Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:49:29 (27872): wrapper (7.7.26015): starting
06:49:29 (27872): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 06:49:29] Arguments: --nthreads 12
[2025-10-13 06:49:29] Threads: 12
[2025-10-13 06:49:29] Checking for CVMFS
[2025-10-13 06:49:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:49:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:49:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:49:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:49:29] 2.11.2.0 2924 224177 103772 151658 1 59 16614820 20275201 1 130560 4 111394817 99.984 13841358 12987 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 06:49:29] CVMFS is ok
[2025-10-13 06:49:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:49:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:49:29] Further information can be found at the LHC@home message board.
[2025-10-13 06:49:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:49:29] Checking for apptainer binary...
[2025-10-13 06:49:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:49:29] Running /usr/bin/apptainer --version
[2025-10-13 06:49:29] apptainer version 1.3.2-1.el7
[2025-10-13 06:49:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:49:31] c-205-28.aglt2.org
[2025-10-13 06:49:31] apptainer works
[2025-10-13 06:49:31] Set ATHENA_PROC_NUMBER=12
[2025-10-13 06:49:31] Set ATHENA_CORE_NUMBER=12
[2025-10-13 06:49:31] Starting ATLAS job with PandaID=6842633796
[2025-10-13 06:49:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:54:59]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:54:59]  protocol_id=None
[2025-10-13 07:54:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 07:54:59]  replicas=None
[2025-10-13 07:54:59]  scope=mc23_13p6TeV
[2025-10-13 07:54:59]  status=None
[2025-10-13 07:54:59]  status_code=0
[2025-10-13 07:54:59]  storage_token=
[2025-10-13 07:54:59]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6842633796/log.46376905._136458.job.log.tgz.1
[2025-10-13 07:54:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/b2/log.46376905._136458.job.log.tgz.1
[2025-10-13 07:54:59]  workdir=None
[2025-10-13 07:54:59] ]
[2025-10-13 07:54:59] 2025-10-13 11:54:27,098 | INFO     | transferring file log.46376905._136458.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6842633796/log.46376905._136458.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 07:54:59] 2025-10-13 11:54:27,098 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6842633796/log.46376905._136458.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._136458.job
[2025-10-13 07:54:59] 2025-10-13 11:54:27,120 | INFO     | adding to output.list: log.46376905._136458.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/b2/log.46376905._136458.job.log.tg
[2025-10-13 07:54:59] 2025-10-13 11:54:27,121 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 07:54:59] 2025-10-13 11:54:27,121 | INFO     | summary of transferred files:
[2025-10-13 07:54:59] 2025-10-13 11:54:27,121 | INFO     |  -- lfn=log.46376905._136458.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 07:54:59] 2025-10-13 11:54:27,122 | INFO     | stage-out finished correctly
[2025-10-13 07:54:59] 2025-10-13 11:54:27,909 | INFO     | PID=31615 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 07:54:59] 2025-10-13 11:54:27,996 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 07:54:59] 2025-10-13 11:54:28,240 | INFO     | job 6842633796 has state=finished
[2025-10-13 07:54:59] 2025-10-13 11:54:28,240 | INFO     | preparing for final server update for job 6842633796 in state='finished'
[2025-10-13 07:54:59] 2025-10-13 11:54:28,241 | INFO     | this job has now completed (state=finished)
[2025-10-13 07:54:59] 2025-10-13 11:54:28,241 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 07:54:59] 2025-10-13 11:54:28,241 | INFO     | log transfer has been attempted: DONE
