Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:37:10 (3280748): wrapper (7.7.26015): starting
06:37:10 (3280748): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 06:37:10] Arguments: --nthreads 8
[2025-10-13 06:37:10] Threads: 8
[2025-10-13 06:37:10] Checking for CVMFS
[2025-10-13 06:37:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:37:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:37:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:37:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:37:11] 2.13.2.0 3269412 37056 375456 151658 0 227 28980044 40960000 21355 16776704 0 480261996 99.849 188055346 36740 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 06:37:11] CVMFS is ok
[2025-10-13 06:37:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:37:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:37:11] Further information can be found at the LHC@home message board.
[2025-10-13 06:37:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:37:11] Checking for apptainer binary...
[2025-10-13 06:37:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:37:11] Running /usr/bin/apptainer --version
[2025-10-13 06:37:11] apptainer version 1.4.3-1.el9
[2025-10-13 06:37:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:37:11] c8-16-2.aglt2.org
[2025-10-13 06:37:11] apptainer works
[2025-10-13 06:37:11] Set ATHENA_PROC_NUMBER=8
[2025-10-13 06:37:11] Set ATHENA_CORE_NUMBER=8
[2025-10-13 06:37:11] Starting ATLAS job with PandaID=6842820327
[2025-10-13 06:37:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:14:31]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:14:31]  scope=mc23_13p6TeV
[2025-10-13 07:14:31]  status=None
[2025-10-13 07:14:31]  status_code=0
[2025-10-13 07:14:31]  storage_token=
[2025-10-13 07:14:31]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6842820327/log.46676269._096680.job.log.tgz.1
[2025-10-13 07:14:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1a/e7/log.46676269._096680.job.log.tgz.1
[2025-10-13 07:14:31]  workdir=None
[2025-10-13 07:14:31] ]
[2025-10-13 07:14:31] 2025-10-13 11:13:35,659 | INFO     | transferring file log.46676269._096680.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6842820327/log.46676269._096680.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 07:14:31] 2025-10-13 11:13:35,660 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6842820327/log.46676269._096680.job.log.tgz.1 /tmp/boinchome/slots/4/log.46676269._096680.job
[2025-10-13 07:14:31] 2025-10-13 11:13:35,674 | INFO     | adding to output.list: log.46676269._096680.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1a/e7/log.46676269._096680.job.log.tg
[2025-10-13 07:14:31] 2025-10-13 11:13:35,675 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 07:14:31] 2025-10-13 11:13:35,675 | INFO     | summary of transferred files:
[2025-10-13 07:14:31] 2025-10-13 11:13:35,675 | INFO     |  -- lfn=log.46676269._096680.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 07:14:31] 2025-10-13 11:13:35,675 | INFO     | stage-out finished correctly
[2025-10-13 07:14:31] 2025-10-13 11:13:36,744 | INFO     | time since job start (2175s) is within the limit (172800.0s)
[2025-10-13 07:14:31] 2025-10-13 11:13:37,036 | WARNING  | process 3302257 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 07:14:31] 2025-10-13 11:13:37,036 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6842820327/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:14:31] 2025-10-13 11:13:37,386 | INFO     | number of running child processes to parent process 3302257: 1
[2025-10-13 07:14:31] 2025-10-13 11:13:37,386 | INFO     | maximum number of monitored processes: 6
[2025-10-13 07:14:31] 2025-10-13 11:13:38,749 | INFO     | time since job start (2177s) is within the limit (172800.0s)
[2025-10-13 07:14:31] 2025-10-13 11:13:38,849 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 07:14:31] 2025-10-13 11:13:39,076 | INFO     | job 6842820327 has state=finished
