Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:25:13 (31058): wrapper (7.7.26015): starting
06:25:13 (31058): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 06:25:13] Arguments: --nthreads 8
[2025-10-13 06:25:13] Threads: 8
[2025-10-13 06:25:13] Checking for CVMFS
[2025-10-13 06:25:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:25:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:25:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:25:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:25:14] 2.11.2.0 2822 9816 74864 151658 0 56 15927402 20275200 1 130560 0 6141035 99.989 329387 36951 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 06:25:14] CVMFS is ok
[2025-10-13 06:25:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:25:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:25:14] Further information can be found at the LHC@home message board.
[2025-10-13 06:25:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:25:14] Checking for apptainer binary...
[2025-10-13 06:25:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:25:14] Running /usr/bin/apptainer --version
[2025-10-13 06:25:14] apptainer version 1.3.2-1.el7
[2025-10-13 06:25:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:25:16] c-204-37.aglt2.org
[2025-10-13 06:25:16] apptainer works
[2025-10-13 06:25:16] Set ATHENA_PROC_NUMBER=8
[2025-10-13 06:25:16] Set ATHENA_CORE_NUMBER=8
[2025-10-13 06:25:16] Starting ATLAS job with PandaID=6831456723
[2025-10-13 06:25:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:15:49]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:15:49] 2025-10-13 12:15:05,644 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 08:15:49] 2025-10-13 12:15:05,645 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:15:49] 2025-10-13 12:15:05,645 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:15:49] 2025-10-13 12:15:05,648 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:15:49] 2025-10-13 12:15:05,648 | INFO     | sum of square deviations: 390582207.0
[2025-10-13 08:15:49] 2025-10-13 12:15:05,649 | INFO     | sum of deviations: -10220219929.0
[2025-10-13 08:15:49] 2025-10-13 12:15:05,649 | INFO     | mean x: 1760354427.5
[2025-10-13 08:15:49] 2025-10-13 12:15:05,649 | INFO     | mean y: 2557541.5
[2025-10-13 08:15:49] 2025-10-13 12:15:05,649 | INFO     | -- intersect: 46065099765.905235
[2025-10-13 08:15:49] 2025-10-13 12:15:05,649 | INFO     | intersect: 46065099765.905235
[2025-10-13 08:15:49] 2025-10-13 12:15:05,650 | INFO     | chi2: 2.3257804179913277
[2025-10-13 08:15:49] 2025-10-13 12:15:05,650 | INFO     | sum of square deviations: 338804492.0
[2025-10-13 08:15:49] 2025-10-13 12:15:05,650 | INFO     | sum of deviations: -2091929242.0000014
[2025-10-13 08:15:49] 2025-10-13 12:15:05,650 | INFO     | mean x: 1760354275.0
[2025-10-13 08:15:49] 2025-10-13 12:15:05,651 | INFO     | mean y: 2580697.0873786407
[2025-10-13 08:15:49] 2025-10-13 12:15:05,651 | INFO     | -- intersect: 10871788960.572304
[2025-10-13 08:15:49] 2025-10-13 12:15:05,651 | INFO     | intersect: 10871788960.572304
[2025-10-13 08:15:49] 2025-10-13 12:15:05,651 | INFO     | chi2: 1.5692071627460467
[2025-10-13 08:15:49] 2025-10-13 12:15:05,651 | INFO     | current chi2=1.5692071627460467 (change=32.52986607818718 %)
[2025-10-13 08:15:49] 2025-10-13 12:15:05,651 | INFO     | sum of square deviations: 291817564.5