[2025-10-13 07:54:59] 2025-10-13 11:54:28,241 | INFO     | job 6842633796 has finished - writing final server update
[2025-10-13 07:54:59] 2025-10-13 11:54:28,242 | INFO     | total number of processed events: 400 (read)
[2025-10-13 07:54:59] 2025-10-13 11:54:28,242 | INFO     | executing command: lscpu
[2025-10-13 07:54:59] 2025-10-13 11:54:28,266 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 07:54:59] 2025-10-13 11:54:28,910 | INFO     | time since job start (3881s) is within the limit (172800.0s)
[2025-10-13 07:54:59] 2025-10-13 11:54:30,916 | INFO     | time since job start (3883s) is within the limit (172800.0s)
[2025-10-13 07:54:59] 2025-10-13 11:54:30,962 | WARNING  | process 7655 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 07:54:59] 2025-10-13 11:54:30,962 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6842633796/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:54:59] 2025-10-13 11:54:31,064 | INFO     | number of running child processes to parent process 7655: 1
[2025-10-13 07:54:59] 2025-10-13 11:54:31,064 | INFO     | maximum number of monitored processes: 6
[2025-10-13 07:54:59] 2025-10-13 11:54:32,921 | INFO     | time since job start (3885s) is within the limit (172800.0s)
[2025-10-13 07:54:59] 2025-10-13 11:54:32,927 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 07:54:59] 2025-10-13 11:54:32,931 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-13 07:54:59] 2025-10-13 11:54:32,933 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6842633796/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:54:59] 2025-10-13 11:54:32,934 | INFO     | extracted standard info from prmon json
[2025-10-13 07:54:59] 2025-10-13 11:54:32,934 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:54:59] 2025-10-13 11:54:32,934 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:54:59] 2025-10-13 11:54:32,935 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:54:59] 2025-10-13 11:54:32,935 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:54:59] 2025-10-13 11:54:32,936 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:54:59] 2025-10-13 11:54:32,936 | INFO     | sum of square deviations: 57407588.0
[2025-10-13 07:54:59] 2025-10-13 11:54:32,937 | INFO     | sum of deviations: -4903399844.000001
[2025-10-13 07:54:59] 2025-10-13 11:54:32,937 | INFO     | mean x: 1760354629.0
[2025-10-13 07:54:59] 2025-10-13 11:54:32,937 | INFO     | mean y: 2738539.6315789474
[2025-10-13 07:54:59] 2025-10-13 11:54:32,937 | INFO     | -- intersect: 150361304609.73508
[2025-10-13 07:54:59] 2025-10-13 11:54:32,937 | INFO     | intersect: 150361304609.73508
[2025-10-13 07:54:59] 2025-10-13 11:54:32,937 | INFO     | chi2: 0.04916316034713875
[2025-10-13 07:54:59] 2025-10-13 11:54:32,938 | INFO     | -- intersect: 150361304609.73508
[2025-10-13 07:54:59] 2025-10-13 11:54:32,938 | INFO     | current memory leak: -85.41 B/s (using 57 data points, chi2=0.05)
[2025-10-13 07:54:59] 2025-10-13 11:54:32,938 | INFO     | could have reported an average CPU frequency of 2032 MHz (6 samples)
[2025-10-13 07:54:59] 2025-10-13 11:54:32,938 | INFO     | ..............................
[2025-10-13 07:54:59] 2025-10-13 11:54:32,938 | INFO     | . Timing measurements:
[2025-10-13 07:54:59] 2025-10-13 11:54:32,938 | INFO     | . get job = 0 s
[2025-10-13 07:54:59] 2025-10-13 11:54:32,939 | INFO     | . initial setup = 2 s
[2025-10-13 07:54:59] 2025-10-13 11:54:32,939 | INFO     | . payload setup = 7 s
[2025-10-13 07:54:59] 2025-10-13 11:54:32,939 | INFO     | . stage-in = 0 s
[2025-10-13 07:54:59] 2025-10-13 11:54:32,939 | INFO     | . payload execution = 3852 s
[2025-10-13 07:54:59] 2025-10-13 11:54:32,939 | INFO     | . stage-out = 0 s
[2025-10-13 07:54:59] 2025-10-13 11:54:32,939 | INFO     | . log creation = 0 s
[2025-10-13 07:54:59] 2025-10-13 11:54:32,939 | INFO     | ..............................
