Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:45:47 (500572): wrapper (7.7.26015): starting
06:45:47 (500572): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 06:45:47] Arguments: --nthreads 8
[2025-10-13 06:45:47] Threads: 8
[2025-10-13 06:45:47] Checking for CVMFS
[2025-10-13 06:45:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:45:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:45:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:45:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:45:50] 2.13.2.0 276976 137628 350240 151658 2 415 19313000 32935937 35807 16776704 0 267765962 99.601 264380423 20518 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 06:45:50] CVMFS is ok
[2025-10-13 06:45:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:45:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:45:50] Further information can be found at the LHC@home message board.
[2025-10-13 06:45:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:45:50] Checking for apptainer binary...
[2025-10-13 06:45:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:45:50] Running /usr/bin/apptainer --version
[2025-10-13 06:45:50] apptainer version 1.4.3-1.el9
[2025-10-13 06:45:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:45:51] c6-8-25-3.aglt2.org
[2025-10-13 06:45:51] apptainer works
[2025-10-13 06:45:52] Set ATHENA_PROC_NUMBER=8
[2025-10-13 06:45:52] Set ATHENA_CORE_NUMBER=8
[2025-10-13 06:45:52] Starting ATLAS job with PandaID=6842820324
[2025-10-13 06:45:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:14:59]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:14:59] 2025-10-13 15:13:53,669 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 11:14:59] 2025-10-13 15:13:53,685 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2653.845375
[2025-10-13 11:14:59] 2025-10-13 15:13:53,708 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6842820324/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 11:14:59] 2025-10-13 15:13:53,714 | INFO     | extracted standard info from prmon json
[2025-10-13 11:14:59] 2025-10-13 15:13:53,715 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 11:14:59] 2025-10-13 15:13:53,715 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 11:14:59] 2025-10-13 15:13:53,715 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:14:59] 2025-10-13 15:13:53,715 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:14:59] 2025-10-13 15:13:53,720 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:14:59] 2025-10-13 15:13:53,724 | INFO     | sum of square deviations: 5449410971.061534
[2025-10-13 11:14:59] 2025-10-13 15:13:53,726 | INFO     | sum of deviations: 87159611538.88458
[2025-10-13 11:14:59] 2025-10-13 15:13:53,728 | INFO     | mean x: 1760360507.7769232
[2025-10-13 11:14:59] 2025-10-13 15:13:53,728 | INFO     | mean y: 2096431.4807692308
[2025-10-13 11:14:59] 2025-10-13 15:13:53,728 | INFO     | -- intersect: -28153669180.80557
[2025-10-13 11:14:59] 2025-10-13 15:13:53,728 | INFO     | intersect: -28153669180.80557
[2025-10-13 11:14:59] 2025-10-13 15:13:53,729 | INFO     | chi2: 3.369763212608146
[2025-10-13 11:14:59] 2025-10-13 15:13:53,729 | INFO     | sum of square deviations: 5141017845.670622
[2025-10-13 11:14:59] 2025-10-13 15:13:53,735 | INFO     | sum of deviations: 97537028328.23532
[2025-10-13 11:14:59] 2025-10-13 15:13:53,735 | INFO     | mean x: 1760360355.282353
[2025-10-13 11:14:59] 2025-10-13 15:13:53,735 | INFO     | mean y: 2101451.9411764704
[2025-10-13 11:14:59] 2025-10-13 15:13:53,735 | INFO     | -- intersect: -33396016001.720325
[2025-10-13 11:14:59] 2025-10-13 15:13:53,735 | INFO     | intersect: -33396016001.720325