[2025-10-13 07:14:31] 2025-10-13 11:13:39,076 | INFO     | preparing for final server update for job 6842820327 in state='finished'
[2025-10-13 07:14:31] 2025-10-13 11:13:39,076 | INFO     | this job has now completed (state=finished)
[2025-10-13 07:14:31] 2025-10-13 11:13:39,077 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 07:14:31] 2025-10-13 11:13:39,077 | INFO     | log transfer has been attempted: DONE
[2025-10-13 07:14:31] 2025-10-13 11:13:39,077 | INFO     | job 6842820327 has finished - writing final server update
[2025-10-13 07:14:31] 2025-10-13 11:13:39,077 | INFO     | total number of processed events: 400 (read)
[2025-10-13 07:14:31] 2025-10-13 11:13:39,077 | INFO     | executing command: lscpu
[2025-10-13 07:14:31] 2025-10-13 11:13:39,130 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 07:14:31] 2025-10-13 11:13:39,890 | INFO     | monitor loop #161: job 0:6842820327 is in state 'finished'
[2025-10-13 07:14:31] 2025-10-13 11:13:39,890 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:14:31] 2025-10-13 11:13:40,755 | INFO     | time since job start (2179s) is within the limit (172800.0s)
[2025-10-13 07:14:31] 2025-10-13 11:13:42,249 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 07:14:31] 2025-10-13 11:13:42,254 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3430.4566640625076
[2025-10-13 07:14:31] 2025-10-13 11:13:42,280 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6842820327/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:14:31] 2025-10-13 11:13:42,281 | INFO     | extracted standard info from prmon json
[2025-10-13 07:14:31] 2025-10-13 11:13:42,281 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:14:31] 2025-10-13 11:13:42,281 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:14:31] 2025-10-13 11:13:42,281 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:14:31] 2025-10-13 11:13:42,281 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:14:31] 2025-10-13 11:13:42,281 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:14:31] 2025-10-13 11:13:42,282 | INFO     | sum of square deviations: 7553630.0
[2025-10-13 07:14:31] 2025-10-13 11:13:42,282 | INFO     | sum of deviations: 2368385.999999985
[2025-10-13 07:14:31] 2025-10-13 11:13:42,282 | INFO     | mean x: 1760353027.0
[2025-10-13 07:14:31] 2025-10-13 11:13:42,282 | INFO     | mean y: 2304151.103448276
[2025-10-13 07:14:31] 2025-10-13 11:13:42,282 | INFO     | -- intersect: -549641795.9715866
[2025-10-13 07:14:31] 2025-10-13 11:13:42,282 | INFO     | intersect: -549641795.9715866
[2025-10-13 07:14:31] 2025-10-13 11:13:42,282 | INFO     | chi2: 0.011687980196940884
[2025-10-13 07:14:31] 2025-10-13 11:13:42,282 | INFO     | -- intersect: -549641795.9715866
[2025-10-13 07:14:31] 2025-10-13 11:13:42,282 | INFO     | current memory leak: 0.31 B/s (using 29 data points, chi2=0.01)
[2025-10-13 07:14:31] 2025-10-13 11:13:42,282 | INFO     | could have reported an average CPU frequency of 3592 MHz (5 samples)
[2025-10-13 07:14:31] 2025-10-13 11:13:42,282 | INFO     | ..............................
[2025-10-13 07:14:31] 2025-10-13 11:13:42,282 | INFO     | . Timing measurements:
[2025-10-13 07:14:31] 2025-10-13 11:13:42,282 | INFO     | . get job = 0 s
[2025-10-13 07:14:31] 2025-10-13 11:13:42,282 | INFO     | . initial setup = 2 s
[2025-10-13 07:14:31] 2025-10-13 11:13:42,282 | INFO     | . payload setup = 5 s
[2025-10-13 07:14:31] 2025-10-13 11:13:42,282 | INFO     | . stage-in = 0 s
[2025-10-13 07:14:31] 2025-10-13 11:13:42,282 | INFO     | . payload execution = 2148 s
[2025-10-13 07:14:31] 2025-10-13 11:13:42,282 | INFO     | . stage-out = 0 s
[2025-10-13 07:14:31] 2025-10-13 11:13:42,282 | INFO     | . log creation = 0 s
[2025-10-13 07:14:31] 2025-10-13 11:13:42,282 | INFO     | ..............................