[2025-10-13 07:54:59] 2025-10-13 11:54:33,025 | INFO     | 
[2025-10-13 07:54:59] 2025-10-13 11:54:33,025 | INFO     | job summary report
[2025-10-13 07:54:59] 2025-10-13 11:54:33,025 | INFO     | --------------------------------------------------
[2025-10-13 07:54:59] 2025-10-13 11:54:33,025 | INFO     | PanDA job id: 6842633796
[2025-10-13 07:54:59] 2025-10-13 11:54:33,025 | INFO     | task id: 46376905
[2025-10-13 07:54:59] 2025-10-13 11:54:33,025 | INFO     | errors: (none)
[2025-10-13 07:54:59] 2025-10-13 11:54:33,025 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:54:59] 2025-10-13 11:54:33,025 | INFO     | pilot state: finished 
[2025-10-13 07:54:59] 2025-10-13 11:54:33,026 | INFO     | transexitcode: 0
[2025-10-13 07:54:59] 2025-10-13 11:54:33,026 | INFO     | exeerrorcode: 0
[2025-10-13 07:54:59] 2025-10-13 11:54:33,026 | INFO     | exeerrordiag: 
[2025-10-13 07:54:59] 2025-10-13 11:54:33,026 | INFO     | exitcode: 0
[2025-10-13 07:54:59] 2025-10-13 11:54:33,026 | INFO     | exitmsg: OK
[2025-10-13 07:54:59] 2025-10-13 11:54:33,026 | INFO     | cpuconsumptiontime: 42440 s
[2025-10-13 07:54:59] 2025-10-13 11:54:33,026 | INFO     | nevents: 400
[2025-10-13 07:54:59] 2025-10-13 11:54:33,026 | INFO     | neventsw: 0
[2025-10-13 07:54:59] 2025-10-13 11:54:33,026 | INFO     | pid: 7655
[2025-10-13 07:54:59] 2025-10-13 11:54:33,026 | INFO     | pgrp: 7655
[2025-10-13 07:54:59] 2025-10-13 11:54:33,027 | INFO     | corecount: 12
[2025-10-13 07:54:59] 2025-10-13 11:54:33,027 | INFO     | event service: False
[2025-10-13 07:54:59] 2025-10-13 11:54:33,027 | INFO     | sizes: {0: 2348538, 1: 2348793, 6: 2349055, 12: 2349083, 3863: 2374862, 3864: 2383860, 3865: 2384044, 3870: 2384238}
[2025-10-13 07:54:59] 2025-10-13 11:54:33,027 | INFO     | --------------------------------------------------
[2025-10-13 07:54:59] 2025-10-13 11:54:33,027 | INFO     | 
[2025-10-13 07:54:59] 2025-10-13 11:54:33,027 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 07:54:59] 2025-10-13 11:54:33,051 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:54:59] 2025-10-13 11:54:33,051 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:54:59] 2025-10-13 11:54:33,052 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:54:59] 2025-10-13 11:54:33,052 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:54:59] 2025-10-13 11:54:33,052 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:54:59] 2025-10-13 11:54:33,052 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:54:59] 2025-10-13 11:54:33,052 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:54:59] 2025-10-13 11:54:33,052 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:54:59] 2025-10-13 11:54:33,053 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:54:59] 2025-10-13 11:54:33,053 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:54:59] 2025-10-13 11:54:33,053 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:54:59] 2025-10-13 11:54:33,053 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:54:59] 2025-10-13 11:54:33,053 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:54:59] 2025-10-13 11:54:33,054 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:54:59] 2025-10-13 11:54:33,054 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:54:59] 2025-10-13 11:54:33,054 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:54:59] 2025-10-13 11:54:33,054 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:54:59] 2025-10-13 11:54:33,054 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:54:59] 2025-10-13 11:54:33,054 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:54:59] 2025-10-13 11:54:33,054 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:54:59] 2025-10-13 11:54:33,055 | INFO     | job 6842633796 has completed (purged errors)
[2025-10-13 07:54:59] 2025-10-13 11:54:33,055 | INFO     | overall cleanup function is called