[2025-10-13 11:14:59] 2025-10-13 15:13:53,736 | INFO     | chi2: 2.7190440124247974
[2025-10-13 11:14:59] 2025-10-13 15:13:53,736 | INFO     | current chi2=2.7190440124247974 (change=19.310531901726762 %)
[2025-10-13 11:14:59] 2025-10-13 15:13:53,736 | INFO     | right removable region: 254
[2025-10-13 11:14:59] 2025-10-13 15:13:53,736 | INFO     | sum of square deviations: 5140973925.670622
[2025-10-13 11:14:59] 2025-10-13 15:13:53,738 | INFO     | sum of deviations: 34072457016.02355
[2025-10-13 11:14:59] 2025-10-13 15:13:53,738 | INFO     | mean x: 1760360660.282353
[2025-10-13 11:14:59] 2025-10-13 15:13:53,738 | INFO     | mean y: 2122583.694117647
[2025-10-13 11:14:59] 2025-10-13 15:13:53,738 | INFO     | -- intersect: -11664891059.51263
[2025-10-13 11:14:59] 2025-10-13 15:13:53,738 | INFO     | intersect: -11664891059.51263
[2025-10-13 11:14:59] 2025-10-13 15:13:53,738 | INFO     | chi2: 1.059614633286844
[2025-10-13 11:14:59] 2025-10-13 15:13:53,739 | INFO     | current chi2=1.059614633286844 (change=68.55521986464093 %)
[2025-10-13 11:14:59] 2025-10-13 15:13:53,739 | INFO     | sum of square deviations: 4844443865.45602
[2025-10-13 11:14:59] 2025-10-13 15:13:53,744 | INFO     | sum of deviations: 15630859700.352001
[2025-10-13 11:14:59] 2025-10-13 15:13:53,745 | INFO     | mean x: 1760360812.776
[2025-10-13 11:14:59] 2025-10-13 15:13:53,745 | INFO     | mean y: 2132033.292
[2025-10-13 11:14:59] 2025-10-13 15:13:53,745 | INFO     | -- intersect: -5677767177.1634245
[2025-10-13 11:14:59] 2025-10-13 15:13:53,745 | INFO     | intersect: -5677767177.1634245
[2025-10-13 11:14:59] 2025-10-13 15:13:53,746 | INFO     | chi2: 0.8062802479352509
[2025-10-13 11:14:59] 2025-10-13 15:13:53,746 | INFO     | current chi2=0.8062802479352509 (change=23.90816221231006 %)
[2025-10-13 11:14:59] 2025-10-13 15:13:53,746 | INFO     | left removable region: 20
[2025-10-13 11:14:59] 2025-10-13 15:13:53,746 | INFO     | sum of square deviations: 3972506198.4444294
[2025-10-13 11:14:59] 2025-10-13 15:13:53,747 | INFO     | sum of deviations: 32502676525.444447
[2025-10-13 11:14:59] 2025-10-13 15:13:53,748 | INFO     | mean x: 1760360934.7777777
[2025-10-13 11:14:59] 2025-10-13 15:13:53,748 | INFO     | mean y: 2134317.9316239315
[2025-10-13 11:14:59] 2025-10-13 15:13:53,748 | INFO     | -- intersect: -14400975248.899555
[2025-10-13 11:14:59] 2025-10-13 15:13:53,748 | INFO     | intersect: -14400975248.899555
[2025-10-13 11:14:59] 2025-10-13 15:13:53,748 | INFO     | chi2: 0.08980574571872132
[2025-10-13 11:14:59] 2025-10-13 15:13:53,748 | INFO     | -- intersect: -14400975248.899555
[2025-10-13 11:14:59] 2025-10-13 15:13:53,748 | INFO     | current memory leak: 8.18 B/s (using 234 data points, chi2=0.09)
[2025-10-13 11:14:59] 2025-10-13 15:13:53,749 | INFO     | could have reported an average CPU frequency of 2652 MHz (12 samples)
[2025-10-13 11:14:59] 2025-10-13 15:13:53,749 | INFO     | ..............................
[2025-10-13 11:14:59] 2025-10-13 15:13:53,749 | INFO     | . Timing measurements:
[2025-10-13 11:14:59] 2025-10-13 15:13:53,749 | INFO     | . get job = 1 s
[2025-10-13 11:14:59] 2025-10-13 15:13:53,750 | INFO     | . initial setup = 7 s
[2025-10-13 11:14:59] 2025-10-13 15:13:53,750 | INFO     | . payload setup = 48 s
[2025-10-13 11:14:59] 2025-10-13 15:13:53,750 | INFO     | . stage-in = 0 s
[2025-10-13 11:14:59] 2025-10-13 15:13:53,750 | INFO     | . payload execution = 15833 s
[2025-10-13 11:14:59] 2025-10-13 15:13:53,750 | INFO     | . stage-out = 2 s
[2025-10-13 11:14:59] 2025-10-13 15:13:53,750 | INFO     | . log creation = 0 s
[2025-10-13 11:14:59] 2025-10-13 15:13:53,754 | INFO     | ..............................