[2025-10-13 07:14:31] 2025-10-13 11:13:42,313 | INFO     | 
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | job summary report
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | --------------------------------------------------
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | PanDA job id: 6842820327
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | task id: 46676269
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | errors: (none)
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | pilot state: finished 
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | transexitcode: 0
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | exeerrorcode: 0
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | exeerrordiag: 
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | exitcode: 0
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | exitmsg: OK
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | cpuconsumptiontime: 15505 s
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | nevents: 400
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | neventsw: 0
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | pid: 3302257
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | pgrp: 3302257
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | corecount: 8
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | event service: False
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | sizes: {0: 2348806, 5: 2349068, 11: 2349124, 2156: 2374246, 2158: 2383244, 2161: 2383300, 2164: 2383654}
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | --------------------------------------------------
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | 
[2025-10-13 07:14:31] 2025-10-13 11:13:42,314 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-13 07:14:31] 2025-10-13 11:13:42,326 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:14:31] 2025-10-13 11:13:42,327 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:14:31] 2025-10-13 11:13:42,327 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:14:31] 2025-10-13 11:13:42,327 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:14:31] 2025-10-13 11:13:42,327 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:14:31] 2025-10-13 11:13:42,327 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:14:31] 2025-10-13 11:13:42,327 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:14:31] 2025-10-13 11:13:42,327 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:14:31] 2025-10-13 11:13:42,327 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:14:31] 2025-10-13 11:13:42,327 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:14:31] 2025-10-13 11:13:42,327 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:14:31] 2025-10-13 11:13:42,327 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:14:31] 2025-10-13 11:13:42,327 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:14:31] 2025-10-13 11:13:42,327 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:14:31] 2025-10-13 11:13:42,327 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:14:31] 2025-10-13 11:13:42,327 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:14:31] 2025-10-13 11:13:42,327 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:14:31] 2025-10-13 11:13:42,327 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:14:31] 2025-10-13 11:13:42,327 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:14:31] 2025-10-13 11:13:42,327 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:14:31] 2025-10-13 11:13:42,327 | INFO     | job 6842820327 has completed (purged errors)
[2025-10-13 07:14:31] 2025-10-13 11:13:42,327 | INFO     | overall cleanup function is called
[2025-10-13 07:14:31] 2025-10-13 11:13:43,334 | INFO     | --- collectZombieJob: --- 10, [3302257]
[2025-10-13 07:14:31] 2025-10-13 11:13:43,334 | INFO     | zombie collector waiting for pid 3302257
[2025-10-13 07:14:31] 2025-10-13 11:13:43,334 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:14:31] 2025-10-13 11:13:43,334 | INFO     | collected zombie processes
[2025-10-13 07:14:31] 2025-10-13 11:13:43,334 | INFO     | will attempt to kill all subprocesses of pid=3302257
[2025-10-13 07:14:31] 2025-10-13 11:13:43,710 | INFO     | process IDs to be killed: [3302257] (in reverse order)
[2025-10-13 07:14:31] 2025-10-13 11:13:43,872 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:14:31] 2025-10-13 11:13:43,872 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:14:31] 2025-10-13 11:13:43,895 | INFO     | did not find any defunct processes belonging to 3302257
[2025-10-13 07:14:31] 2025-10-13 11:13:43,915 | INFO     | did not find any defunct processes belonging to 3302257
[2025-10-13 07:14:31] 2025-10-13 11:13:43,915 | INFO     | ready for new job
[2025-10-13 07:14:31] 2025-10-13 11:13:43,915 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:14:31] 2025-10-13 11:13:43,916 | INFO     | ***************************************
[2025-10-13 07:14:31] 2025-10-13 11:13:43,916 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:14:31] 2025-10-13 11:13:43,916 | INFO     | ***************************************
