Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:17:13 (28102): wrapper (7.7.26015): starting
14:17:13 (28102): wrapper: running run_atlas (--nthreads 8)
[2025-10-14 14:17:13] Arguments: --nthreads 8
[2025-10-14 14:17:13] Threads: 8
[2025-10-14 14:17:13] Checking for CVMFS
[2025-10-14 14:17:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 14:17:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 14:17:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 14:17:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 14:17:16] 2.11.2.0 31038 223443 136680 151697 1 17 17165158 25165825 4632 130560 0 118265278 99.897 60771065 3272 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-14 14:17:16] CVMFS is ok
[2025-10-14 14:17:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 14:17:16] Checking for apptainer binary...
[2025-10-14 14:17:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 14:17:16] Running /usr/bin/apptainer --version
[2025-10-14 14:17:16] apptainer version 1.3.2-1.el7
[2025-10-14 14:17:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 14:17:21] cg-vwn486.simple-grid.lan
[2025-10-14 14:17:21] apptainer works
[2025-10-14 14:17:21] Set ATHENA_PROC_NUMBER=8
[2025-10-14 14:17:21] Set ATHENA_CORE_NUMBER=8
[2025-10-14 14:17:21] Starting ATLAS job with PandaID=6841993301
[2025-10-14 14:17:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 17:49:29]  *** The last 200 lines of the pilot log: ***
[2025-10-14 17:49:29] 2025-10-14 15:48:14,673 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 17:49:29] 2025-10-14 15:48:14,675 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-10-14 17:49:29] 2025-10-14 15:48:14,677 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6841993301/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 17:49:29] 2025-10-14 15:48:14,677 | INFO     | extracted standard info from prmon json
[2025-10-14 17:49:29] 2025-10-14 15:48:14,677 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 17:49:29] 2025-10-14 15:48:14,677 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 17:49:29] 2025-10-14 15:48:14,678 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 17:49:29] 2025-10-14 15:48:14,678 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 17:49:29] 2025-10-14 15:48:14,681 | INFO     | fitting pss+swap vs Time
[2025-10-14 17:49:29] 2025-10-14 15:48:14,682 | INFO     | sum of square deviations: 2299168690.0
[2025-10-14 17:49:29] 2025-10-14 15:48:14,683 | INFO     | sum of deviations: 4837470250.999983
[2025-10-14 17:49:29] 2025-10-14 15:48:14,683 | INFO     | mean x: 1760450855.0
[2025-10-14 17:49:29] 2025-10-14 15:48:14,683 | INFO     | mean y: 2485408.235897436
[2025-10-14 17:49:29] 2025-10-14 15:48:14,684 | INFO     | -- intersect: -3701517989.3616858
[2025-10-14 17:49:29] 2025-10-14 15:48:14,684 | INFO     | intersect: -3701517989.3616858
[2025-10-14 17:49:29] 2025-10-14 15:48:14,684 | INFO     | chi2: 4.9707562533084255
[2025-10-14 17:49:29] 2025-10-14 15:48:14,687 | INFO     | sum of square deviations: 2126802667.5
[2025-10-14 17:49:29] 2025-10-14 15:48:14,689 | INFO     | sum of deviations: 17805269961.50002
[2025-10-14 17:49:29] 2025-10-14 15:48:14,689 | INFO     | mean x: 1760450702.5