[2025-10-13 07:54:59] 2025-10-13 11:54:34,063 | INFO     | --- collectZombieJob: --- 10, [7655]
[2025-10-13 07:54:59] 2025-10-13 11:54:34,063 | INFO     | zombie collector waiting for pid 7655
[2025-10-13 07:54:59] 2025-10-13 11:54:34,063 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:54:59] 2025-10-13 11:54:34,063 | INFO     | collected zombie processes
[2025-10-13 07:54:59] 2025-10-13 11:54:34,063 | INFO     | will attempt to kill all subprocesses of pid=7655
[2025-10-13 07:54:59] 2025-10-13 11:54:34,156 | INFO     | process IDs to be killed: [7655] (in reverse order)
[2025-10-13 07:54:59] 2025-10-13 11:54:34,210 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:54:59] 2025-10-13 11:54:34,210 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:54:59] 2025-10-13 11:54:34,214 | INFO     | did not find any defunct processes belonging to 7655
[2025-10-13 07:54:59] 2025-10-13 11:54:34,216 | INFO     | did not find any defunct processes belonging to 7655
[2025-10-13 07:54:59] 2025-10-13 11:54:34,216 | INFO     | ready for new job
[2025-10-13 07:54:59] 2025-10-13 11:54:34,216 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:54:59] 2025-10-13 11:54:34,218 | INFO     | ***************************************
[2025-10-13 07:54:59] 2025-10-13 11:54:34,218 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:54:59] 2025-10-13 11:54:34,218 | INFO     | ***************************************
[2025-10-13 07:54:59] 2025-10-13 11:54:34,218 | INFO     | 
[2025-10-13 07:54:59] 2025-10-13 11:54:34,218 | INFO     | architecture information:
[2025-10-13 07:54:59] 2025-10-13 11:54:34,219 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:54:59] 2025-10-13 11:54:34,233 | INFO     | cat /etc/os-release:
[2025-10-13 07:54:59] NAME="CentOS Linux"
[2025-10-13 07:54:59] VERSION="7 (Core)"
[2025-10-13 07:54:59] ID="centos"
[2025-10-13 07:54:59] ID_LIKE="rhel fedora"
[2025-10-13 07:54:59] VERSION_ID="7"
[2025-10-13 07:54:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:54:59] ANSI_COLOR="0;31"
[2025-10-13 07:54:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:54:59] HOME_URL="https://www.centos.org/"
[2025-10-13 07:54:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:54:59] 
[2025-10-13 07:54:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:54:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:54:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:54:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:54:59] 
[2025-10-13 07:54:59] 2025-10-13 11:54:34,234 | INFO     | ***************************************
[2025-10-13 07:54:59] 2025-10-13 11:54:34,737 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 07:54:59] 2025-10-13 11:54:34,754 | INFO     | sufficient remaining disk space (29388439552 B)
[2025-10-13 07:54:59] 2025-10-13 11:54:34,754 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:54:59] 2025-10-13 11:54:34,754 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:54:59] 2025-10-13 11:54:34,754 | INFO     | update_server=False
[2025-10-13 07:54:59] 2025-10-13 11:54:34,755 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:54:59] 2025-10-13 11:54:34,755 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:54:59] 2025-10-13 11:54:34,755 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 07:54:59] 2025-10-13 11:54:34,756 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:54:59] 2025-10-13 11:54:34,756 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:54:59] 2025-10-13 11:54:34,756 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:54:59] 2025-10-13 11:54:34,756 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:54:59] 2025-10-13 11:54:34,757 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:54:59] 2025-10-13 11:54:34,757 | INFO     | aborting loop