[2025-10-13 07:14:31] 2025-10-13 11:13:43,916 | INFO     | 
[2025-10-13 07:14:31] 2025-10-13 11:13:43,931 | INFO     | architecture information:
[2025-10-13 07:14:31] 2025-10-13 11:13:43,931 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:14:31] 2025-10-13 11:13:43,942 | INFO     | cat /etc/os-release:
[2025-10-13 07:14:31] NAME="CentOS Linux"
[2025-10-13 07:14:31] VERSION="7 (Core)"
[2025-10-13 07:14:31] ID="centos"
[2025-10-13 07:14:31] ID_LIKE="rhel fedora"
[2025-10-13 07:14:31] VERSION_ID="7"
[2025-10-13 07:14:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:14:31] ANSI_COLOR="0;31"
[2025-10-13 07:14:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:14:31] HOME_URL="https://www.centos.org/"
[2025-10-13 07:14:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:14:31] 
[2025-10-13 07:14:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:14:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:14:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:14:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:14:31] 
[2025-10-13 07:14:31] 2025-10-13 11:13:43,943 | INFO     | ***************************************
[2025-10-13 07:14:31] 2025-10-13 11:13:44,445 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-13 07:14:31] 2025-10-13 11:13:44,457 | INFO     | sufficient remaining disk space (170697687040 B)
[2025-10-13 07:14:31] 2025-10-13 11:13:44,457 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:14:31] 2025-10-13 11:13:44,457 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:14:31] 2025-10-13 11:13:44,457 | INFO     | update_server=False
[2025-10-13 07:14:31] 2025-10-13 11:13:44,458 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:14:31] 2025-10-13 11:13:44,458 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:14:31] 2025-10-13 11:13:44,623 | INFO     | all job control threads have been joined
[2025-10-13 07:14:31] 2025-10-13 11:13:44,801 | INFO     | all data control threads have been joined
[2025-10-13 07:14:31] 2025-10-13 11:13:44,878 | INFO     | all payload control threads have been joined
[2025-10-13 07:14:31] 2025-10-13 11:13:44,884 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:14:31] 2025-10-13 11:13:44,901 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 07:14:31] 2025-10-13 11:13:44,901 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 07:14:31] 2025-10-13 11:13:44,901 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:14:31] 2025-10-13 11:13:44,901 | INFO     | will abort loop
[2025-10-13 07:14:31] 2025-10-13 11:13:45,463 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:14:31] 2025-10-13 11:13:45,629 | INFO     | [job] control thread has finished
[2025-10-13 07:14:31] 2025-10-13 11:13:45,703 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:14:31] 2025-10-13 11:13:45,806 | INFO     | [data] control thread has finished
[2025-10-13 07:14:31] 2025-10-13 11:13:45,852 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:14:31] 2025-10-13 11:13:45,883 | INFO     | [payload] control thread has finished
[2025-10-13 07:14:31] 2025-10-13 11:13:45,906 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:14:31] 2025-10-13 11:13:45,962 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:14:31] 2025-10-13 11:13:46,251 | INFO     | [job] validate thread has finished
[2025-10-13 07:14:31] 2025-10-13 11:13:46,401 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:14:31] 2025-10-13 11:13:46,436 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:14:31] 2025-10-13 11:13:46,463 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:14:31] 2025-10-13 11:13:46,609 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:14:31] 2025-10-13 11:13:46,815 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:14:31] 2025-10-13 11:13:47,324 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:14:31] 2025-10-13 11:13:48,329 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:14:31] 2025-10-13 11:13:48,889 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:14:31] 2025-10-13 11:14:14,331 | INFO     | PID=3287931 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:14:31] 2025-10-13 11:14:14,331 | INFO     | .. there are 31 such processes running
[2025-10-13 07:14:31] 2025-10-13 11:14:14,332 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:14:31] 2025-10-13 11:14:14,332 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:14:31] 2025-10-13 11:14:14,332 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:14:31] 2025-10-13 11:14:24,644 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:14:31] 2025-10-13 11:14:26,286 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139918586046272)>', '<ExcThread(monitor, started 139917795510016)>']
[2025-10-13 07:14:31] 2025-10-13 11:14:26,392 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:14:31] 2025-10-13 11:14:26,392 | INFO     | [monitor] control thread has ended
[2025-10-13 07:14:31] 2025-10-13 11:14:31,311 | INFO     | all workflow threads have been joined
[2025-10-13 07:14:31] 2025-10-13 11:14:31,311 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:14:31] 2025-10-13 11:14:31,311 | INFO     | traces error code: 0