[2025-10-14 17:49:29] 2025-10-14 15:48:14,689 | INFO     | mean y: 2496645.7
[2025-10-14 17:49:29] 2025-10-14 15:48:14,689 | INFO     | -- intersect: -14735730125.837023
[2025-10-14 17:49:29] 2025-10-14 15:48:14,689 | INFO     | intersect: -14735730125.837023
[2025-10-14 17:49:29] 2025-10-14 15:48:14,689 | INFO     | chi2: 4.2505126731460985
[2025-10-14 17:49:29] 2025-10-14 15:48:14,690 | INFO     | current chi2=4.2505126731460985 (change=14.489617745447664 %)
[2025-10-14 17:49:29] 2025-10-14 15:48:14,690 | INFO     | right removable region: 189
[2025-10-14 17:49:29] 2025-10-14 15:48:14,690 | INFO     | sum of square deviations: 2126802667.5
[2025-10-14 17:49:29] 2025-10-14 15:48:14,691 | INFO     | sum of deviations: -56204380445.999985
[2025-10-14 17:49:29] 2025-10-14 15:48:14,691 | INFO     | mean x: 1760451007.5
[2025-10-14 17:49:29] 2025-10-14 15:48:14,691 | INFO     | mean y: 2539250.5368421054
[2025-10-14 17:49:29] 2025-10-14 15:48:14,691 | INFO     | -- intersect: 46525453526.538414
[2025-10-14 17:49:29] 2025-10-14 15:48:14,692 | INFO     | intersect: 46525453526.538414
[2025-10-14 17:49:29] 2025-10-14 15:48:14,692 | INFO     | chi2: 1.0424214597066803
[2025-10-14 17:49:29] 2025-10-14 15:48:14,692 | INFO     | current chi2=1.0424214597066803 (change=79.02891619332839 %)
[2025-10-14 17:49:29] 2025-10-14 15:48:14,692 | INFO     | sum of square deviations: 1963274020.0
[2025-10-14 17:49:29] 2025-10-14 15:48:14,693 | INFO     | sum of deviations: -57173114431.0
[2025-10-14 17:49:29] 2025-10-14 15:48:14,693 | INFO     | mean x: 1760451160.0
[2025-10-14 17:49:29] 2025-10-14 15:48:14,694 | INFO     | mean y: 2540061.8054054054
[2025-10-14 17:49:29] 2025-10-14 15:48:14,694 | INFO     | -- intersect: 51269186793.50651
[2025-10-14 17:49:29] 2025-10-14 15:48:14,694 | INFO     | intersect: 51269186793.50651
[2025-10-14 17:49:29] 2025-10-14 15:48:14,694 | INFO     | chi2: 0.9793349691855815
[2025-10-14 17:49:29] 2025-10-14 15:48:14,694 | INFO     | current chi2=0.9793349691855815 (change=6.05191786236349 %)
[2025-10-14 17:49:29] 2025-10-14 15:48:14,694 | INFO     | left removable region: 20
[2025-10-14 17:49:29] 2025-10-14 15:48:14,698 | INFO     | sum of square deviations: 1496660620.0
[2025-10-14 17:49:29] 2025-10-14 15:48:14,699 | INFO     | sum of deviations: -31674717138.0
[2025-10-14 17:49:29] 2025-10-14 15:48:14,699 | INFO     | mean x: 1760451282.0
[2025-10-14 17:49:29] 2025-10-14 15:48:14,699 | INFO     | mean y: 2541416.828402367
[2025-10-14 17:49:29] 2025-10-14 15:48:14,699 | INFO     | -- intersect: 37260016924.25471
[2025-10-14 17:49:29] 2025-10-14 15:48:14,699 | INFO     | intersect: 37260016924.25471
[2025-10-14 17:49:29] 2025-10-14 15:48:14,699 | INFO     | chi2: 0.17392224183790184
[2025-10-14 17:49:29] 2025-10-14 15:48:14,700 | INFO     | -- intersect: 37260016924.25471
[2025-10-14 17:49:29] 2025-10-14 15:48:14,700 | INFO     | current memory leak: -21.16 B/s (using 169 data points, chi2=0.17)
[2025-10-14 17:49:29] 2025-10-14 15:48:14,700 | INFO     | could have reported an average CPU frequency of 2249 MHz (10 samples)
[2025-10-14 17:49:29] 2025-10-14 15:48:14,700 | INFO     | ..............................
