292 | INFO     | PID=26435 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 08:30:37] 2025-10-13 12:30:15,292 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:30:37] 2025-10-13 12:30:15,292 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:30:37] 2025-10-13 12:30:15,292 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:30:37] 2025-10-13 12:30:31,112 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:30:37] 2025-10-13 12:30:32,626 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139979936794432)>', '<ExcThread(monitor, started 139978680035072)>']
[2025-10-13 08:30:37] 2025-10-13 12:30:33,384 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:30:37] 2025-10-13 12:30:33,385 | INFO     | [monitor] control thread has ended
[2025-10-13 08:30:37] 2025-10-13 12:30:37,651 | INFO     | all workflow threads have been joined
[2025-10-13 08:30:37] 2025-10-13 12:30:37,669 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:30:37] 2025-10-13 12:30:37,670 | INFO     | traces error code: 0
[2025-10-13 08:30:37] 2025-10-13 12:30:37,670 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:30:37] 2025-10-13 12:30:37,760 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:30:37] 2025-10-13 12:30:37,764 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:30:37] 2025-10-13 12:30:37,768 [wrapper] pilotpid: 26435
[2025-10-13 08:30:37] 2025-10-13 12:30:37,772 [wrapper] Pilot exit status: 0
[2025-10-13 08:30:37] 2025-10-13 12:30:37,788 [wrapper] pandaids: 6837401817
[2025-10-13 08:30:37] 2025-10-13 12:30:37,833 [wrapper] cleanup supervisor_pilot 28039 26436
[2025-10-13 08:30:37] 2025-10-13 12:30:37,836 [wrapper] Test setup, not cleaning
[2025-10-13 08:30:37] 2025-10-13 12:30:37,840 [wrapper] apfmon messages muted
[2025-10-13 08:30:37] 2025-10-13 12:30:37,844 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:30:37] 2025-10-13 12:30:37,848 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:30:37]  *** Error codes and diagnostics ***
[2025-10-13 08:30:37]     "exeErrorCode": 0,
[2025-10-13 08:30:37]     "exeErrorDiag": "",
[2025-10-13 08:30:37]     "pilotErrorCode": 0,
[2025-10-13 08:30:37]     "pilotErrorDiag": "",
[2025-10-13 08:30:37]  *** Listing of results directory ***
[2025-10-13 08:30:37] total 408364
[2025-10-13 08:30:37] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 00:08 pilot3.tar.gz
[2025-10-13 08:30:37] -rw-r--r-- 1 boincer umatlas      5112 Oct 10 00:16 queuedata.json
[2025-10-13 08:30:37] -rwx------ 1 boincer umatlas     36292 Oct 10 00:16 runpilot2-wrapper.sh
[2025-10-13 08:30:37] -rw-r--r-- 1 boincer umatlas       100 Oct 13 07:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:30:37] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 07:14 run_atlas
[2025-10-13 08:30:37] -rw-r--r-- 1 boincer umatlas       105 Oct 13 07:14 job.xml
[2025-10-13 08:30:37] -rw-r--r-- 2 boincer umatlas 219475066 Oct 13 07:14 EVNT.46676267._001322.pool.root.1
[2025-10-13 08:30:37] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 07:14 start_atlas.sh
[2025-10-13 08:30:37] drwxrwx--x 2 boincer umatlas      4096 Oct 13 07:14 shared
[2025-10-13 08:30:37] -rw-r--r-- 2 boincer umatlas    569680 Oct 13 07:14 input.tar.gz
[2025-10-13 08:30:37] -rw-r--r-- 1 boincer umatlas         0 Oct 13 07:14 boinc_lockfile
[2025-10-13 08:30:37] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 07:14 pandaJob.out
[2025-10-13 08:30:37] -rw------- 1 boincer umatlas    972497 Oct 13 07:14 agis_schedconf.cvmfs.json
[2025-10-13 08:30:37] -rw------- 1 boincer umatlas   1560580 Oct 13 07:14 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:30:37] drwx------ 5 boincer umatlas      4096 Oct 13 07:14 pilot3
[2025-10-13 08:30:37] -rw-r--r-- 1 boincer umatlas      5952 Oct 13 08:28 init_data.xml
[2025-10-13 08:30:37] -rw------- 1 boincer umatlas 192733888 Oct 13 08:29 HITS.46676269._032446.pool.root.1
[2025-10-13 08:30:37] -rw-r--r-- 1 boincer umatlas       530 Oct 13 08:29 boinc_task_state.xml
[2025-10-13 08:30:37] -rw------- 1 boincer umatlas        95 Oct 13 08:29 pilot_heartbeat.json
[2025-10-13 08:30:37] -rw------- 1 boincer umatlas      1046 Oct 13 08:29 memory_monitor_summary.json
[2025-10-13 08:30:37] -rw------- 1 boincer umatlas    374333 Oct 13 08:29 log.46676269._032446.job.log.tgz.1
[2025-10-13 08:30:37] -rw------- 1 boincer umatlas      7851 Oct 13 08:29 heartbeat.json
[2025-10-13 08:30:37] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 08:30 boinc_mmap_file
[2025-10-13 08:30:37] -rw-r--r-- 1 boincer umatlas        27 Oct 13 08:30 wrapper_checkpoint.txt
[2025-10-13 08:30:37] -rw------- 1 boincer umatlas      4746 Oct 13 08:30 pilotlog.txt
[2025-10-13 08:30:37] -rw------- 1 boincer umatlas    652521 Oct 13 08:30 log.46676269._032446.job.log.1
[2025-10-13 08:30:37] -rw------- 1 boincer umatlas       357 Oct 13 08:30 output.list
[2025-10-13 08:30:37] -rw-r--r-- 1 boincer umatlas       620 Oct 13 08:30 runtime_log
[2025-10-13 08:30:37] -rw------- 1 boincer umatlas   1044480 Oct 13 08:30 result.tar.gz
[2025-10-13 08:30:37] -rw-r--r-- 1 boincer umatlas      8700 Oct 13 08:30 runtime_log.err
[2025-10-13 08:30:37] -rw------- 1 boincer umatlas       659 Oct 13 08:30 R0ZKDmfjJR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6KcNDmrX0Qlm.diag
[2025-10-13 08:30:37] -rw-r--r-- 1 boincer umatlas     22184 Oct 13 08:30 stderr.txt
[2025-10-13 08:30:37] HITS file was successfully produced:
[2025-10-13 08:30:37] -rw------- 1 boincer umatlas 192733888 Oct 13 08:29 shared/HITS.pool.root.1
[2025-10-13 08:30:37]  *** Contents of shared directory: ***
[2025-10-13 08:30:37] total 404156
[2025-10-13 08:30:37] -rw-r--r-- 2 boincer umatlas 219475066 Oct 13 07:14 ATLAS.root_0
[2025-10-13 08:30:37] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 07:14 start_atlas.sh
[2025-10-13 08:30:37] -rw-r--r-- 2 boincer umatlas    569680 Oct 13 07:14 input.tar.gz
[2025-10-13 08:30:37] -rw------- 1 boincer umatlas 192733888 Oct 13 08:29 HITS.pool.root.1
[2025-10-13 08:30:37] -rw------- 1 boincer umatlas   1044480 Oct 13 08:30 result.tar.gz
08:30:39 (22395): run_atlas exited; CPU time 46193.411133
08:30:39 (22395): called boinc_finish(0)

</stderr_txt>
]]>

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