Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:36:48 (3274702): wrapper (7.7.26015): starting
06:36:48 (3274702): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 06:36:48] Arguments: --nthreads 8
[2025-10-13 06:36:48] Threads: 8
[2025-10-13 06:36:48] Checking for CVMFS
[2025-10-13 06:36:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:36:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:36:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:36:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:36:49] 2.13.2.0 3269412 37055 375456 151658 1 227 28980044 40960000 21217 16776704 0 480246486 99.849 188055346 36740 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 06:36:49] CVMFS is ok
[2025-10-13 06:36:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:36:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:36:49] Further information can be found at the LHC@home message board.
[2025-10-13 06:36:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:36:49] Checking for apptainer binary...
[2025-10-13 06:36:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:36:49] Running /usr/bin/apptainer --version
[2025-10-13 06:36:49] apptainer version 1.4.3-1.el9
[2025-10-13 06:36:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:36:49] c8-16-2.aglt2.org
[2025-10-13 06:36:49] apptainer works
[2025-10-13 06:36:49] Set ATHENA_PROC_NUMBER=8
[2025-10-13 06:36:49] Set ATHENA_CORE_NUMBER=8
[2025-10-13 06:36:49] Starting ATLAS job with PandaID=6842820326
[2025-10-13 06:36:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:14:24]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:14:24]  protocol_id=None
[2025-10-13 07:14:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 07:14:24]  replicas=None
[2025-10-13 07:14:24]  scope=mc23_13p6TeV
[2025-10-13 07:14:24]  status=None
[2025-10-13 07:14:24]  status_code=0
[2025-10-13 07:14:24]  storage_token=
[2025-10-13 07:14:24]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6842820326/log.46676269._096679.job.log.tgz.1
[2025-10-13 07:14:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/ef/log.46676269._096679.job.log.tgz.1
[2025-10-13 07:14:24]  workdir=None
[2025-10-13 07:14:24] ]
[2025-10-13 07:14:24] 2025-10-13 11:13:46,282 | INFO     | transferring file log.46676269._096679.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6842820326/log.46676269._096679.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 07:14:24] 2025-10-13 11:13:46,282 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6842820326/log.46676269._096679.job.log.tgz.1 /tmp/boinchome/slots/2/log.46676269._096679.job
[2025-10-13 07:14:24] 2025-10-13 11:13:46,296 | INFO     | adding to output.list: log.46676269._096679.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/ef/log.46676269._096679.job.log.tg
[2025-10-13 07:14:24] 2025-10-13 11:13:46,296 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 07:14:24] 2025-10-13 11:13:46,296 | INFO     | summary of transferred files:
[2025-10-13 07:14:24] 2025-10-13 11:13:46,296 | INFO     |  -- lfn=log.46676269._096679.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 07:14:24] 2025-10-13 11:13:46,296 | INFO     | stage-out finished correctly
[2025-10-13 07:14:24] 2025-10-13 11:13:46,890 | INFO     | time since job start (2207s) is within the limit (172800.0s)
[2025-10-13 07:14:24] 2025-10-13 11:13:48,488 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 07:14:24] 2025-10-13 11:13:48,895 | INFO     | time since job start (2209s) is within the limit (172800.0s)
[2025-10-13 07:14:24] 2025-10-13 11:13:49,210 | INFO     | job 6842820326 has state=finished
[2025-10-13 07:14:24] 2025-10-13 11:13:49,210 | INFO     | preparing for final server update for job 6842820326 in state='finished'
[2025-10-13 07:14:24] 2025-10-13 11:13:49,211 | INFO     | this job has now completed (state=finished)