[2025-10-13 08:15:49] 2025-10-13 12:15:05,652 | INFO     | sum of deviations: -1238424165.5000007
[2025-10-13 08:15:49] 2025-10-13 12:15:05,652 | INFO     | mean x: 1760354122.5
[2025-10-13 08:15:49] 2025-10-13 12:15:05,652 | INFO     | mean y: 2583469.173469388
[2025-10-13 08:15:49] 2025-10-13 12:15:05,652 | INFO     | -- intersect: 7473227290.346025
[2025-10-13 08:15:49] 2025-10-13 12:15:05,652 | INFO     | intersect: 7473227290.346025
[2025-10-13 08:15:49] 2025-10-13 12:15:05,653 | INFO     | chi2: 1.5719928987049083
[2025-10-13 08:15:49] 2025-10-13 12:15:05,653 | INFO     | current chi2=1.5719928987049083 (change=-0.17752506010657937 %)
[2025-10-13 08:15:49] 2025-10-13 12:15:05,653 | INFO     | right removable region: 97
[2025-10-13 08:15:49] 2025-10-13 12:15:05,653 | INFO     | sum of square deviations: 338804492.0
[2025-10-13 08:15:49] 2025-10-13 12:15:05,654 | INFO     | sum of deviations: -26040816673.999992
[2025-10-13 08:15:49] 2025-10-13 12:15:05,654 | INFO     | mean x: 1760354580.0
[2025-10-13 08:15:49] 2025-10-13 12:15:05,654 | INFO     | mean y: 2603138.796116505
[2025-10-13 08:15:49] 2025-10-13 12:15:05,654 | INFO     | -- intersect: 135305032656.21896
[2025-10-13 08:15:49] 2025-10-13 12:15:05,654 | INFO     | intersect: 135305032656.21896
[2025-10-13 08:15:49] 2025-10-13 12:15:05,654 | INFO     | chi2: 0.9045962063989307
[2025-10-13 08:15:49] 2025-10-13 12:15:05,655 | INFO     | current chi2=0.9045962063989307 (change=61.10569168949363 %)
[2025-10-13 08:15:49] 2025-10-13 12:15:05,655 | INFO     | sum of square deviations: 291817564.5
[2025-10-13 08:15:49] 2025-10-13 12:15:05,655 | INFO     | sum of deviations: -24790728668.0
[2025-10-13 08:15:49] 2025-10-13 12:15:05,655 | INFO     | mean x: 1760354732.5
[2025-10-13 08:15:49] 2025-10-13 12:15:05,655 | INFO     | mean y: 2598939.4693877553
[2025-10-13 08:15:49] 2025-10-13 12:15:05,656 | INFO     | -- intersect: 149549719612.65704
[2025-10-13 08:15:49] 2025-10-13 12:15:05,656 | INFO     | intersect: 149549719612.65704
[2025-10-13 08:15:49] 2025-10-13 12:15:05,656 | INFO     | chi2: 0.8873346704790749
[2025-10-13 08:15:49] 2025-10-13 12:15:05,656 | INFO     | current chi2=0.8873346704790749 (change=1.9082034390318223 %)
[2025-10-13 08:15:49] 2025-10-13 12:15:05,656 | INFO     | left removable region: 20
[2025-10-13 08:15:49] 2025-10-13 12:15:05,656 | INFO     | sum of square deviations: 141539398.0
[2025-10-13 08:15:49] 2025-10-13 12:15:05,657 | INFO     | sum of deviations: -11023888706.999994
[2025-10-13 08:15:49] 2025-10-13 12:15:05,657 | INFO     | mean x: 1760354702.0
[2025-10-13 08:15:49] 2025-10-13 12:15:05,657 | INFO     | mean y: 2613862.4415584416
[2025-10-13 08:15:49] 2025-10-13 12:15:05,657 | INFO     | -- intersect: 137108992679.25792
[2025-10-13 08:15:49] 2025-10-13 12:15:05,657 | INFO     | intersect: 137108992679.25792
[2025-10-13 08:15:49] 2025-10-13 12:15:05,658 | INFO     | chi2: 0.0760362713635673
[2025-10-13 08:15:49] 2025-10-13 12:15:05,658 | INFO     | -- intersect: 137108992679.25792
[2025-10-13 08:15:49] 2025-10-13 12:15:05,658 | INFO     | current memory leak: -77.89 B/s (using 77 data points, chi2=0.08)
[2025-10-13 08:15:49] 2025-10-13 12:15:05,658 | INFO     | could have reported an average CPU frequency of 1962 MHz (7 samples)
[2025-10-13 08:15:49] 2025-10-13 12:15:05,658 | INFO     | ..............................