[2025-10-14 17:49:29] 2025-10-14 15:48:14,700 | INFO     | . Timing measurements:
[2025-10-14 17:49:29] 2025-10-14 15:48:14,701 | INFO     | . get job = 0 s
[2025-10-14 17:49:29] 2025-10-14 15:48:14,701 | INFO     | . initial setup = 6 s
[2025-10-14 17:49:29] 2025-10-14 15:48:14,701 | INFO     | . payload setup = 139 s
[2025-10-14 17:49:29] 2025-10-14 15:48:14,701 | INFO     | . stage-in = 0 s
[2025-10-14 17:49:29] 2025-10-14 15:48:14,701 | INFO     | . payload execution = 12006 s
[2025-10-14 17:49:29] 2025-10-14 15:48:14,701 | INFO     | . stage-out = 3 s
[2025-10-14 17:49:29] 2025-10-14 15:48:14,701 | INFO     | . log creation = 1 s
[2025-10-14 17:49:29] 2025-10-14 15:48:14,701 | INFO     | ..............................
[2025-10-14 17:49:29] 2025-10-14 15:48:15,030 | INFO     | 
[2025-10-14 17:49:29] 2025-10-14 15:48:15,031 | INFO     | job summary report
[2025-10-14 17:49:29] 2025-10-14 15:48:15,031 | INFO     | --------------------------------------------------
[2025-10-14 17:49:29] 2025-10-14 15:48:15,031 | INFO     | PanDA job id: 6841993301
[2025-10-14 17:49:29] 2025-10-14 15:48:15,031 | INFO     | task id: 46676269
[2025-10-14 17:49:29] 2025-10-14 15:48:15,031 | INFO     | errors: (none)
[2025-10-14 17:49:29] 2025-10-14 15:48:15,031 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 17:49:29] 2025-10-14 15:48:15,031 | INFO     | pilot state: finished 
[2025-10-14 17:49:29] 2025-10-14 15:48:15,031 | INFO     | transexitcode: 0
[2025-10-14 17:49:29] 2025-10-14 15:48:15,031 | INFO     | exeerrorcode: 0
[2025-10-14 17:49:29] 2025-10-14 15:48:15,031 | INFO     | exeerrordiag: 
[2025-10-14 17:49:29] 2025-10-14 15:48:15,031 | INFO     | exitcode: 0
[2025-10-14 17:49:29] 2025-10-14 15:48:15,032 | INFO     | exitmsg: OK
[2025-10-14 17:49:29] 2025-10-14 15:48:15,032 | INFO     | cpuconsumptiontime: 45115 s
[2025-10-14 17:49:29] 2025-10-14 15:48:15,032 | INFO     | nevents: 400
[2025-10-14 17:49:29] 2025-10-14 15:48:15,032 | INFO     | neventsw: 0
[2025-10-14 17:49:29] 2025-10-14 15:48:15,032 | INFO     | pid: 6057
[2025-10-14 17:49:29] 2025-10-14 15:48:15,032 | INFO     | pgrp: 6057
[2025-10-14 17:49:29] 2025-10-14 15:48:15,032 | INFO     | corecount: 8
[2025-10-14 17:49:29] 2025-10-14 15:48:15,032 | INFO     | event service: False
[2025-10-14 17:49:29] 2025-10-14 15:48:15,032 | INFO     | sizes: {0: 2348808, 1: 2348808, 12: 2348836, 22: 2348864, 33: 2348892, 44: 2348948, 54: 2349104, 65: 2349132, 76: 2349160, 87: 2349216, 88: 2349506, 97: 2349814, 1
[2025-10-14 17:49:29] 2025-10-14 15:48:15,032 | INFO     | --------------------------------------------------
[2025-10-14 17:49:29] 2025-10-14 15:48:15,032 | INFO     | 
[2025-10-14 17:49:29] 2025-10-14 15:48:15,032 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-10-14 17:49:29] 2025-10-14 15:48:15,101 | INFO     | time since job start (12439s) is within the limit (172800.0s)
[2025-10-14 17:49:29] 2025-10-14 15:48:15,662 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 17:49:29] 2025-10-14 15:48:15,662 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 17:49:29] 2025-10-14 15:48:15,662 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 17:49:29] 2025-10-14 15:48:15,662 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 17:49:29] 2025-10-14 15:48:15,662 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 17:49:29] 2025-10-14 15:48:15,662 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 17:49:29] 2025-10-14 15:48:15,663 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 17:49:29] 2025-10-14 15:48:15,663 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 17:49:29] 2025-10-14 15:48:15,663 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 17:49:29] 2025-10-14 15:48:15,663 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 17:49:29] 2025-10-14 15:48:15,663 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 17:49:29] 2025-10-14 15:48:15,663 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 17:49:29] 2025-10-14 15:48:15,663 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 17:49:29] 2025-10-14 15:48:15,663 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 17:49:29] 2025-10-14 15:48:15,663 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 17:49:29] 2025-10-14 15:48:15,663 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 17:49:29] 2025-10-14 15:48:15,663 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 17:49:29] 2025-10-14 15:48:15,664 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 17:49:29] 2025-10-14 15:48:15,664 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 17:49:29] 2025-10-14 15:48:15,664 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 17:49:29] 2025-10-14 15:48:15,664 | INFO     | job 6841993301 has completed (purged errors)
[2025-10-14 17:49:29] 2025-10-14 15:48:15,664 | INFO     | overall cleanup function is called
[2025-10-14 17:49:29] 2025-10-14 15:48:16,672 | INFO     | --- collectZombieJob: --- 10, [6057]
[2025-10-14 17:49:29] 2025-10-14 15:48:16,673 | INFO     | zombie collector waiting for pid 6057
[2025-10-14 17:49:29] 2025-10-14 15:48:16,673 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 17:49:29] 2025-10-14 15:48:16,673 | INFO     | collected zombie processes
[2025-10-14 17:49:29] 2025-10-14 15:48:16,673 | INFO     | will attempt to kill all subprocesses of pid=6057
[2025-10-14 17:49:29] 2025-10-14 15:48:16,785 | INFO     | process IDs to be killed: [6057] (in reverse order)
[2025-10-14 17:49:29] 2025-10-14 15:48:17,410 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 17:49:29] 2025-10-14 15:48:17,410 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 17:49:29] 2025-10-14 15:48:17,413 | INFO     | did not find any defunct processes belonging to 6057
[2025-10-14 17:49:29] 2025-10-14 15:48:17,415 | INFO     | did not find any defunct processes belonging to 6057
[2025-10-14 17:49:29] 2025-10-14 15:48:17,415 | INFO     | ready for new job
[2025-10-14 17:49:29] 2025-10-14 15:48:17,415 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 17:49:29] 2025-10-14 15:48:17,417 | INFO     | ***************************************
[2025-10-14 17:49:29] 2025-10-14 15:48:17,417 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 17:49:29] 2025-10-14 15:48:17,417 | INFO     | ***************************************
[2025-10-14 17:49:29] 2025-10-14 15:48:17,417 | INFO     | 
[2025-10-14 17:49:29] 2025-10-14 15:48:17,418 | INFO     | pilot is running in a VM
[2025-10-14 17:49:29] 2025-10-14 15:48:17,418 | INFO     | architecture information:
[2025-10-14 17:49:29] 2025-10-14 15:48:17,418 | INFO     | executing command: cat /etc/os-release
[2025-10-14 17:49:29] 2025-10-14 15:48:17,617 | INFO     | cat /etc/os-release:
[2025-10-14 17:49:29] NAME="CentOS Linux"
[2025-10-14 17:49:29] VERSION="7 (Core)"
[2025-10-14 17:49:29] ID="centos"
[2025-10-14 17:49:29] ID_LIKE="rhel fedora"
[2025-10-14 17:49:29] VERSION_ID="7"
[2025-10-14 17:49:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 17:49:29] ANSI_COLOR="0;31"
[2025-10-14 17:49:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 17:49:29] HOME_URL="https://www.centos.org/"
[2025-10-14 17:49:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 17:49:29] 
[2025-10-14 17:49:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 17:49:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 17:49:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 17:49:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 17:49:29] 
[2025-10-14 17:49:29] 2025-10-14 15:48:17,617 | INFO     | ***************************************
[2025-10-14 17:49:29] 2025-10-14 15:48:18,119 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-10-14 17:49:29] 2025-10-14 15:48:18,376 | INFO     | sufficient remaining disk space (496623419392 B)
[2025-10-14 17:49:29] 2025-10-14 15:48:18,376 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 17:49:29] 2025-10-14 15:48:18,376 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 17:49:29] 2025-10-14 15:48:18,376 | INFO     | update_server=False
[2025-10-14 17:49:29] 2025-10-14 15:48:18,376 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 17:49:29] 2025-10-14 15:48:18,377 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 17:49:29] 2025-10-14 15:48:18,901 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 17:49:29] 2025-10-14 15:48:18,902 | INFO     | aborting loop
[2025-10-14 17:49:29] 2025-10-14 15:48:18,904 | INFO     | all payload control threads have been joined
[2025-10-14 17:49:29] 2025-10-14 15:48:18,998 | INFO     | all data control threads have been joined
[2025-10-14 17:49:29] 2025-10-14 15:48:19,382 | INFO     | [job] retrieve thread has finished
[2025-10-14 17:49:29] 2025-10-14 15:48:19,390 | INFO     | [data] copytool_in thread has finished
[2025-10-14 17:49:29] 2025-10-14 15:48:19,688 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 17:49:29] 2025-10-14 15:48:19,763 | INFO     | [job] validate thread has finished
[2025-10-14 17:49:29] 2025-10-14 15:48:19,844 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 17:49:29] 2025-10-14 15:48:19,898 | INFO     | all job control threads have been joined
[2025-10-14 17:49:29] 2025-10-14 15:48:19,907 | INFO     | [job] job monitor thread has finished
[2025-10-14 17:49:29] 2025-10-14 15:48:19,910 | INFO     | [payload] control thread has finished
[2025-10-14 17:49:29] 2025-10-14 15:48:20,004 | INFO     | [data] control thread has finished
[2025-10-14 17:49:29] 2025-10-14 15:48:20,078 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 17:49:29] 2025-10-14 15:48:20,297 | INFO     | [payload] validate_post thread has finished
[2025-10-14 17:49:29] 2025-10-14 15:48:20,384 | INFO     | [data] copytool_out thread has finished
[2025-10-14 17:49:29] 2025-10-14 15:48:20,506 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 17:49:29] 2025-10-14 15:48:20,748 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 17:49:29] 2025-10-14 15:48:20,775 | INFO     | [payload] failed_post thread has finished
[2025-10-14 17:49:29] 2025-10-14 15:48:20,849 | INFO     | [job] queue monitor thread has finished
[2025-10-14 17:49:29] 2025-10-14 15:48:20,904 | INFO     | [job] control thread has finished
[2025-10-14 17:49:29] 2025-10-14 15:48:24,756 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 17:49:29] 2025-10-14 15:48:28,681 | INFO     | job.realtimelogging is not enabled
[2025-10-14 17:49:29] 2025-10-14 15:48:29,687 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 17:49:29] 2025-10-14 15:48:48,265 | INFO     | PID=31902 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-14 17:49:29] 2025-10-14 15:48:48,265 | INFO     | .. there are 9 such processes running
[2025-10-14 17:49:29] 2025-10-14 15:48:48,266 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 17:49:29] 2025-10-14 15:48:48,266 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 17:49:29] 2025-10-14 15:48:48,266 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 17:49:29] 2025-10-14 15:49:17,952 | INFO     | [monitor] cgroup control has ended
[2025-10-14 17:49:29] 2025-10-14 15:49:19,998 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140690088212288)>', '<ExcThread(monitor, started 140689790703360)>']
[2025-10-14 17:49:29] 2025-10-14 15:49:20,456 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 17:49:29] 2025-10-14 15:49:20,457 | INFO     | [monitor] control thread has ended
[2025-10-14 17:49:29] 2025-10-14 15:49:25,024 | INFO     | all workflow threads have been joined
[2025-10-14 17:49:29] 2025-10-14 15:49:25,025 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 17:49:29] 2025-10-14 15:49:25,025 | INFO     | traces error code: 0
[2025-10-14 17:49:29] 2025-10-14 15:49:25,025 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 17:49:29] 2025-10-14 15:49:25,514 [wrapper] ==== pilot stdout END ====
[2025-10-14 17:49:29] 2025-10-14 15:49:25,615 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 17:49:29] 2025-10-14 15:49:25,726 [wrapper] pilotpid: 31902
[2025-10-14 17:49:29] 2025-10-14 15:49:25,842 [wrapper] Pilot exit status: 0
[2025-10-14 17:49:29] 2025-10-14 15:49:26,329 [wrapper] pandaids: 6841993301
[2025-10-14 17:49:29] 2025-10-14 15:49:27,504 [wrapper] cleanup supervisor_pilot 11504 31903
[2025-10-14 17:49:29] 2025-10-14 15:49:27,627 [wrapper] Test setup, not cleaning
[2025-10-14 17:49:29] 2025-10-14 15:49:27,726 [wrapper] apfmon messages muted
[2025-10-14 17:49:29] 2025-10-14 15:49:27,821 [wrapper] ==== wrapper stdout END ====
[2025-10-14 17:49:29] 2025-10-14 15:49:27,903 [wrapper] ==== wrapper stderr END ====
[2025-10-14 17:49:29]  *** Error codes and diagnostics ***
[2025-10-14 17:49:29]     "exeErrorCode": 0,
[2025-10-14 17:49:29]     "exeErrorDiag": "",
[2025-10-14 17:49:29]     "pilotErrorCode": 0,
[2025-10-14 17:49:29]     "pilotErrorDiag": "",
[2025-10-14 17:49:29]  *** Listing of results directory ***
[2025-10-14 17:49:29] total 411012
[2025-10-14 17:49:29] -rw-r--r--. 1 boinc boinc    557409 Oct 13 05:15 pilot3.tar.gz
[2025-10-14 17:49:29] -rw-r--r--. 1 boinc boinc      5112 Oct 13 05:17 queuedata.json
[2025-10-14 17:49:29] -rwx------. 1 boinc boinc     36292 Oct 13 05:19 runpilot2-wrapper.sh
[2025-10-14 17:49:29] -rw-r--r--. 1 boinc boinc       100 Oct 14 14:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 17:49:29] -rwxr-xr-x. 1 boinc boinc      7986 Oct 14 14:17 run_atlas
[2025-10-14 17:49:29] -rw-r--r--. 1 boinc boinc       105 Oct 14 14:17 job.xml
[2025-10-14 17:49:29] -rw-r--r--. 2 boinc boinc 219906074 Oct 14 14:17 EVNT.46676267._001526.pool.root.1
[2025-10-14 17:49:29] -rw-r--r--. 2 boinc boinc     15120 Oct 14 14:17 start_atlas.sh
[2025-10-14 17:49:29] drwxrwx--x. 2 boinc boinc        68 Oct 14 14:17 shared
[2025-10-14 17:49:29] -rw-r--r--. 2 boinc boinc    569681 Oct 14 14:17 input.tar.gz
[2025-10-14 17:49:29] -rw-r--r--. 1 boinc boinc      6388 Oct 14 14:17 init_data.xml
[2025-10-14 17:49:29] -rw-r--r--. 1 boinc boinc         0 Oct 14 14:17 boinc_lockfile
[2025-10-14 17:49:29] -rw-r--r--. 1 boinc boinc      2550 Oct 14 14:17 pandaJob.out
[2025-10-14 17:49:29] -rw-------. 1 boinc boinc    973969 Oct 14 14:20 agis_schedconf.cvmfs.json
[2025-10-14 17:49:29] drwx------. 5 boinc boinc      4096 Oct 14 14:20 pilot3
[2025-10-14 17:49:29] -rw-------. 1 boinc boinc 192864643 Oct 14 17:45 HITS.46676269._095689.pool.root.1
[2025-10-14 17:49:29] -rw-r--r--. 1 boinc boinc       531 Oct 14 17:45 boinc_task_state.xml
[2025-10-14 17:49:29] -rw-------. 1 boinc boinc      1016 Oct 14 17:46 memory_monitor_summary.json
[2025-10-14 17:49:29] -rw-------. 1 boinc boinc   1560740 Oct 14 17:46 agis_ddmendpoints.agis.ALL.json
[2025-10-14 17:49:29] -rw-------. 1 boinc boinc    432341 Oct 14 17:46 log.46676269._095689.job.log.tgz.1
[2025-10-14 17:49:29] -rw-------. 1 boinc boinc      7784 Oct 14 17:48 heartbeat.json
[2025-10-14 17:49:29] -rw-------. 1 boinc boinc        95 Oct 14 17:48 pilot_heartbeat.json
[2025-10-14 17:49:29] -rw-r--r--. 1 boinc boinc        28 Oct 14 17:49 wrapper_checkpoint.txt
[2025-10-14 17:49:29] -rw-r--r--. 1 boinc boinc      8192 Oct 14 17:49 boinc_mmap_file
[2025-10-14 17:49:29] -rw-------. 1 boinc boinc      4957 Oct 14 17:49 pilotlog.txt
[2025-10-14 17:49:29] -rw-------. 1 boinc boinc   1674050 Oct 14 17:49 log.46676269._095689.job.log.1
[2025-10-14 17:49:29] -rw-------. 1 boinc boinc       357 Oct 14 17:49 output.list
[2025-10-14 17:49:29] -rw-r--r--. 1 boinc boinc       620 Oct 14 17:49 runtime_log
[2025-10-14 17:49:29] -rw-------. 1 boinc boinc   2129920 Oct 14 17:49 result.tar.gz
[2025-10-14 17:49:29] -rw-r--r--. 1 boinc boinc      8717 Oct 14 17:49 runtime_log.err
[2025-10-14 17:49:29] -rw-------. 1 boinc boinc       657 Oct 14 17:49 hTrLDm1GOS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIcmNDmgtZAYo.diag
[2025-10-14 17:49:29] -rw-r--r--. 1 boinc boinc     20760 Oct 14 17:49 stderr.txt
[2025-10-14 17:49:29] HITS file was successfully produced:
[2025-10-14 17:49:29] -rw-------. 1 boinc boinc 192864643 Oct 14 17:45 shared/HITS.pool.root.1
[2025-10-14 17:49:29]  *** Contents of shared directory: ***
[2025-10-14 17:49:29] total 405760
[2025-10-14 17:49:29] -rw-r--r--. 2 boinc boinc 219906074 Oct 14 14:17 ATLAS.root_0
[2025-10-14 17:49:29] -rw-r--r--. 2 boinc boinc     15120 Oct 14 14:17 start_atlas.sh
[2025-10-14 17:49:29] -rw-r--r--. 2 boinc boinc    569681 Oct 14 14:17 input.tar.gz
[2025-10-14 17:49:29] -rw-------. 1 boinc boinc 192864643 Oct 14 17:45 HITS.pool.root.1
[2025-10-14 17:49:29] -rw-------. 1 boinc boinc   2129920 Oct 14 17:49 result.tar.gz
17:49:31 (28102): run_atlas exited; CPU time 45237.776067
17:49:31 (28102): called boinc_finish(0)

</stderr_txt>
]]>

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