[2025-10-13 07:14:24] 2025-10-13 11:13:49,211 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 07:14:24] 2025-10-13 11:13:49,211 | INFO     | log transfer has been attempted: DONE
[2025-10-13 07:14:24] 2025-10-13 11:13:49,211 | INFO     | job 6842820326 has finished - writing final server update
[2025-10-13 07:14:24] 2025-10-13 11:13:49,211 | INFO     | total number of processed events: 400 (read)
[2025-10-13 07:14:24] 2025-10-13 11:13:49,211 | INFO     | executing command: lscpu
[2025-10-13 07:14:24] 2025-10-13 11:13:49,263 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 07:14:24] 2025-10-13 11:13:50,279 | WARNING  | process 3288852 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 07:14:24] 2025-10-13 11:13:50,280 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6842820326/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:14:24] 2025-10-13 11:13:50,632 | INFO     | number of running child processes to parent process 3288852: 1
[2025-10-13 07:14:24] 2025-10-13 11:13:50,632 | INFO     | maximum number of monitored processes: 6
[2025-10-13 07:14:24] 2025-10-13 11:13:50,901 | INFO     | time since job start (2211s) is within the limit (172800.0s)
[2025-10-13 07:14:24] 2025-10-13 11:13:52,338 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 07:14:24] 2025-10-13 11:13:52,355 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3434.737570312506
[2025-10-13 07:14:24] 2025-10-13 11:13:52,363 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6842820326/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:14:24] 2025-10-13 11:13:52,364 | INFO     | extracted standard info from prmon json
[2025-10-13 07:14:24] 2025-10-13 11:13:52,364 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:14:24] 2025-10-13 11:13:52,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:14:24] 2025-10-13 11:13:52,364 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:14:24] 2025-10-13 11:13:52,364 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:14:24] 2025-10-13 11:13:52,365 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:14:24] 2025-10-13 11:13:52,365 | INFO     | sum of square deviations: 7553630.0
[2025-10-13 07:14:24] 2025-10-13 11:13:52,365 | INFO     | sum of deviations: 139949189.0
[2025-10-13 07:14:24] 2025-10-13 11:13:52,365 | INFO     | mean x: 1760353005.0
[2025-10-13 07:14:24] 2025-10-13 11:13:52,365 | INFO     | mean y: 2297542.206896552
[2025-10-13 07:14:24] 2025-10-13 11:13:52,365 | INFO     | -- intersect: -32612481763.03614
[2025-10-13 07:14:24] 2025-10-13 11:13:52,365 | INFO     | intersect: -32612481763.03614
[2025-10-13 07:14:24] 2025-10-13 11:13:52,365 | INFO     | chi2: 0.007366922950404441
[2025-10-13 07:14:24] 2025-10-13 11:13:52,365 | INFO     | -- intersect: -32612481763.03614
[2025-10-13 07:14:24] 2025-10-13 11:13:52,366 | INFO     | current memory leak: 18.53 B/s (using 29 data points, chi2=0.01)
[2025-10-13 07:14:24] 2025-10-13 11:13:52,366 | INFO     | could have reported an average CPU frequency of 3594 MHz (5 samples)
[2025-10-13 07:14:24] 2025-10-13 11:13:52,366 | INFO     | ..............................
[2025-10-13 07:14:24] 2025-10-13 11:13:52,366 | INFO     | . Timing measurements:
[2025-10-13 07:14:24] 2025-10-13 11:13:52,366 | INFO     | . get job = 0 s
[2025-10-13 07:14:24] 2025-10-13 11:13:52,366 | INFO     | . initial setup = 2 s
[2025-10-13 07:14:24] 2025-10-13 11:13:52,366 | INFO     | . payload setup = 5 s
[2025-10-13 07:14:24] 2025-10-13 11:13:52,366 | INFO     | . stage-in = 0 s
[2025-10-13 07:14:24] 2025-10-13 11:13:52,366 | INFO     | . payload execution = 2181 s
[2025-10-13 07:14:24] 2025-10-13 11:13:52,366 | INFO     | . stage-out = 0 s
[2025-10-13 07:14:24] 2025-10-13 11:13:52,366 | INFO     | . log creation = 0 s
[2025-10-13 07:14:24] 2025-10-13 11:13:52,366 | INFO     | ..............................