[2025-10-13 08:15:49] 2025-10-13 12:15:05,658 | INFO     | . Timing measurements:
[2025-10-13 08:15:49] 2025-10-13 12:15:05,659 | INFO     | . get job = 0 s
[2025-10-13 08:15:49] 2025-10-13 12:15:05,659 | INFO     | . initial setup = 2 s
[2025-10-13 08:15:49] 2025-10-13 12:15:05,659 | INFO     | . payload setup = 8 s
[2025-10-13 08:15:49] 2025-10-13 12:15:05,659 | INFO     | . stage-in = 0 s
[2025-10-13 08:15:49] 2025-10-13 12:15:05,659 | INFO     | . payload execution = 6533 s
[2025-10-13 08:15:49] 2025-10-13 12:15:05,659 | INFO     | . stage-out = 0 s
[2025-10-13 08:15:49] 2025-10-13 12:15:05,659 | INFO     | . log creation = 0 s
[2025-10-13 08:15:49] 2025-10-13 12:15:05,659 | INFO     | ..............................
[2025-10-13 08:15:49] 2025-10-13 12:15:05,989 | INFO     | 
[2025-10-13 08:15:49] 2025-10-13 12:15:05,990 | INFO     | job summary report
[2025-10-13 08:15:49] 2025-10-13 12:15:05,990 | INFO     | --------------------------------------------------
[2025-10-13 08:15:49] 2025-10-13 12:15:05,990 | INFO     | PanDA job id: 6831456723
[2025-10-13 08:15:49] 2025-10-13 12:15:05,990 | INFO     | task id: 46376905
[2025-10-13 08:15:49] 2025-10-13 12:15:05,991 | INFO     | errors: (none)
[2025-10-13 08:15:49] 2025-10-13 12:15:05,991 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:15:49] 2025-10-13 12:15:05,991 | INFO     | pilot state: finished 
[2025-10-13 08:15:49] 2025-10-13 12:15:05,991 | INFO     | transexitcode: 0
[2025-10-13 08:15:49] 2025-10-13 12:15:05,991 | INFO     | exeerrorcode: 0
[2025-10-13 08:15:49] 2025-10-13 12:15:05,991 | INFO     | exeerrordiag: 
[2025-10-13 08:15:49] 2025-10-13 12:15:05,992 | INFO     | exitcode: 0
[2025-10-13 08:15:49] 2025-10-13 12:15:05,992 | INFO     | exitmsg: OK
[2025-10-13 08:15:49] 2025-10-13 12:15:05,992 | INFO     | cpuconsumptiontime: 48306 s
[2025-10-13 08:15:49] 2025-10-13 12:15:05,992 | INFO     | nevents: 400
[2025-10-13 08:15:49] 2025-10-13 12:15:05,992 | INFO     | neventsw: 0
[2025-10-13 08:15:49] 2025-10-13 12:15:05,992 | INFO     | pid: 8835
[2025-10-13 08:15:49] 2025-10-13 12:15:05,993 | INFO     | pgrp: 8835
[2025-10-13 08:15:49] 2025-10-13 12:15:05,993 | INFO     | corecount: 8
[2025-10-13 08:15:49] 2025-10-13 12:15:05,993 | INFO     | event service: False
[2025-10-13 08:15:49] 2025-10-13 12:15:05,993 | INFO     | sizes: {0: 2348816, 6: 2349078, 11: 2349106, 6544: 2376155, 6545: 2376154, 6546: 2385208, 6547: 2385392, 6555: 2385586}
[2025-10-13 08:15:49] 2025-10-13 12:15:05,993 | INFO     | --------------------------------------------------
[2025-10-13 08:15:49] 2025-10-13 12:15:05,993 | INFO     | 
[2025-10-13 08:15:49] 2025-10-13 12:15:05,994 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 08:15:49] 2025-10-13 12:15:06,025 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:15:49] 2025-10-13 12:15:06,025 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:15:49] 2025-10-13 12:15:06,025 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:15:49] 2025-10-13 12:15:06,026 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:15:49] 2025-10-13 12:15:06,026 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:15:49] 2025-10-13 12:15:06,026 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:15:49] 2025-10-13 12:15:06,026 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:15:49] 2025-10-13 12:15:06,026 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:15:49] 2025-10-13 12:15:06,027 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:15:49] 2025-10-13 12:15:06,027 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:15:49] 2025-10-13 12:15:06,027 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:15:49] 2025-10-13 12:15:06,027 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:15:49] 2025-10-13 12:15:06,027 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:15:49] 2025-10-13 12:15:06,027 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:15:49] 2025-10-13 12:15:06,028 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:15:49] 2025-10-13 12:15:06,028 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:15:49] 2025-10-13 12:15:06,028 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:15:49] 2025-10-13 12:15:06,028 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:15:49] 2025-10-13 12:15:06,028 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:15:49] 2025-10-13 12:15:06,028 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:15:49] 2025-10-13 12:15:06,029 | INFO     | job 6831456723 has completed (purged errors)
[2025-10-13 08:15:49] 2025-10-13 12:15:06,029 | INFO     | overall cleanup function is called
[2025-10-13 08:15:49] 2025-10-13 12:15:07,037 | INFO     | --- collectZombieJob: --- 10, [8835]
[2025-10-13 08:15:49] 2025-10-13 12:15:07,037 | INFO     | zombie collector waiting for pid 8835
[2025-10-13 08:15:49] 2025-10-13 12:15:07,037 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:15:49] 2025-10-13 12:15:07,038 | INFO     | collected zombie processes
[2025-10-13 08:15:49] 2025-10-13 12:15:07,038 | INFO     | will attempt to kill all subprocesses of pid=8835
[2025-10-13 08:15:49] 2025-10-13 12:15:07,127 | INFO     | process IDs to be killed: [8835] (in reverse order)
[2025-10-13 08:15:49] 2025-10-13 12:15:07,184 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:15:49] 2025-10-13 12:15:07,185 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:15:49] 2025-10-13 12:15:07,189 | INFO     | did not find any defunct processes belonging to 8835
[2025-10-13 08:15:49] 2025-10-13 12:15:07,192 | INFO     | did not find any defunct processes belonging to 8835
[2025-10-13 08:15:49] 2025-10-13 12:15:07,192 | INFO     | ready for new job
[2025-10-13 08:15:49] 2025-10-13 12:15:07,192 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:15:49] 2025-10-13 12:15:07,194 | INFO     | ***************************************
[2025-10-13 08:15:49] 2025-10-13 12:15:07,194 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 08:15:49] 2025-10-13 12:15:07,195 | INFO     | ***************************************
[2025-10-13 08:15:49] 2025-10-13 12:15:07,195 | INFO     | 
[2025-10-13 08:15:49] 2025-10-13 12:15:07,195 | INFO     | architecture information:
[2025-10-13 08:15:49] 2025-10-13 12:15:07,196 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:15:49] 2025-10-13 12:15:07,215 | INFO     | cat /etc/os-release:
[2025-10-13 08:15:49] NAME="CentOS Linux"
[2025-10-13 08:15:49] VERSION="7 (Core)"
[2025-10-13 08:15:49] ID="centos"
[2025-10-13 08:15:49] ID_LIKE="rhel fedora"
[2025-10-13 08:15:49] VERSION_ID="7"
[2025-10-13 08:15:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:15:49] ANSI_COLOR="0;31"
[2025-10-13 08:15:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:15:49] HOME_URL="https://www.centos.org/"
[2025-10-13 08:15:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:15:49] 
[2025-10-13 08:15:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:15:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:15:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:15:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:15:49] 
[2025-10-13 08:15:49] 2025-10-13 12:15:07,216 | INFO     | ***************************************
[2025-10-13 08:15:49] 2025-10-13 12:15:07,718 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 08:15:49] 2025-10-13 12:15:07,738 | INFO     | sufficient remaining disk space (18581815296 B)
[2025-10-13 08:15:49] 2025-10-13 12:15:07,738 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:15:49] 2025-10-13 12:15:07,739 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:15:49] 2025-10-13 12:15:07,739 | INFO     | update_server=False
[2025-10-13 08:15:49] 2025-10-13 12:15:07,739 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:15:49] 2025-10-13 12:15:07,739 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:15:49] 2025-10-13 12:15:07,740 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:15:49] 2025-10-13 12:15:07,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:15:49] 2025-10-13 12:15:07,741 | INFO     | aborting loop
[2025-10-13 08:15:49] 2025-10-13 12:15:07,797 | INFO     | all job control threads have been joined
[2025-10-13 08:15:49] 2025-10-13 12:15:08,085 | INFO     | all data control threads have been joined
[2025-10-13 08:15:49] 2025-10-13 12:15:08,314 | INFO     | all payload control threads have been joined
[2025-10-13 08:15:49] 2025-10-13 12:15:08,745 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:15:49] 2025-10-13 12:15:08,745 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:15:49] 2025-10-13 12:15:08,746 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:15:49] 2025-10-13 12:15:08,802 | INFO     | [job] control thread has finished
[2025-10-13 08:15:49] 2025-10-13 12:15:08,876 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:15:49] 2025-10-13 12:15:09,086 | INFO     | [data] control thread has finished
[2025-10-13 08:15:49] 2025-10-13 12:15:09,135 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:15:49] 2025-10-13 12:15:09,281 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:15:49] 2025-10-13 12:15:09,315 | INFO     | [payload] control thread has finished
[2025-10-13 08:15:49] 2025-10-13 12:15:09,736 | INFO     | [job] validate thread has finished
[2025-10-13 08:15:49] 2025-10-13 12:15:09,745 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:15:49] 2025-10-13 12:15:09,839 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:15:49] 2025-10-13 12:15:09,903 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:15:49] 2025-10-13 12:15:09,930 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:15:49] 2025-10-13 12:15:10,145 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:15:49] 2025-10-13 12:15:12,882 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:15:49] 2025-10-13 12:15:18,076 | INFO     | job.realtimelogging is not enabled
[2025-10-13 08:15:49] 2025-10-13 12:15:19,081 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:15:49] 2025-10-13 12:15:37,749 | INFO     | PID=2375 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 08:15:49] 2025-10-13 12:15:37,750 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:15:49] 2025-10-13 12:15:37,750 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:15:49] 2025-10-13 12:15:37,750 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:15:49] 2025-10-13 12:15:43,705 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:15:49] 2025-10-13 12:15:44,587 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139941713192768)>', '<ExcThread(monitor, started 139940729956096)>']
[2025-10-13 08:15:49] 2025-10-13 12:15:44,786 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:15:49] 2025-10-13 12:15:44,787 | INFO     | [monitor] control thread has ended
[2025-10-13 08:15:49] 2025-10-13 12:15:49,594 | INFO     | all workflow threads have been joined
[2025-10-13 08:15:49] 2025-10-13 12:15:49,594 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:15:49] 2025-10-13 12:15:49,594 | INFO     | traces error code: 0
[2025-10-13 08:15:49] 2025-10-13 12:15:49,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:15:49] 2025-10-13 12:15:49,704 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:15:49] 2025-10-13 12:15:49,708 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:15:49] 2025-10-13 12:15:49,713 [wrapper] pilotpid: 2375
[2025-10-13 08:15:49] 2025-10-13 12:15:49,718 [wrapper] Pilot exit status: 0
[2025-10-13 08:15:49] 2025-10-13 12:15:49,737 [wrapper] pandaids: 6831456723
[2025-10-13 08:15:49] 2025-10-13 12:15:49,788 [wrapper] cleanup supervisor_pilot 24319 2376
[2025-10-13 08:15:49] 2025-10-13 12:15:49,793 [wrapper] Test setup, not cleaning
[2025-10-13 08:15:49] 2025-10-13 12:15:49,798 [wrapper] apfmon messages muted
[2025-10-13 08:15:49] 2025-10-13 12:15:49,803 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:15:49] 2025-10-13 12:15:49,808 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:15:49]  *** Error codes and diagnostics ***
[2025-10-13 08:15:49]     "exeErrorCode": 0,
[2025-10-13 08:15:49]     "exeErrorDiag": "",
[2025-10-13 08:15:49]     "pilotErrorCode": 0,
[2025-10-13 08:15:49]     "pilotErrorDiag": "",