[2025-10-13 11:14:59] 2025-10-13 15:13:53,852 | INFO     | 
[2025-10-13 11:14:59] 2025-10-13 15:13:53,853 | INFO     | job summary report
[2025-10-13 11:14:59] 2025-10-13 15:13:53,853 | INFO     | --------------------------------------------------
[2025-10-13 11:14:59] 2025-10-13 15:13:53,853 | INFO     | PanDA job id: 6842820324
[2025-10-13 11:14:59] 2025-10-13 15:13:53,853 | INFO     | task id: 46676269
[2025-10-13 11:14:59] 2025-10-13 15:13:53,853 | INFO     | errors: (none)
[2025-10-13 11:14:59] 2025-10-13 15:13:53,853 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:14:59] 2025-10-13 15:13:53,853 | INFO     | pilot state: finished 
[2025-10-13 11:14:59] 2025-10-13 15:13:53,853 | INFO     | transexitcode: 0
[2025-10-13 11:14:59] 2025-10-13 15:13:53,853 | INFO     | exeerrorcode: 0
[2025-10-13 11:14:59] 2025-10-13 15:13:53,853 | INFO     | exeerrordiag: 
[2025-10-13 11:14:59] 2025-10-13 15:13:53,853 | INFO     | exitcode: 0
[2025-10-13 11:14:59] 2025-10-13 15:13:53,853 | INFO     | exitmsg: OK
[2025-10-13 11:14:59] 2025-10-13 15:13:53,853 | INFO     | cpuconsumptiontime: 51684 s
[2025-10-13 11:14:59] 2025-10-13 15:13:53,854 | INFO     | nevents: 400
[2025-10-13 11:14:59] 2025-10-13 15:13:53,854 | INFO     | neventsw: 0
[2025-10-13 11:14:59] 2025-10-13 15:13:53,854 | INFO     | pid: 538239
[2025-10-13 11:14:59] 2025-10-13 15:13:53,854 | INFO     | pgrp: 538239
[2025-10-13 11:14:59] 2025-10-13 15:13:53,854 | INFO     | corecount: 8
[2025-10-13 11:14:59] 2025-10-13 15:13:53,854 | INFO     | event service: False
[2025-10-13 11:14:59] 2025-10-13 15:13:53,854 | INFO     | sizes: {0: 2348635, 1: 2348834, 12: 2348834, 23: 2348862, 35: 2348890, 45: 2349180, 46: 2349336, 15886: 2380712, 15889: 2389710, 15890: 2389766, 15903: 2389960}
[2025-10-13 11:14:59] 2025-10-13 15:13:53,854 | INFO     | --------------------------------------------------
[2025-10-13 11:14:59] 2025-10-13 15:13:53,854 | INFO     | 
[2025-10-13 11:14:59] 2025-10-13 15:13:53,854 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-13 11:14:59] 2025-10-13 15:13:53,884 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:14:59] 2025-10-13 15:13:53,885 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:14:59] 2025-10-13 15:13:53,885 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:14:59] 2025-10-13 15:13:53,885 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:14:59] 2025-10-13 15:13:53,885 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:14:59] 2025-10-13 15:13:53,885 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:14:59] 2025-10-13 15:13:53,885 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:14:59] 2025-10-13 15:13:53,885 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:14:59] 2025-10-13 15:13:53,885 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:14:59] 2025-10-13 15:13:53,885 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:14:59] 2025-10-13 15:13:53,885 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:14:59] 2025-10-13 15:13:53,886 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:14:59] 2025-10-13 15:13:53,886 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:14:59] 2025-10-13 15:13:53,886 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:14:59] 2025-10-13 15:13:53,886 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:14:59] 2025-10-13 15:13:53,886 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:14:59] 2025-10-13 15:13:53,886 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:14:59] 2025-10-13 15:13:53,886 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:14:59] 2025-10-13 15:13:53,886 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:14:59] 2025-10-13 15:13:53,887 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:14:59] 2025-10-13 15:13:53,887 | INFO     | job 6842820324 has completed (purged errors)
[2025-10-13 11:14:59] 2025-10-13 15:13:53,887 | INFO     | overall cleanup function is called
[2025-10-13 11:14:59] 2025-10-13 15:13:54,897 | INFO     | --- collectZombieJob: --- 10, [538239]
[2025-10-13 11:14:59] 2025-10-13 15:13:54,897 | INFO     | zombie collector waiting for pid 538239
[2025-10-13 11:14:59] 2025-10-13 15:13:54,897 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:14:59] 2025-10-13 15:13:54,897 | INFO     | collected zombie processes
[2025-10-13 11:14:59] 2025-10-13 15:13:54,898 | INFO     | will attempt to kill all subprocesses of pid=538239
[2025-10-13 11:14:59] 2025-10-13 15:13:55,385 | INFO     | process IDs to be killed: [538239] (in reverse order)
[2025-10-13 11:14:59] 2025-10-13 15:13:55,550 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:14:59] 2025-10-13 15:13:55,554 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:14:59] 2025-10-13 15:13:55,590 | INFO     | did not find any defunct processes belonging to 538239
[2025-10-13 11:14:59] 2025-10-13 15:13:55,625 | INFO     | did not find any defunct processes belonging to 538239
[2025-10-13 11:14:59] 2025-10-13 15:13:55,625 | INFO     | ready for new job
[2025-10-13 11:14:59] 2025-10-13 15:13:55,626 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:14:59] 2025-10-13 15:13:55,629 | INFO     | ***************************************
[2025-10-13 11:14:59] 2025-10-13 15:13:55,630 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:14:59] 2025-10-13 15:13:55,630 | INFO     | ***************************************
[2025-10-13 11:14:59] 2025-10-13 15:13:55,630 | INFO     | 
[2025-10-13 11:14:59] 2025-10-13 15:13:55,650 | INFO     | architecture information:
[2025-10-13 11:14:59] 2025-10-13 15:13:55,651 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:14:59] 2025-10-13 15:13:55,758 | INFO     | cat /etc/os-release:
[2025-10-13 11:14:59] NAME="CentOS Linux"
[2025-10-13 11:14:59] VERSION="7 (Core)"
[2025-10-13 11:14:59] ID="centos"
[2025-10-13 11:14:59] ID_LIKE="rhel fedora"
[2025-10-13 11:14:59] VERSION_ID="7"
[2025-10-13 11:14:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:14:59] ANSI_COLOR="0;31"
[2025-10-13 11:14:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:14:59] HOME_URL="https://www.centos.org/"
[2025-10-13 11:14:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:14:59] 
[2025-10-13 11:14:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:14:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:14:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:14:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:14:59] 
[2025-10-13 11:14:59] 2025-10-13 15:13:55,759 | INFO     | ***************************************
[2025-10-13 11:14:59] 2025-10-13 15:13:56,263 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-13 11:14:59] 2025-10-13 15:13:56,292 | INFO     | sufficient remaining disk space (76533465088 B)
[2025-10-13 11:14:59] 2025-10-13 15:13:56,292 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:14:59] 2025-10-13 15:13:56,293 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:14:59] 2025-10-13 15:13:56,293 | INFO     | update_server=False
[2025-10-13 11:14:59] 2025-10-13 15:13:56,293 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:14:59] 2025-10-13 15:13:56,294 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:14:59] 2025-10-13 15:13:56,327 | INFO     | all data control threads have been joined
[2025-10-13 11:14:59] 2025-10-13 15:13:56,417 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:14:59] 2025-10-13 15:13:56,582 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 11:14:59] 2025-10-13 15:13:56,583 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 11:14:59] 2025-10-13 15:13:56,583 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:14:59] 2025-10-13 15:13:56,583 | INFO     | will abort loop
[2025-10-13 11:14:59] 2025-10-13 15:13:57,288 | INFO     | all job control threads have been joined
[2025-10-13 11:14:59] 2025-10-13 15:13:57,299 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:14:59] 2025-10-13 15:13:57,333 | INFO     | [data] control thread has finished