[2025-10-13 07:54:59] 2025-10-13 11:54:34,828 | INFO     | all data control threads have been joined
[2025-10-13 07:54:59] 2025-10-13 11:54:35,088 | INFO     | all payload control threads have been joined
[2025-10-13 07:54:59] 2025-10-13 11:54:35,216 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:54:59] 2025-10-13 11:54:35,685 | INFO     | all job control threads have been joined
[2025-10-13 07:54:59] 2025-10-13 11:54:35,760 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:54:59] 2025-10-13 11:54:35,762 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:54:59] 2025-10-13 11:54:35,762 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:54:59] 2025-10-13 11:54:35,834 | INFO     | [data] control thread has finished
[2025-10-13 07:54:59] 2025-10-13 11:54:36,093 | INFO     | [payload] control thread has finished
[2025-10-13 07:54:59] 2025-10-13 11:54:36,182 | INFO     | [job] validate thread has finished
[2025-10-13 07:54:59] 2025-10-13 11:54:36,320 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:54:59] 2025-10-13 11:54:36,378 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:54:59] 2025-10-13 11:54:36,401 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:54:59] 2025-10-13 11:54:36,667 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:54:59] 2025-10-13 11:54:36,687 | INFO     | [job] control thread has finished
[2025-10-13 07:54:59] 2025-10-13 11:54:36,800 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:54:59] 2025-10-13 11:54:37,005 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:54:59] 2025-10-13 11:54:37,218 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:54:59] 2025-10-13 11:54:38,761 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:54:59] 2025-10-13 11:54:45,753 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:54:59] 2025-10-13 11:54:46,758 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:54:59] 2025-10-13 11:54:52,720 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:54:59] 2025-10-13 11:54:53,751 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139949561153344)>', '<ExcThread(monitor, started 139948682372864)>']
[2025-10-13 07:54:59] 2025-10-13 11:54:53,853 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:54:59] 2025-10-13 11:54:53,853 | INFO     | [monitor] control thread has ended
[2025-10-13 07:54:59] 2025-10-13 11:54:58,777 | INFO     | all workflow threads have been joined
[2025-10-13 07:54:59] 2025-10-13 11:54:58,777 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:54:59] 2025-10-13 11:54:58,778 | INFO     | traces error code: 0
[2025-10-13 07:54:59] 2025-10-13 11:54:58,778 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:54:59] 2025-10-13 11:54:58,886 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:54:59] 2025-10-13 11:54:58,890 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:54:59] 2025-10-13 11:54:58,893 [wrapper] pilotpid: 31615
[2025-10-13 07:54:59] 2025-10-13 11:54:58,898 [wrapper] Pilot exit status: 0
[2025-10-13 07:54:59] 2025-10-13 11:54:58,913 [wrapper] pandaids: 6842633796
[2025-10-13 07:54:59] 2025-10-13 11:54:58,955 [wrapper] cleanup supervisor_pilot 18658 31616
[2025-10-13 07:54:59] 2025-10-13 11:54:58,959 [wrapper] Test setup, not cleaning
[2025-10-13 07:54:59] 2025-10-13 11:54:58,963 [wrapper] apfmon messages muted
[2025-10-13 07:54:59] 2025-10-13 11:54:58,967 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:54:59] 2025-10-13 11:54:58,971 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:54:59]  *** Error codes and diagnostics ***
[2025-10-13 07:54:59]     "exeErrorCode": 0,
[2025-10-13 07:54:59]     "exeErrorDiag": "",
[2025-10-13 07:54:59]     "pilotErrorCode": 0,
[2025-10-13 07:54:59]     "pilotErrorDiag": "",
[2025-10-13 07:54:59]  *** Listing of results directory ***
[2025-10-13 07:54:59] total 393060
[2025-10-13 07:54:59] -rw-r--r-- 1 boincer umatlas    557409 Oct 13 02:04 pilot3.tar.gz