[2025-10-13 08:15:49]  *** Listing of results directory ***
[2025-10-13 08:15:49] total 391576
[2025-10-13 08:15:49] -rw-r--r-- 1 boincer umatlas    552446 Oct  5 08:52 pilot3.tar.gz
[2025-10-13 08:15:49] -rw-r--r-- 1 boincer umatlas      5112 Oct  5 08:54 queuedata.json
[2025-10-13 08:15:49] -rwx------ 1 boincer umatlas     36292 Oct  5 08:55 runpilot2-wrapper.sh
[2025-10-13 08:15:49] -rw-r--r-- 1 boincer umatlas       100 Oct 13 06:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:15:49] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 06:25 run_atlas
[2025-10-13 08:15:49] -rw-r--r-- 1 boincer umatlas       105 Oct 13 06:25 job.xml
[2025-10-13 08:15:49] -rw-r--r-- 2 boincer umatlas 213250736 Oct 13 06:25 EVNT.46376901._003109.pool.root.1
[2025-10-13 08:15:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 06:25 start_atlas.sh
[2025-10-13 08:15:49] drwxrwx--x 2 boincer umatlas      4096 Oct 13 06:25 shared
[2025-10-13 08:15:49] -rw-r--r-- 2 boincer umatlas    565604 Oct 13 06:25 input.tar.gz
[2025-10-13 08:15:49] -rw-r--r-- 1 boincer umatlas         0 Oct 13 06:25 boinc_lockfile
[2025-10-13 08:15:49] -rw-r--r-- 1 boincer umatlas      2519 Oct 13 06:25 pandaJob.out
[2025-10-13 08:15:49] -rw------- 1 boincer umatlas    972497 Oct 13 06:25 agis_schedconf.cvmfs.json
[2025-10-13 08:15:49] -rw------- 1 boincer umatlas   1560580 Oct 13 06:25 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:15:49] drwx------ 4 boincer umatlas      4096 Oct 13 06:25 pilot3
[2025-10-13 08:15:49] -rw-r--r-- 1 boincer umatlas      5909 Oct 13 08:13 init_data.xml
[2025-10-13 08:15:49] -rw------- 1 boincer umatlas 181273574 Oct 13 08:14 HITS.46376905._084688.pool.root.1
[2025-10-13 08:15:49] -rw-r--r-- 1 boincer umatlas       529 Oct 13 08:14 boinc_task_state.xml
[2025-10-13 08:15:49] -rw------- 1 boincer umatlas      1051 Oct 13 08:14 memory_monitor_summary.json
[2025-10-13 08:15:49] -rw------- 1 boincer umatlas    353580 Oct 13 08:14 log.46376905._084688.job.log.tgz.1
[2025-10-13 08:15:49] -rw------- 1 boincer umatlas      7853 Oct 13 08:15 heartbeat.json
[2025-10-13 08:15:49] -rw------- 1 boincer umatlas        95 Oct 13 08:15 pilot_heartbeat.json
[2025-10-13 08:15:49] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 08:15 boinc_mmap_file
[2025-10-13 08:15:49] -rw-r--r-- 1 boincer umatlas        27 Oct 13 08:15 wrapper_checkpoint.txt
[2025-10-13 08:15:49] -rw------- 1 boincer umatlas      4817 Oct 13 08:15 pilotlog.txt
[2025-10-13 08:15:49] -rw------- 1 boincer umatlas    923224 Oct 13 08:15 log.46376905._084688.job.log.1
[2025-10-13 08:15:49] -rw------- 1 boincer umatlas       357 Oct 13 08:15 output.list
[2025-10-13 08:15:49] -rw-r--r-- 1 boincer umatlas       620 Oct 13 08:15 runtime_log
[2025-10-13 08:15:49] -rw------- 1 boincer umatlas   1300480 Oct 13 08:15 result.tar.gz
[2025-10-13 08:15:49] -rw------- 1 boincer umatlas       659 Oct 13 08:15 VG4NDmjRdP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5KPNDmfSNuqn.diag
[2025-10-13 08:15:49] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 08:15 runtime_log.err
[2025-10-13 08:15:49] -rw-r--r-- 1 boincer umatlas     20845 Oct 13 08:15 stderr.txt
[2025-10-13 08:15:49] HITS file was successfully produced:
[2025-10-13 08:15:49] -rw------- 1 boincer umatlas 181273574 Oct 13 08:14 shared/HITS.pool.root.1
[2025-10-13 08:15:49]  *** Contents of shared directory: ***
[2025-10-13 08:15:49] total 387132
[2025-10-13 08:15:49] -rw-r--r-- 2 boincer umatlas 213250736 Oct 13 06:25 ATLAS.root_0
[2025-10-13 08:15:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 06:25 start_atlas.sh
[2025-10-13 08:15:49] -rw-r--r-- 2 boincer umatlas    565604 Oct 13 06:25 input.tar.gz
[2025-10-13 08:15:49] -rw------- 1 boincer umatlas 181273574 Oct 13 08:14 HITS.pool.root.1
[2025-10-13 08:15:49] -rw------- 1 boincer umatlas   1300480 Oct 13 08:15 result.tar.gz
08:15:51 (31058): run_atlas exited; CPU time 48327.089619
08:15:51 (31058): called boinc_finish(0)

</stderr_txt>
]]>

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