[2025-10-13 11:14:59] 2025-10-13 15:13:57,589 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:14:59] 2025-10-13 15:13:57,699 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:14:59] 2025-10-13 15:13:57,711 | INFO     | all payload control threads have been joined
[2025-10-13 11:14:59] 2025-10-13 15:13:57,763 | INFO     | [job] validate thread has finished
[2025-10-13 11:14:59] 2025-10-13 15:13:57,808 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:14:59] 2025-10-13 15:13:57,836 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:14:59] 2025-10-13 15:13:58,294 | INFO     | [job] control thread has finished
[2025-10-13 11:14:59] 2025-10-13 15:13:58,301 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:14:59] 2025-10-13 15:13:58,608 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:14:59] 2025-10-13 15:13:58,687 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:14:59] 2025-10-13 15:13:58,698 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:14:59] 2025-10-13 15:13:58,717 | INFO     | [payload] control thread has finished
[2025-10-13 11:14:59] 2025-10-13 15:13:58,867 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:14:59] 2025-10-13 15:13:59,872 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:14:59] 2025-10-13 15:14:00,428 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:14:59] 2025-10-13 15:14:07,212 | INFO     | job.realtimelogging is not enabled
[2025-10-13 11:14:59] 2025-10-13 15:14:08,218 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:14:59] 2025-10-13 15:14:27,252 | INFO     | PID=505812 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 11:14:59] 2025-10-13 15:14:27,252 | INFO     | .. there are 36 such processes running
[2025-10-13 11:14:59] 2025-10-13 15:14:27,254 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:14:59] 2025-10-13 15:14:27,254 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:14:59] 2025-10-13 15:14:27,254 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:14:59] 2025-10-13 15:14:52,299 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:14:59] 2025-10-13 15:14:53,187 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140203749205824)>', '<ExcThread(monitor, started 140203402442496)>']
[2025-10-13 11:14:59] 2025-10-13 15:14:53,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:14:59] 2025-10-13 15:14:53,411 | INFO     | [monitor] control thread has ended
[2025-10-13 11:14:59] 2025-10-13 15:14:58,212 | INFO     | all workflow threads have been joined
[2025-10-13 11:14:59] 2025-10-13 15:14:58,212 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:14:59] 2025-10-13 15:14:58,213 | INFO     | traces error code: 0
[2025-10-13 11:14:59] 2025-10-13 15:14:58,213 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:14:59] 2025-10-13 15:14:58,550 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:14:59] 2025-10-13 15:14:58,592 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:14:59] 2025-10-13 15:14:58,610 [wrapper] pilotpid: 505812
[2025-10-13 11:14:59] 2025-10-13 15:14:58,615 [wrapper] Pilot exit status: 0
[2025-10-13 11:14:59] 2025-10-13 15:14:58,654 [wrapper] pandaids: 6842820324
[2025-10-13 11:14:59] 2025-10-13 15:14:58,822 [wrapper] cleanup supervisor_pilot 1382207 505813
[2025-10-13 11:14:59] 2025-10-13 15:14:58,829 [wrapper] Test setup, not cleaning
[2025-10-13 11:14:59] 2025-10-13 15:14:58,833 [wrapper] apfmon messages muted
[2025-10-13 11:14:59] 2025-10-13 15:14:58,836 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:14:59] 2025-10-13 15:14:58,840 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:14:59]  *** Error codes and diagnostics ***
[2025-10-13 11:14:59]     "exeErrorCode": 0,
[2025-10-13 11:14:59]     "exeErrorDiag": "",
[2025-10-13 11:14:59]     "pilotErrorCode": 0,
[2025-10-13 11:14:59]     "pilotErrorDiag": "",
[2025-10-13 11:14:59]  *** Listing of results directory ***
[2025-10-13 11:14:59] total 419940