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | 
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | job summary report
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | --------------------------------------------------
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | PanDA job id: 6842820326
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | task id: 46676269
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | errors: (none)
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | pilot state: finished 
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | transexitcode: 0
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | exeerrorcode: 0
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | exeerrordiag: 
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | exitcode: 0
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | exitmsg: OK
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | cpuconsumptiontime: 16134 s
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | nevents: 400
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | neventsw: 0
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | pid: 3288852
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | pgrp: 3288852
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | corecount: 8
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | event service: False
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | sizes: {0: 2348854, 5: 2349116, 11: 2349172, 2190: 2383319, 2193: 2383319, 2196: 2383545}
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | --------------------------------------------------
[2025-10-13 07:14:24] 2025-10-13 11:13:52,403 | INFO     | 
[2025-10-13 07:14:24] 2025-10-13 11:13:52,404 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 07:14:24] 2025-10-13 11:13:52,417 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:14:24] 2025-10-13 11:13:52,417 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:14:24] 2025-10-13 11:13:52,417 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:14:24] 2025-10-13 11:13:52,417 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:14:24] 2025-10-13 11:13:52,417 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:14:24] 2025-10-13 11:13:52,417 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:14:24] 2025-10-13 11:13:52,417 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:14:24] 2025-10-13 11:13:52,417 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:14:24] 2025-10-13 11:13:52,417 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:14:24] 2025-10-13 11:13:52,417 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:14:24] 2025-10-13 11:13:52,417 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:14:24] 2025-10-13 11:13:52,417 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:14:24] 2025-10-13 11:13:52,417 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:14:24] 2025-10-13 11:13:52,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:14:24] 2025-10-13 11:13:52,418 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:14:24] 2025-10-13 11:13:52,418 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:14:24] 2025-10-13 11:13:52,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:14:24] 2025-10-13 11:13:52,418 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:14:24] 2025-10-13 11:13:52,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:14:24] 2025-10-13 11:13:52,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:14:24] 2025-10-13 11:13:52,418 | INFO     | job 6842820326 has completed (purged errors)
[2025-10-13 07:14:24] 2025-10-13 11:13:52,418 | INFO     | overall cleanup function is called
[2025-10-13 07:14:24] 2025-10-13 11:13:53,425 | INFO     | --- collectZombieJob: --- 10, [3288852]
[2025-10-13 07:14:24] 2025-10-13 11:13:53,425 | INFO     | zombie collector waiting for pid 3288852
[2025-10-13 07:14:24] 2025-10-13 11:13:53,425 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:14:24] 2025-10-13 11:13:53,425 | INFO     | collected zombie processes
[2025-10-13 07:14:24] 2025-10-13 11:13:53,425 | INFO     | will attempt to kill all subprocesses of pid=3288852
[2025-10-13 07:14:24] 2025-10-13 11:13:53,780 | INFO     | process IDs to be killed: [3288852] (in reverse order)
[2025-10-13 07:14:24] 2025-10-13 11:13:53,944 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:14:24] 2025-10-13 11:13:53,944 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:14:24] 2025-10-13 11:13:53,967 | INFO     | did not find any defunct processes belonging to 3288852
[2025-10-13 07:14:24] 2025-10-13 11:13:53,985 | INFO     | did not find any defunct processes belonging to 3288852
[2025-10-13 07:14:24] 2025-10-13 11:13:53,985 | INFO     | ready for new job
[2025-10-13 07:14:24] 2025-10-13 11:13:53,985 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:14:24] 2025-10-13 11:13:53,986 | INFO     | ***************************************
[2025-10-13 07:14:24] 2025-10-13 11:13:53,986 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:14:24] 2025-10-13 11:13:53,986 | INFO     | ***************************************