[2025-10-13 07:54:59] -rwx------ 1 boincer umatlas     36292 Oct 13 02:20 runpilot2-wrapper.sh
[2025-10-13 07:54:59] -rw-r--r-- 1 boincer umatlas      5112 Oct 13 02:20 queuedata.json
[2025-10-13 07:54:59] -rw-r--r-- 1 boincer umatlas       100 Oct 13 06:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:54:59] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 06:49 run_atlas
[2025-10-13 07:54:59] -rw-r--r-- 1 boincer umatlas       105 Oct 13 06:49 job.xml
[2025-10-13 07:54:59] -rw-r--r-- 2 boincer umatlas 215457228 Oct 13 06:49 EVNT.46376901._002807.pool.root.1
[2025-10-13 07:54:59] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 06:49 start_atlas.sh
[2025-10-13 07:54:59] drwxrwx--x 2 boincer umatlas      4096 Oct 13 06:49 shared
[2025-10-13 07:54:59] -rw-r--r-- 2 boincer umatlas    569673 Oct 13 06:49 input.tar.gz
[2025-10-13 07:54:59] -rw-r--r-- 1 boincer umatlas         0 Oct 13 06:49 boinc_lockfile
[2025-10-13 07:54:59] -rw-r--r-- 1 boincer umatlas      2518 Oct 13 06:49 pandaJob.out
[2025-10-13 07:54:59] -rw------- 1 boincer umatlas    972497 Oct 13 06:49 agis_schedconf.cvmfs.json
[2025-10-13 07:54:59] -rw------- 1 boincer umatlas   1560580 Oct 13 06:49 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:54:59] drwx------ 5 boincer umatlas      4096 Oct 13 06:49 pilot3
[2025-10-13 07:54:59] -rw-r--r-- 1 boincer umatlas      5953 Oct 13 07:48 init_data.xml
[2025-10-13 07:54:59] -rw------- 1 boincer umatlas        95 Oct 13 07:53 pilot_heartbeat.json
[2025-10-13 07:54:59] -rw------- 1 boincer umatlas 181231284 Oct 13 07:53 HITS.46376905._136458.pool.root.1
[2025-10-13 07:54:59] -rw-r--r-- 1 boincer umatlas       530 Oct 13 07:54 boinc_task_state.xml
[2025-10-13 07:54:59] -rw------- 1 boincer umatlas      1047 Oct 13 07:54 memory_monitor_summary.json
[2025-10-13 07:54:59] -rw------- 1 boincer umatlas    381751 Oct 13 07:54 log.46376905._136458.job.log.tgz.1
[2025-10-13 07:54:59] -rw------- 1 boincer umatlas      7851 Oct 13 07:54 heartbeat.json
[2025-10-13 07:54:59] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 07:54 boinc_mmap_file
[2025-10-13 07:54:59] -rw-r--r-- 1 boincer umatlas        27 Oct 13 07:54 wrapper_checkpoint.txt
[2025-10-13 07:54:59] -rw------- 1 boincer umatlas      4624 Oct 13 07:54 pilotlog.txt
[2025-10-13 07:54:59] -rw------- 1 boincer umatlas    570732 Oct 13 07:54 log.46376905._136458.job.log.1
[2025-10-13 07:54:59] -rw------- 1 boincer umatlas       357 Oct 13 07:54 output.list
[2025-10-13 07:54:59] -rw-r--r-- 1 boincer umatlas       620 Oct 13 07:54 runtime_log
[2025-10-13 07:54:59] -rw------- 1 boincer umatlas    972800 Oct 13 07:54 result.tar.gz
[2025-10-13 07:54:59] -rw-r--r-- 1 boincer umatlas      8705 Oct 13 07:54 runtime_log.err
[2025-10-13 07:54:59] -rw------- 1 boincer umatlas       659 Oct 13 07:54 MyvNDmA6QS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmwhVMDmGqRgEo.diag
[2025-10-13 07:54:59] -rw-r--r-- 1 boincer umatlas     21775 Oct 13 07:54 stderr.txt
[2025-10-13 07:54:59] HITS file was successfully produced:
[2025-10-13 07:54:59] -rw------- 1 boincer umatlas 181231284 Oct 13 07:53 shared/HITS.pool.root.1
[2025-10-13 07:54:59]  *** Contents of shared directory: ***
[2025-10-13 07:54:59] total 388924
[2025-10-13 07:54:59] -rw-r--r-- 2 boincer umatlas 215457228 Oct 13 06:49 ATLAS.root_0
[2025-10-13 07:54:59] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 06:49 start_atlas.sh
[2025-10-13 07:54:59] -rw-r--r-- 2 boincer umatlas    569673 Oct 13 06:49 input.tar.gz
[2025-10-13 07:54:59] -rw------- 1 boincer umatlas 181231284 Oct 13 07:53 HITS.pool.root.1
[2025-10-13 07:54:59] -rw------- 1 boincer umatlas    972800 Oct 13 07:54 result.tar.gz
07:55:00 (27872): run_atlas exited; CPU time 42412.385649
07:55:00 (27872): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN