Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:00:27 (222097): wrapper (7.7.26015): starting
07:00:27 (222097): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 07:00:27] Arguments: --nthreads 9
[2025-10-13 07:00:27] Threads: 9
[2025-10-13 07:00:27] Checking for CVMFS
[2025-10-13 07:00:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:00:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:00:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:00:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:00:28] 2.13.2.0 3951459 78751 559128 151658 2 609 20682669 32935936 38912 16776704 0 584801390 99.692 470186178 15011 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 07:00:28] CVMFS is ok
[2025-10-13 07:00:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:00:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 07:00:28] Further information can be found at the LHC@home message board.
[2025-10-13 07:00:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:00:28] Checking for apptainer binary...
[2025-10-13 07:00:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:00:28] Running /usr/bin/apptainer --version
[2025-10-13 07:00:28] apptainer version 1.4.3-1.el9
[2025-10-13 07:00:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:00:28] c7-6-31.aglt2.org
[2025-10-13 07:00:28] apptainer works
[2025-10-13 07:00:28] Set ATHENA_PROC_NUMBER=9
[2025-10-13 07:00:28] Set ATHENA_CORE_NUMBER=9
[2025-10-13 07:00:28] Starting ATLAS job with PandaID=6842613626
[2025-10-13 07:00:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:17:09]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:17:09] ]
[2025-10-13 08:17:09] 2025-10-13 12:16:12,730 | INFO     | transferring file log.46676269._096367.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6842613626/log.46676269._096367.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 08:17:09] 2025-10-13 12:16:12,730 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6842613626/log.46676269._096367.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._096367.job
[2025-10-13 08:17:09] 2025-10-13 12:16:12,762 | INFO     | adding to output.list: log.46676269._096367.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/2a/log.46676269._096367.job.log.tg
[2025-10-13 08:17:09] 2025-10-13 12:16:12,763 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 08:17:09] 2025-10-13 12:16:12,763 | INFO     | summary of transferred files:
[2025-10-13 08:17:09] 2025-10-13 12:16:12,763 | INFO     |  -- lfn=log.46676269._096367.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 08:17:09] 2025-10-13 12:16:12,763 | INFO     | stage-out finished correctly
[2025-10-13 08:17:09] 2025-10-13 12:16:12,857 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 08:17:09] 2025-10-13 12:16:12,963 | INFO     | time since job start (4518s) is within the limit (172800.0s)
[2025-10-13 08:17:09] 2025-10-13 12:16:13,098 | INFO     | number of running child processes to parent process 236547: 1
[2025-10-13 08:17:09] 2025-10-13 12:16:13,098 | INFO     | maximum number of monitored processes: 6
[2025-10-13 08:17:09] 2025-10-13 12:16:14,318 | INFO     | job 6842613626 has state=finished
[2025-10-13 08:17:09] 2025-10-13 12:16:14,319 | INFO     | preparing for final server update for job 6842613626 in state='finished'
[2025-10-13 08:17:09] 2025-10-13 12:16:14,319 | INFO     | this job has now completed (state=finished)
[2025-10-13 08:17:09] 2025-10-13 12:16:14,319 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 08:17:09] 2025-10-13 12:16:14,319 | INFO     | log transfer has been attempted: DONE
[2025-10-13 08:17:09] 2025-10-13 12:16:14,320 | INFO     | job 6842613626 has finished - writing final server update
[2025-10-13 08:17:09] 2025-10-13 12:16:14,321 | INFO     | total number of processed events: 400 (read)
[2025-10-13 08:17:09] 2025-10-13 12:16:14,321 | INFO     | executing command: lscpu
[2025-10-13 08:17:09] 2025-10-13 12:16:14,398 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 08:17:09] 2025-10-13 12:16:14,969 | INFO     | time since job start (4520s) is within the limit (172800.0s)
[2025-10-13 08:17:09] 2025-10-13 12:16:15,604 | INFO     | monitor loop #318: job 0:6842613626 is in state 'finished'
[2025-10-13 08:17:09] 2025-10-13 12:16:15,604 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:17:09] 2025-10-13 12:16:16,975 | INFO     | time since job start (4522s) is within the limit (172800.0s)
[2025-10-13 08:17:09] 2025-10-13 12:16:18,110 | INFO     | monitor loop #319: job 0:6842613626 is in state 'finished'
[2025-10-13 08:17:09] 2025-10-13 12:16:18,111 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:17:09] 2025-10-13 12:16:18,981 | INFO     | time since job start (4524s) is within the limit (172800.0s)
[2025-10-13 08:17:09] 2025-10-13 12:16:20,635 | INFO     | monitor loop #320: job 0:6842613626 is in state 'finished'
[2025-10-13 08:17:09] 2025-10-13 12:16:20,636 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:17:09] 2025-10-13 12:16:20,989 | INFO     | time since job start (4526s) is within the limit (172800.0s)
[2025-10-13 08:17:09] 2025-10-13 12:16:20,989 | INFO     | 4531s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 08:17:09] 2025-10-13 12:16:22,998 | INFO     | time since job start (4528s) is within the limit (172800.0s)
[2025-10-13 08:17:09] 2025-10-13 12:16:23,144 | INFO     | monitor loop #321: job 0:6842613626 is in state 'finished'
[2025-10-13 08:17:09] 2025-10-13 12:16:23,145 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:17:09] 2025-10-13 12:16:24,013 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 08:17:09] 2025-10-13 12:16:24,069 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3364.6282604166663
[2025-10-13 08:17:09] 2025-10-13 12:16:24,131 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6842613626/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 08:17:09] 2025-10-13 12:16:24,131 | INFO     | extracted standard info from prmon json
[2025-10-13 08:17:09] 2025-10-13 12:16:24,131 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 08:17:09] 2025-10-13 12:16:24,132 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 08:17:09] 2025-10-13 12:16:24,132 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:17:09] 2025-10-13 12:16:24,132 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:17:09] 2025-10-13 12:16:24,133 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:17:09] 2025-10-13 12:16:24,133 | INFO     | sum of square deviations: 93240818.0
[2025-10-13 08:17:09] 2025-10-13 12:16:24,134 | INFO     | sum of deviations: -2354186664.0000005
[2025-10-13 08:17:09] 2025-10-13 12:16:24,134 | INFO     | mean x: 1760355620.0
[2025-10-13 08:17:09] 2025-10-13 12:16:24,134 | INFO     | mean y: 2279460.850746269
[2025-10-13 08:17:09] 2025-10-13 12:16:24,134 | INFO     | -- intersect: 44448540373.12044
[2025-10-13 08:17:09] 2025-10-13 12:16:24,134 | INFO     | intersect: 44448540373.12044
[2025-10-13 08:17:09] 2025-10-13 12:16:24,134 | INFO     | chi2: 0.08021896125438244
[2025-10-13 08:17:09] 2025-10-13 12:16:24,134 | INFO     | -- intersect: 44448540373.12044
[2025-10-13 08:17:09] 2025-10-13 12:16:24,134 | INFO     | current memory leak: -25.25 B/s (using 67 data points, chi2=0.08)
[2025-10-13 08:17:09] 2025-10-13 12:16:24,135 | INFO     | could have reported an average CPU frequency of 3380 MHz (6 samples)
[2025-10-13 08:17:09] 2025-10-13 12:16:24,135 | INFO     | ..............................
[2025-10-13 08:17:09] 2025-10-13 12:16:24,135 | INFO     | . Timing measurements:
[2025-10-13 08:17:09] 2025-10-13 12:16:24,135 | INFO     | . get job = 0 s
[2025-10-13 08:17:09] 2025-10-13 12:16:24,135 | INFO     | . initial setup = 4 s
[2025-10-13 08:17:09] 2025-10-13 12:16:24,135 | INFO     | . payload setup = 13 s
[2025-10-13 08:17:09] 2025-10-13 12:16:24,135 | INFO     | . stage-in = 0 s
[2025-10-13 08:17:09] 2025-10-13 12:16:24,135 | INFO     | . payload execution = 4476 s
[2025-10-13 08:17:09] 2025-10-13 12:16:24,135 | INFO     | . stage-out = 1 s
[2025-10-13 08:17:09] 2025-10-13 12:16:24,135 | INFO     | . log creation = 0 s
[2025-10-13 08:17:09] 2025-10-13 12:16:24,135 | INFO     | ..............................
[2025-10-13 08:17:09] 2025-10-13 12:16:24,246 | INFO     | 
[2025-10-13 08:17:09] 2025-10-13 12:16:24,249 | INFO     | job summary report
[2025-10-13 08:17:09] 2025-10-13 12:16:24,249 | INFO     | --------------------------------------------------
[2025-10-13 08:17:09] 2025-10-13 12:16:24,249 | INFO     | PanDA job id: 6842613626
[2025-10-13 08:17:09] 2025-10-13 12:16:24,249 | INFO     | task id: 46676269
[2025-10-13 08:17:09] 2025-10-13 12:16:24,249 | INFO     | errors: (none)
[2025-10-13 08:17:09] 2025-10-13 12:16:24,249 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:17:09] 2025-10-13 12:16:24,249 | INFO     | pilot state: finished 
[2025-10-13 08:17:09] 2025-10-13 12:16:24,250 | INFO     | transexitcode: 0
[2025-10-13 08:17:09] 2025-10-13 12:16:24,250 | INFO     | exeerrorcode: 0
[2025-10-13 08:17:09] 2025-10-13 12:16:24,250 | INFO     | exeerrordiag: 
[2025-10-13 08:17:09] 2025-10-13 12:16:24,250 | INFO     | exitcode: 0
[2025-10-13 08:17:09] 2025-10-13 12:16:24,250 | INFO     | exitmsg: OK
[2025-10-13 08:17:09] 2025-10-13 12:16:24,250 | INFO     | cpuconsumptiontime: 29305 s
[2025-10-13 08:17:09] 2025-10-13 12:16:24,250 | INFO     | nevents: 400
[2025-10-13 08:17:09] 2025-10-13 12:16:24,250 | INFO     | neventsw: 0
[2025-10-13 08:17:09] 2025-10-13 12:16:24,250 | INFO     | pid: 236547
[2025-10-13 08:17:09] 2025-10-13 12:16:24,250 | INFO     | pgrp: 236547
[2025-10-13 08:17:09] 2025-10-13 12:16:24,250 | INFO     | corecount: 9
[2025-10-13 08:17:09] 2025-10-13 12:16:24,251 | INFO     | event service: False
[2025-10-13 08:17:09] 2025-10-13 12:16:24,251 | INFO     | sizes: {0: 2348806, 9: 2349068, 11: 2349096, 4494: 2375350, 4496: 2384404, 4507: 2384542}
[2025-10-13 08:17:09] 2025-10-13 12:16:24,251 | INFO     | --------------------------------------------------
[2025-10-13 08:17:09] 2025-10-13 12:16:24,251 | INFO     | 
[2025-10-13 08:17:09] 2025-10-13 12:16:24,251 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 08:17:09] 2025-10-13 12:16:24,265 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:17:09] 2025-10-13 12:16:24,265 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:17:09] 2025-10-13 12:16:24,265 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:17:09] 2025-10-13 12:16:24,266 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:17:09] 2025-10-13 12:16:24,266 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:17:09] 2025-10-13 12:16:24,266 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:17:09] 2025-10-13 12:16:24,266 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:17:09] 2025-10-13 12:16:24,266 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:17:09] 2025-10-13 12:16:24,266 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:17:09] 2025-10-13 12:16:24,266 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:17:09] 2025-10-13 12:16:24,266 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:17:09] 2025-10-13 12:16:24,266 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:17:09] 2025-10-13 12:16:24,266 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:17:09] 2025-10-13 12:16:24,266 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:17:09] 2025-10-13 12:16:24,266 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:17:09] 2025-10-13 12:16:24,266 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:17:09] 2025-10-13 12:16:24,267 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:17:09] 2025-10-13 12:16:24,267 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:17:09] 2025-10-13 12:16:24,267 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:17:09] 2025-10-13 12:16:24,267 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:17:09] 2025-10-13 12:16:24,267 | INFO     | job 6842613626 has completed (purged errors)
[2025-10-13 08:17:09] 2025-10-13 12:16:24,267 | INFO     | overall cleanup function is called
[2025-10-13 08:17:09] 2025-10-13 12:16:25,275 | INFO     | --- collectZombieJob: --- 10, [236547]
[2025-10-13 08:17:09] 2025-10-13 12:16:25,276 | INFO     | zombie collector waiting for pid 236547
[2025-10-13 08:17:09] 2025-10-13 12:16:25,276 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:17:09] 2025-10-13 12:16:25,276 | INFO     | collected zombie processes
[2025-10-13 08:17:09] 2025-10-13 12:16:25,276 | INFO     | will attempt to kill all subprocesses of pid=236547
[2025-10-13 08:17:09] 2025-10-13 12:16:26,081 | INFO     | process IDs to be killed: [236547] (in reverse order)
[2025-10-13 08:17:09] 2025-10-13 12:16:26,531 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:17:09] 2025-10-13 12:16:26,531 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:17:09] 2025-10-13 12:16:26,553 | INFO     | did not find any defunct processes belonging to 236547
[2025-10-13 08:17:09] 2025-10-13 12:16:26,575 | INFO     | did not find any defunct processes belonging to 236547
[2025-10-13 08:17:09] 2025-10-13 12:16:26,576 | INFO     | ready for new job
[2025-10-13 08:17:09] 2025-10-13 12:16:26,576 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:17:09] 2025-10-13 12:16:26,577 | INFO     | ***************************************
[2025-10-13 08:17:09] 2025-10-13 12:16:26,577 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:17:09] 2025-10-13 12:16:26,577 | INFO     | ***************************************
[2025-10-13 08:17:09] 2025-10-13 12:16:26,577 | INFO     | 
[2025-10-13 08:17:09] 2025-10-13 12:16:26,585 | INFO     | architecture information:
[2025-10-13 08:17:09] 2025-10-13 12:16:26,585 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:17:09] 2025-10-13 12:16:26,620 | INFO     | cat /etc/os-release:
[2025-10-13 08:17:09] NAME="CentOS Linux"
[2025-10-13 08:17:09] VERSION="7 (Core)"
[2025-10-13 08:17:09] ID="centos"
[2025-10-13 08:17:09] ID_LIKE="rhel fedora"
[2025-10-13 08:17:09] VERSION_ID="7"
[2025-10-13 08:17:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:17:09] ANSI_COLOR="0;31"
[2025-10-13 08:17:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:17:09] HOME_URL="https://www.centos.org/"
[2025-10-13 08:17:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:17:09] 
[2025-10-13 08:17:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:17:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:17:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:17:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:17:09] 
[2025-10-13 08:17:09] 2025-10-13 12:16:26,620 | INFO     | ***************************************
[2025-10-13 08:17:09] 2025-10-13 12:16:27,124 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 08:17:09] 2025-10-13 12:16:27,145 | INFO     | sufficient remaining disk space (75677827072 B)
[2025-10-13 08:17:09] 2025-10-13 12:16:27,145 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:17:09] 2025-10-13 12:16:27,145 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:17:09] 2025-10-13 12:16:27,145 | INFO     | update_server=False
[2025-10-13 08:17:09] 2025-10-13 12:16:27,145 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:17:09] 2025-10-13 12:16:27,145 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:17:09] 2025-10-13 12:16:27,146 | INFO     | aborting loop
[2025-10-13 08:17:09] 2025-10-13 12:16:27,197 | INFO     | all payload control threads have been joined
[2025-10-13 08:17:09] 2025-10-13 12:16:27,788 | INFO     | all data control threads have been joined
[2025-10-13 08:17:09] 2025-10-13 12:16:27,968 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:17:09] 2025-10-13 12:16:28,152 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:17:09] 2025-10-13 12:16:28,152 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:17:09] 2025-10-13 12:16:28,204 | INFO     | [payload] control thread has finished
[2025-10-13 08:17:09] 2025-10-13 12:16:28,226 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:17:09] 2025-10-13 12:16:28,242 | INFO     | all job control threads have been joined
[2025-10-13 08:17:09] 2025-10-13 12:16:28,407 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:17:09] 2025-10-13 12:16:28,457 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:17:09] 2025-10-13 12:16:28,481 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:17:09] 2025-10-13 12:16:28,772 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:17:09] 2025-10-13 12:16:28,795 | INFO     | [data] control thread has finished
[2025-10-13 08:17:09] 2025-10-13 12:16:28,924 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:17:09] 2025-10-13 12:16:28,969 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:17:09] 2025-10-13 12:16:29,248 | INFO     | [job] control thread has finished
[2025-10-13 08:17:09] 2025-10-13 12:16:29,268 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:17:09] 2025-10-13 12:16:29,325 | INFO     | [job] validate thread has finished
[2025-10-13 08:17:09] 2025-10-13 12:16:30,274 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:17:09] 2025-10-13 12:16:30,415 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:17:09] 2025-10-13 12:16:31,996 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:17:09] 2025-10-13 12:16:37,795 | INFO     | job.realtimelogging is not enabled
[2025-10-13 08:17:09] 2025-10-13 12:16:38,801 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:17:09] 2025-10-13 12:16:57,123 | INFO     | PID=228276 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 08:17:09] 2025-10-13 12:16:57,123 | INFO     | .. there are 54 such processes running
[2025-10-13 08:17:09] 2025-10-13 12:16:57,123 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:17:09] 2025-10-13 12:16:57,123 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:17:09] 2025-10-13 12:16:57,123 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:17:09] 2025-10-13 12:17:01,842 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:17:09] 2025-10-13 12:17:03,609 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140081737185088)>', '<ExcThread(monitor, started 140080861656832)>']
[2025-10-13 08:17:09] 2025-10-13 12:17:04,165 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:17:09] 2025-10-13 12:17:04,165 | INFO     | [monitor] control thread has ended
[2025-10-13 08:17:09] 2025-10-13 12:17:08,635 | INFO     | all workflow threads have been joined
[2025-10-13 08:17:09] 2025-10-13 12:17:08,635 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:17:09] 2025-10-13 12:17:08,635 | INFO     | traces error code: 0
[2025-10-13 08:17:09] 2025-10-13 12:17:08,635 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:17:09] 2025-10-13 12:17:08,765 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:17:09] 2025-10-13 12:17:08,769 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:17:09] 2025-10-13 12:17:08,771 [wrapper] pilotpid: 228276
[2025-10-13 08:17:09] 2025-10-13 12:17:08,773 [wrapper] Pilot exit status: 0
[2025-10-13 08:17:09] 2025-10-13 12:17:08,785 [wrapper] pandaids: 6842613626
[2025-10-13 08:17:09] 2025-10-13 12:17:08,917 [wrapper] cleanup supervisor_pilot  859019 228277
[2025-10-13 08:17:09] 2025-10-13 12:17:08,944 [wrapper] Test setup, not cleaning
[2025-10-13 08:17:09] 2025-10-13 12:17:08,948 [wrapper] apfmon messages muted
[2025-10-13 08:17:09] 2025-10-13 12:17:08,978 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:17:09] 2025-10-13 12:17:08,982 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:17:09]  *** Error codes and diagnostics ***
[2025-10-13 08:17:09]     "exeErrorCode": 0,
[2025-10-13 08:17:09]     "exeErrorDiag": "",
[2025-10-13 08:17:09]     "pilotErrorCode": 0,
[2025-10-13 08:17:09]     "pilotErrorDiag": "",
[2025-10-13 08:17:09]  *** Listing of results directory ***
[2025-10-13 08:17:09] total 410424
[2025-10-13 08:17:09] -rw-r--r--. 1 boincer umatlas    557409 Oct 13 01:28 pilot3.tar.gz
[2025-10-13 08:17:09] -rwx------. 1 boincer umatlas     36292 Oct 13 01:52 runpilot2-wrapper.sh
[2025-10-13 08:17:09] -rw-r--r--. 1 boincer umatlas      5112 Oct 13 01:52 queuedata.json
[2025-10-13 08:17:09] -rw-r--r--. 1 boincer umatlas       100 Oct 13 07:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:17:09] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 07:00 run_atlas
[2025-10-13 08:17:09] -rw-r--r--. 1 boincer umatlas       105 Oct 13 07:00 job.xml
[2025-10-13 08:17:09] -rw-r--r--. 2 boincer umatlas 219463065 Oct 13 07:00 EVNT.46676267._004186.pool.root.1
[2025-10-13 08:17:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 07:00 start_atlas.sh
[2025-10-13 08:17:09] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 07:00 shared
[2025-10-13 08:17:09] -rw-r--r--. 2 boincer umatlas    569683 Oct 13 07:00 input.tar.gz
[2025-10-13 08:17:09] -rw-r--r--. 1 boincer umatlas         0 Oct 13 07:00 boinc_lockfile
[2025-10-13 08:17:09] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 07:00 pandaJob.out
[2025-10-13 08:17:09] -rw-------. 1 boincer umatlas    972497 Oct 13 07:00 agis_schedconf.cvmfs.json
[2025-10-13 08:17:09] -rw-------. 1 boincer umatlas   1560580 Oct 13 07:00 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:17:09] drwx------. 5 boincer umatlas      4096 Oct 13 07:00 pilot3
[2025-10-13 08:17:09] -rw-r--r--. 1 boincer umatlas      6932 Oct 13 08:13 init_data.xml
[2025-10-13 08:17:09] -rw-------. 1 boincer umatlas 194963151 Oct 13 08:15 HITS.46676269._096367.pool.root.1
[2025-10-13 08:17:09] -rw-r--r--. 1 boincer umatlas       529 Oct 13 08:15 boinc_task_state.xml
[2025-10-13 08:17:09] -rw-------. 1 boincer umatlas        95 Oct 13 08:16 pilot_heartbeat.json
[2025-10-13 08:17:09] -rw-------. 1 boincer umatlas      1041 Oct 13 08:16 memory_monitor_summary.json
[2025-10-13 08:17:09] -rw-------. 1 boincer umatlas    331223 Oct 13 08:16 log.46676269._096367.job.log.tgz.1
[2025-10-13 08:17:09] -rw-------. 1 boincer umatlas      7780 Oct 13 08:16 heartbeat.json
[2025-10-13 08:17:09] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 08:17 boinc_mmap_file
[2025-10-13 08:17:09] -rw-r--r--. 1 boincer umatlas        27 Oct 13 08:17 wrapper_checkpoint.txt
[2025-10-13 08:17:09] -rw-------. 1 boincer umatlas      4895 Oct 13 08:17 pilotlog.txt
[2025-10-13 08:17:09] -rw-------. 1 boincer umatlas    654440 Oct 13 08:17 log.46676269._096367.job.log.1
[2025-10-13 08:17:09] -rw-------. 1 boincer umatlas       357 Oct 13 08:17 output.list
[2025-10-13 08:17:09] -rw-r--r--. 1 boincer umatlas       620 Oct 13 08:17 runtime_log
[2025-10-13 08:17:09] -rw-------. 1 boincer umatlas   1003520 Oct 13 08:17 result.tar.gz
[2025-10-13 08:17:09] -rw-r--r--. 1 boincer umatlas      8698 Oct 13 08:17 runtime_log.err
[2025-10-13 08:17:09] -rw-------. 1 boincer umatlas       655 Oct 13 08:17 HTqMDmueQS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmmhVMDmUvxJYm.diag
[2025-10-13 08:17:09] -rw-r--r--. 1 boincer umatlas      2143 Oct 13 08:17 stderr.txt
[2025-10-13 08:17:09] HITS file was successfully produced:
[2025-10-13 08:17:09] -rw-------. 1 boincer umatlas 194963151 Oct 13 08:15 shared/HITS.pool.root.1
[2025-10-13 08:17:09]  *** Contents of shared directory: ***
[2025-10-13 08:17:09] total 406280
[2025-10-13 08:17:09] -rw-r--r--. 2 boincer umatlas 219463065 Oct 13 07:00 ATLAS.root_0
[2025-10-13 08:17:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 07:00 start_atlas.sh
[2025-10-13 08:17:09] -rw-r--r--. 2 boincer umatlas    569683 Oct 13 07:00 input.tar.gz
[2025-10-13 08:17:09] -rw-------. 1 boincer umatlas 194963151 Oct 13 08:15 HITS.pool.root.1
[2025-10-13 08:17:09] -rw-------. 1 boincer umatlas   1003520 Oct 13 08:17 result.tar.gz
08:17:11 (222097): run_atlas exited; CPU time 29469.690402
08:17:11 (222097): called boinc_finish(0)

</stderr_txt>
]]>

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