[2025-10-13 07:14:31] 2025-10-13 11:14:31,311 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:14:31] 2025-10-13 11:14:31,391 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:14:31] 2025-10-13 11:14:31,393 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:14:31] 2025-10-13 11:14:31,395 [wrapper] pilotpid: 3287931
[2025-10-13 07:14:31] 2025-10-13 11:14:31,397 [wrapper] Pilot exit status: 0
[2025-10-13 07:14:31] 2025-10-13 11:14:31,403 [wrapper] pandaids: 6842820327
[2025-10-13 07:14:31] 2025-10-13 11:14:31,513 [wrapper] cleanup supervisor_pilot 3660043 3287932
[2025-10-13 07:14:31] 2025-10-13 11:14:31,515 [wrapper] Test setup, not cleaning
[2025-10-13 07:14:31] 2025-10-13 11:14:31,517 [wrapper] apfmon messages muted
[2025-10-13 07:14:31] 2025-10-13 11:14:31,519 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:14:31] 2025-10-13 11:14:31,520 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:14:31]  *** Error codes and diagnostics ***
[2025-10-13 07:14:31]     "exeErrorCode": 0,
[2025-10-13 07:14:31]     "exeErrorDiag": "",
[2025-10-13 07:14:31]     "pilotErrorCode": 0,
[2025-10-13 07:14:31]     "pilotErrorDiag": "",
[2025-10-13 07:14:31]  *** Listing of results directory ***
[2025-10-13 07:14:31] total 406640
[2025-10-13 07:14:31] -rw-r--r--. 1 boincer umatlas    557409 Oct 13 06:28 pilot3.tar.gz
[2025-10-13 07:14:31] -rwx------. 1 boincer umatlas     36292 Oct 13 06:36 runpilot2-wrapper.sh
[2025-10-13 07:14:31] -rw-r--r--. 1 boincer umatlas      5112 Oct 13 06:36 queuedata.json
[2025-10-13 07:14:31] -rw-r--r--. 1 boincer umatlas       100 Oct 13 06:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:14:31] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 06:37 run_atlas
[2025-10-13 07:14:31] -rw-r--r--. 1 boincer umatlas       105 Oct 13 06:37 job.xml
[2025-10-13 07:14:31] -rw-r--r--. 2 boincer umatlas 221696383 Oct 13 06:37 EVNT.46676267._004713.pool.root.1
[2025-10-13 07:14:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:37 start_atlas.sh
[2025-10-13 07:14:31] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 06:37 shared
[2025-10-13 07:14:31] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 06:37 input.tar.gz
[2025-10-13 07:14:31] -rw-r--r--. 1 boincer umatlas         0 Oct 13 06:37 boinc_lockfile
[2025-10-13 07:14:31] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 06:37 pandaJob.out
[2025-10-13 07:14:31] -rw-------. 1 boincer umatlas    972497 Oct 13 06:37 agis_schedconf.cvmfs.json
[2025-10-13 07:14:31] -rw-------. 1 boincer umatlas   1560580 Oct 13 06:37 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:14:31] drwx------. 5 boincer umatlas      4096 Oct 13 06:37 pilot3
[2025-10-13 07:14:31] -rw-r--r--. 1 boincer umatlas      7163 Oct 13 07:10 init_data.xml
[2025-10-13 07:14:31] -rw-r--r--. 1 boincer umatlas       529 Oct 13 07:13 boinc_task_state.xml
[2025-10-13 07:14:31] -rw-------. 1 boincer umatlas 189524547 Oct 13 07:13 HITS.46676269._096680.pool.root.1
[2025-10-13 07:14:31] -rw-------. 1 boincer umatlas      1030 Oct 13 07:13 memory_monitor_summary.json
[2025-10-13 07:14:31] -rw-------. 1 boincer umatlas    291347 Oct 13 07:13 log.46676269._096680.job.log.tgz.1
[2025-10-13 07:14:31] -rw-------. 1 boincer umatlas      7767 Oct 13 07:13 heartbeat.json
[2025-10-13 07:14:31] -rw-------. 1 boincer umatlas        95 Oct 13 07:14 pilot_heartbeat.json
[2025-10-13 07:14:31] -rw-r--r--. 1 boincer umatlas        27 Oct 13 07:14 wrapper_checkpoint.txt
[2025-10-13 07:14:31] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 07:14 boinc_mmap_file
[2025-10-13 07:14:31] -rw-------. 1 boincer umatlas      5011 Oct 13 07:14 pilotlog.txt
[2025-10-13 07:14:31] -rw-------. 1 boincer umatlas    348850 Oct 13 07:14 log.46676269._096680.job.log.1
[2025-10-13 07:14:31] -rw-------. 1 boincer umatlas       357 Oct 13 07:14 output.list
[2025-10-13 07:14:31] -rw-r--r--. 1 boincer umatlas       620 Oct 13 07:14 runtime_log
[2025-10-13 07:14:31] -rw-------. 1 boincer umatlas    655360 Oct 13 07:14 result.tar.gz
[2025-10-13 07:14:31] -rw-r--r--. 1 boincer umatlas      8698 Oct 13 07:14 runtime_log.err
[2025-10-13 07:14:31] -rw-------. 1 boincer umatlas       651 Oct 13 07:14 mNeLDmd5US8n9Rq4apOajLDm4fhM0noT9bVof3QYDmsjVMDmRBdxxn.diag
[2025-10-13 07:14:31] -rw-r--r--. 1 boincer umatlas     21935 Oct 13 07:14 stderr.txt
[2025-10-13 07:14:31] HITS file was successfully produced:
[2025-10-13 07:14:31] -rw-------. 1 boincer umatlas 189524547 Oct 13 07:13 shared/HITS.pool.root.1
[2025-10-13 07:14:31]  *** Contents of shared directory: ***
[2025-10-13 07:14:31] total 402808
[2025-10-13 07:14:31] -rw-r--r--. 2 boincer umatlas 221696383 Oct 13 06:37 ATLAS.root_0
[2025-10-13 07:14:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:37 start_atlas.sh
[2025-10-13 07:14:31] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 06:37 input.tar.gz
[2025-10-13 07:14:31] -rw-------. 1 boincer umatlas 189524547 Oct 13 07:13 HITS.pool.root.1
[2025-10-13 07:14:31] -rw-------. 1 boincer umatlas    655360 Oct 13 07:14 result.tar.gz
07:14:33 (3280748): run_atlas exited; CPU time 15575.344248
07:14:33 (3280748): called boinc_finish(0)

</stderr_txt>
]]>

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