[2025-10-13 11:14:59] -rw-r--r--. 1 boincer umatlas    557409 Oct 13 06:28 pilot3.tar.gz
[2025-10-13 11:14:59] -rw-r--r--. 1 boincer umatlas      5112 Oct 13 06:35 queuedata.json
[2025-10-13 11:14:59] -rwx------. 1 boincer umatlas     36292 Oct 13 06:36 runpilot2-wrapper.sh
[2025-10-13 11:14:59] -rw-r--r--. 1 boincer umatlas       100 Oct 13 06:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:14:59] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 06:45 run_atlas
[2025-10-13 11:14:59] -rw-r--r--. 1 boincer umatlas       105 Oct 13 06:45 job.xml
[2025-10-13 11:14:59] -rw-r--r--. 2 boincer umatlas 220117034 Oct 13 06:45 EVNT.46676267._001752.pool.root.1
[2025-10-13 11:14:59] -rw-r--r--. 2 boincer umatlas    569688 Oct 13 06:45 input.tar.gz
[2025-10-13 11:14:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:45 start_atlas.sh
[2025-10-13 11:14:59] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 06:45 shared
[2025-10-13 11:14:59] -rw-r--r--. 1 boincer umatlas         0 Oct 13 06:45 boinc_lockfile
[2025-10-13 11:14:59] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 06:45 pandaJob.out
[2025-10-13 11:14:59] -rw-------. 1 boincer umatlas    972497 Oct 13 06:47 agis_schedconf.cvmfs.json
[2025-10-13 11:14:59] drwx------. 5 boincer umatlas      4096 Oct 13 06:47 pilot3
[2025-10-13 11:14:59] -rw-r--r--. 1 boincer umatlas      6856 Oct 13 11:10 init_data.xml
[2025-10-13 11:14:59] -rw-------. 1 boincer umatlas 201052849 Oct 13 11:12 HITS.46676269._096677.pool.root.1
[2025-10-13 11:14:59] -rw-r--r--. 1 boincer umatlas       531 Oct 13 11:13 boinc_task_state.xml
[2025-10-13 11:14:59] -rw-------. 1 boincer umatlas      1044 Oct 13 11:13 memory_monitor_summary.json
[2025-10-13 11:14:59] -rw-------. 1 boincer umatlas   1560580 Oct 13 11:13 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:14:59] -rw-------. 1 boincer umatlas    467894 Oct 13 11:13 log.46676269._096677.job.log.tgz.1
[2025-10-13 11:14:59] -rw-------. 1 boincer umatlas      7834 Oct 13 11:13 heartbeat.json
[2025-10-13 11:14:59] -rw-------. 1 boincer umatlas        95 Oct 13 11:14 pilot_heartbeat.json
[2025-10-13 11:14:59] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 11:14 boinc_mmap_file
[2025-10-13 11:14:59] -rw-r--r--. 1 boincer umatlas        28 Oct 13 11:14 wrapper_checkpoint.txt
[2025-10-13 11:14:59] -rw-------. 1 boincer umatlas      5081 Oct 13 11:14 pilotlog.txt
[2025-10-13 11:14:59] -rw-------. 1 boincer umatlas   2004186 Oct 13 11:14 log.46676269._096677.job.log.1
[2025-10-13 11:14:59] -rw-------. 1 boincer umatlas       357 Oct 13 11:14 output.list
[2025-10-13 11:14:59] -rw-r--r--. 1 boincer umatlas       620 Oct 13 11:14 runtime_log
[2025-10-13 11:14:59] -rw-------. 1 boincer umatlas   2488320 Oct 13 11:14 result.tar.gz
[2025-10-13 11:14:59] -rw-r--r--. 1 boincer umatlas      8709 Oct 13 11:14 runtime_log.err
[2025-10-13 11:14:59] -rw-------. 1 boincer umatlas       656 Oct 13 11:14 lKOLDmd5US8n9Rq4apOajLDm4fhM0noT9bVof3QYDmpjVMDmC7bJcn.diag
[2025-10-13 11:14:59] -rw-r--r--. 1 boincer umatlas     21172 Oct 13 11:14 stderr.txt
[2025-10-13 11:14:59] HITS file was successfully produced:
[2025-10-13 11:14:59] -rw-------. 1 boincer umatlas 201052849 Oct 13 11:12 shared/HITS.pool.root.1
[2025-10-13 11:14:59]  *** Contents of shared directory: ***
[2025-10-13 11:14:59] total 414320
[2025-10-13 11:14:59] -rw-r--r--. 2 boincer umatlas 220117034 Oct 13 06:45 ATLAS.root_0
[2025-10-13 11:14:59] -rw-r--r--. 2 boincer umatlas    569688 Oct 13 06:45 input.tar.gz
[2025-10-13 11:14:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:45 start_atlas.sh
[2025-10-13 11:14:59] -rw-------. 1 boincer umatlas 201052849 Oct 13 11:12 HITS.pool.root.1
[2025-10-13 11:14:59] -rw-------. 1 boincer umatlas   2488320 Oct 13 11:14 result.tar.gz
11:15:01 (500572): run_atlas exited; CPU time 52358.074881
11:15:01 (500572): called boinc_finish(0)

</stderr_txt>
]]>

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