[2025-10-13 07:14:24] 2025-10-13 11:13:53,986 | INFO     | 
[2025-10-13 07:14:24] 2025-10-13 11:13:54,002 | INFO     | architecture information:
[2025-10-13 07:14:24] 2025-10-13 11:13:54,002 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:14:24] 2025-10-13 11:13:54,013 | INFO     | cat /etc/os-release:
[2025-10-13 07:14:24] NAME="CentOS Linux"
[2025-10-13 07:14:24] VERSION="7 (Core)"
[2025-10-13 07:14:24] ID="centos"
[2025-10-13 07:14:24] ID_LIKE="rhel fedora"
[2025-10-13 07:14:24] VERSION_ID="7"
[2025-10-13 07:14:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:14:24] ANSI_COLOR="0;31"
[2025-10-13 07:14:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:14:24] HOME_URL="https://www.centos.org/"
[2025-10-13 07:14:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:14:24] 
[2025-10-13 07:14:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:14:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:14:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:14:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:14:24] 
[2025-10-13 07:14:24] 2025-10-13 11:13:54,013 | INFO     | ***************************************
[2025-10-13 07:14:24] 2025-10-13 11:13:54,516 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 07:14:24] 2025-10-13 11:13:54,528 | INFO     | sufficient remaining disk space (170696638464 B)
[2025-10-13 07:14:24] 2025-10-13 11:13:54,529 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:14:24] 2025-10-13 11:13:54,529 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:14:24] 2025-10-13 11:13:54,529 | INFO     | update_server=False
[2025-10-13 07:14:24] 2025-10-13 11:13:54,529 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:14:24] 2025-10-13 11:13:54,529 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:14:24] 2025-10-13 11:13:54,529 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:14:24] 2025-10-13 11:13:54,529 | INFO     | aborting loop
[2025-10-13 07:14:24] 2025-10-13 11:13:54,545 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:14:24] 2025-10-13 11:13:54,864 | INFO     | all data control threads have been joined
[2025-10-13 07:14:24] 2025-10-13 11:13:54,999 | INFO     | all job control threads have been joined
[2025-10-13 07:14:24] 2025-10-13 11:13:55,534 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:14:24] 2025-10-13 11:13:55,535 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:14:24] 2025-10-13 11:13:55,793 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:14:24] 2025-10-13 11:13:55,794 | INFO     | [job] validate thread has finished
[2025-10-13 07:14:24] 2025-10-13 11:13:55,866 | INFO     | [data] control thread has finished
[2025-10-13 07:14:24] 2025-10-13 11:13:55,945 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:14:24] 2025-10-13 11:13:55,951 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:14:24] 2025-10-13 11:13:55,962 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:14:24] 2025-10-13 11:13:55,968 | INFO     | all payload control threads have been joined
[2025-10-13 07:14:24] 2025-10-13 11:13:56,004 | INFO     | [job] control thread has finished
[2025-10-13 07:14:24] 2025-10-13 11:13:56,108 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:14:24] 2025-10-13 11:13:56,534 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:14:24] 2025-10-13 11:13:56,573 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:14:24] 2025-10-13 11:13:56,974 | INFO     | [payload] control thread has finished
[2025-10-13 07:14:24] 2025-10-13 11:13:57,412 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:14:24] 2025-10-13 11:13:58,418 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:14:24] 2025-10-13 11:13:58,550 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:14:24] 2025-10-13 11:14:02,350 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:14:24] 2025-10-13 11:14:04,911 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:14:24] 2025-10-13 11:14:05,916 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:14:24] 2025-10-13 11:14:07,886 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140643938191168)>', '<ExcThread(monitor, started 140643418478336)>']
[2025-10-13 07:14:24] 2025-10-13 11:14:12,902 | INFO     | all workflow threads have been joined
[2025-10-13 07:14:24] 2025-10-13 11:14:12,902 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:14:24] 2025-10-13 11:14:12,902 | INFO     | traces error code: 0
[2025-10-13 07:14:24] 2025-10-13 11:14:12,902 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:14:24] 2025-10-13 11:14:24,435 | INFO     | PID=3278409 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:14:24] 2025-10-13 11:14:24,436 | INFO     | .. there are 31 such processes running
[2025-10-13 07:14:24] 2025-10-13 11:14:24,436 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:14:24] 2025-10-13 11:14:24,436 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:14:24] 2025-10-13 11:14:24,436 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:14:24] 2025-10-13 11:14:24,436 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:14:24] 2025-10-13 11:14:24,436 | INFO     | [monitor] control thread has ended
[2025-10-13 07:14:24] 2025-10-13 11:14:24,563 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:14:24] 2025-10-13 11:14:24,565 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:14:24] 2025-10-13 11:14:24,567 [wrapper] pilotpid: 3278409
[2025-10-13 07:14:24] 2025-10-13 11:14:24,569 [wrapper] Pilot exit status: 0
[2025-10-13 07:14:24] 2025-10-13 11:14:24,576 [wrapper] pandaids: 6842820326
[2025-10-13 07:14:24] 2025-10-13 11:14:24,686 [wrapper] cleanup supervisor_pilot 3656107 3278410
[2025-10-13 07:14:24] 2025-10-13 11:14:24,688 [wrapper] Test setup, not cleaning
[2025-10-13 07:14:24] 2025-10-13 11:14:24,689 [wrapper] apfmon messages muted
[2025-10-13 07:14:24] 2025-10-13 11:14:24,691 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:14:24] 2025-10-13 11:14:24,692 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:14:24]  *** Error codes and diagnostics ***
[2025-10-13 07:14:24]     "exeErrorCode": 0,
[2025-10-13 07:14:24]     "exeErrorDiag": "",
[2025-10-13 07:14:24]     "pilotErrorCode": 0,
[2025-10-13 07:14:24]     "pilotErrorDiag": "",
[2025-10-13 07:14:24]  *** Listing of results directory ***
[2025-10-13 07:14:24] total 406692
[2025-10-13 07:14:24] -rw-r--r--. 1 boincer umatlas    557409 Oct 13 06:28 pilot3.tar.gz
[2025-10-13 07:14:24] -rwx------. 1 boincer umatlas     36292 Oct 13 06:36 runpilot2-wrapper.sh
[2025-10-13 07:14:24] -rw-r--r--. 1 boincer umatlas      5112 Oct 13 06:36 queuedata.json
[2025-10-13 07:14:24] -rw-r--r--. 1 boincer umatlas       100 Oct 13 06:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:14:24] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 06:36 run_atlas
[2025-10-13 07:14:24] -rw-r--r--. 1 boincer umatlas       105 Oct 13 06:36 job.xml
[2025-10-13 07:14:24] -rw-r--r--. 2 boincer umatlas 220582207 Oct 13 06:36 EVNT.46676267._002198.pool.root.1
[2025-10-13 07:14:24] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:36 start_atlas.sh
[2025-10-13 07:14:24] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 06:36 shared
[2025-10-13 07:14:24] -rw-r--r--. 2 boincer umatlas    569675 Oct 13 06:36 input.tar.gz
[2025-10-13 07:14:24] -rw-r--r--. 1 boincer umatlas         0 Oct 13 06:36 boinc_lockfile
[2025-10-13 07:14:24] -rw-r--r--. 1 boincer umatlas      2548 Oct 13 06:36 pandaJob.out
[2025-10-13 07:14:24] -rw-------. 1 boincer umatlas    972497 Oct 13 06:36 agis_schedconf.cvmfs.json
[2025-10-13 07:14:24] -rw-------. 1 boincer umatlas   1560580 Oct 13 06:36 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:14:24] drwx------. 5 boincer umatlas      4096 Oct 13 06:37 pilot3
[2025-10-13 07:14:24] -rw-r--r--. 1 boincer umatlas      7163 Oct 13 07:10 init_data.xml
[2025-10-13 07:14:24] -rw-------. 1 boincer umatlas 190711299 Oct 13 07:13 HITS.46676269._096679.pool.root.1
[2025-10-13 07:14:24] -rw-r--r--. 1 boincer umatlas       529 Oct 13 07:13 boinc_task_state.xml
[2025-10-13 07:14:24] -rw-------. 1 boincer umatlas      1033 Oct 13 07:13 memory_monitor_summary.json
[2025-10-13 07:14:24] -rw-------. 1 boincer umatlas        95 Oct 13 07:13 pilot_heartbeat.json
[2025-10-13 07:14:24] -rw-------. 1 boincer umatlas    276667 Oct 13 07:13 log.46676269._096679.job.log.tgz.1
[2025-10-13 07:14:24] -rw-------. 1 boincer umatlas      7769 Oct 13 07:13 heartbeat.json
[2025-10-13 07:14:24] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 07:14 boinc_mmap_file
[2025-10-13 07:14:24] -rw-r--r--. 1 boincer umatlas        27 Oct 13 07:14 wrapper_checkpoint.txt
[2025-10-13 07:14:24] -rw-------. 1 boincer umatlas       823 Oct 13 07:14 pilotlog.txt
[2025-10-13 07:14:24] -rw-------. 1 boincer umatlas    352675 Oct 13 07:14 log.46676269._096679.job.log.1
[2025-10-13 07:14:24] -rw-------. 1 boincer umatlas       357 Oct 13 07:14 output.list
[2025-10-13 07:14:24] -rw-r--r--. 1 boincer umatlas       620 Oct 13 07:14 runtime_log
[2025-10-13 07:14:24] -rw-------. 1 boincer umatlas    645120 Oct 13 07:14 result.tar.gz
[2025-10-13 07:14:24] -rw-r--r--. 1 boincer umatlas      8698 Oct 13 07:14 runtime_log.err
[2025-10-13 07:14:24] -rw-------. 1 boincer umatlas       650 Oct 13 07:14 lmcLDmd5US8n9Rq4apOajLDm4fhM0noT9bVof3QYDmrjVMDm46ty9n.diag
[2025-10-13 07:14:24] -rw-r--r--. 1 boincer umatlas     21749 Oct 13 07:14 stderr.txt
[2025-10-13 07:14:24] HITS file was successfully produced:
[2025-10-13 07:14:24] -rw-------. 1 boincer umatlas 190711299 Oct 13 07:13 shared/HITS.pool.root.1
[2025-10-13 07:14:24]  *** Contents of shared directory: ***
[2025-10-13 07:14:24] total 402876
[2025-10-13 07:14:24] -rw-r--r--. 2 boincer umatlas 220582207 Oct 13 06:36 ATLAS.root_0
[2025-10-13 07:14:24] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:36 start_atlas.sh
[2025-10-13 07:14:24] -rw-r--r--. 2 boincer umatlas    569675 Oct 13 06:36 input.tar.gz
[2025-10-13 07:14:24] -rw-------. 1 boincer umatlas 190711299 Oct 13 07:13 HITS.pool.root.1
[2025-10-13 07:14:24] -rw-------. 1 boincer umatlas    645120 Oct 13 07:14 result.tar.gz
07:14:26 (3274702): run_atlas exited; CPU time 16187.861273
07:14:26 (3274702): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN